ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart49b03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK106143.1| Oryza sativa (japonica cultivar-group) cDNA clon... 121 3e-24
2dbj|AK104374.1| Oryza sativa (japonica cultivar-group) cDNA clon... 121 3e-24
3dbj|AK101500.1| Oryza sativa (japonica cultivar-group) cDNA clon... 121 3e-24
4dbj|AK071579.1| Oryza sativa (japonica cultivar-group) cDNA clon... 121 3e-24
5emb|AL939112.1|SCO939112 Streptomyces coelicolor A3(2) complete ... 44 0.53
6gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 44 0.53
7ref|XM_623715.1| PREDICTED: Apis mellifera similar to MYC bindin... 44 0.53
8emb|AM055943.1| Toxoplasma gondii, strain RH, genomic DNA chromo... 44 0.53
9dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, comp... 44 0.53
10ref|XM_531009.1| PREDICTED: Pan troglodytes LOC463304 (LOC463304... 42 2.1
11ref|XM_477616.1| Oryza sativa (japonica cultivar-group), mRNA 42 2.1
12gb|CP000144.1| Rhodobacter sphaeroides 2.4.1 chromosome 2, compl... 42 2.1
13gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, compl... 42 2.1
14gb|AC126441.5| Mus musculus BAC clone RP23-431D8 from chromosome... 42 2.1
15emb|AJ307670.1|MMU307670 Mus musculus St5 gene, L27a gene and Ki... 42 2.1
16dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.1
17dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.1
18dbj|AP003946.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.1
19dbj|AP004991.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.1
20dbj|AP006343.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.1
21dbj|AP006529.2| Oryza sativa (japonica cultivar-group) genomic D... 42 2.1
22dbj|AK102162.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.1
23ref|XM_550375.1| Oryza sativa (japonica cultivar-group), mRNA 40 8.3
24ref|XM_475686.1| Oryza sativa (japonica cultivar-group), predic... 40 8.3
25ref|XM_468477.1| Oryza sativa (japonica cultivar-group), mRNA 40 8.3
26ref|XM_464515.1| Oryza sativa (japonica cultivar-group), mRNA 40 8.3
27ref|XM_477617.1| Oryza sativa (japonica cultivar-group), mRNA 40 8.3
28gb|AC145383.3| Oryza sativa chromosome 3 BAC OSJNBa0038E17 genom... 40 8.3
29gb|BC080567.1| Homo sapiens cDNA clone IMAGE:6536768 40 8.3
30gb|AC150912.3| Pan troglodytes BAC clone CH251-18B3 from chromos... 40 8.3
31gb|AC161821.4| Pan troglodytes BAC clone CH251-507E3 from chromo... 40 8.3
32gb|AC108873.2| Oryza sativa (japonica cultivar-group) chromosome... 40 8.3
33gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 8.3
34ref|XM_387351.1| Gibberella zeae PH-1 chromosome 4 conserved hyp... 40 8.3
35gb|AC004969.1| Homo sapiens PAC clone RP5-1121E10 from 7, comple... 40 8.3
36gb|AY358596.1| Homo sapiens clone DNA64885 Bone Rel Sulphatase (... 40 8.3
37gb|AC116129.13| Mus musculus chromosome 1, clone RP23-98F11, com... 40 8.3
38gb|AC142337.1| Pan troglodytes BAC clone RP43-39F23 from 7, comp... 40 8.3
39gb|BC015723.2| Homo sapiens cDNA clone IMAGE:3920449, partial cds 40 8.3
40gb|BC050392.1| Homo sapiens arylsulfatase family, member K, mRNA... 40 8.3
41gb|AC183606.2| Pan troglodytes BAC clone CH251-286M5 from chromo... 40 8.3
42emb|AL591985.1|RME591985 Sinorhizobium meliloti 1021 complete pSymB 40 8.3
43gb|AF538718.1| Homo sapiens replication factor C (activator 1) 4... 40 8.3
44dbj|AK061941.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.3
45ref|NM_198150.1| Homo sapiens arylsulfatase family, member K (AR... 40 8.3
46gb|DQ271239.1| Mustela vison clone III3K5 microsatellite sequence 40 8.3
47gb|AC090071.3| Homo sapiens chromosome 5 clone CTD-2538A21, comp... 40 8.3
48emb|AL732379.5|CNS08C92 Oryza sativa chromosome 3, . BAC OSJNBa0... 40 8.3
49gb|AC110002.2| Homo sapiens chromosome 5 clone RP11-125A13, comp... 40 8.3
50ref|XR_001280.1| PREDICTED: Homo sapiens hypothetical LOC554208,... 40 8.3
51gb|AC008547.6| Homo sapiens chromosome 5 clone CTC-502M5, comple... 40 8.3
52gb|AC161278.2| Pan troglodytes BAC clone CH251-486B7 from chromo... 40 8.3
53gb|AC004668.1| Homo sapiens BAC clone CTA-276O3 from 7, complete... 40 8.3
54gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome 40 8.3
55dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.3
56dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.3
57dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.3
58gb|AC112907.7| Homo sapiens 3 BAC RP11-573D15 (Roswell Park Canc... 40 8.3
59gb|AC074096.8| Homo sapiens BAC clone RP11-328L16 from 2, comple... 40 8.3
60gb|AC116554.26| Mus musculus strain C57BL/6J chromosome 1 clone ... 40 8.3
61gb|AC005826.1|AC005826 Homo sapiens clone SCb-41A3 from 7p14-15,... 40 8.3
62dbj|AP002864.2| Oryza sativa (japonica cultivar-group) genomic D... 40 8.3
63dbj|AB023482.2| Oryza sativa (japonica cultivar-group) genomic D... 40 8.3
64dbj|AP003629.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.3
65dbj|AP003989.4| Oryza sativa (japonica cultivar-group) genomic D... 40 8.3
66dbj|AP004869.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.3
67dbj|AK098759.1| Homo sapiens cDNA FLJ25893 fis, clone CBR03492 40 8.3
68dbj|AK103637.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.3
69dbj|AK101305.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.3
70gb|AC006379.2|AC006379 Homo sapiens BAC clone RP11-456N16 from 7... 40 8.3
71dbj|AK072274.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.3
72dbj|AK068685.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.3
73emb|Z64709.1|HS15G4F H.sapiens CpG island DNA genomic Mse1 fragm... 40 8.3
74dbj|AK065140.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.3
75dbj|AK065056.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.3
76dbj|AK064800.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.3
77dbj|AK059170.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.3
78emb|AL772312.6| Mouse DNA sequence from clone RP23-91D16 on chro... 40 8.3 
>dbj|AK106143.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-G11, full
           insert sequence
          Length = 1949

