ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart48g05 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_462955.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1011 Score = 607 bits (306), Expect = e-170 Identities = 431/472 (91%), Gaps = 3/472 (0%) Strand = Plus / Plus Query: 103 ccgccttcgccggcgccaacgacctggtcggcgagctccagtccctccgctcccgctccc 162 |||||| |||||||||| | |||||||||| |||||| || ||||| || |||||||||| Sbjct: 59 ccgcctccgccggcgccgatgacctggtcgccgagctgcaatccctgcggtcccgctccc 118 Query: 163 cctcgggggtggtccacctcaccgacacctccgtcacccgcttcctctcgtc---ggcct 219 | ||||| ||| |||||||||||||||||||| ||||||||||||| || | ||| Sbjct: 119 cgtcgggcgtgatccacctcaccgacacctccatcacccgcttcctatccgccccggcgc 178 Query: 220 cgcgcccctactccgtcctcgtcttcttcgacgccacctcgctccactccaagaccgacc 279 |||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||| Sbjct: 179 cgcgcccctactccgtgctcgtcttcttcgacgccgcctcgctccactccaagaccgacc 238 Query: 280 tccacctcccccagctccgccgcgagttcgcgctcctctccgcctccttccacgccaaca 339 ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||| ||| Sbjct: 239 tccacctcccccagctccgccgcgagttcgccctcctctccgcctccttcctcgcccaca 298 Query: 340 accccgactcctccgacctcttcttcgccgacatcgagttctccgagtcgcagcactcct 399 |||||| |||| ||||||||||||||||||||||||||||||| |||||||||||||| | Sbjct: 299 accccgcctccgccgacctcttcttcgccgacatcgagttctcggagtcgcagcactcgt 358 Query: 400 tctcccagttcggcgtcaactccctcccccatgtccgcctcatccgcccggagcactccc 459 || | |||||||||||||||||||||||||| ||||||||| ||||||| |||||| ||| Sbjct: 359 tcgcgcagttcggcgtcaactccctcccccacgtccgcctcgtccgccccgagcacaccc 418 Query: 460 gcctcgccgactccgagcagatggaccagtcccacttctcccgcctcgccgattccatgg 519 ||||||| | |||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 419 gcctcgctggctccgagcagatggaccagtcccacttctcccgcctcgccgactccatgg 478 Query: 520 tcgagttcgtggaggcccgcaccggcctcgaggtcggccccatcgtccgccc 571 |||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 479 cggagttcgtggagtcccgcaccggcctcgaggtcggccccatcgtccgccc 530
>gb|AC016781.6| Oryza sativa (japonica cultivar-group) clone OSJNBa0084C09, complete sequence Length = 151269 Score = 607 bits (306), Expect = e-170 Identities = 431/472 (91%), Gaps = 3/472 (0%) Strand = Plus / Minus Query: 103 ccgccttcgccggcgccaacgacctggtcggcgagctccagtccctccgctcccgctccc 162 |||||| |||||||||| | |||||||||| |||||| || ||||| || |||||||||| Sbjct: 95490 ccgcctccgccggcgccgatgacctggtcgccgagctgcaatccctgcggtcccgctccc 95431 Query: 163 cctcgggggtggtccacctcaccgacacctccgtcacccgcttcctctcgtc---ggcct 219 | ||||| ||| |||||||||||||||||||| ||||||||||||| || | ||| Sbjct: 95430 cgtcgggcgtgatccacctcaccgacacctccatcacccgcttcctatccgccccggcgc 95371 Query: 220 cgcgcccctactccgtcctcgtcttcttcgacgccacctcgctccactccaagaccgacc 279 |||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||| Sbjct: 95370 cgcgcccctactccgtgctcgtcttcttcgacgccgcctcgctccactccaagaccgacc 95311 Query: 280 tccacctcccccagctccgccgcgagttcgcgctcctctccgcctccttccacgccaaca 339 ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||| ||| Sbjct: 95310 tccacctcccccagctccgccgcgagttcgccctcctctccgcctccttcctcgcccaca 95251 Query: 340 accccgactcctccgacctcttcttcgccgacatcgagttctccgagtcgcagcactcct 399 |||||| |||| ||||||||||||||||||||||||||||||| |||||||||||||| | Sbjct: 95250 accccgcctccgccgacctcttcttcgccgacatcgagttctcggagtcgcagcactcgt 95191 Query: 400 tctcccagttcggcgtcaactccctcccccatgtccgcctcatccgcccggagcactccc 459 || | |||||||||||||||||||||||||| ||||||||| ||||||| |||||| ||| Sbjct: 95190 tcgcgcagttcggcgtcaactccctcccccacgtccgcctcgtccgccccgagcacaccc 95131 Query: 460 gcctcgccgactccgagcagatggaccagtcccacttctcccgcctcgccgattccatgg 519 ||||||| | |||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 95130 gcctcgctggctccgagcagatggaccagtcccacttctcccgcctcgccgactccatgg 95071 Query: 520 tcgagttcgtggaggcccgcaccggcctcgaggtcggccccatcgtccgccc 571 |||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 95070 cggagttcgtggagtcccgcaccggcctcgaggtcggccccatcgtccgccc 95019
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 607 bits (306), Expect = e-170 Identities = 431/472 (91%), Gaps = 3/472 (0%) Strand = Plus / Minus Query: 103 ccgccttcgccggcgccaacgacctggtcggcgagctccagtccctccgctcccgctccc 162 |||||| |||||||||| | |||||||||| |||||| || ||||| || |||||||||| Sbjct: 20177406 ccgcctccgccggcgccgatgacctggtcgccgagctgcaatccctgcggtcccgctccc 20177347 Query: 163 cctcgggggtggtccacctcaccgacacctccgtcacccgcttcctctcgtc---ggcct 219 | ||||| ||| |||||||||||||||||||| ||||||||||||| || | ||| Sbjct: 20177346 cgtcgggcgtgatccacctcaccgacacctccatcacccgcttcctatccgccccggcgc 20177287 Query: 220 cgcgcccctactccgtcctcgtcttcttcgacgccacctcgctccactccaagaccgacc 279 |||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||| Sbjct: 20177286 cgcgcccctactccgtgctcgtcttcttcgacgccgcctcgctccactccaagaccgacc 20177227 Query: 280 tccacctcccccagctccgccgcgagttcgcgctcctctccgcctccttccacgccaaca 339 ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||| ||| Sbjct: 20177226 tccacctcccccagctccgccgcgagttcgccctcctctccgcctccttcctcgcccaca 20177167 Query: 340 accccgactcctccgacctcttcttcgccgacatcgagttctccgagtcgcagcactcct 399 |||||| |||| ||||||||||||||||||||||||||||||| |||||||||||||| | Sbjct: 20177166 accccgcctccgccgacctcttcttcgccgacatcgagttctcggagtcgcagcactcgt 20177107 Query: 400 tctcccagttcggcgtcaactccctcccccatgtccgcctcatccgcccggagcactccc 459 || | |||||||||||||||||||||||||| ||||||||| ||||||| |||||| ||| Sbjct: 20177106 tcgcgcagttcggcgtcaactccctcccccacgtccgcctcgtccgccccgagcacaccc 20177047 Query: 460 gcctcgccgactccgagcagatggaccagtcccacttctcccgcctcgccgattccatgg 519 ||||||| | |||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 20177046 gcctcgctggctccgagcagatggaccagtcccacttctcccgcctcgccgactccatgg 20176987 Query: 520 tcgagttcgtggaggcccgcaccggcctcgaggtcggccccatcgtccgccc 571 |||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 20176986 cggagttcgtggagtcccgcaccggcctcgaggtcggccccatcgtccgccc 20176935 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 60 ccccacctcctcctcccgctcctcctc 86 ||||||||||||||||| ||||||||| Sbjct: 6444674 ccccacctcctcctccccctcctcctc 6444648 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 58 ccccccacctcctcctcccgctcctcctc 86 |||||||||||||||||| ||||||||| Sbjct: 27520809 ccccccacctcctcctcctcctcctcctc 27520837 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 96 gccgcctccgccttcgccggcgcca 120 ||||||||||||||||||| ||||| Sbjct: 1621349 gccgcctccgccttcgccgccgcca 1621373 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 59 cccccacctcctcctcccgctcctcctc 86 ||||||||||||||||| ||||||||| Sbjct: 10656811 cccccacctcctcctcctcctcctcctc 10656784
