>gb|AY108102.1| Zea mays PCO073188 mRNA sequence
          Length = 408

 Score = 75.8 bits (38), Expect = 8e-11
 Identities = 104/126 (82%)
 Strand = Plus / Plus

                                                                       
Query: 19  ggcggtgacgctaatggccacggcggcggaggggtacatcactcagaagacgtgggcagc 78
           |||||||  ||| ||||| |||||| ||||||| | |||| |  |||||||||||   ||
Sbjct: 166 ggcggtggtgctcatggcaacggcgtcggagggcttcatctccaagaagacgtggagcgc 225

                                                                       
Query: 79  catccgccgggcgaaccgcgccgggccgttcgtcggcctcgtcgtgcccaacacctacga 138
           |||||| |||||| |||||| |||||| ||||| || || || ||||||||| |||||||
Sbjct: 226 catccggcgggcggaccgcgacgggcccttcgtggggctggtggtgcccaacgcctacga 285

                 
Query: 139 gatggt 144
           ||||||
Sbjct: 286 gatggt 291



 Score = 42.1 bits (21), Expect = 1.1
 Identities = 51/61 (83%)
 Strand = Plus / Plus

                                                                       
Query: 201 tccaagggcgaaggtttcgctttggaaccatcgaaggccaaagcgtcgtcatggtcatga 260
           ||||||||||| | || ||||| ||||| || | | |||||| ||| |||||||||||||
Sbjct: 348 tccaagggcgacgattccgcttcggaactattggaagccaaaacgttgtcatggtcatga 407

            
Query: 261 c 261
           |
Sbjct: 408 c 408

>ref|NM_188605.1| Oryza sativa (japonica cultivar-group), Ozsa8208 predicted mRNA
          Length = 996

 Score = 73.8 bits (37), Expect = 3e-10
 Identities = 97/115 (84%), Gaps = 4/115 (3%)
 Strand = Plus / Plus

                                                                       
Query: 32  atggccacggcggcggaggggtacatcactcagaagacgtgggcagccatccgccgggcg 91
           ||||| |||||||||||||||| |||| |   |||||||||| | ||| |||| ||||||
Sbjct: 43  atggcgacggcggcggaggggttcatctcggcgaagacgtggtcggccgtccggcgggcg 102

                                                                  
Query: 92  aac---cgcgccgggccgttcgtcggcctcgtcgtgcccaacacctacgagatgg 143
           |||   || | |||||||||||| ||| |||||||||||||| ||||||||||||
Sbjct: 103 aacgaccgtggcgggccgttcgtgggc-tcgtcgtgcccaacgcctacgagatgg 156



 Score = 48.1 bits (24), Expect = 0.017
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                               
Query: 281 gctggtctgaccacccagatgctgctgagcctgttc 316
           ||||| ||||| |||||| |||||||||||||||||
Sbjct: 229 gctgggctgacgacccagctgctgctgagcctgttc 264

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 73.8 bits (37), Expect = 3e-10
 Identities = 97/115 (84%), Gaps = 4/115 (3%)
 Strand = Plus / Minus

                                                                           
Query: 32      atggccacggcggcggaggggtacatcactcagaagacgtgggcagccatccgccgggcg 91
               ||||| |||||||||||||||| |||| |   |||||||||| | ||| |||| ||||||
Sbjct: 7187148 atggcgacggcggcggaggggttcatctcggcgaagacgtggtcggccgtccggcgggcg 7187089

                                                                      
Query: 92      aac---cgcgccgggccgttcgtcggcctcgtcgtgcccaacacctacgagatgg 143
               |||   || | |||||||||||| ||| |||||||||||||| ||||||||||||
Sbjct: 7187088 aacgaccgtggcgggccgttcgtgggc-tcgtcgtgcccaacgcctacgagatgg 7187035



 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 60/71 (84%)
 Strand = Plus / Minus

                                                                           
Query: 204     aagggcgaaggtttcgctttggaaccatcgaaggccaaagcgtcgtcatggtcatgacag 263
               |||| |||||||||||||| ||  |||| |  ||||||| ||| ||||||||||||||||
Sbjct: 7186079 aaggacgaaggtttcgcttcggtgccattgggggccaaaacgttgtcatggtcatgacag 7186020

                          
Query: 264     gactgagcatg 274
               | || ||||||
Sbjct: 7186019 ggcttagcatg 7186009



 Score = 48.1 bits (24), Expect = 0.017
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                   
Query: 281     gctggtctgaccacccagatgctgctgagcctgttc 316
               ||||| ||||| |||||| |||||||||||||||||
Sbjct: 7185808 gctgggctgacgacccagctgctgctgagcctgttc 7185773

>dbj|AP001859.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0485D09
          Length = 150594

 Score = 73.8 bits (37), Expect = 3e-10
 Identities = 97/115 (84%), Gaps = 4/115 (3%)
 Strand = Plus / Minus

