ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart49a01 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC134045.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0022E16 map C481S, complete sequence Length = 179668 Score = 188 bits (95), Expect = 1e-44 Identities = 181/211 (85%), Gaps = 9/211 (4%) Strand = Plus / Plus Query: 316 ggcgtcgggctcacggtggtgtccgcgctcctcctcctcgcactcgccgccgagctctac 375 ||||||||| | |||||||||||||||| || || ||||| |||||||||||||||||| Sbjct: 121188 ggcgtcgggttggcggtggtgtccgcgctgctactgctcgcgctcgccgccgagctctac 121247 Query: 376 tacctcctcgtgcacaagcgccgccaccgacgacgcgccgccgctatctccgacgccgca 435 |||||| |||| |||||||||||| || ||||||| |||||||||||||| Sbjct: 121248 tacctcttcgtctacaagcgccgcc---------gctccgccgccatctccgacgccgcc 121298 Query: 436 tcatcaccctcctcctcctcccgcgagctgctccagctcttctgcttcaagaagccgccc 495 || || |||||||| || || ||||||||||||||||| ||||||||||||||||||||| Sbjct: 121299 tcctcgccctcctcttcttctcgcgagctgctccagcttttctgcttcaagaagccgccc 121358 Query: 496 gcgctcgcgtccacctacgcgcaggagccgc 526 |||||||| || ||||||||||||||||||| Sbjct: 121359 gcgctcgcctcgacctacgcgcaggagccgc 121389
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 188 bits (95), Expect = 1e-44 Identities = 181/211 (85%), Gaps = 9/211 (4%) Strand = Plus / Plus Query: 316 ggcgtcgggctcacggtggtgtccgcgctcctcctcctcgcactcgccgccgagctctac 375 ||||||||| | |||||||||||||||| || || ||||| |||||||||||||||||| Sbjct: 28162633 ggcgtcgggttggcggtggtgtccgcgctgctactgctcgcgctcgccgccgagctctac 28162692 Query: 376 tacctcctcgtgcacaagcgccgccaccgacgacgcgccgccgctatctccgacgccgca 435 |||||| |||| |||||||||||| || ||||||| |||||||||||||| Sbjct: 28162693 tacctcttcgtctacaagcgccgcc---------gctccgccgccatctccgacgccgcc 28162743 Query: 436 tcatcaccctcctcctcctcccgcgagctgctccagctcttctgcttcaagaagccgccc 495 || || |||||||| || || ||||||||||||||||| ||||||||||||||||||||| Sbjct: 28162744 tcctcgccctcctcttcttctcgcgagctgctccagcttttctgcttcaagaagccgccc 28162803 Query: 496 gcgctcgcgtccacctacgcgcaggagccgc 526 |||||||| || ||||||||||||||||||| Sbjct: 28162804 gcgctcgcctcgacctacgcgcaggagccgc 28162834
>dbj|AK060355.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-008-G09, full insert sequence Length = 1420 Score = 188 bits (95), Expect = 1e-44 Identities = 181/211 (85%), Gaps = 9/211 (4%) Strand = Plus / Plus Query: 316 ggcgtcgggctcacggtggtgtccgcgctcctcctcctcgcactcgccgccgagctctac 375 ||||||||| | |||||||||||||||| || || ||||| |||||||||||||||||| Sbjct: 481 ggcgtcgggttggcggtggtgtccgcgctgctactgctcgcgctcgccgccgagctctac 540 Query: 376 tacctcctcgtgcacaagcgccgccaccgacgacgcgccgccgctatctccgacgccgca 435 |||||| |||| |||||||||||| || ||||||| |||||||||||||| Sbjct: 541 tacctcttcgtctacaagcgccgcc---------gctccgccgccatctccgacgccgcc 591 Query: 436 tcatcaccctcctcctcctcccgcgagctgctccagctcttctgcttcaagaagccgccc 495 || || |||||||| || || ||||||||||||||||| ||||||||||||||||||||| Sbjct: 592 tcctcgccctcctcttcttctcgcgagctgctccagcttttctgcttcaagaagccgccc 651 Query: 496 gcgctcgcgtccacctacgcgcaggagccgc 526 |||||||| || ||||||||||||||||||| Sbjct: 652 gcgctcgcctcgacctacgcgcaggagccgc 682
>dbj|AK060197.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-001-F05, full insert sequence Length = 1647 Score = 188 bits (95), Expect = 1e-44 Identities = 181/211 (85%), Gaps = 9/211 (4%) Strand = Plus / Plus Query: 316 ggcgtcgggctcacggtggtgtccgcgctcctcctcctcgcactcgccgccgagctctac 375 ||||||||| | |||||||||||||||| || || ||||| |||||||||||||||||| Sbjct: 553 ggcgtcgggttggcggtggtgtccgcgctgctactgctcgcgctcgccgccgagctctac 612 Query: 376 tacctcctcgtgcacaagcgccgccaccgacgacgcgccgccgctatctccgacgccgca 435 |||||| |||| |||||||||||| || ||||||| |||||||||||||| Sbjct: 613 tacctcttcgtctacaagcgccgcc---------gctccgccgccatctccgacgccgcc 663 Query: 436 tcatcaccctcctcctcctcccgcgagctgctccagctcttctgcttcaagaagccgccc 495 || || |||||||| || || ||||||||||||||||| ||||||||||||||||||||| Sbjct: 664 tcctcgccctcctcttcttctcgcgagctgctccagcttttctgcttcaagaagccgccc 723 Query: 496 gcgctcgcgtccacctacgcgcaggagccgc 526 |||||||| || ||||||||||||||||||| Sbjct: 724 gcgctcgcctcgacctacgcgcaggagccgc 754
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 188 bits (95), Expect = 1e-44 Identities = 181/211 (85%), Gaps = 9/211 (4%) Strand = Plus / Plus Query: 316 ggcgtcgggctcacggtggtgtccgcgctcctcctcctcgcactcgccgccgagctctac 375 ||||||||| | |||||||||||||||| || || ||||| |||||||||||||||||| Sbjct: 28147511 ggcgtcgggttggcggtggtgtccgcgctgctactgctcgcgctcgccgccgagctctac 28147570 Query: 376 tacctcctcgtgcacaagcgccgccaccgacgacgcgccgccgctatctccgacgccgca 435 |||||| |||| |||||||||||| || ||||||| |||||||||||||| Sbjct: 28147571 tacctcttcgtctacaagcgccgcc---------gctccgccgccatctccgacgccgcc 28147621 Query: 436 tcatcaccctcctcctcctcccgcgagctgctccagctcttctgcttcaagaagccgccc 495 || || |||||||| || || ||||||||||||||||| ||||||||||||||||||||| Sbjct: 28147622 tcctcgccctcctcttcttctcgcgagctgctccagcttttctgcttcaagaagccgccc 28147681 Query: 496 gcgctcgcgtccacctacgcgcaggagccgc 526 |||||||| || ||||||||||||||||||| Sbjct: 28147682 gcgctcgcctcgacctacgcgcaggagccgc 28147712
>gb|BT018472.1| Zea mays clone EL01N0422G04.d mRNA sequence Length = 1502 Score = 161 bits (81), Expect = 3e-36 Identities = 173/203 (85%), Gaps = 3/203 (1%) Strand = Plus / Plus Query: 316 ggcgtcgggctcacggtggtgtccgcgctcctcctcctcgcactcgccgccgagctctac 375 ||||||||||| | ||||||||| |||| ||||| || || ||| |||| ||||||||| Sbjct: 392 ggcgtcgggctggccgtggtgtcctcgctactcctgctggcgctcaccgcggagctctac 451 Query: 376 tacctcctcgtgcacaagcgccgccaccgacgacgcgccgccgctatctccgacgccgca 435 ||| || |||||||||||||||| || || || |||||||| || |||||||||| || Sbjct: 452 tacatcttcgtgcacaagcgccggcagcggcggcgcgccgcggccgtctccgacgcggcc 511 Query: 436 tcatcaccctcctcctcctcccgcgagctgctccagctcttctgcttcaagaa---gccg 492 || || || |||||||||||||||||||||||||||||||| ||||||||||| |||| Sbjct: 512 tcgtctccgtcctcctcctcccgcgagctgctccagctcttttgcttcaagaagccgccg 571 Query: 493 cccgcgctcgcgtccacctacgc 515 || | |||||||||||||||||| Sbjct: 572 ccggagctcgcgtccacctacgc 594