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 607 bits (306), Expect = e-170 Identities = 431/472 (91%), Gaps = 3/472 (0%) Strand = Plus / Minus Query: 103 ccgccttcgccggcgccaacgacctggtcggcgagctccagtccctccgctcccgctccc 162 |||||| |||||||||| | |||||||||| |||||| || ||||| || |||||||||| Sbjct: 20170433 ccgcctccgccggcgccgatgacctggtcgccgagctgcaatccctgcggtcccgctccc 20170374 Query: 163 cctcgggggtggtccacctcaccgacacctccgtcacccgcttcctctcgtc---ggcct 219 | ||||| ||| |||||||||||||||||||| ||||||||||||| || | ||| Sbjct: 20170373 cgtcgggcgtgatccacctcaccgacacctccatcacccgcttcctatccgccccggcgc 20170314 Query: 220 cgcgcccctactccgtcctcgtcttcttcgacgccacctcgctccactccaagaccgacc 279 |||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||| Sbjct: 20170313 cgcgcccctactccgtgctcgtcttcttcgacgccgcctcgctccactccaagaccgacc 20170254 Query: 280 tccacctcccccagctccgccgcgagttcgcgctcctctccgcctccttccacgccaaca 339 ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||| ||| Sbjct: 20170253 tccacctcccccagctccgccgcgagttcgccctcctctccgcctccttcctcgcccaca 20170194 Query: 340 accccgactcctccgacctcttcttcgccgacatcgagttctccgagtcgcagcactcct 399 |||||| |||| ||||||||||||||||||||||||||||||| |||||||||||||| | Sbjct: 20170193 accccgcctccgccgacctcttcttcgccgacatcgagttctcggagtcgcagcactcgt 20170134 Query: 400 tctcccagttcggcgtcaactccctcccccatgtccgcctcatccgcccggagcactccc 459 || | |||||||||||||||||||||||||| ||||||||| ||||||| |||||| ||| Sbjct: 20170133 tcgcgcagttcggcgtcaactccctcccccacgtccgcctcgtccgccccgagcacaccc 20170074 Query: 460 gcctcgccgactccgagcagatggaccagtcccacttctcccgcctcgccgattccatgg 519 ||||||| | |||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 20170073 gcctcgctggctccgagcagatggaccagtcccacttctcccgcctcgccgactccatgg 20170014 Query: 520 tcgagttcgtggaggcccgcaccggcctcgaggtcggccccatcgtccgccc 571 |||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 20170013 cggagttcgtggagtcccgcaccggcctcgaggtcggccccatcgtccgccc 20169962 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 60 ccccacctcctcctcccgctcctcctc 86 ||||||||||||||||| ||||||||| Sbjct: 6443887 ccccacctcctcctccccctcctcctc 6443861 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 58 ccccccacctcctcctcccgctcctcctc 86 |||||||||||||||||| ||||||||| Sbjct: 27612132 ccccccacctcctcctcctcctcctcctc 27612160 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 96 gccgcctccgccttcgccggcgcca 120 ||||||||||||||||||| ||||| Sbjct: 1621347 gccgcctccgccttcgccgccgcca 1621371 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 59 cccccacctcctcctcccgctcctcctc 86 ||||||||||||||||| ||||||||| Sbjct: 10654912 cccccacctcctcctcctcctcctcctc 10654885
>dbj|AK109347.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-G06, full insert sequence Length = 1273 Score = 607 bits (306), Expect = e-170 Identities = 431/472 (91%), Gaps = 3/472 (0%) Strand = Plus / Plus Query: 103 ccgccttcgccggcgccaacgacctggtcggcgagctccagtccctccgctcccgctccc 162 |||||| |||||||||| | |||||||||| |||||| || ||||| || |||||||||| Sbjct: 77 ccgcctccgccggcgccgatgacctggtcgccgagctgcaatccctgcggtcccgctccc 136 Query: 163 cctcgggggtggtccacctcaccgacacctccgtcacccgcttcctctcgtc---ggcct 219 | ||||| ||| |||||||||||||||||||| ||||||||||||| || | ||| Sbjct: 137 cgtcgggcgtgatccacctcaccgacacctccatcacccgcttcctatccgccccggcgc 196 Query: 220 cgcgcccctactccgtcctcgtcttcttcgacgccacctcgctccactccaagaccgacc 279 |||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||| Sbjct: 197 cgcgcccctactccgtgctcgtcttcttcgacgccgcctcgctccactccaagaccgacc 256 Query: 280 tccacctcccccagctccgccgcgagttcgcgctcctctccgcctccttccacgccaaca 339 ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||| ||| Sbjct: 257 tccacctcccccagctccgccgcgagttcgccctcctctccgcctccttcctcgcccaca 316 Query: 340 accccgactcctccgacctcttcttcgccgacatcgagttctccgagtcgcagcactcct 399 |||||| |||| ||||||||||||||||||||||||||||||| |||||||||||||| | Sbjct: 317 accccgcctccgccgacctcttcttcgccgacatcgagttctcggagtcgcagcactcgt 376 Query: 400 tctcccagttcggcgtcaactccctcccccatgtccgcctcatccgcccggagcactccc 459 || | |||||||||||||||||||||||||| ||||||||| ||||||| |||||| ||| Sbjct: 377 tcgcgcagttcggcgtcaactccctcccccacgtccgcctcgtccgccccgagcacaccc 436 Query: 460 gcctcgccgactccgagcagatggaccagtcccacttctcccgcctcgccgattccatgg 519 ||||||| | |||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 437 gcctcgctggctccgagcagatggaccagtcccacttctcccgcctcgccgactccatgg 496 Query: 520 tcgagttcgtggaggcccgcaccggcctcgaggtcggccccatcgtccgccc 571 |||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 497 cggagttcgtggagtcccgcaccggcctcgaggtcggccccatcgtccgccc 548
>dbj|AK102421.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033093D18, full insert sequence Length = 1398 Score = 607 bits (306), Expect = e-170 Identities = 431/472 (91%), Gaps = 3/472 (0%) Strand = Plus / Plus Query: 103 ccgccttcgccggcgccaacgacctggtcggcgagctccagtccctccgctcccgctccc 162 |||||| |||||||||| | |||||||||| |||||| || ||||| || |||||||||| Sbjct: 97 ccgcctccgccggcgccgatgacctggtcgccgagctgcaatccctgcggtcccgctccc 156 Query: 163 cctcgggggtggtccacctcaccgacacctccgtcacccgcttcctctcgtc---ggcct 219 | ||||| ||| |||||||||||||||||||| ||||||||||||| || | ||| Sbjct: 157 cgtcgggcgtgatccacctcaccgacacctccatcacccgcttcctatccgccccggcgc 216 Query: 220 cgcgcccctactccgtcctcgtcttcttcgacgccacctcgctccactccaagaccgacc 279 |||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||| Sbjct: 217 cgcgcccctactccgtgctcgtcttcttcgacgccgcctcgctccactccaagaccgacc 276 Query: 280 tccacctcccccagctccgccgcgagttcgcgctcctctccgcctccttccacgccaaca 339 ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||| ||| Sbjct: 277 tccacctcccccagctccgccgcgagttcgccctcctctccgcctccttcctcgcccaca 336 Query: 340 accccgactcctccgacctcttcttcgccgacatcgagttctccgagtcgcagcactcct 399 |||||| |||| ||||||||||||||||||||||||||||||| |||||||||||||| | Sbjct: 337 accccgcctccgccgacctcttcttcgccgacatcgagttctcggagtcgcagcactcgt 396 Query: 400 tctcccagttcggcgtcaactccctcccccatgtccgcctcatccgcccggagcactccc 459 || | |||||||||||||||||||||||||| ||||||||| ||||||| |||||| ||| Sbjct: 397 tcgcgcagttcggcgtcaactccctcccccacgtccgcctcgtccgccccgagcacaccc 456 Query: 460 gcctcgccgactccgagcagatggaccagtcccacttctcccgcctcgccgattccatgg 519 ||||||| | |||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 457 gcctcgctggctccgagcagatggaccagtcccacttctcccgcctcgccgactccatgg 516 Query: 520 tcgagttcgtggaggcccgcaccggcctcgaggtcggccccatcgtccgccc 571 |||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 517 cggagttcgtggagtcccgcaccggcctcgaggtcggccccatcgtccgccc 568
>dbj|AK061364.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-304-D03, full insert sequence Length = 1328 Score = 607 bits (306), Expect = e-170 Identities = 431/472 (91%), Gaps = 3/472 (0%) Strand = Plus / Plus Query: 103 ccgccttcgccggcgccaacgacctggtcggcgagctccagtccctccgctcccgctccc 162 |||||| |||||||||| | |||||||||| |||||| || ||||| || |||||||||| Sbjct: 92 ccgcctccgccggcgccgatgacctggtcgccgagctgcaatccctgcggtcccgctccc 151 Query: 163 cctcgggggtggtccacctcaccgacacctccgtcacccgcttcctctcgtc---ggcct 219 | ||||| ||| |||||||||||||||||||| ||||||||||||| || | ||| Sbjct: 152 cgtcgggcgtgatccacctcaccgacacctccatcacccgcttcctatccgccccggcgc 211 Query: 220 cgcgcccctactccgtcctcgtcttcttcgacgccacctcgctccactccaagaccgacc 279 |||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||| Sbjct: 212 cgcgcccctactccgtgctcgtcttcttcgacgccgcctcgctccactccaagaccgacc 271 Query: 280 tccacctcccccagctccgccgcgagttcgcgctcctctccgcctccttccacgccaaca 339 ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||| ||| Sbjct: 272 tccacctcccccagctccgccgcgagttcgccctcctctccgcctccttcctcgcccaca 331 Query: 340 accccgactcctccgacctcttcttcgccgacatcgagttctccgagtcgcagcactcct 399 |||||| |||| ||||||||||||||||||||||||||||||| |||||||||||||| | Sbjct: 332 accccgcctccgccgacctcttcttcgccgacatcgagttctcggagtcgcagcactcgt 391 Query: 400 tctcccagttcggcgtcaactccctcccccatgtccgcctcatccgcccggagcactccc 459 || | |||||||||||||||||||||||||| ||||||||| ||||||| |||||| ||| Sbjct: 392 tcgcgcagttcggcgtcaactccctcccccacgtccgcctcgtccgccccgagcacaccc 451 Query: 460 gcctcgccgactccgagcagatggaccagtcccacttctcccgcctcgccgattccatgg 519 ||||||| | |||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 452 gcctcgctggctccgagcagatggaccagtcccacttctcccgcctcgccgactccatgg 511 Query: 520 tcgagttcgtggaggcccgcaccggcctcgaggtcggccccatcgtccgccc 571 |||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 512 cggagttcgtggagtcccgcaccggcctcgaggtcggccccatcgtccgccc 563