 Score =  121 bits (61), Expect = 3e-24
 Identities = 97/109 (88%)
 Strand = Plus / Plus

                                                                       
Query: 175 tggacgccgcgctctgcgacgacctgctgcaggaggtgttccgcctgctcccgcccgccg 234
           ||||||| ||||| ||||||||||||||||||||||||||||||||||| |||| |||| 
Sbjct: 194 tggacgcggcgctgtgcgacgacctgctgcaggaggtgttccgcctgctgccgcgcgcct 253

                                                            
Query: 235 ccgggccagccgtctccctcgtctcccgccgctgggtcgcgctcctccg 283
           ||| ||| || || |||||||||||||||||||||  ||| ||||||||
Sbjct: 254 ccgcgccggctgtgtccctcgtctcccgccgctggtacgccctcctccg 302
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>dbj|AK104374.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-G01, full
           insert sequence
          Length = 1949

 Score =  121 bits (61), Expect = 3e-24
 Identities = 97/109 (88%)
 Strand = Plus / Plus

                                                                       
Query: 175 tggacgccgcgctctgcgacgacctgctgcaggaggtgttccgcctgctcccgcccgccg 234
           ||||||| ||||| ||||||||||||||||||||||||||||||||||| |||| |||| 
Sbjct: 194 tggacgcggcgctgtgcgacgacctgctgcaggaggtgttccgcctgctgccgcgcgcct 253

                                                            
Query: 235 ccgggccagccgtctccctcgtctcccgccgctgggtcgcgctcctccg 283
           ||| ||| || || |||||||||||||||||||||  ||| ||||||||
Sbjct: 254 ccgcgccggctgtgtccctcgtctcccgccgctggtacgccctcctccg 302
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>dbj|AK101500.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033043P15, full
           insert sequence
          Length = 1922

 Score =  121 bits (61), Expect = 3e-24
 Identities = 97/109 (88%)
 Strand = Plus / Plus