>dbj|AK073953.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033076G17, full insert sequence Length = 1380 Score = 147 bits (74), Expect = 4e-32 Identities = 104/114 (91%) Strand = Plus / Plus Query: 413 ccgccgctatctccgacgccgcatcatcaccctcctcctcctcccgcgagctgctccagc 472 ||||||| |||||||||||||| || || |||||||| || || |||||||||||||||| Sbjct: 529 ccgccgccatctccgacgccgcctcctcgccctcctcttcttctcgcgagctgctccagc 588 Query: 473 tcttctgcttcaagaagccgcccgcgctcgcgtccacctacgcgcaggagccgc 526 | ||||||||||||||||||||||||||||| || ||||||||||||||||||| Sbjct: 589 ttttctgcttcaagaagccgcccgcgctcgcctcgacctacgcgcaggagccgc 642
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 48.1 bits (24), Expect = 0.030 Identities = 30/32 (93%) Strand = Plus / Plus Query: 486 gaagccgcccgcgctcgcgtccacctacgcgc 517 ||||||||| ||||||||||||| |||||||| Sbjct: 1222656 gaagccgccggcgctcgcgtccatctacgcgc 1222687 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Minus Query: 349 ctcctcgcactcgccgccgagc 370 |||||||||||||||||||||| Sbjct: 2748636 ctcctcgcactcgccgccgagc 2748615
>emb|AL772258.9| Mouse DNA sequence from clone RP23-337P24 on chromosome 2, complete sequence Length = 200480 Score = 48.1 bits (24), Expect = 0.030 Identities = 24/24 (100%) Strand = Plus / Minus Query: 433 gcatcatcaccctcctcctcctcc 456 |||||||||||||||||||||||| Sbjct: 11896 gcatcatcaccctcctcctcctcc 11873
>gb|CP000081.1| Leishmania major chromosome 35, complete sequence Length = 2090491 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 342 gctcctcctcctcgcactcgccg 364 ||||||||||||||||||||||| Sbjct: 1794905 gctcctcctcctcgcactcgccg 1794883
>ref|XM_838460.1| Leishmania major strain Friedlin hypothetical protein (LMJ_1378) partial mRNA Length = 600 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 342 gctcctcctcctcgcactcgccg 364 ||||||||||||||||||||||| Sbjct: 568 gctcctcctcctcgcactcgccg 546
>gb|AC124381.4| Mus musculus BAC clone RP24-406E24 from chromosome 15, complete sequence Length = 176561 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 434 catcatcaccctcctcctcctcc 456 ||||||||||||||||||||||| Sbjct: 74682 catcatcaccctcctcctcctcc 74660
>gb|AC124763.4| Mus musculus BAC clone RP23-158P17 from 12, complete sequence Length = 208489 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 434 catcatcaccctcctcctcctcc 456 ||||||||||||||||||||||| Sbjct: 129487 catcatcaccctcctcctcctcc 129465
>gb|CP000070.1| Trypanosoma brucei chromosome 7, complete sequence Length = 2205233 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Minus Query: 435 atcatcaccctcctcctcctcc 456 |||||||||||||||||||||| Sbjct: 1411009 atcatcaccctcctcctcctcc 1410988 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 436 tcatcaccctcctcctcctc 455 |||||||||||||||||||| Sbjct: 134466 tcatcaccctcctcctcctc 134485
>gb|AC105378.10| Trypanosoma brucei chromosome 7 clone RPCI93-27E10, complete sequence Length = 138995 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Minus Query: 435 atcatcaccctcctcctcctcc 456 |||||||||||||||||||||| Sbjct: 113194 atcatcaccctcctcctcctcc 113173
>ref|XR_005003.1| PREDICTED: Mus musculus hypothetical protein LOC677075 (LOC677075), mRNA Length = 548 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Minus Query: 434 catcatcaccctcctcctcctc 455 |||||||||||||||||||||| Sbjct: 333 catcatcaccctcctcctcctc 312
>ref|XM_820588.1| Trypanosoma brucei TREU927 clone RPCI93-27E10 hypothetical protein (Tb927.7.5310) partial mRNA Length = 1989 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Minus Query: 435 atcatcaccctcctcctcctcc 456 |||||||||||||||||||||| Sbjct: 1200 atcatcaccctcctcctcctcc 1179
>ref|XM_749923.1| Aspergillus fumigatus Af293 oxysterol binding protein Osh3 (Afu3g05880) partial mRNA Length = 2976 Score = 44.1 bits (22), Expect = 0.47 Identities = 25/26 (96%) Strand = Plus / Plus Query: 431 ccgcatcatcaccctcctcctcctcc 456 ||||||||||| |||||||||||||| Sbjct: 32 ccgcatcatcatcctcctcctcctcc 57
>gb|AF490150.1| Cygnus olor zinc finger protein (ZENK) gene, exon 2 and partial cds Length = 1194 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 434 catcatcaccctcctcctcctc 455 |||||||||||||||||||||| Sbjct: 146 catcatcaccctcctcctcctc 167
>emb|BX640540.3| Chicken DNA sequence from clone WAG-124D2, complete sequence Length = 161956 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 32 gtccatgtgtctcctgccctga 53 |||||||||||||||||||||| Sbjct: 71973 gtccatgtgtctcctgccctga 71994
>emb|CR703162.2|CNS0G5IE Tetraodon nigroviridis full-length cDNA Length = 1172 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 435 atcatcaccctcctcctcctcc 456 |||||||||||||||||||||| Sbjct: 1 atcatcaccctcctcctcctcc 22
>ref|XM_662055.1| Cryptosporidium hominis TU502 regulator of chromosome condensation (Chro.40154) partial mRNA Length = 2337 Score = 44.1 bits (22), Expect = 0.47 Identities = 28/30 (93%) Strand = Plus / Minus Query: 103 cttcttcctgttccactgcctcttctttct 132 ||||||||| ||||||| |||||||||||| Sbjct: 1564 cttcttcctcttccacttcctcttctttct 1535
>gb|AC009024.6|AC009024 Homo sapiens chromosome 16 clone RP11-112G1, complete sequence Length = 158256 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Minus Query: 103 cttcttcctgttccactgcctc 124 |||||||||||||||||||||| Sbjct: 85660 cttcttcctgttccactgcctc 85639
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 394 cgccgccaccgacgacgcgccg 415 |||||||||||||||||||||| Sbjct: 1153488 cgccgccaccgacgacgcgccg 1153509
>emb|AL607109.21| Mouse DNA sequence from clone RP23-352D7 on chromosome 4, complete sequence Length = 187252 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 434 catcatcaccctcctcctcctc 455 |||||||||||||||||||||| Sbjct: 37883 catcatcaccctcctcctcctc 37904
>ref|XM_493721.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1563 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 340 gcgctcctcctcctcgcactcgccgccga 368 ||||||||||||||||| |||||||||| Sbjct: 1542 gcgctcctcctcctcgccgtcgccgccga 1514