>gb|BT017829.1| Zea mays clone EL01N0508G07.c mRNA sequence Length = 1374 Score = 323 bits (163), Expect = 4e-85 Identities = 374/443 (84%), Gaps = 6/443 (1%) Strand = Plus / Plus Query: 135 gagctccagtccctccgctcccgctccccctcgggggtggtccacctcaccgacacctcc 194 |||||||| || |||||| | || ||||| || || ||| |||||||||||||||||||| Sbjct: 134 gagctccaatctctccgcgcgcggtccccgtccggcgtgatccacctcaccgacacctcc 193 Query: 195 gtcacccgcttcctctcgtcggcct-cgcgc-----ccctactccgtcctcgtcttcttc 248 |||||||| |||||||| | ||| ||||| ||||||||||| ||||| |||||| Sbjct: 194 gtcacccgtttcctctccgccccctccgcgcgccgcccctactccgtgctcgtattcttc 253 Query: 249 gacgccacctcgctccactccaagaccgacctccacctcccccagctccgccgcgagttc 308 |||||| | ||||||||||| ||| | ||||||||||| |||||||||||| ||||||| Sbjct: 254 gacgccgcttcgctccactcaaagcctgacctccacctgccccagctccgcaccgagttc 313 Query: 309 gcgctcctctccgcctccttccacgccaacaaccccgactcctccgacctcttcttcgcc 368 |||||||||||||||||||||| ||| |||||||||| || |||||||||||||||| Sbjct: 314 gcgctcctctccgcctccttcctcgctcacaaccccgattctggcgacctcttcttcgcc 373 Query: 369 gacatcgagttctccgagtcgcagcactccttctcccagttcggcgtcaactccctcccc 428 |||||||||||| ||||||||||||||||||| |||||| || |||||||| || ||| Sbjct: 374 gacatcgagttcgccgagtcgcagcactcctttcaccagtttggtgtcaactcgctgccc 433 Query: 429 catgtccgcctcatccgcccggagcactcccgcctcgccgactccgagcagatggaccag 488 ||| ||||||||||||| | || ||| || ||| | | |||||||||||||||||| Sbjct: 434 catatccgcctcatccgttccgatcacgccaccctgtcgggatccgagcagatggaccag 493 Query: 489 tcccacttctcccgcctcgccgattccatggtcgagttcgtggaggcccgcaccggcctc 548 ||||||||| | ||||||||||| ||||||| |||||| | ||| ||||||| |||||| Sbjct: 494 tcccacttcgcgcgcctcgccgactccatggccgagtttatcgagtcccgcacgggcctc 553 Query: 549 gaggtcggccccatcgtccgccc 571 |||||||| |||||||| ||||| Sbjct: 554 gaggtcgggcccatcgtacgccc 576
>gb|DQ296190.1| Brassica rapa clone 55 unknown mRNA Length = 1189 Score = 73.8 bits (37), Expect = 6e-10 Identities = 97/117 (82%) Strand = Plus / Plus Query: 225 ccctactccgtcctcgtcttcttcgacgccacctcgctccactccaagaccgacctccac 284 |||||||| ||||| |||||||||||||||| ||||||| ||| ||||| |||| Sbjct: 228 ccctactcaatcctcctcttcttcgacgccactcagctccacagcaaaaccgagctccgt 287 Query: 285 ctcccccagctccgccgcgagttcgcgctcctctccgcctccttccacgccaacaac 341 |||| |||||||||||||||||| ||| |||||||| |||||| |||||||||| Sbjct: 288 ctccaagagctccgccgcgagttcggcctcgtctccgccaccttcctcgccaacaac 344
>ref|XM_633468.1| Dictyostelium discoideum hypothetical protein (DDB0218619), partial mRNA Length = 4788 Score = 48.1 bits (24), Expect = 0.032 Identities = 27/28 (96%) Strand = Plus / Minus Query: 59 cccccacctcctcctcccgctcctcctc 86 |||||||||||||||||| ||||||||| Sbjct: 968 cccccacctcctcctccccctcctcctc 941
>gb|AY023244.1| Oryza sativa microsatellite MRG5569 containing (GGA)X8, closest to marker RG541, genomic sequence Length = 224 Score = 48.1 bits (24), Expect = 0.032 Identities = 24/24 (100%) Strand = Plus / Minus Query: 65 cctcctcctcccgctcctcctcgc 88 |||||||||||||||||||||||| Sbjct: 111 cctcctcctcccgctcctcctcgc 88
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 48.1 bits (24), Expect = 0.032 Identities = 24/24 (100%) Strand = Plus / Plus Query: 65 cctcctcctcccgctcctcctcgc 88 |||||||||||||||||||||||| Sbjct: 32019584 cctcctcctcccgctcctcctcgc 32019607 Score = 44.1 bits (22), Expect = 0.50 Identities = 28/30 (93%) Strand = Plus / Minus Query: 59 cccccacctcctcctcccgctcctcctcgc 88 ||||||||||||||||| ||||||||||| Sbjct: 43231640 cccccacctcctcctcctcctcctcctcgc 43231611 Score = 44.1 bits (22), Expect = 0.50 Identities = 28/30 (93%) Strand = Plus / Plus Query: 55 tctccccccacctcctcctcccgctcctcc 84 ||||||||| |||||||||||| ||||||| Sbjct: 20064057 tctcccccctcctcctcctccccctcctcc 20064086 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 144 tccctccgctcccgctccccc 164 ||||||||||||||||||||| Sbjct: 26812838 tccctccgctcccgctccccc 26812818 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 70 tcctcccgctcctcctcgcggcggc 94 |||||||||||||||||||| |||| Sbjct: 24405109 tcctcccgctcctcctcgcgtcggc 24405085 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 77 gctcctcctcgcggcggctgccgcc 101 |||||||||||| |||||||||||| Sbjct: 21269899 gctcctcctcgccgcggctgccgcc 21269875 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 ctgccgcctccgccttcgcc 113 |||||||||||||||||||| Sbjct: 10087584 ctgccgcctccgccttcgcc 10087565 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 65 cctcctcctcccgctcctcctcgc 88 ||||||||||| |||||||||||| Sbjct: 8890373 cctcctcctcctgctcctcctcgc 8890350 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 60 ccccacctcctcctcccgctcctcctcg 87 |||||||||||||||| |||||||||| Sbjct: 5215602 ccccacctcctcctcctcctcctcctcg 5215575
>dbj|AP003274.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0512C01 Length = 176261 Score = 48.1 bits (24), Expect = 0.032 Identities = 24/24 (100%) Strand = Plus / Plus Query: 65 cctcctcctcccgctcctcctcgc 88 |||||||||||||||||||||||| Sbjct: 61398 cctcctcctcccgctcctcctcgc 61421
>dbj|AP003256.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0460E08 Length = 170021 Score = 48.1 bits (24), Expect = 0.032 Identities = 24/24 (100%) Strand = Plus / Plus Query: 65 cctcctcctcccgctcctcctcgc 88 |||||||||||||||||||||||| Sbjct: 116311 cctcctcctcccgctcctcctcgc 116334
>gb|AC125105.3| Mus musculus BAC clone RP24-220B7 from chromosome 16, complete sequence Length = 153616 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Plus Query: 56 ctccccccacctcctcctcccgctcctcctc 86 |||||||| |||||||||||| ||||||||| Sbjct: 127199 ctcccccctcctcctcctccccctcctcctc 127229 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 59 cccccacctcctcctcccgctcctcctc 86 ||||| |||||||||||| ||||||||| Sbjct: 127174 ccccctcctcctcctccccctcctcctc 127201 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 59 cccccacctcctcctcccgctcctcctc 86 ||||| |||||||||||| ||||||||| Sbjct: 127159 ccccctcctcctcctccccctcctcctc 127186
>gb|AC164618.3| Mus musculus BAC clone RP23-304L22 from chromosome 14, complete sequence Length = 208291 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Minus Query: 56 ctccccccacctcctcctcccgctcctcctc 86 |||||||| |||||||||||| ||||||||| Sbjct: 165828 ctccccccccctcctcctccccctcctcctc 165798
>gb|AC116119.12| Mus musculus chromosome 12, clone RP23-76D19, complete sequence Length = 264410 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Minus Query: 56 ctccccccacctcctcctcccgctcctcctc 86 |||||||| |||||||||||| ||||||||| Sbjct: 80420 ctcccccctcctcctcctccccctcctcctc 80390
>gb|AC113010.10| Mus musculus chromosome 18, clone RP23-172F6, complete sequence Length = 246921 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Minus Query: 56 ctccccccacctcctcctcccgctcctcctc 86 |||||||| |||||||||||| ||||||||| Sbjct: 123163 ctcccccctcctcctcctccccctcctcctc 123133
>gb|AC105364.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1743A09, complete sequence Length = 146568 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 60 ccccacctcctcctcccgctcctcctc 86 ||||||||||||||||| ||||||||| Sbjct: 124800 ccccacctcctcctccccctcctcctc 124774