                                                                       
Query: 175 tggacgccgcgctctgcgacgacctgctgcaggaggtgttccgcctgctcccgcccgccg 234
           ||||||| ||||| ||||||||||||||||||||||||||||||||||| |||| |||| 
Sbjct: 180 tggacgcggcgctgtgcgacgacctgctgcaggaggtgttccgcctgctgccgcgcgcct 239

                                                            
Query: 235 ccgggccagccgtctccctcgtctcccgccgctgggtcgcgctcctccg 283
           ||| ||| || || |||||||||||||||||||||  ||| ||||||||
Sbjct: 240 ccgcgccggctgtgtccctcgtctcccgccgctggtacgccctcctccg 288
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>dbj|AK071579.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023102O20, full
           insert sequence
          Length = 1943

 Score =  121 bits (61), Expect = 3e-24
 Identities = 97/109 (88%)
 Strand = Plus / Plus

                                                                       
Query: 175 tggacgccgcgctctgcgacgacctgctgcaggaggtgttccgcctgctcccgcccgccg 234
           ||||||| ||||| ||||||||||||||||||||||||||||||||||| |||| |||| 
Sbjct: 201 tggacgcggcgctgtgcgacgacctgctgcaggaggtgttccgcctgctgccgcgcgcct 260

                                                            
Query: 235 ccgggccagccgtctccctcgtctcccgccgctgggtcgcgctcctccg 283
           ||| ||| || || |||||||||||||||||||||  ||| ||||||||
Sbjct: 261 ccgcgccggctgtgtccctcgtctcccgccgctggtacgccctcctccg 309
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>emb|AL939112.1|SCO939112 Streptomyces coelicolor A3(2) complete genome; segment 9/29
          Length = 300800

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 179    cgccgcgctctgcgacgacctg 200
              ||||||||||||||||||||||
Sbjct: 295356 cgccgcgctctgcgacgacctg 295335
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>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 313     tgccgccggccttcgccggagc 334
               ||||||||||||||||||||||
Sbjct: 2903460 tgccgccggccttcgccggagc 2903481
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>ref|XM_623715.1| PREDICTED: Apis mellifera similar to MYC binding protein 2
            (LOC551317), mRNA
          Length = 7362

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 453  gcctcgccctcggccacccggc 474
            ||||||||||||||||||||||
Sbjct: 1262 gcctcgccctcggccacccggc 1241
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>emb|AM055943.1| Toxoplasma gondii, strain RH, genomic DNA chromosome Ib
          Length = 2013089

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 245    cgtctccctcgtctcccgccgc 266
              ||||||||||||||||||||||
Sbjct: 166373 cgtctccctcgtctcccgccgc 166352
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>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 449    gtccgcctcgccctcggccacc 470
              ||||||||||||||||||||||
Sbjct: 549539 gtccgcctcgccctcggccacc 549518
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>ref|XM_531009.1| PREDICTED: Pan troglodytes LOC463304 (LOC463304), mRNA
          Length = 1292

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 214 tccgcctgctcccgcccgccg 234
           |||||||||||||||||||||
Sbjct: 669 tccgcctgctcccgcccgccg 689
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>ref|XM_477616.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1982

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 454 cctcgccctcggccacccggc 474
           |||||||||||||||||||||
Sbjct: 5   cctcgccctcggccacccggc 25
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>gb|CP000144.1| Rhodobacter sphaeroides 2.4.1 chromosome 2, complete genome
          Length = 943016

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 309    cgcctgccgccggccttcgcc 329
              |||||||||||||||||||||
Sbjct: 804381 cgcctgccgccggccttcgcc 804401
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>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome
          Length = 3188609

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 450     tccgcctcgccctcggccacc 470
               |||||||||||||||||||||
Sbjct: 3130795 tccgcctcgccctcggccacc 3130815
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>gb|AC126441.5| Mus musculus BAC clone RP23-431D8 from chromosome 7, complete sequence
          Length = 220308

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 552    ctcacctcgctccacctcacc 572
              |||||||||||||||||||||
Sbjct: 146039 ctcacctcgctccacctcacc 146059
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>emb|AJ307670.1|MMU307670 Mus musculus St5 gene, L27a gene and Kiaa0298 gene
          Length = 202748