>gb|AC161248.2| Mus musculus BAC clone RP24-530L5 from chromosome 12, complete sequence Length = 155861 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 43 tcctgccctgattgatttctt 63 ||||||||||||||||||||| Sbjct: 6267 tcctgccctgattgatttctt 6287
>ref|XM_482082.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3262 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 343 ctcctcctcctcgcactcgccgccg 367 |||||||||||||| |||||||||| Sbjct: 58 ctcctcctcctcgccctcgccgccg 82
>ref|NM_183955.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1794 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 439 tcaccctcctcctcctcccgc 459 ||||||||||||||||||||| Sbjct: 967 tcaccctcctcctcctcccgc 947
>ref|XM_476970.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1866 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 394 cgccgccaccgacgacgcgcc 414 ||||||||||||||||||||| Sbjct: 1407 cgccgccaccgacgacgcgcc 1427
>ref|NM_187714.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 267 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 491 cgcccgcgctcgcgtccacct 511 ||||||||||||||||||||| Sbjct: 199 cgcccgcgctcgcgtccacct 179
>ref|XM_958088.1| Neurospora crassa OR74A hypothetical protein (NCU08421.1) partial mRNA Length = 1290 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 432 cgcatcatcaccctcctcctcctcc 456 |||||||||| |||||||||||||| Sbjct: 1239 cgcatcatcatcctcctcctcctcc 1215
>ref|XM_329466.1| Neurospora crassa OR74A hypothetical protein (NCU08421.1) partial mRNA Length = 1290 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 432 cgcatcatcaccctcctcctcctcc 456 |||||||||| |||||||||||||| Sbjct: 1239 cgcatcatcatcctcctcctcctcc 1215
>gb|AC087289.9| Homo sapiens chromosome 17, clone RP11-552F3, complete sequence Length = 203765 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 21 ccactccgtatgtccatgtgt 41 ||||||||||||||||||||| Sbjct: 165300 ccactccgtatgtccatgtgt 165320
>gb|AC069540.6| Homo sapiens chromosome 10 clone RP11-344L13, complete sequence Length = 201182 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 21 ccactccgtatgtccatgtgt 41 ||||||||||||||||||||| Sbjct: 77861 ccactccgtatgtccatgtgt 77881
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 343 ctcctcctcctcgcactcgccgccg 367 |||||||||||||| |||||||||| Sbjct: 17646589 ctcctcctcctcgccctcgccgccg 17646565 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 392 agcgccgccaccgacgacgc 411 |||||||||||||||||||| Sbjct: 24122069 agcgccgccaccgacgacgc 24122088 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 392 agcgccgccaccgacgacgc 411 |||||||||||||||||||| Sbjct: 8972121 agcgccgccaccgacgacgc 8972140
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 394 cgccgccaccgacgacgcgcc 414 ||||||||||||||||||||| Sbjct: 5138604 cgccgccaccgacgacgcgcc 5138624 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 409 cgcgccgccgctatctccgacgcc 432 |||||||||||| ||||||||||| Sbjct: 23219019 cgcgccgccgctgtctccgacgcc 23219042
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 340 gcgctcctcctcctcgcactcgccgccga 368 ||||||||||||||||| |||||||||| Sbjct: 2154090 gcgctcctcctcctcgccgtcgccgccga 2154118
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 439 tcaccctcctcctcctcccgc 459 ||||||||||||||||||||| Sbjct: 13523814 tcaccctcctcctcctcccgc 13523794 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 491 cgcccgcgctcgcgtccacct 511 ||||||||||||||||||||| Sbjct: 10134951 cgcccgcgctcgcgtccacct 10134931
>dbj|AP003329.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1045F02 Length = 215378 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 439 tcaccctcctcctcctcccgc 459 ||||||||||||||||||||| Sbjct: 77774 tcaccctcctcctcctcccgc 77754
>dbj|AP003631.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0581F09 Length = 154248 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 491 cgcccgcgctcgcgtccacct 511 ||||||||||||||||||||| Sbjct: 82420 cgcccgcgctcgcgtccacct 82400
>dbj|AP003020.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0498A12 Length = 159749 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 491 cgcccgcgctcgcgtccacct 511 ||||||||||||||||||||| Sbjct: 265 cgcccgcgctcgcgtccacct 245
>gb|AC009803.17| Homo sapiens 12 BAC RP11-1028N23 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 186044 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 435 atcatcaccctcctcctcctc 455 ||||||||||||||||||||| Sbjct: 174698 atcatcaccctcctcctcctc 174718
>dbj|AP003848.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1715_A07 Length = 130907 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 394 cgccgccaccgacgacgcgcc 414 ||||||||||||||||||||| Sbjct: 5318 cgccgccaccgacgacgcgcc 5338
>dbj|AP000399.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, clone:P0535G04 Length = 154180 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 340 gcgctcctcctcctcgcactcgccgccga 368 ||||||||||||||||| |||||||||| Sbjct: 13547 gcgctcctcctcctcgccgtcgccgccga 13575
>dbj|AP003743.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1118_E12 Length = 119691 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 394 cgccgccaccgacgacgcgcc 414 ||||||||||||||||||||| Sbjct: 94771 cgccgccaccgacgacgcgcc 94791
>dbj|AP004397.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0436B06 Length = 148947 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 343 ctcctcctcctcgcactcgccgccg 367 |||||||||||||| |||||||||| Sbjct: 123239 ctcctcctcctcgccctcgccgccg 123215
>dbj|AP003962.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1705_C03 Length = 118339 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 343 ctcctcctcctcgcactcgccgccg 367 |||||||||||||| |||||||||| Sbjct: 31978 ctcctcctcctcgccctcgccgccg 31954
>dbj|AK119993.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-184-G09, full insert sequence Length = 573 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 491 cgcccgcgctcgcgtccacct 511 ||||||||||||||||||||| Sbjct: 394 cgcccgcgctcgcgtccacct 374
>dbj|AK072348.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023050N03, full insert sequence Length = 3262 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 343 ctcctcctcctcgcactcgccgccg 367 |||||||||||||| |||||||||| Sbjct: 58 ctcctcctcctcgccctcgccgccg 82