>gb|AC154847.2| Mus musculus BAC clone RP23-38J13 from chromosome 13, complete sequence Length = 200027 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Minus Query: 56 ctccccccacctcctcctcccgctcctcctc 86 |||||||| |||||||||||| ||||||||| Sbjct: 95439 ctcccccctcctcctcctccccctcctcctc 95409
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 46.1 bits (23), Expect = 0.13 Identities = 33/35 (94%), Gaps = 1/35 (2%) Strand = Plus / Plus Query: 66 ctcctcctcccgctcctcctcgcg-gcggctgccg 99 ||||||||||| |||||||||||| |||||||||| Sbjct: 2601542 ctcctcctccctctcctcctcgcgcgcggctgccg 2601576 Score = 44.1 bits (22), Expect = 0.50 Identities = 28/30 (93%) Strand = Plus / Minus Query: 65 cctcctcctcccgctcctcctcgcggcggc 94 ||||||||||| ||||||||||||||||| Sbjct: 16748385 cctcctcctcctcctcctcctcgcggcggc 16748356 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 ctgccgcctccgccttcgcc 113 |||||||||||||||||||| Sbjct: 18471031 ctgccgcctccgccttcgcc 18471050 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 58 ccccccacctcctcctcccgctcc 81 |||||| ||||||||||||||||| Sbjct: 242091 ccccccgcctcctcctcccgctcc 242114
>dbj|AK072885.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023149P08, full insert sequence Length = 1502 Score = 46.1 bits (23), Expect = 0.13 Identities = 33/35 (94%), Gaps = 1/35 (2%) Strand = Plus / Plus Query: 66 ctcctcctcccgctcctcctcgcg-gcggctgccg 99 ||||||||||| |||||||||||| |||||||||| Sbjct: 36 ctcctcctccctctcctcctcgcgcgcggctgccg 70
>dbj|AK073401.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033044P20, full insert sequence Length = 2843 Score = 46.1 bits (23), Expect = 0.13 Identities = 33/35 (94%), Gaps = 1/35 (2%) Strand = Plus / Plus Query: 66 ctcctcctcccgctcctcctcgcg-gcggctgccg 99 ||||||||||| |||||||||||| |||||||||| Sbjct: 142 ctcctcctccctctcctcctcgcgcgcggctgccg 176
>dbj|AK071572.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023105E11, full insert sequence Length = 1577 Score = 46.1 bits (23), Expect = 0.13 Identities = 33/35 (94%), Gaps = 1/35 (2%) Strand = Plus / Plus Query: 66 ctcctcctcccgctcctcctcgcg-gcggctgccg 99 ||||||||||| |||||||||||| |||||||||| Sbjct: 29 ctcctcctccctctcctcctcgcgcgcggctgccg 63
>dbj|AK068416.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013154C20, full insert sequence Length = 2904 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 60 ccccacctcctcctcccgctcctcctc 86 ||||||||||||||||| ||||||||| Sbjct: 18 ccccacctcctcctccccctcctcctc 44
>gb|AC141567.4| Mus musculus BAC clone RP23-9D13 from 14, complete sequence Length = 248787 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Minus Query: 56 ctccccccacctcctcctcccgctcctcctc 86 |||||||| |||||||||||| ||||||||| Sbjct: 28286 ctccccccccctcctcctccccctcctcctc 28256
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 46.1 bits (23), Expect = 0.13 Identities = 33/35 (94%), Gaps = 1/35 (2%) Strand = Plus / Plus Query: 66 ctcctcctcccgctcctcctcgcg-gcggctgccg 99 ||||||||||| |||||||||||| |||||||||| Sbjct: 2601486 ctcctcctccctctcctcctcgcgcgcggctgccg 2601520 Score = 44.1 bits (22), Expect = 0.50 Identities = 28/30 (93%) Strand = Plus / Minus Query: 65 cctcctcctcccgctcctcctcgcggcggc 94 ||||||||||| ||||||||||||||||| Sbjct: 16701618 cctcctcctcctcctcctcctcgcggcggc 16701589 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 ctgccgcctccgccttcgcc 113 |||||||||||||||||||| Sbjct: 18397257 ctgccgcctccgccttcgcc 18397276 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 58 ccccccacctcctcctcccgctcc 81 |||||| ||||||||||||||||| Sbjct: 242091 ccccccgcctcctcctcccgctcc 242114
>emb|AL929350.3|CNS08CCE Oryza sativa chromosome 12, . BAC OSJNBb0104J15 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 136490 Score = 46.1 bits (23), Expect = 0.13 Identities = 33/35 (94%), Gaps = 1/35 (2%) Strand = Plus / Minus Query: 66 ctcctcctcccgctcctcctcgcg-gcggctgccg 99 ||||||||||| |||||||||||| |||||||||| Sbjct: 66467 ctcctcctccctctcctcctcgcgcgcggctgccg 66433
>gb|AC125066.5| Mus musculus BAC clone RP23-430N17 from 16, complete sequence Length = 197813 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Minus Query: 56 ctccccccacctcctcctcccgctcctcctc 86 |||||||| |||||||||||| ||||||||| Sbjct: 187247 ctcccccctcctcctcctccccctcctcctc 187217 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 59 cccccacctcctcctcccgctcctcctc 86 ||||| |||||||||||| ||||||||| Sbjct: 187287 ccccctcctcctcctccccctcctcctc 187260 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 59 cccccacctcctcctcccgctcctcctc 86 ||||| |||||||||||| ||||||||| Sbjct: 187272 ccccctcctcctcctccccctcctcctc 187245
>emb|AL663117.14| Mouse DNA sequence from clone RP23-217A20 on chromosome 11, complete sequence Length = 148291 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Minus Query: 56 ctccccccacctcctcctcccgctcctcctc 86 |||||||| |||||||||||| ||||||||| Sbjct: 101725 ctcccccctcctcctcctccccctcctcctc 101695
>emb|AL669851.8| Mouse DNA sequence from clone RP23-18K13 on chromosome X, complete sequence Length = 204557 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Minus Query: 78 ctcctcctcgcggcggctgccgcctccgcct 108 ||||||||||| ||||| ||||||||||||| Sbjct: 27353 ctcctcctcgctgcggccgccgcctccgcct 27323
>gb|AC165972.4| Mus musculus BAC clone RP23-87D12 from chromosome 17, complete sequence Length = 199737 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 65 cctcctcctcccgctcctcctc 86 |||||||||||||||||||||| Sbjct: 179304 cctcctcctcccgctcctcctc 179325 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 65 cctcctcctcccgctcctcctc 86 |||||||||||||||||||||| Sbjct: 179226 cctcctcctcccgctcctcctc 179247 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 65 cctcctcctcccgctcctcctc 86 |||||||||||||||||||||| Sbjct: 178222 cctcctcctcccgctcctcctc 178243 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 66 ctcctcctcccgctcctcctc 86 ||||||||||||||||||||| Sbjct: 179212 ctcctcctcccgctcctcctc 179232
>gb|AF061032.1| Homo sapiens cosmid 223D9 from Xq28, complete sequence Length = 37581 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 66 ctcctcctcccgctcctcctcg 87 |||||||||||||||||||||| Sbjct: 6500 ctcctcctcccgctcctcctcg 6479
>ref|XM_324065.1| Neurospora crassa OR74A predicted protein (NCU04709.1) partial mRNA Length = 384 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 65 cctcctcctcccgctcctcctc 86 |||||||||||||||||||||| Sbjct: 76 cctcctcctcccgctcctcctc 55
>ref|XM_955147.1| Neurospora crassa OR74A hypothetical protein (NCU04709.1) partial mRNA Length = 384 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 65 cctcctcctcccgctcctcctc 86 |||||||||||||||||||||| Sbjct: 76 cctcctcctcccgctcctcctc 55
>gb|AC011309.5| Homo sapiens BAC clone CTD-2503O24 from 7, complete sequence Length = 112863 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 65 cctcctcctcccgctcctcctc 86 |||||||||||||||||||||| Sbjct: 51143 cctcctcctcccgctcctcctc 51122
>gb|AY518539.1| Homo sapiens insulin-like growth factor binding protein 7 (IGFBP7) gene, complete cds Length = 82343 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 54 atctccccccacctcctcctcc 75 |||||||||||||||||||||| Sbjct: 76062 atctccccccacctcctcctcc 76083
>emb|CT025632.2| Pan troglodytes chromosome X clone PTB-029A18 map Xq28, complete sequence Length = 144091 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 66 ctcctcctcccgctcctcctcg 87 |||||||||||||||||||||| Sbjct: 122126 ctcctcctcccgctcctcctcg 122105