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 552   ctcacctcgctccacctcacc 572
             |||||||||||||||||||||
Sbjct: 39331 ctcacctcgctccacctcacc 39311
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 454      cctcgccctcggccacccggc 474
                |||||||||||||||||||||
Sbjct: 11905491 cctcgccctcggccacccggc 11905471
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 11      ccacctgaggccgccgagcagccca 35
               ||||||||||||||||||| |||||
Sbjct: 5164072 ccacctgaggccgccgagctgccca 5164096



 Score = 40.1 bits (20), Expect = 8.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                            
Query: 254      cgtctcccgccgctgggtcgcgctcctc 281
                |||||||||||||||| |||| ||||||
Sbjct: 23650664 cgtctcccgccgctggctcgctctcctc 23650691



 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 172     acctggacgccgcgctctgc 191
               ||||||||||||||||||||
Sbjct: 3455178 acctggacgccgcgctctgc 3455159
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>dbj|AP003946.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:OJ1147_D11
          Length = 138444

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 11     ccacctgaggccgccgagcagccca 35
              ||||||||||||||||||| |||||
Sbjct: 123110 ccacctgaggccgccgagctgccca 123134
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>dbj|AP004991.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0016O19
          Length = 169120

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 11    ccacctgaggccgccgagcagccca 35
             ||||||||||||||||||| |||||
Sbjct: 30794 ccacctgaggccgccgagctgccca 30818
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>dbj|AP006343.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:B1032F05
          Length = 151412

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 454    cctcgccctcggccacccggc 474
              |||||||||||||||||||||
Sbjct: 137791 cctcgccctcggccacccggc 137771
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>dbj|AP006529.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:B1114D08
          Length = 148354

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 454   cctcgccctcggccacccggc 474
             |||||||||||||||||||||
Sbjct: 36532 cctcgccctcggccacccggc 36512
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>dbj|AK102162.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033086G22, full
           insert sequence
          Length = 1983

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 454 cctcgccctcggccacccggc 474
           |||||||||||||||||||||
Sbjct: 5   cctcgccctcggccacccggc 25
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>ref|XM_550375.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 992

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 172 acctggacgccgcgctctgc 191
           ||||||||||||||||||||
Sbjct: 627 acctggacgccgcgctctgc 646
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>ref|XM_475686.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1239

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 248 ctccctcgtctcccgccgct 267
           ||||||||||||||||||||
Sbjct: 177 ctccctcgtctcccgccgct 196
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>ref|XM_468477.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 657

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 243 gccgtctccctcgtctcccgccgc 266
           |||||| |||||||||||||||||
Sbjct: 598 gccgtcgccctcgtctcccgccgc 621
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>ref|XM_464515.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2981

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 254 cgtctcccgccgctgggtcgcgctcctc 281
           |||||||||||||||| |||| ||||||
Sbjct: 489 cgtctcccgccgctggctcgccctcctc 516
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>ref|XM_477617.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1991

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 455 ctcgccctcggccacccggc 474
           ||||||||||||||||||||
Sbjct: 1   ctcgccctcggccacccggc 20
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>gb|AC145383.3| Oryza sativa chromosome 3 BAC OSJNBa0038E17 genomic sequence, complete
             sequence
          Length = 141691

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 243   gccgtctccctcgtctcccgccgc 266
             |||||||||||| |||||||||||
Sbjct: 53961 gccgtctccctcttctcccgccgc 53938
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>gb|BC080567.1| Homo sapiens cDNA clone IMAGE:6536768
          Length = 1071

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 231 gccgccgggccagccgtctccctc 254
           |||||||||||||||| |||||||
Sbjct: 65  gccgccgggccagccgcctccctc 42
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>gb|AC150912.3| Pan troglodytes BAC clone CH251-18B3 from chromosome 7, complete sequence
          Length = 170021

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 34     caattcccctggagagagaa 53
              ||||||||||||||||||||
Sbjct: 166717 caattcccctggagagagaa 166736
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>gb|AC161821.4| Pan troglodytes BAC clone CH251-507E3 from chromosome 7, complete
              sequence
          Length = 211131

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 34     caattcccctggagagagaa 53
              ||||||||||||||||||||
Sbjct: 198837 caattcccctggagagagaa 198818
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>gb|AC108873.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1005_B11,
             complete sequence
          Length = 162772