>dbj|AK063921.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-123-B10, full insert sequence Length = 2024 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 439 tcaccctcctcctcctcccgc 459 ||||||||||||||||||||| Sbjct: 1038 tcaccctcctcctcctcccgc 1018
>dbj|AK063365.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-114-D08, full insert sequence Length = 1866 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 394 cgccgccaccgacgacgcgcc 414 ||||||||||||||||||||| Sbjct: 1407 cgccgccaccgacgacgcgcc 1427
>gb|AC158383.3| Mus musculus BAC clone RP23-135O16 from chromosome 12, complete sequence Length = 196552 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 43 tcctgccctgattgatttctt 63 ||||||||||||||||||||| Sbjct: 179965 tcctgccctgattgatttctt 179985
>emb|AL954730.15| Mouse DNA sequence from clone RP23-461C4 on chromosome 11, complete sequence Length = 193721 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 113 ttccactgcctcttctttctg 133 ||||||||||||||||||||| Sbjct: 162377 ttccactgcctcttctttctg 162397
>dbj|AP003018.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0004B13 Length = 142268 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 491 cgcccgcgctcgcgtccacct 511 ||||||||||||||||||||| Sbjct: 59550 cgcccgcgctcgcgtccacct 59530
>gb|AY357119.1| Pisum sativum chloroplast outer envelope protein translocator Toc12 mRNA, complete cds; nuclear gene for chloroplast product Length = 610 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 253 tggaagaaaggaaaagaaac 272 |||||||||||||||||||| Sbjct: 182 tggaagaaaggaaaagaaac 201
>gb|AC161120.5| Mus musculus BAC clone RP23-84A2 from chromosome 10, complete sequence Length = 214638 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 33 tccatgtgtctcctgccctg 52 |||||||||||||||||||| Sbjct: 200315 tccatgtgtctcctgccctg 200296
>gb|AC167971.3| Mus musculus BAC clone RP24-439I22 from chromosome 7, complete sequence Length = 198057 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 122 ctcttctttctgttaggtgt 141 |||||||||||||||||||| Sbjct: 194030 ctcttctttctgttaggtgt 194049
>ref|XM_483065.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2702 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 392 agcgccgccaccgacgacgc 411 |||||||||||||||||||| Sbjct: 180 agcgccgccaccgacgacgc 161
>ref|XM_480968.1| Oryza sativa (japonica cultivar-group), mRNA Length = 309 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 392 agcgccgccaccgacgacgc 411 |||||||||||||||||||| Sbjct: 157 agcgccgccaccgacgacgc 176
>ref|XM_506895.1| PREDICTED Oryza sativa (japonica cultivar-group), P0516F12.29-2 mRNA Length = 2302 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 345 cctcctcctcgcactcgccg 364 |||||||||||||||||||| Sbjct: 984 cctcctcctcgcactcgccg 1003
>ref|XM_467177.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2302 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 345 cctcctcctcgcactcgccg 364 |||||||||||||||||||| Sbjct: 984 cctcctcctcgcactcgccg 1003
>ref|XM_467176.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2722 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 345 cctcctcctcgcactcgccg 364 |||||||||||||||||||| Sbjct: 1429 cctcctcctcgcactcgccg 1448
>ref|NM_196827.1| Oryza sativa (japonica cultivar-group) putative pectate lyase (OSJNBa0018F16.19), mRNA Length = 1404 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 440 caccctcctcctcctcccgc 459 |||||||||||||||||||| Sbjct: 51 caccctcctcctcctcccgc 70
>ref|XM_478821.1| Oryza sativa (japonica cultivar-group), mRNA Length = 417 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 409 cgcgccgccgctatctccgacgcc 432 |||||||||||| ||||||||||| Sbjct: 366 cgcgccgccgctgtctccgacgcc 389
>gb|AC159458.1| Trypanosoma brucei chromosome 7 clone RPCI93-8P12, complete sequence Length = 150032 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 436 tcatcaccctcctcctcctc 455 |||||||||||||||||||| Sbjct: 134465 tcatcaccctcctcctcctc 134484
>gb|AC159437.1| Trypanosoma brucei chromosome 7 clone RPCI93-29K4, complete sequence Length = 159858 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 436 tcatcaccctcctcctcctc 455 |||||||||||||||||||| Sbjct: 139479 tcatcaccctcctcctcctc 139460
>gb|BC097135.1| Danio rerio translocation protein 1, mRNA (cDNA clone MGC:114073 IMAGE:7438160), complete cds Length = 1335 Score = 40.1 bits (20), Expect = 7.4 Identities = 33/36 (91%), Gaps = 1/36 (2%) Strand = Plus / Minus Query: 443 cctcctcctcctcccgcgagctgctccagctcttct 478 |||||||||||||| | | ||||||||||||||||| Sbjct: 1203 cctcctcctcctcc-gtgtgctgctccagctcttct 1169
>ref|XM_866246.1| PREDICTED: Bos taurus similar to 116 kDa U5 small nuclear ribonucleoprotein component (U5 snRNP-specific protein, 116 kDa) (U5-116 kDa) (Elongation factor Tu GTP binding domain protein 2), transcript variant 2 (LOC509425), mRNA Length = 3368 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 ccagcttcttcctgttccac 118 |||||||||||||||||||| Sbjct: 2228 ccagcttcttcctgttccac 2209
>ref|XM_877979.1| PREDICTED: Bos taurus similar to 116 kDa U5 small nuclear ribonucleoprotein component (U5 snRNP-specific protein, 116 kDa) (U5-116 kDa) (Elongation factor Tu GTP binding domain protein 2), transcript variant 7 (LOC509425), mRNA Length = 3377 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 ccagcttcttcctgttccac 118 |||||||||||||||||||| Sbjct: 2237 ccagcttcttcctgttccac 2218
>ref|XM_586376.2| PREDICTED: Bos taurus similar to 116 kDa U5 small nuclear ribonucleoprotein component (U5 snRNP-specific protein, 116 kDa) (U5-116 kDa) (Elongation factor Tu GTP binding domain protein 2), transcript variant 1 (LOC509425), mRNA Length = 3380 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 ccagcttcttcctgttccac 118 |||||||||||||||||||| Sbjct: 2240 ccagcttcttcctgttccac 2221