>ref|XM_756046.1| Ustilago maydis 521 hypothetical protein (UM04992.1) partial mRNA Length = 552 Score = 44.1 bits (22), Expect = 0.50 Identities = 28/30 (93%) Strand = Plus / Plus Query: 58 ccccccacctcctcctcccgctcctcctcg 87 |||||| |||||||||||| |||||||||| Sbjct: 265 cccccctcctcctcctccctctcctcctcg 294
>ref|XM_850331.1| PREDICTED: Canis familiaris similar to Collagen alpha 1(III) chain precursor (LOC612598), mRNA Length = 1590 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 65 cctcctcctcccgctcctcctc 86 |||||||||||||||||||||| Sbjct: 484 cctcctcctcccgctcctcctc 463 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 66 ctcctcctcccgctcctcctc 86 ||||||||||||||||||||| Sbjct: 585 ctcctcctcccgctcctcctc 565 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 66 ctcctcctcccgctcctcctc 86 ||||||||||||||||||||| Sbjct: 453 ctcctcctcccgctcctcctc 433
>gb|AY358837.1| Homo sapiens clone DNA96877 CD99L2 (UNQ1964) mRNA, complete cds Length = 3597 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 66 ctcctcctcccgctcctcctcg 87 |||||||||||||||||||||| Sbjct: 16 ctcctcctcccgctcctcctcg 37
>gb|AC145918.3| Pan troglodytes BAC clone RP43-9J6 from 7, complete sequence Length = 214272 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 65 cctcctcctcccgctcctcctc 86 |||||||||||||||||||||| Sbjct: 164591 cctcctcctcccgctcctcctc 164570
>emb|AL592301.14| Human DNA sequence from clone RP11-413M3 on chromosome 9 Contains the 3' end of the gene for activator of G-protein signalling 3 (AGS3), two novel genes, the CARD9 gene for caspase recruitment domain family member 9, the SNAPC4 gene for a 190kDa small nuclear RNA activating complex polypeptide 4, the SDCCAG3 gene for serologically defined colon cancer antigen 3, the INPP5E gene for a 72kDa inositol polyphosphate-5-phosphatase, the gene for phosphatidylinositol polyphosphate 5-phosphatase type IV (PPI5PIV), a novel gene (KIAA0310), the 3' end of the NOTCH1 gene for Notch homolog 1 translocation-associated (Drosophila) and twenty CpG islands, complete sequence Length = 188462 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Plus Query: 61 cccacctcctcctcccgctcctcctc 86 |||||||||||||||| ||||||||| Sbjct: 163697 cccacctcctcctccccctcctcctc 163722
>gb|BC030536.1| Homo sapiens CD99 molecule-like 2, transcript variant 1, mRNA (cDNA clone MGC:40250 IMAGE:5242536), complete cds Length = 3572 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 66 ctcctcctcccgctcctcctcg 87 |||||||||||||||||||||| Sbjct: 3 ctcctcctcccgctcctcctcg 24
>gb|AC090122.26| Mus musculus strain C57BL/6J clone rp23-28a7 map 7, complete sequence Length = 212485 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 65 cctcctcctcccgctcctcctc 86 |||||||||||||||||||||| Sbjct: 174779 cctcctcctcccgctcctcctc 174800
>emb|AL355386.9| Human DNA sequence from clone RP5-1090M5 on chromosome 1p34.1-34.3 Contains the 5' end of the GRIK3 gene for glutamate receptor ionotropic kainate 3 and a CpG island, complete sequence Length = 133240 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 65 cctcctcctcccgctcctcctc 86 |||||||||||||||||||||| Sbjct: 108100 cctcctcctcccgctcctcctc 108121
>emb|Z49091.1|SPACT1MR S.oleracea act1 mRNA for glycerol-3-phosphate acyltransferase Length = 2411 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 231 tccgtcctcgtcttcttcgacg 252 |||||||||||||||||||||| Sbjct: 268 tccgtcctcgtcttcttcgacg 289
>emb|Y08638.1|GGTFAC G.gallus mRNA for nuclear orphan receptor ROR-beta Length = 2032 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 86 cgcggcggctgccgcctccgcc 107 |||||||||||||||||||||| Sbjct: 221 cgcggcggctgccgcctccgcc 242
>emb|X77370.1|SOGAT S.oleracea GAT mRNA for glycerol-3-phosphate O-acyltransferase Length = 1656 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 231 tccgtcctcgtcttcttcgacg 252 |||||||||||||||||||||| Sbjct: 255 tccgtcctcgtcttcttcgacg 276
>ref|NM_031462.2| Homo sapiens CD99 molecule-like 2 (CD99L2), transcript variant 1, mRNA Length = 3635 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 66 ctcctcctcccgctcctcctcg 87 |||||||||||||||||||||| Sbjct: 33 ctcctcctcccgctcctcctcg 54
>ref|NM_134446.2| Homo sapiens CD99 molecule-like 2 (CD99L2), transcript variant 2, mRNA Length = 3488 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 66 ctcctcctcccgctcctcctcg 87 |||||||||||||||||||||| Sbjct: 33 ctcctcctcccgctcctcctcg 54
>ref|NM_134445.2| Homo sapiens CD99 molecule-like 2 (CD99L2), transcript variant 3, mRNA Length = 3419 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 66 ctcctcctcccgctcctcctcg 87 |||||||||||||||||||||| Sbjct: 33 ctcctcctcccgctcctcctcg 54
>ref|NM_205093.1| Gallus gallus RAR-related orphan receptor B (RORB), mRNA Length = 2032 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 86 cgcggcggctgccgcctccgcc 107 |||||||||||||||||||||| Sbjct: 221 cgcggcggctgccgcctccgcc 242
>emb|AL136580.1|HSM801554 Homo sapiens mRNA; cDNA DKFZp761H2024 (from clone DKFZp761H2024) Length = 3651 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 66 ctcctcctcccgctcctcctcg 87 |||||||||||||||||||||| Sbjct: 33 ctcctcctcccgctcctcctcg 54
>dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete genome Length = 2696255 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Plus Query: 287 cccccagctccgccgcgagttcgcgc 312 |||||||||| ||||||||||||||| Sbjct: 1650385 cccccagctcagccgcgagttcgcgc 1650410
>gb|AC069307.7| Homo sapiens BAC clone RP11-738E22 from 4, complete sequence Length = 203474 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 54 atctccccccacctcctcctcc 75 |||||||||||||||||||||| Sbjct: 150177 atctccccccacctcctcctcc 150156
>gb|AC093530.2| Homo sapiens chromosome 5 clone RP11-401N6, complete sequence Length = 115015 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 65 cctcctcctcccgctcctcctc 86 |||||||||||||||||||||| Sbjct: 107225 cctcctcctcccgctcctcctc 107204
>gb|DP000042.1| Lemur catta target 106 genomic scaffold Length = 452647 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Plus Query: 61 cccacctcctcctcccgctcctcctc 86 ||||||||||| |||||||||||||| Sbjct: 97087 cccacctcctcttcccgctcctcctc 97112
>gb|AC099554.2| Homo sapiens chromosome 5 clone RP11-61G23, complete sequence Length = 164920 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 65 cctcctcctcccgctcctcctc 86 |||||||||||||||||||||| Sbjct: 147780 cctcctcctcccgctcctcctc 147801
>dbj|AP004233.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0065J17 Length = 139014 Score = 44.1 bits (22), Expect = 0.50 Identities = 28/30 (93%) Strand = Plus / Plus Query: 55 tctccccccacctcctcctcccgctcctcc 84 ||||||||| |||||||||||| ||||||| Sbjct: 62019 tctcccccctcctcctcctccccctcctcc 62048
>dbj|AP003228.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0020E09 Length = 149195 Score = 44.1 bits (22), Expect = 0.50 Identities = 28/30 (93%) Strand = Plus / Minus Query: 59 cccccacctcctcctcccgctcctcctcgc 88 ||||||||||||||||| ||||||||||| Sbjct: 119095 cccccacctcctcctcctcctcctcctcgc 119066
>dbj|AP007260.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, fosmid clone: OSJNOa275J08 Length = 36356 Score = 44.1 bits (22), Expect = 0.50 Identities = 28/30 (93%) Strand = Plus / Minus Query: 59 cccccacctcctcctcccgctcctcctcgc 88 ||||||||||||||||| ||||||||||| Sbjct: 5715 cccccacctcctcctcctcctcctcctcgc 5686