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 248   ctccctcgtctcccgccgct 267
             ||||||||||||||||||||
Sbjct: 25706 ctccctcgtctcccgccgct 25725
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 243      gccgtctccctcgtctcccgccgc 266
                |||||||||||| |||||||||||
Sbjct: 24678414 gccgtctccctcttctcccgccgc 24678391
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>ref|XM_387351.1| Gibberella zeae PH-1 chromosome 4 conserved hypothetical protein
           (FG07175.1) partial mRNA
          Length = 3315

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 249 tccctcgtctcccgccgctg 268
           ||||||||||||||||||||
Sbjct: 108 tccctcgtctcccgccgctg 127
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>gb|AC004969.1| Homo sapiens PAC clone RP5-1121E10 from 7, complete sequence
          Length = 105247

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 34    caattcccctggagagagaa 53
             ||||||||||||||||||||
Sbjct: 18683 caattcccctggagagagaa 18664
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>gb|AY358596.1| Homo sapiens clone DNA64885 Bone Rel Sulphatase (UNQ630) mRNA,
           complete cds
          Length = 2476

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 231 gccgccgggccagccgtctccctc 254
           |||||||||||||||| |||||||
Sbjct: 94  gccgccgggccagccgcctccctc 71
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>gb|AC116129.13| Mus musculus chromosome 1, clone RP23-98F11, complete sequence
          Length = 216320

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 560    gctccacctcaccgctctcagccc 583
              |||||||||||| |||||||||||
Sbjct: 136473 gctccacctcacggctctcagccc 136496
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>gb|AC142337.1| Pan troglodytes BAC clone RP43-39F23 from 7, complete sequence
          Length = 157646

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 34    caattcccctggagagagaa 53
             ||||||||||||||||||||
Sbjct: 81216 caattcccctggagagagaa 81197
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>gb|BC015723.2| Homo sapiens cDNA clone IMAGE:3920449, partial cds
          Length = 1100

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 231 gccgccgggccagccgtctccctc 254
           |||||||||||||||| |||||||
Sbjct: 88  gccgccgggccagccgcctccctc 65
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>gb|BC050392.1| Homo sapiens arylsulfatase family, member K, mRNA (cDNA clone
           IMAGE:5759220), partial cds
          Length = 1735

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 231 gccgccgggccagccgtctccctc 254
           |||||||||||||||| |||||||
Sbjct: 93  gccgccgggccagccgcctccctc 70
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>gb|AC183606.2| Pan troglodytes BAC clone CH251-286M5 from chromosome 12, complete
              sequence
          Length = 171738

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 34     caattcccctggagagagaa 53
              ||||||||||||||||||||
Sbjct: 141095 caattcccctggagagagaa 141114
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>emb|AL591985.1|RME591985 Sinorhizobium meliloti 1021 complete pSymB
          Length = 1683333

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                               
Query: 180     gccgcgctctgcgacgacctgctgcaggaggt 211
               |||||||||| ||||| ||| |||||||||||
Sbjct: 1215916 gccgcgctcttcgacggccttctgcaggaggt 1215885
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>gb|AF538718.1| Homo sapiens replication factor C (activator 1) 4 (37kD) (RFC4) gene,
             complete cds
          Length = 18960

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 286   cctccacgtcccgcctcaccctcc 309
             ||||||| ||||||||||||||||
Sbjct: 16276 cctccacctcccgcctcaccctcc 16299
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>dbj|AK061941.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-D10, full
           insert sequence
          Length = 1991

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 455 ctcgccctcggccacccggc 474
           ||||||||||||||||||||
Sbjct: 1   ctcgccctcggccacccggc 20
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>ref|NM_198150.1| Homo sapiens arylsulfatase family, member K (ARSK), mRNA
          Length = 2476

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 231 gccgccgggccagccgtctccctc 254
           |||||||||||||||| |||||||
Sbjct: 94  gccgccgggccagccgcctccctc 71
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>gb|DQ271239.1| Mustela vison clone III3K5 microsatellite sequence
          Length = 852

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 559 cgctccacctcaccgctctcagcc 582
           |||||||| |||||||||||||||
Sbjct: 588 cgctccacttcaccgctctcagcc 611
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>gb|AC090071.3| Homo sapiens chromosome 5 clone CTD-2538A21, complete sequence
          Length = 197810

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 231    gccgccgggccagccgtctccctc 254
              |||||||||||||||| |||||||
Sbjct: 177427 gccgccgggccagccgcctccctc 177404
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>emb|AL732379.5|CNS08C92 Oryza sativa chromosome 3, . BAC OSJNBa0025B02 of library OSJNBa from
              chromosome 3 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 136470