>ref|XM_877897.1| PREDICTED: Bos taurus similar to 116 kDa U5 small nuclear ribonucleoprotein component (U5 snRNP-specific protein, 116 kDa) (U5-116 kDa) (Elongation factor Tu GTP binding domain protein 2), transcript variant 6 (LOC509425), mRNA Length = 3365 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 ccagcttcttcctgttccac 118 |||||||||||||||||||| Sbjct: 2225 ccagcttcttcctgttccac 2206
>ref|XM_877816.1| PREDICTED: Bos taurus similar to 116 kDa U5 small nuclear ribonucleoprotein component (U5 snRNP-specific protein, 116 kDa) (U5-116 kDa) (Elongation factor Tu GTP binding domain protein 2), transcript variant 4 (LOC509425), mRNA Length = 1968 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 ccagcttcttcctgttccac 118 |||||||||||||||||||| Sbjct: 828 ccagcttcttcctgttccac 809
>gb|AC084296.12| Oryza sativa chromosome 3 BAC OSJNBb0024J04 genomic sequence, complete sequence Length = 145507 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 439 tcaccctcctcctcctcccg 458 |||||||||||||||||||| Sbjct: 88078 tcaccctcctcctcctcccg 88097
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 439 tcaccctcctcctcctcccg 458 |||||||||||||||||||| Sbjct: 32435950 tcaccctcctcctcctcccg 32435969 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 443 cctcctcctcctcccgcgagctgctcca 470 ||||||||||||| |||||||| ||||| Sbjct: 7445947 cctcctcctcctcgcgcgagctcctcca 7445974
>gb|AC159999.6| Mus musculus BAC clone RP23-6P9 from chromosome 10, complete sequence Length = 216489 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 33 tccatgtgtctcctgccctg 52 |||||||||||||||||||| Sbjct: 34915 tccatgtgtctcctgccctg 34896
>gb|AC109269.17| Mus musculus chromosome 1, clone RP23-325F17, complete sequence Length = 219191 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 258 gaaaggaaaagaaacccctg 277 |||||||||||||||||||| Sbjct: 150336 gaaaggaaaagaaacccctg 150317
>ref|XM_847344.1| PREDICTED: Canis familiaris similar to 5-3 exoribonuclease 1, transcript variant 3 (LOC477100), mRNA Length = 5231 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 254 ggaagaaaggaaaagaaacc 273 |||||||||||||||||||| Sbjct: 1874 ggaagaaaggaaaagaaacc 1893
>ref|XM_534294.2| PREDICTED: Canis familiaris similar to 5-3 exoribonuclease 1, transcript variant 2 (LOC477100), mRNA Length = 5306 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 254 ggaagaaaggaaaagaaacc 273 |||||||||||||||||||| Sbjct: 1874 ggaagaaaggaaaagaaacc 1893
>ref|XM_860585.1| PREDICTED: Canis familiaris similar to 5-3 exoribonuclease 1, transcript variant 7 (LOC477100), mRNA Length = 3165 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 254 ggaagaaaggaaaagaaacc 273 |||||||||||||||||||| Sbjct: 1874 ggaagaaaggaaaagaaacc 1893
>ref|XM_860571.1| PREDICTED: Canis familiaris similar to 5-3 exoribonuclease 1, transcript variant 6 (LOC477100), mRNA Length = 5140 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 254 ggaagaaaggaaaagaaacc 273 |||||||||||||||||||| Sbjct: 1819 ggaagaaaggaaaagaaacc 1838
>ref|XM_860555.1| PREDICTED: Canis familiaris similar to 5-3 exoribonuclease 1, transcript variant 5 (LOC477100), mRNA Length = 3697 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 254 ggaagaaaggaaaagaaacc 273 |||||||||||||||||||| Sbjct: 376 ggaagaaaggaaaagaaacc 395
>ref|XM_860538.1| PREDICTED: Canis familiaris similar to 5-3 exoribonuclease 1, transcript variant 4 (LOC477100), mRNA Length = 5874 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 254 ggaagaaaggaaaagaaacc 273 |||||||||||||||||||| Sbjct: 1874 ggaagaaaggaaaagaaacc 1893
>ref|XM_818190.1| Trypanosoma brucei TREU927 hypothetical protein (Tb10.406.0270) partial mRNA Length = 783 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 434 catcatcaccctcctcctcctccc 457 ||||||||||||| |||||||||| Sbjct: 676 catcatcaccctcatcctcctccc 653
>ref|XM_819419.1| Trypanosoma brucei TREU927 clone RPCI93-29K4 hypothetical protein (Tb927.7.650) partial mRNA Length = 2955 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 436 tcatcaccctcctcctcctc 455 |||||||||||||||||||| Sbjct: 2504 tcatcaccctcctcctcctc 2485
>emb|AJ538319.1|PFL538319 Platichthys flesus microsatellite DNA, locus StPfl021 Length = 335 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 434 catcatcaccctcctcctcctccc 457 |||||||| ||||||||||||||| Sbjct: 168 catcatcatcctcctcctcctccc 191
>gb|AC136136.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0071C04, from chromosome 3, complete sequence Length = 126078 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 443 cctcctcctcctcccgcgagctgctcca 470 ||||||||||||| |||||||| ||||| Sbjct: 84502 cctcctcctcctcgcgcgagctcctcca 84529
>gb|AY298760.1| Crotalus tigris clone Crti10 microsatellite sequence Length = 434 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 103 cttcttcctgttccactgcctcttcttt 130 |||||||||||||| || |||||||||| Sbjct: 249 cttcttcctgttcctcttcctcttcttt 222
>gb|AC121823.3| Mus musculus BAC clone RP23-466I14 from chromosome 7, complete sequence Length = 192248 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 255 gaagaaaggaaaagaaaccc 274 |||||||||||||||||||| Sbjct: 107200 gaagaaaggaaaagaaaccc 107181
>gb|AC102783.10| Mus musculus chromosome 14, clone RP23-390K3, complete sequence Length = 199993 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 469 cagctcttctgcttcaagaa 488 |||||||||||||||||||| Sbjct: 51058 cagctcttctgcttcaagaa 51039
>gb|BC002360.2| Homo sapiens elongation factor Tu GTP binding domain containing 2, mRNA (cDNA clone MGC:8581 IMAGE:2960986), complete cds Length = 3332 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 ccagcttcttcctgttccac 118 |||||||||||||||||||| Sbjct: 2174 ccagcttcttcctgttccac 2155
>emb|Z97352.1|HS341I10 Human DNA sequence from clone RP3-341I10 on chromosome 6q22.2-22.33 Contains a ribosomal protein L5 (RPL5) pseudogene, complete sequence Length = 94319 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 100 cagcttcttcctgttccact 119 |||||||||||||||||||| Sbjct: 19665 cagcttcttcctgttccact 19646