>gb|AF274573.4| Homo sapiens chromosome X clone RP11-316K19, RP11-316M19, RP4-687A5 map q28, complete sequence Length = 189436 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 66 ctcctcctcccgctcctcctcg 87 |||||||||||||||||||||| Sbjct: 143083 ctcctcctcccgctcctcctcg 143062
>gb|AC090652.32| Mus musculus strain C57BL/6J chromosome 7 clone rp23-116a10, complete sequence Length = 228147 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 65 cctcctcctcccgctcctcctc 86 |||||||||||||||||||||| Sbjct: 215547 cctcctcctcccgctcctcctc 215526
>gb|AC153611.12| Mus musculus 6 BAC RP23-110P14 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 174538 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 53 gatctccccccacctcctcctc 74 |||||||||||||||||||||| Sbjct: 43298 gatctccccccacctcctcctc 43319
>gb|AY108427.1| Zea mays PCO132322 mRNA sequence Length = 860 Score = 44.1 bits (22), Expect = 0.50 Identities = 31/34 (91%) Strand = Plus / Plus Query: 538 gcaccggcctcgaggtcggccccatcgtccgccc 571 |||| |||||||||||||| |||||||| ||||| Sbjct: 1 gcacgggcctcgaggtcgggcccatcgtacgccc 34
>emb|Z35481.1|CCOCP2 C.cobaya (NIH) ocp-2 mRNA Length = 1281 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 65 cctcctcctcccgctcctcctc 86 |||||||||||||||||||||| Sbjct: 38 cctcctcctcccgctcctcctc 59
>emb|AL355096.4|CNS05TCF Human chromosome 14 DNA sequence BAC R-168L7 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 189389 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 275 cgacctccacctcccccagctc 296 |||||||||||||||||||||| Sbjct: 111903 cgacctccacctcccccagctc 111882
>dbj|AB032202.1| Mus musculus Prss19 gene for neuropsin, complete cds Length = 7401 Score = 44.1 bits (22), Expect = 0.50 Identities = 28/30 (93%) Strand = Plus / Plus Query: 57 tccccccacctcctcctcccgctcctcctc 86 ||||||||||||||||||| ||||||||| Sbjct: 5078 tccccccacctcctcctcctcctcctcctc 5107
>emb|AL683884.26| Mouse DNA sequence from clone RP23-117B19 on chromosome 4, complete sequence Length = 227816 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 65 cctcctcctcccgctcctcctc 86 |||||||||||||||||||||| Sbjct: 164177 cctcctcctcccgctcctcctc 164156
>emb|AL935068.5|CNS08CCK Oryza sativa chromosome 12, . Partial sequence from BAC OSJNBb0088J13 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 116974 Score = 44.1 bits (22), Expect = 0.50 Identities = 28/30 (93%) Strand = Plus / Plus Query: 65 cctcctcctcccgctcctcctcgcggcggc 94 ||||||||||| ||||||||||||||||| Sbjct: 37016 cctcctcctcctcctcctcctcgcggcggc 37045
>emb|AL591884.11| Mouse DNA sequence from clone RP23-183N8 on chromosome 2, complete sequence Length = 204495 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 65 cctcctcctcccgctcctcctc 86 |||||||||||||||||||||| Sbjct: 151760 cctcctcctcccgctcctcctc 151781 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 59 cccccacctcctcctcccgctcctcctc 86 ||||| |||||||||||| ||||||||| Sbjct: 151703 ccccctcctcctcctccccctcctcctc 151730 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 59 cccccacctcctcctcccgctcctcctc 86 ||||| |||||||||||| ||||||||| Sbjct: 151688 ccccctcctcctcctccccctcctcctc 151715 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 59 cccccacctcctcctcccgctcctcctc 86 ||||| |||||||||||| ||||||||| Sbjct: 151673 ccccctcctcctcctccccctcctcctc 151700
>gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome Length = 2695903 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Minus Query: 287 cccccagctccgccgcgagttcgcgc 312 |||||||||| ||||||||||||||| Sbjct: 2666401 cccccagctcagccgcgagttcgcgc 2666376
>dbj|D29968.1|SYODNAK3 Synechococcus sp. dnaK3 gene for heat shock protein HSP70, complete cds Length = 3463 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Plus Query: 287 cccccagctccgccgcgagttcgcgc 312 |||||||||| ||||||||||||||| Sbjct: 925 cccccagctcagccgcgagttcgcgc 950
>ref|XM_511552.1| PREDICTED: Pan troglodytes similar to FZD2 protein (LOC454731), mRNA Length = 2169 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 80 cctcctcgcggcggctgccgcctcc 104 ||||||||| ||||||||||||||| Sbjct: 521 cctcctcgctgcggctgccgcctcc 497
>ref|XM_493808.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 279 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 96 gccgcctccgccttcgccggcgcca 120 ||||||||||||||||||| ||||| Sbjct: 243 gccgcctccgccttcgccgccgcca 219
>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome Length = 3997420 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 152 ctcccgctccccctcgggggt 172 ||||||||||||||||||||| Sbjct: 3137158 ctcccgctccccctcgggggt 3137178
>ref|XM_480436.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3078 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 56 ctccccccacctcctcctcccgctcctcc 84 |||||||| ||||||||||| |||||||| Sbjct: 249 ctcccccctcctcctcctcctgctcctcc 221
>ref|XM_479686.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2076 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 489 tcccacttctcccgcctcgcc 509 ||||||||||||||||||||| Sbjct: 634 tcccacttctcccgcctcgcc 654
>ref|XM_507085.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1300_E01.9 mRNA Length = 2152 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 489 tcccacttctcccgcctcgcc 509 ||||||||||||||||||||| Sbjct: 651 tcccacttctcccgcctcgcc 671
>ref|XM_450843.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1053 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 55 tctccccccacctcctcctcc 75 ||||||||||||||||||||| Sbjct: 31 tctccccccacctcctcctcc 51
>ref|XM_506665.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBa0048A13.16 mRNA Length = 1139 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 55 tctccccccacctcctcctcc 75 ||||||||||||||||||||| Sbjct: 44 tctccccccacctcctcctcc 64
>ref|NM_192459.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 825 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 144 tccctccgctcccgctccccc 164 ||||||||||||||||||||| Sbjct: 174 tccctccgctcccgctccccc 194
>ref|NM_192788.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1842 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 70 tcctcccgctcctcctcgcggcggc 94 |||||||||||||||||||| |||| Sbjct: 1313 tcctcccgctcctcctcgcgtcggc 1337
>ref|NM_193507.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 648 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 77 gctcctcctcgcggcggctgccgcc 101 |||||||||||| |||||||||||| Sbjct: 18 gctcctcctcgccgcggctgccgcc 42
>ref|XM_478332.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1080 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 59 cccccacctcctcctcccgct 79 ||||||||||||||||||||| Sbjct: 53 cccccacctcctcctcccgct 33
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 65 cctcctcctcccgctcctcctcgcg 89 |||||||||| |||||||||||||| Sbjct: 1740824 cctcctcctcgcgctcctcctcgcg 1740848
>gb|AC161235.6| Mus musculus chromosome 3, clone RP24-86C19, complete sequence Length = 206729 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 58 ccccccacctcctcctcccgctcctcctc 86 |||||||||||||||||| ||||||||| Sbjct: 157659 ccccccacctcctcctcctcctcctcctc 157631
>gb|AC130730.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0681D04, complete sequence Length = 163670 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 68 cctcctcccgctcctcctcgcggcg 92 ||||||||||||||||| ||||||| Sbjct: 138969 cctcctcccgctcctccgcgcggcg 138945
>gb|AC108223.5| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0019A16, complete sequence Length = 175425 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Minus Query: 61 cccacctcctcctcccgctcctcctcgcggcgg 93 ||||||||||| | |||||||||||||||||| Sbjct: 148025 cccacctcctcgacgcgctcctcctcgcggcgg 147993