                                                                         
Query: 32    atggccacggcggcggaggggtacatcactcagaagacgtgggcagccatccgccgggcg 91
             ||||| |||||||||||||||| |||| |   |||||||||| | ||| |||| ||||||
Sbjct: 81796 atggcgacggcggcggaggggttcatctcggcgaagacgtggtcggccgtccggcgggcg 81737

                                                                    
Query: 92    aac---cgcgccgggccgttcgtcggcctcgtcgtgcccaacacctacgagatgg 143
             |||   || | |||||||||||| ||| |||||||||||||| ||||||||||||
Sbjct: 81736 aacgaccgtggcgggccgttcgtgggc-tcgtcgtgcccaacgcctacgagatgg 81683



 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 60/71 (84%)
 Strand = Plus / Minus

                                                                         
Query: 204   aagggcgaaggtttcgctttggaaccatcgaaggccaaagcgtcgtcatggtcatgacag 263
             |||| |||||||||||||| ||  |||| |  ||||||| ||| ||||||||||||||||
Sbjct: 80727 aaggacgaaggtttcgcttcggtgccattgggggccaaaacgttgtcatggtcatgacag 80668

                        
Query: 264   gactgagcatg 274
             | || ||||||
Sbjct: 80667 ggcttagcatg 80657



 Score = 48.1 bits (24), Expect = 0.017
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                 
Query: 281   gctggtctgaccacccagatgctgctgagcctgttc 316
             ||||| ||||| |||||| |||||||||||||||||
Sbjct: 80456 gctgggctgacgacccagctgctgctgagcctgttc 80421

>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 48.1 bits (24), Expect = 0.017
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                           
Query: 104     ccgttcgtcggcctcgtcgtgcccaaca 131
               |||||||||||||||||||| |||||||
Sbjct: 4982931 ccgttcgtcggcctcgtcgtccccaaca 4982958

>gb|AC108761.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone
              OSJNBa0087J09, complete sequence
          Length = 153351

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                            
Query: 18     tggcggtgacgctaatggccacggcggcgg 47
              ||||||| ||||||||||||| ||||||||
Sbjct: 128654 tggcggtcacgctaatggccaaggcggcgg 128683

>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                              
Query: 18       tggcggtgacgctaatggccacggcggcgg 47
                ||||||| ||||||||||||| ||||||||
Sbjct: 18486224 tggcggtcacgctaatggccaaggcggcgg 18486253

>gb|DQ118863.1| Streptomyces fradiae strain NRRL18158 lipopeptide antibiotic A54145
             biosynthetic gene cluster, complete sequence
          Length = 126933

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 33    tggccacggcggcggaggggt 53
             |||||||||||||||||||||
Sbjct: 27070 tggccacggcggcggaggggt 27090

>gb|AC123528.2| Oryza sativa chromosome 11 clone  OSJNBa0078E03, complete sequence
          Length = 149493

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 34     ggccacggcggcggaggggt 53
              ||||||||||||||||||||
Sbjct: 122382 ggccacggcggcggaggggt 122401



 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 34     ggccacggcggcggaggggt 53
              ||||||||||||||||||||
Sbjct: 117551 ggccacggcggcggaggggt 117532

>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome
          Length = 3997420

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 297     agatgctgctgagcctgttc 316
               ||||||||||||||||||||
Sbjct: 1737145 agatgctgctgagcctgttc 1737126

>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence
          Length = 3694126

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 107     ttcgtcggcctcgtcgtgcc 126
               ||||||||||||||||||||
Sbjct: 2901101 ttcgtcggcctcgtcgtgcc 2901082

>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome
          Length = 6438405

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 61      tcagaagacgtgggcagccatccgccgg 88
               ||||||||| |||||| |||||||||||
Sbjct: 3462345 tcagaagacttgggcaaccatccgccgg 3462372

>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 85      ccgggcgaaccgcgccgggc 104
               ||||||||||||||||||||
Sbjct: 2930937 ccgggcgaaccgcgccgggc 2930956

>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 85    ccgggcgaaccgcgccgggc 104
             ||||||||||||||||||||
Sbjct: 58310 ccgggcgaaccgcgccgggc 58329

>emb|AL354826.6| Human DNA sequence from clone RP11-286M16 on chromosome 1 Contains a
              novel gene, complete sequence
          Length = 203279

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 297    agatgctgctgagcctgttc 316
              ||||||||||||||||||||
Sbjct: 132755 agatgctgctgagcctgttc 132736

>emb|BX572600.1| Rhodopseudomonas palustris CGA009 complete genome; segment 8/16
          Length = 349640

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 104    ccgttcgtcggcctcgtcgtgcccaaca 131
              ||||||||||| |||||||| |||||||
Sbjct: 260525 ccgttcgtcgggctcgtcgtccccaaca 260498