>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence Length = 2726152 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 392 agcgccgccaccgacgacgc 411 |||||||||||||||||||| Sbjct: 1339749 agcgccgccaccgacgacgc 1339768
>emb|AL139806.7| Human DNA sequence from clone RP3-455E7 on chromosome 6 Contains a pseudogene similar to part of hormonally upregulated Neu-associated kinase (HUNK), complete sequence Length = 94629 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 252 gtggaagaaaggaaaagaaa 271 |||||||||||||||||||| Sbjct: 3098 gtggaagaaaggaaaagaaa 3117
>emb|AL136966.27| Human DNA sequence from clone RP11-96M12 on chromosome 13 Contains part of a novel gene, complete sequence Length = 112884 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 tccgtatgtccatgtgtctc 44 |||||||||||||||||||| Sbjct: 41911 tccgtatgtccatgtgtctc 41892
>ref|XM_789741.1| PREDICTED: Strongylocentrotus purpuratus similar to regulator of telomere elongation helicase 1 isoform 2 (LOC590124), partial mRNA Length = 693 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 433 gcatcatcaccctcctcctcctcc 456 ||||||||| |||||||||||||| Sbjct: 367 gcatcatcatcctcctcctcctcc 390
>ref|XM_775715.1| PREDICTED: Strongylocentrotus purpuratus similar to zinc finger protein 51 (LOC575304), mRNA Length = 2964 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 433 gcatcatcaccctcctcctcctcc 456 ||||||||||| |||||||||||| Sbjct: 683 gcatcatcaccttcctcctcctcc 660
>emb|Z75095.1|SCYOR187W S.cerevisiae chromosome XV reading frame ORF YOR187w Length = 2221 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 251 cgtggaagaaaggaaaagaa 270 |||||||||||||||||||| Sbjct: 6 cgtggaagaaaggaaaagaa 25
>emb|BX572599.1| Rhodopseudomonas palustris CGA009 complete genome; segment 7/16 Length = 349142 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 396 ccgccaccgacgacgcgccg 415 |||||||||||||||||||| Sbjct: 220835 ccgccaccgacgacgcgccg 220816
>emb|AL772266.6| Zebrafish DNA sequence from clone CH211-147H1 in linkage group 12 Contains a novel gene similar to mouse Grid2ip (ionotropic glutamate receptor delta 2 (Grid2) interacting protein 1), a novel gene similar to zebrafish pim1, a novel gene similar to vertebrate RGS9 (regulator of G-protein signalling 9) and two CpG islands, complete sequence Length = 179911 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 255 gaagaaaggaaaagaaaccc 274 |||||||||||||||||||| Sbjct: 44688 gaagaaaggaaaagaaaccc 44707
>emb|AL606686.3|OSJN00084 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0070M12, complete sequence Length = 144670 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 442 ccctcctcctcctcccgcgagctg 465 ||||||||||||||| |||||||| Sbjct: 69895 ccctcctcctcctcctgcgagctg 69872
>gb|AC091606.8| Mus Musculus Strain C57BL6/J chromosome X BAC, RP23-75P20, complete sequence Length = 234105 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 437 catcaccctcctcctcctcc 456 |||||||||||||||||||| Sbjct: 80804 catcaccctcctcctcctcc 80785
>emb|BX663528.10| Zebrafish DNA sequence from clone DKEYP-47F9 in linkage group 17, complete sequence Length = 193986 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 341 cgctcctcctcctcgcactcgccg 364 ||||||||||| |||||||||||| Sbjct: 171980 cgctcctcctcttcgcactcgccg 172003
>emb|BX649372.5| Zebrafish DNA sequence from clone DKEY-52K20 in linkage group 2, complete sequence Length = 249584 Score = 40.1 bits (20), Expect = 7.4 Identities = 33/36 (91%), Gaps = 1/36 (2%) Strand = Plus / Plus Query: 443 cctcctcctcctcccgcgagctgctccagctcttct 478 |||||||||||||| | | ||||||||||||||||| Sbjct: 76007 cctcctcctcctcc-gtgtgctgctccagctcttct 76041
>emb|CR860551.1| Pongo pygmaeus mRNA; cDNA DKFZp459P087 (from clone DKFZp459P087) Length = 3384 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 ccagcttcttcctgttccac 118 |||||||||||||||||||| Sbjct: 2232 ccagcttcttcctgttccac 2213
>emb|BX571974.6| Zebrafish DNA sequence from clone DKEY-29P4 in linkage group 12, complete sequence Length = 267018 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 255 gaagaaaggaaaagaaaccc 274 |||||||||||||||||||| Sbjct: 129978 gaagaaaggaaaagaaaccc 129959
>emb|AL833765.1|HSM805078 Homo sapiens mRNA; cDNA DKFZp666J217 (from clone DKFZp666J217) Length = 5097 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 467 tccagctcttctgcttcaag 486 |||||||||||||||||||| Sbjct: 3136 tccagctcttctgcttcaag 3117
>dbj|AP008230.1| Desulfitobacterium hafniense Y51 genomic DNA, complete genome Length = 5727534 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 244 agtttgccgtggaagaaagg 263 |||||||||||||||||||| Sbjct: 3930799 agtttgccgtggaagaaagg 3930818
>ref|NM_004247.2| Homo sapiens elongation factor Tu GTP binding domain containing 2 (EFTUD2), mRNA Length = 3332 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 ccagcttcttcctgttccac 118 |||||||||||||||||||| Sbjct: 2174 ccagcttcttcctgttccac 2155
>gb|AC161034.23| Medicago truncatula clone mth2-53o24, complete sequence Length = 128806 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 434 catcatcaccctcctcctcctccc 457 |||||||| ||||||||||||||| Sbjct: 87835 catcatcatcctcctcctcctccc 87812
>dbj|AK126652.1| Homo sapiens cDNA FLJ44695 fis, clone BRACE3014714, highly similar to 116 kDa U5 small nuclear ribonucleoprotein component Length = 3675 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 ccagcttcttcctgttccac 118 |||||||||||||||||||| Sbjct: 1802 ccagcttcttcctgttccac 1783
>dbj|AK128148.1| Homo sapiens cDNA FLJ46271 fis, clone TESTI4028182, highly similar to 116 kDa U5 small nuclear ribonucleoprotein component Length = 3676 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 ccagcttcttcctgttccac 118 |||||||||||||||||||| Sbjct: 2542 ccagcttcttcctgttccac 2523
>dbj|AK126464.1| Homo sapiens cDNA FLJ44500 fis, clone UTERU3000828, highly similar to 116 kDa U5 small nuclear ribonucleoprotein component Length = 3973 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 ccagcttcttcctgttccac 118 |||||||||||||||||||| Sbjct: 2210 ccagcttcttcctgttccac 2191