>ref|XM_960018.1| Neurospora crassa OR74A hypothetical protein (NCU02726.1) partial mRNA Length = 1371 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 506 cgccgattccatggtcgagttcgtg 530 ||||||||||| ||||||||||||| Sbjct: 189 cgccgattccaaggtcgagttcgtg 213
>ref|XM_331924.1| Neurospora crassa OR74A hypothetical protein (NCU02726.1) partial mRNA Length = 1371 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 506 cgccgattccatggtcgagttcgtg 530 ||||||||||| ||||||||||||| Sbjct: 189 cgccgattccaaggtcgagttcgtg 213
>ref|NM_005221.5| Homo sapiens distal-less homeobox 5 (DLX5), mRNA Length = 1424 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 78 ctcctcctcgcggcggctgccgcctccgccttc 110 ||||||||||| ||||| ||||||||| ||||| Sbjct: 43 ctcctcctcgccgcggccgccgcctcctccttc 75
>gb|AC132486.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0473H02, complete sequence Length = 141027 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 68 cctcctcccgctcctcctcgcggcg 92 ||||||||||||||||| ||||||| Sbjct: 37379 cctcctcccgctcctccgcgcggcg 37355
>ref|NM_001466.2| Homo sapiens frizzled homolog 2 (Drosophila) (FZD2), mRNA Length = 1983 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 80 cctcctcgcggcggctgccgcctcc 104 ||||||||| ||||||||||||||| Sbjct: 50 cctcctcgctgcggctgccgcctcc 26
>gb|AC164880.3| Mus musculus BAC clone RP23-321G17 from chromosome 7, complete sequence Length = 210387 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 62 ccacctcctcctcccgctcctcctc 86 |||||||||||||| |||||||||| Sbjct: 166814 ccacctcctcctcctgctcctcctc 166790
>gb|AC103703.5| Homo sapiens chromosome 17, clone RP11-764D10, complete sequence Length = 144240 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 80 cctcctcgcggcggctgccgcctcc 104 ||||||||| ||||||||||||||| Sbjct: 32465 cctcctcgctgcggctgccgcctcc 32489
>gb|AY523351.1| Drosophila simulans strain CS8 genomic sequence Length = 956 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 68 cctcctcccgctcctcctcgcggcg 92 |||||| |||||||||||||||||| Sbjct: 162 cctccttccgctcctcctcgcggcg 186
>gb|AY523350.1| Drosophila simulans strain CS7 genomic sequence Length = 956 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 68 cctcctcccgctcctcctcgcggcg 92 |||||| |||||||||||||||||| Sbjct: 162 cctccttccgctcctcctcgcggcg 186
>gb|AY523349.1| Drosophila simulans strain CS6 genomic sequence Length = 956 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 68 cctcctcccgctcctcctcgcggcg 92 |||||| |||||||||||||||||| Sbjct: 162 cctccttccgctcctcctcgcggcg 186
>gb|AY523348.1| Drosophila simulans strain CS5 genomic sequence Length = 956 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 68 cctcctcccgctcctcctcgcggcg 92 |||||| |||||||||||||||||| Sbjct: 162 cctccttccgctcctcctcgcggcg 186
>gb|AY523347.1| Drosophila simulans strain CS4 genomic sequence Length = 956 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 68 cctcctcccgctcctcctcgcggcg 92 |||||| |||||||||||||||||| Sbjct: 162 cctccttccgctcctcctcgcggcg 186
>gb|AY523346.1| Drosophila simulans strain CS3 genomic sequence Length = 956 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 68 cctcctcccgctcctcctcgcggcg 92 |||||| |||||||||||||||||| Sbjct: 162 cctccttccgctcctcctcgcggcg 186
>gb|AY523345.1| Drosophila simulans strain CS2 genomic sequence Length = 956 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 68 cctcctcccgctcctcctcgcggcg 92 |||||| |||||||||||||||||| Sbjct: 162 cctccttccgctcctcctcgcggcg 186
>gb|AY523344.1| Drosophila simulans strain CS1 genomic sequence Length = 956 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 68 cctcctcccgctcctcctcgcggcg 92 |||||| |||||||||||||||||| Sbjct: 162 cctccttccgctcctcctcgcggcg 186
>gb|AC004774.1| Homo sapiens BAC clone CTA-300E22 from 7, complete sequence Length = 161652 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Minus Query: 78 ctcctcctcgcggcggctgccgcctccgccttc 110 ||||||||||| ||||| ||||||||| ||||| Sbjct: 130682 ctcctcctcgccgcggccgccgcctcctccttc 130650
>gb|AC118206.11| Mus musculus chromosome 3, clone RP24-159J16, complete sequence Length = 255036 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 58 ccccccacctcctcctcccgctcctcctc 86 |||||| |||||||||||| ||||||||| Sbjct: 45082 cccccctcctcctcctccccctcctcctc 45054
>gb|AC134832.5| Mus musculus BAC clone RP24-561D12 from chromosome 7, complete sequence Length = 158123 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 67 tcctcctcccgctcctcctcg 87 ||||||||||||||||||||| Sbjct: 59669 tcctcctcccgctcctcctcg 59689
>gb|AC122015.3| Mus musculus BAC clone RP24-358M18 from chromosome 6, complete sequence Length = 166966 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 66 ctcctcctcccgctcctcctc 86 ||||||||||||||||||||| Sbjct: 79007 ctcctcctcccgctcctcctc 78987
>gb|AC122184.4| Mus musculus BAC clone RP23-16C12 from chromosome 7, complete sequence Length = 222122 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 58 ccccccacctcctcctcccgctcctcctc 86 |||||| |||||||||||| ||||||||| Sbjct: 17925 cccccctcctcctcctccccctcctcctc 17897
>gb|AC136515.3| Mus musculus BAC clone RP23-212G1 from chromosome 7, complete sequence Length = 208084 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 58 ccccccacctcctcctcccgctcctcctc 86 |||||| |||||||||||| ||||||||| Sbjct: 73014 ccccccccctcctcctccccctcctcctc 72986
>gb|AC122816.4| Mus musculus BAC clone RP23-235N10 from chromosome 6, complete sequence Length = 177967 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 62 ccacctcctcctcccgctcctcctc 86 ||||||||||||||| ||||||||| Sbjct: 156655 ccacctcctcctccccctcctcctc 156631 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 62 ccacctcctcctcccgctcctcctc 86 ||||||||||||||| ||||||||| Sbjct: 156453 ccacctcctcctccccctcctcctc 156429
>gb|AC122855.4| Mus musculus BAC clone RP23-120H20 from chromosome 14, complete sequence Length = 202424 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 65 cctcctcctcccgctcctcct 85 ||||||||||||||||||||| Sbjct: 125302 cctcctcctcccgctcctcct 125322
>gb|AC091152.18| Homo sapiens chromosome 17, clone RP11-1072C15, complete sequence Length = 181835 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 80 cctcctcgcggcggctgccgcctcc 104 ||||||||| ||||||||||||||| Sbjct: 8721 cctcctcgctgcggctgccgcctcc 8697
>ref|XM_810065.1| Trypanosoma cruzi strain CL Brener mucin-associated surface protein (MASP) (Tc00.1047053508293.80) partial mRNA Length = 1044 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 65 cctcctcctcccgctcctcct 85 ||||||||||||||||||||| Sbjct: 574 cctcctcctcccgctcctcct 594
>ref|XM_810696.1| Trypanosoma cruzi strain CL Brener cell division cycle protein 45 (CDC45) (Tc00.1047053506303.20) partial mRNA Length = 2049 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 67 tcctcctcccgctcctcctcg 87 ||||||||||||||||||||| Sbjct: 572 tcctcctcccgctcctcctcg 552
>gb|AC126022.4| Mus musculus BAC clone RP24-405F4 from chromosome 16, complete sequence Length = 173331 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 58 ccccccacctcctcctcccgctcctcctc 86 |||||||||||||||| || ||||||||| Sbjct: 5273 ccccccacctcctccttcccctcctcctc 5245