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 243    gccgtctccctcgtctcccgccgc 266
              |||||||||||| |||||||||||
Sbjct: 109725 gccgtctccctcttctcccgccgc 109702
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>gb|AC110002.2| Homo sapiens chromosome 5 clone RP11-125A13, complete sequence
          Length = 168708

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 231    gccgccgggccagccgtctccctc 254
              |||||||||||||||| |||||||
Sbjct: 123129 gccgccgggccagccgcctccctc 123152
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>ref|XR_001280.1| PREDICTED: Homo sapiens hypothetical LOC554208, transcript variant 2
            (LOC554208), misc RNA
          Length = 2610

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 34   caattcccctggagagagaa 53
            ||||||||||||||||||||
Sbjct: 1937 caattcccctggagagagaa 1918
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>gb|AC008547.6| Homo sapiens chromosome 5 clone CTC-502M5, complete sequence
          Length = 114005

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 231 gccgccgggccagccgtctccctc 254
           |||||||||||||||| |||||||
Sbjct: 79  gccgccgggccagccgcctccctc 56
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>gb|AC161278.2| Pan troglodytes BAC clone CH251-486B7 from chromosome 7, complete
              sequence
          Length = 211383

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 34     caattcccctggagagagaa 53
              ||||||||||||||||||||
Sbjct: 175663 caattcccctggagagagaa 175682
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>gb|AC004668.1| Homo sapiens BAC clone CTA-276O3 from 7, complete sequence
          Length = 112661

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 34    caattcccctggagagagaa 53
             ||||||||||||||||||||
Sbjct: 76420 caattcccctggagagagaa 76401
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>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome
          Length = 4352825

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 452     cgcctcgccctcggccaccc 471
               ||||||||||||||||||||
Sbjct: 2195051 cgcctcgccctcggccaccc 2195070
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 248      ctccctcgtctcccgccgct 267
                ||||||||||||||||||||
Sbjct: 25083051 ctccctcgtctcccgccgct 25083070
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 243      gccgtctccctcgtctcccgccgc 266
                |||||||||||| |||||||||||
Sbjct: 24595244 gccgtctccctcttctcccgccgc 24595221
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 243      gccgtctccctcgtctcccgccgc 266
                |||||| |||||||||||||||||
Sbjct: 35444870 gccgtcgccctcgtctcccgccgc 35444847



 Score = 40.1 bits (20), Expect = 8.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 254     cgtctcccgccgctgggtcgcgctcctc 281
               |||||||||||||||| |||| ||||||
Sbjct: 5630614 cgtctcccgccgctggctcgccctcctc 5630587
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>gb|AC112907.7| Homo sapiens 3 BAC RP11-573D15 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 132875

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 286   cctccacgtcccgcctcaccctcc 309
             ||||||| ||||||||||||||||
Sbjct: 58132 cctccacctcccgcctcaccctcc 58155
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>gb|AC074096.8| Homo sapiens BAC clone RP11-328L16 from 2, complete sequence
          Length = 192649

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 41    cctggagagagaaaacaggg 60
             ||||||||||||||||||||
Sbjct: 65267 cctggagagagaaaacaggg 65286
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>gb|AC116554.26| Mus musculus strain C57BL/6J chromosome 1 clone rp23-139k14, complete
             sequence
          Length = 240923

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 560   gctccacctcaccgctctcagccc 583
             |||||||||||| |||||||||||
Sbjct: 63279 gctccacctcacggctctcagccc 63302
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>gb|AC005826.1|AC005826 Homo sapiens clone SCb-41A3 from 7p14-15, complete sequence
          Length = 177585

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 34    caattcccctggagagagaa 53
             ||||||||||||||||||||
Sbjct: 82331 caattcccctggagagagaa 82350
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>dbj|AP002864.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0033B09
          Length = 143545

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 172   acctggacgccgcgctctgc 191
             ||||||||||||||||||||
Sbjct: 71882 acctggacgccgcgctctgc 71863
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>dbj|AB023482.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, clone
              P0680A03
          Length = 156054

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 172    acctggacgccgcgctctgc 191
              ||||||||||||||||||||
Sbjct: 146732 acctggacgccgcgctctgc 146713
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>dbj|AP003629.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0481H08
          Length = 146841