>dbj|AK126193.1| Homo sapiens cDNA FLJ44205 fis, clone THYMU3001379, highly similar to 116 kDa U5 small nuclear ribonucleoprotein component Length = 3638 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 ccagcttcttcctgttccac 118 |||||||||||||||||||| Sbjct: 1871 ccagcttcttcctgttccac 1852
>gb|AC025905.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0018F16, complete sequence Length = 179157 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 440 caccctcctcctcctcccgc 459 |||||||||||||||||||| Sbjct: 125552 caccctcctcctcctcccgc 125533
>gb|AC034258.10| Oryza sativa chromosome 10 BAC OSJNBb0011A08 genomic sequence, complete sequence Length = 117157 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 440 caccctcctcctcctcccgc 459 |||||||||||||||||||| Sbjct: 111413 caccctcctcctcctcccgc 111432
>dbj|AK134651.1| Mus musculus adult male medulla oblongata cDNA, RIKEN full-length enriched library, clone:6330513I01 product:Similar to zinc finger 2.2, full insert sequence Length = 4914 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 472 ctcttctgcttcaagaagcc 491 |||||||||||||||||||| Sbjct: 4788 ctcttctgcttcaagaagcc 4769
>emb|CR456774.1| Homo sapiens full open reading frame cDNA clone RZPDo834E104D for gene U5-116KD, U5 snRNP-specific protein, 116 kD; complete cds, incl. stopcodon Length = 2919 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 ccagcttcttcctgttccac 118 |||||||||||||||||||| Sbjct: 2143 ccagcttcttcctgttccac 2124
>emb|CR353628.1| Gallus gallus finished cDNA, clone ChEST920f9 Length = 1477 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 103 cttcttcctgttccactgcctcttcttt 130 |||||||||||||| || |||||||||| Sbjct: 1347 cttcttcctgttcctcttcctcttcttt 1320
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 442 ccctcctcctcctcccgcgagctg 465 ||||||||||||||| |||||||| Sbjct: 35133392 ccctcctcctcctcctgcgagctg 35133369
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 440 caccctcctcctcctcccgc 459 |||||||||||||||||||| Sbjct: 16246663 caccctcctcctcctcccgc 16246644
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 439 tcaccctcctcctcctcccg 458 |||||||||||||||||||| Sbjct: 32526460 tcaccctcctcctcctcccg 32526479 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 443 cctcctcctcctcccgcgagctgctcca 470 ||||||||||||| |||||||| ||||| Sbjct: 7443782 cctcctcctcctcgcgcgagctcctcca 7443809
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 345 cctcctcctcgcactcgccg 364 |||||||||||||||||||| Sbjct: 26861506 cctcctcctcgcactcgccg 26861525
>gb|AC125017.12| Mus musculus chromosome 1, clone RP24-157E23, complete sequence Length = 189884 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 254 ggaagaaaggaaaagaaacccctg 277 ||||||||||||||||||| |||| Sbjct: 84853 ggaagaaaggaaaagaaacacctg 84876
>emb|AL935329.11| Zebrafish DNA sequence from clone CH211-253P2 in linkage group 12, complete sequence Length = 172778 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 341 cgctcctcctcctcgcactcgccg 364 ||||||||||| |||||||||||| Sbjct: 108953 cgctcctcctcttcgcactcgccg 108976
>gb|AC013718.6| Homo sapiens BAC clone RP11-116I17 from 2, complete sequence Length = 177855 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 467 tccagctcttctgcttcaag 486 |||||||||||||||||||| Sbjct: 54194 tccagctcttctgcttcaag 54213
>ref|NM_001025530.1| Danio rerio translocation protein 1 (tloc1), mRNA Length = 1335 Score = 40.1 bits (20), Expect = 7.4 Identities = 33/36 (91%), Gaps = 1/36 (2%) Strand = Plus / Minus Query: 443 cctcctcctcctcccgcgagctgctccagctcttct 478 |||||||||||||| | | ||||||||||||||||| Sbjct: 1203 cctcctcctcctcc-gtgtgctgctccagctcttct 1169
>dbj|AP005064.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0049G15 Length = 155303 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 392 agcgccgccaccgacgacgc 411 |||||||||||||||||||| Sbjct: 73783 agcgccgccaccgacgacgc 73802
>emb|AL732294.18| Mouse DNA sequence from clone RP23-59N7 on chromosome X, complete sequence Length = 112893 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 437 catcaccctcctcctcctcc 456 |||||||||||||||||||| Sbjct: 86656 catcaccctcctcctcctcc 86637
>dbj|AP004037.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1001_D02 Length = 129081 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 345 cctcctcctcgcactcgccg 364 |||||||||||||||||||| Sbjct: 40049 cctcctcctcgcactcgccg 40068
>dbj|AP003758.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1562_B11 Length = 112144 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 409 cgcgccgccgctatctccgacgcc 432 |||||||||||| ||||||||||| Sbjct: 81933 cgcgccgccgctgtctccgacgcc 81956
>dbj|AP004883.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0516F12 Length = 146364 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 345 cctcctcctcgcactcgccg 364 |||||||||||||||||||| Sbjct: 127559 cctcctcctcgcactcgccg 127578
>emb|BX647305.1|HSM807449 Homo sapiens mRNA; cDNA DKFZp686E24196 (from clone DKFZp686E24196) Length = 2440 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 ccagcttcttcctgttccac 118 |||||||||||||||||||| Sbjct: 751 ccagcttcttcctgttccac 732
>dbj|AP004557.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0028A08 Length = 150818 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 392 agcgccgccaccgacgacgc 411 |||||||||||||||||||| Sbjct: 75555 agcgccgccaccgacgacgc 75574
>dbj|D21163.1|HUMORFDA Homo sapiens KIAA0031 mRNA, partial cds Length = 3784 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 ccagcttcttcctgttccac 118 |||||||||||||||||||| Sbjct: 2203 ccagcttcttcctgttccac 2184
>dbj|AK122102.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033125K17, full insert sequence Length = 2702 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 392 agcgccgccaccgacgacgc 411 |||||||||||||||||||| Sbjct: 179 agcgccgccaccgacgacgc 160
>dbj|AK120317.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013055O12, full insert sequence Length = 2302 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 345 cctcctcctcgcactcgccg 364 |||||||||||||||||||| Sbjct: 984 cctcctcctcgcactcgccg 1003
