>VE2_HPV53 (P36797) Regulatory protein E2|
          Length = 384

 Score = 35.0 bits (79), Expect = 0.14
 Identities = 23/64 (35%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
 Frame = -3

Query: 220 TPPTQTNKGEVE-SRKLRPMKR-RTEEPDTXXXXXXXXXXXAGCHQEQLARSWSQEINQG 47
           TP T T  G  E S  LRP KR RT EPD+              + E +AR+     N  
Sbjct: 221 TPTTSTPVGTYEASSSLRPGKRPRTTEPDSTDSTTQSTTTARESYAECVARNTDNTNNNT 280

Query: 46  RRHM 35
           R+H+
Sbjct: 281 RKHL 284

>PUMA_PARUN (O61308) 227 kDa spindle- and centromere-associated protein (PUMA1)|
          Length = 1955

 Score = 30.4 bits (67), Expect = 3.3
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = -3

Query: 217  PPTQTNKGEVESRKLRPMKRRTEEPDT 137
            PPT+ N+G+V  RK RP  R+ +   T
Sbjct: 1926 PPTEVNQGDVTGRKSRPATRKQQMKST 1952


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 45,344,276
Number of Sequences: 219361
Number of extensions: 660529
Number of successful extensions: 1705
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1681
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1701
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4315578075
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)