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 254    cgtctcccgccgctgggtcgcgctcctc 281
              |||||||||||||||| |||| ||||||
Sbjct: 131628 cgtctcccgccgctggctcgctctcctc 131655
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>dbj|AP003989.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1063_D06
          Length = 102439

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 243   gccgtctccctcgtctcccgccgc 266
             |||||| |||||||||||||||||
Sbjct: 56391 gccgtcgccctcgtctcccgccgc 56368
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>dbj|AP004869.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0419A09
          Length = 168064

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 254   cgtctcccgccgctgggtcgcgctcctc 281
             |||||||||||||||| |||| ||||||
Sbjct: 58350 cgtctcccgccgctggctcgccctcctc 58323
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>dbj|AK098759.1| Homo sapiens cDNA FLJ25893 fis, clone CBR03492
          Length = 2344

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 34   caattcccctggagagagaa 53
            ||||||||||||||||||||
Sbjct: 1944 caattcccctggagagagaa 1925
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>dbj|AK103637.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033134F12, full
           insert sequence
          Length = 1013

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 172 acctggacgccgcgctctgc 191
           ||||||||||||||||||||
Sbjct: 627 acctggacgccgcgctctgc 646
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>dbj|AK101305.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033033M04, full
           insert sequence
          Length = 992

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 172 acctggacgccgcgctctgc 191
           ||||||||||||||||||||
Sbjct: 627 acctggacgccgcgctctgc 646
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>gb|AC006379.2|AC006379 Homo sapiens BAC clone RP11-456N16 from 7p15.1-p13, complete sequence
          Length = 202719

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 34     caattcccctggagagagaa 53
              ||||||||||||||||||||
Sbjct: 131881 caattcccctggagagagaa 131900
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>dbj|AK072274.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023008A21, full
           insert sequence
          Length = 3534

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 248 ctccctcgtctcccgccgct 267
           ||||||||||||||||||||
Sbjct: 257 ctccctcgtctcccgccgct 276
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>dbj|AK068685.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013161L06, full
           insert sequence
          Length = 1878

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 248 ctccctcgtctcccgccgct 267
           ||||||||||||||||||||
Sbjct: 257 ctccctcgtctcccgccgct 276
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>emb|Z64709.1|HS15G4F H.sapiens CpG island DNA genomic Mse1 fragment, clone 15g4, forward
           read cpg15g4.ft1b
          Length = 220

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 231 gccgccgggccagccgtctccctc 254
           |||||||||||||||| |||||||
Sbjct: 95  gccgccgggccagccgcctccctc 72
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>dbj|AK065140.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002A13, full
           insert sequence
          Length = 2793

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 254 cgtctcccgccgctgggtcgcgctcctc 281
           |||||||||||||||| |||| ||||||
Sbjct: 431 cgtctcccgccgctggctcgctctcctc 458
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>dbj|AK065056.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001J06, full
           insert sequence
          Length = 6528

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 254 cgtctcccgccgctgggtcgcgctcctc 281
           |||||||||||||||| |||| ||||||
Sbjct: 486 cgtctcccgccgctggctcgccctcctc 513
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>dbj|AK064800.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000D06, full
           insert sequence
          Length = 2981

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 254 cgtctcccgccgctgggtcgcgctcctc 281
           |||||||||||||||| |||| ||||||
Sbjct: 489 cgtctcccgccgctggctcgccctcctc 516
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>dbj|AK059170.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-023-E12, full
            insert sequence
          Length = 1384

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 172  acctggacgccgcgctctgc 191
            ||||||||||||||||||||
Sbjct: 1044 acctggacgccgcgctctgc 1063
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>emb|AL772312.6| Mouse DNA sequence from clone RP23-91D16 on chromosome 4, complete
             sequence
          Length = 183630

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 42    ctggagagagaaaacagggg 61
             ||||||||||||||||||||
Sbjct: 97826 ctggagagagaaaacagggg 97845


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,319,433
Number of Sequences: 3902068
Number of extensions: 3319433
Number of successful extensions: 81509
Number of sequences better than 10.0: 78
Number of HSP's better than 10.0 without gapping: 81
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 80335
Number of HSP's gapped (non-prelim): 1174
length of query: 608
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 585
effective length of database: 17,143,297,704
effective search space: 10028829156840
effective search space used: 10028829156840
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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