>dbj|AP003845.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1699_E05 Length = 170666 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 409 cgcgccgccgctatctccgacgcc 432 |||||||||||| ||||||||||| Sbjct: 163203 cgcgccgccgctgtctccgacgcc 163226
>dbj|AK106623.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-113-B04, full insert sequence Length = 678 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 439 tcaccctcctcctcctcccg 458 |||||||||||||||||||| Sbjct: 109 tcaccctcctcctcctcccg 128
>dbj|AK072900.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023145A02, full insert sequence Length = 2722 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 345 cctcctcctcgcactcgccg 364 |||||||||||||||||||| Sbjct: 1429 cctcctcctcgcactcgccg 1448
>dbj|AK066248.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013055O11, full insert sequence Length = 2302 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 345 cctcctcctcgcactcgccg 364 |||||||||||||||||||| Sbjct: 984 cctcctcctcgcactcgccg 1003
>gb|AC154846.2| Mus musculus BAC clone RP23-45E1 from 14, complete sequence Length = 250542 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 433 gcatcatcaccctcctcctcctcc 456 |||||||||||||| ||||||||| Sbjct: 106895 gcatcatcaccctcttcctcctcc 106918
>emb|CR388080.12| Zebrafish DNA sequence from clone CH211-174H4 in linkage group 19, complete sequence Length = 153236 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 341 cgctcctcctcctcgcactcgccg 364 ||||||||||| |||||||||||| Sbjct: 96646 cgctcctcctcttcgcactcgccg 96669
>gb|AC093350.15| Mus musculus chromosome 3, clone RP23-16G3, complete sequence Length = 200326 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 437 catcaccctcctcctcctcc 456 |||||||||||||||||||| Sbjct: 185596 catcaccctcctcctcctcc 185577
>emb|CR388184.33| Zebrafish DNA sequence from clone CH211-261O3 in linkage group 8, complete sequence Length = 180216 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 341 cgctcctcctcctcgcactcgccg 364 ||||||||||| |||||||||||| Sbjct: 58377 cgctcctcctcttcgcactcgccg 58400
>emb|Z75094.1|SCYOR186W S.cerevisiae chromosome XV reading frame ORF YOR186w Length = 1923 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 251 cgtggaagaaaggaaaagaa 270 |||||||||||||||||||| Sbjct: 1445 cgtggaagaaaggaaaagaa 1464
>gb|AC174380.3| Mus musculus BAC clone RP24-196H4 from chromosome 7, complete sequence Length = 173395 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 255 gaagaaaggaaaagaaaccc 274 |||||||||||||||||||| Sbjct: 139337 gaagaaaggaaaagaaaccc 139318
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 440 caccctcctcctcctcccgc 459 |||||||||||||||||||| Sbjct: 16254904 caccctcctcctcctcccgc 16254885
>emb|BX323819.9| Zebrafish DNA sequence from clone CH211-132F19 in linkage group 17, complete sequence Length = 178951 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 464 tgctccagctcttctgcttc 483 |||||||||||||||||||| Sbjct: 156274 tgctccagctcttctgcttc 156293
>gb|AC116683.7| Mus musculus chromosome 7, clone RP24-472H13, complete sequence Length = 126085 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 gtggcagccagcttcttcct 111 |||||||||||||||||||| Sbjct: 67399 gtggcagccagcttcttcct 67418
>emb|AL954724.9| Zebrafish DNA sequence from clone CH211-265P12, complete sequence Length = 136892 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 341 cgctcctcctcctcgcactcgccg 364 ||||||||||| |||||||||||| Sbjct: 79074 cgctcctcctcttcgcactcgccg 79097
>gb|AE009442.1| Xylella fastidiosa Temecula1, complete genome Length = 2519802 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 425 ccgacgccgcatcatcaccc 444 |||||||||||||||||||| Sbjct: 651699 ccgacgccgcatcatcaccc 651680
>gb|AC130532.3| Mus musculus BAC clone RP23-189G24 from 7, complete sequence Length = 207333 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 122 ctcttctttctgttaggtgt 141 |||||||||||||||||||| Sbjct: 58456 ctcttctttctgttaggtgt 58475
>gb|AC121792.3| Mus musculus BAC clone RP23-404J7 from 3, complete sequence Length = 191723 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 437 catcaccctcctcctcctcc 456 |||||||||||||||||||| Sbjct: 163430 catcaccctcctcctcctcc 163449
>emb|AJ505017.1|HSA505017 Homo sapiens mRNA for U5 small nuclear ribonucleoprotein component (SNRP116 gene), trancript variant 2 Length = 2918 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 ccagcttcttcctgttccac 118 |||||||||||||||||||| Sbjct: 1778 ccagcttcttcctgttccac 1759
>emb|AL772300.10| Zebrafish DNA sequence from clone CH211-165G14, complete sequence Length = 155951 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 341 cgctcctcctcctcgcactcgccg 364 ||||||||||| |||||||||||| Sbjct: 84095 cgctcctcctcttcgcactcgccg 84118
>emb|AL670720.7| Mouse DNA sequence from clone RP23-321M9 on chromosome 4, complete sequence Length = 200628 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 434 catcatcaccctcctcctcctccc 457 |||||||||| ||||||||||||| Sbjct: 109176 catcatcaccatcctcctcctccc 109199
>emb|AL731831.17| Mouse DNA sequence from clone RP23-105O13 on chromosome 2, complete sequence Length = 218818 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 472 ctcttctgcttcaagaagcc 491 |||||||||||||||||||| Sbjct: 77789 ctcttctgcttcaagaagcc 77770 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7,027,644 Number of Sequences: 3902068 Number of extensions: 7027644 Number of successful extensions: 481233 Number of sequences better than 10.0: 158 Number of HSP's better than 10.0 without gapping: 160 Number of HSP's successfully gapped in prelim test: 3 Number of HSP's that attempted gapping in prelim test: 476547 Number of HSP's gapped (non-prelim): 4685 length of query: 543 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 520 effective length of database: 17,143,297,704 effective search space: 8914514806080 effective search space used: 8914514806080 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