>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 85      ccgggcgaaccgcgccgggc 104
               ||||||||||||||||||||
Sbjct: 3903912 ccgggcgaaccgcgccgggc 3903931

>emb|AJ621385.1| Gallus gallus RAD50 gene (partial), IL5 gene, IRF1 gene, OCTN2 gene and
             OCTN1 gene (partial)
          Length = 113629

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 234   aaggccaaagcgtcgtcatggtca 257
             ||||||||| ||||||||||||||
Sbjct: 98145 aaggccaaaacgtcgtcatggtca 98168

>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 91      gaaccgcgccgggccgttcg 110
               ||||||||||||||||||||
Sbjct: 3054010 gaaccgcgccgggccgttcg 3053991

>gb|AC105264.3| Drosophila melanogaster 3L BAC RP98-17K18 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 177583

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 156    agtcgcccagcttcgtggcc 175
              ||||||||||||||||||||
Sbjct: 139683 agtcgcccagcttcgtggcc 139702

>gb|AC010118.8| Drosophila melanogaster 3L BAC RP98-10D15 (Roswell Park Cancer
             Institute Drosophila BAC Library) complete sequence
          Length = 171868

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 156   agtcgcccagcttcgtggcc 175
             ||||||||||||||||||||
Sbjct: 26990 agtcgcccagcttcgtggcc 27009

>gb|CP000138.1| Rhizobium etli CFN 42 plasmid p42f, complete sequence
          Length = 642517

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 107    ttcgtcggcctcgtcgtgcc 126
              ||||||||||||||||||||
Sbjct: 294762 ttcgtcggcctcgtcgtgcc 294781

>ref|NM_206235.1| Drosophila melanogaster CG13921-RB, transcript variant B (CG13921),
            mRNA
          Length = 4265

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 156  agtcgcccagcttcgtggcc 175
            ||||||||||||||||||||
Sbjct: 3389 agtcgcccagcttcgtggcc 3408

>ref|NM_139399.1| Drosophila melanogaster CG13921-RA, transcript variant A (CG13921),
            mRNA
          Length = 4857

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 156  agtcgcccagcttcgtggcc 175
            ||||||||||||||||||||
Sbjct: 3971 agtcgcccagcttcgtggcc 3990

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 34      ggccacggcggcggaggggt 53
               ||||||||||||||||||||
Sbjct: 1758208 ggccacggcggcggaggggt 1758227

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                            
Query: 160      gcccagcttcgtggccagcaagagcatc 187
                ||||||||||||||| | ||||||||||
Sbjct: 18607119 gcccagcttcgtggcaaacaagagcatc 18607146

>gb|AF448145.2| Myxococcus xanthus che3 chemosensory regulator gene cluster, complete
             sequence
          Length = 17906

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 158   tcgcccagcttcgtggccag 177
             ||||||||||||||||||||
Sbjct: 17872 tcgcccagcttcgtggccag 17891

>dbj|BA000002.2| Aeropyrum pernix K1 DNA, complete genome
          Length = 1669695

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 164    agcttcgtggccagcaagag 183
              ||||||||||||||||||||
Sbjct: 478483 agcttcgtggccagcaagag 478502

>dbj|AP005468.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0020P04
          Length = 153894

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 160   gcccagcttcgtggccagcaagagcatc 187
             ||||||||||||||| | ||||||||||
Sbjct: 59222 gcccagcttcgtggcaaacaagagcatc 59249

>gb|AE003472.1| Drosophila melanogaster chromosome 3L, section 6 of 83 of the complete
              sequence
          Length = 303191

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 156    agtcgcccagcttcgtggcc 175
              ||||||||||||||||||||
Sbjct: 216811 agtcgcccagcttcgtggcc 216830

>gb|AC005557.1|AC005557 Drosophila melanogaster, chromosome 3L, region 62A10-62B5, P1 clones
              DS02777, DS03222, DS02345, and DS04808, complete sequence
          Length = 257867

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 156    agtcgcccagcttcgtggcc 175
              ||||||||||||||||||||
Sbjct: 139977 agtcgcccagcttcgtggcc 139996

>gb|BT001721.1| Drosophila melanogaster RE69223 full insert cDNA
          Length = 4287

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 156  agtcgcccagcttcgtggcc 175
            ||||||||||||||||||||
Sbjct: 3388 agtcgcccagcttcgtggcc 3407

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 34      ggccacggcggcggaggggt 53
               ||||||||||||||||||||
Sbjct: 1755929 ggccacggcggcggaggggt 1755948


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,787,992
Number of Sequences: 3902068
Number of extensions: 1787992
Number of successful extensions: 36967
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 36328
Number of HSP's gapped (non-prelim): 636
length of query: 316
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 294
effective length of database: 17,147,199,772
effective search space: 5041276732968
effective search space used: 5041276732968
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)