>gb|AC124369.4| Mus musculus BAC clone RP24-549O12 from chromosome 7, complete sequence Length = 147686 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 56 ctccccccacctcctcctcccgctcctcc 84 |||||||| |||||||||||| ||||||| Sbjct: 135078 ctcccccctcctcctcctccccctcctcc 135050 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 59 cccccacctcctcctcccgctcctcctc 86 ||||| |||||||||||| ||||||||| Sbjct: 135051 ccccctcctcctcctccccctcctcctc 135024
>gb|AC121974.3| Mus musculus BAC clone RP24-285E14 from chromosome 16, complete sequence Length = 159535 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 58 ccccccacctcctcctcccgctcctcctc 86 |||||||||||||||| || ||||||||| Sbjct: 118192 ccccccacctcctccttcccctcctcctc 118164
>ref|XM_814443.1| Trypanosoma cruzi strain CL Brener mucin-associated surface protein (MASP) (Tc00.1047053510625.150) partial mRNA Length = 912 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 65 cctcctcctcccgctcctcct 85 ||||||||||||||||||||| Sbjct: 439 cctcctcctcccgctcctcct 459
>ref|XM_800225.1| Trypanosoma cruzi strain CL Brener mucin-associated surface protein (MASP) (Tc00.1047053510461.30) partial mRNA Length = 651 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 65 cctcctcctcccgctcctcct 85 ||||||||||||||||||||| Sbjct: 574 cctcctcctcccgctcctcct 594
>gb|AC112521.4| Mus musculus BAC clone RP23-186C6 from 9, complete sequence Length = 230334 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 58 ccccccacctcctcctcccgctcctcctc 86 |||||| |||||||||||| ||||||||| Sbjct: 57485 cccccctcctcctcctccccctcctcctc 57513
>gb|BC003747.1| Mus musculus troponin T3, skeletal, fast, mRNA (cDNA clone MGC:5854 IMAGE:3594256), complete cds Length = 1101 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 67 tcctcctcccgctcctcctcg 87 ||||||||||||||||||||| Sbjct: 218 tcctcctcccgctcctcctcg 198
>gb|AC116748.8| Mus musculus chromosome 9, clone RP23-80L8, complete sequence Length = 268886 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 56 ctccccccacctcctcctcccgctcctcc 84 |||||||| |||||||||||| ||||||| Sbjct: 169417 ctcccccctcctcctcctccccctcctcc 169445 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 59 cccccacctcctcctcccgctcctcctc 86 ||||| |||||||||||| ||||||||| Sbjct: 169444 ccccctcctcctcctccccctcctcctc 169471
>gb|AC165968.3| Mus musculus BAC clone RP23-181K4 from chromosome 7, complete sequence Length = 190840 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 58 ccccccacctcctcctcccgctcctcctc 86 |||||| |||||||||||| ||||||||| Sbjct: 144194 cccccctcctcctcctccccctcctcctc 144166
>gb|AC098563.6| Rattus norvegicus 1 BAC CH230-123A15 (Children's Hospital Oakland Research Institute) complete sequence Length = 250414 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 67 tcctcctcccgctcctcctcg 87 ||||||||||||||||||||| Sbjct: 221432 tcctcctcccgctcctcctcg 221452
>gb|AC128353.6| Rattus norvegicus 13 BAC CH230-148A5 (Children's Hospital Oakland Research Institute) complete sequence Length = 207556 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 58 ccccccacctcctcctcccgctcctcctc 86 |||||| |||||||||||| ||||||||| Sbjct: 101074 cccccctcctcctcctccccctcctcctc 101046
>gb|AC099739.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1528D07, complete sequence Length = 87592 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 96 gccgcctccgccttcgccggcgcca 120 ||||||||||||||||||| ||||| Sbjct: 28795 gccgcctccgccttcgccgccgcca 28819
>gb|AC154683.2| Mus musculus BAC clone RP23-142O4 from chromosome 14, complete sequence Length = 219067 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 62 ccacctcctcctcccgctcctcctc 86 ||||||||||||||||| ||||||| Sbjct: 17834 ccacctcctcctcccgcgcctcctc 17810
>gb|AC083984.7| Homo sapiens chromosome 11, clone RP11-401C19, complete sequence Length = 117149 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 66 ctcctcctcccgctcctcctc 86 ||||||||||||||||||||| Sbjct: 23983 ctcctcctcccgctcctcctc 23963
>gb|BC036881.1| Homo sapiens, clone IMAGE:5242858, mRNA Length = 1841 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 80 cctcctcgcggcggctgccgcctcc 104 ||||||||| ||||||||||||||| Sbjct: 1793 cctcctcgctgcggctgccgcctcc 1817
>gb|BC074568.1| Xenopus tropicalis MGC69517 protein, mRNA (cDNA clone MGC:69517 IMAGE:5336497), complete cds Length = 1842 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 62 ccacctcctcctcccgctcctcctc 86 |||||||||||||| |||||||||| Sbjct: 1257 ccacctcctcctcctgctcctcctc 1233
>emb|CR627201.1| Homo sapiens mRNA; cDNA DKFZp781K171 (from clone DKFZp781K171) Length = 3153 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 55 tctccccccacctcctcctcc 75 ||||||||||||||||||||| Sbjct: 112 tctccccccacctcctcctcc 132
>dbj|AK127778.1| Homo sapiens cDNA FLJ45879 fis, clone OCBBF3019269, highly similar to Homo sapiens Dvl-binding protein IDAX (inhibition of the Dvl and Axin complex) (IDAX) Length = 5272 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 55 tctccccccacctcctcctcc 75 ||||||||||||||||||||| Sbjct: 105 tctccccccacctcctcctcc 125
>tpg|BK000731.1| TPA: TPA_inf: Oryza sativa transposon Rim2-M117, complete sequence Length = 997 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Minus Query: 52 cgatctccccccacctcctcctcccgctcctcc 84 ||||||||| || |||||||||||| ||||||| Sbjct: 541 cgatctccctcctcctcctcctccccctcctcc 509
>dbj|AK023493.1| Homo sapiens cDNA FLJ13431 fis, clone PLACE1002532, highly similar to HOMEOBOX PROTEIN DLX-5 Length = 1415 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 78 ctcctcctcgcggcggctgccgcctccgccttc 110 ||||||||||| ||||| ||||||||| ||||| Sbjct: 43 ctcctcctcgccgcggccgccgcctcctccttc 75
>gb|L49471.1|MUSFE4E17 Mus musculus troponin T fast skeletal muscle isoform FA4e17 (Tnnt3) mRNA, complete cds Length = 1049 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 67 tcctcctcccgctcctcctcg 87 ||||||||||||||||||||| Sbjct: 192 tcctcctcccgctcctcctcg 172
>gb|L49466.1|MUSFE2E17 Mus musculus troponin T fast skeletal muscle isoform FE2e17 (Tnnt3) mRNA, complete cds Length = 1067 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 67 tcctcctcccgctcctcctcg 87 ||||||||||||||||||||| Sbjct: 210 tcctcctcccgctcctcctcg 190
>gb|M15202.1|RATTNT Rattus norvegicus troponin T class proteins, alternatively spliced products, complete cds Length = 17249 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 67 tcctcctcccgctcctcctcg 87 ||||||||||||||||||||| Sbjct: 9173 tcctcctcccgctcctcctcg 9153
>gb|AC015988.10| Homo sapiens, clone RP11-153F20, complete sequence Length = 150113 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 62 ccacctcctcctcccgctcctcctc 86 ||||||||||||||| ||||||||| Sbjct: 38613 ccacctcctcctccccctcctcctc 38589
>gb|AC092041.2| Homo sapiens chromosome 3 clone RP11-132K4, complete sequence Length = 171461 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 62 ccacctcctcctcccgctcctcctc 86 ||||||||||||||| ||||||||| Sbjct: 49154 ccacctcctcctccccctcctcctc 49178
>gb|AF333761.1|AF333761 Rhodococcus ruber putative two-component system regulatory protein, partial cds; putative integral membrane protein and putative sodium:solute symporter, EthR (ethR), EthA (ethA), EthB (ethB), EthC (ethC), EthD (ethD), complete cds; class II transposon insertion sequence IS3 transposase (tnpX) and transposase TnpA (tnpA) genes, complete cds; putative membrane protein gene, partial cds; and unknown genes Length = 23656 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 224 cccctactccgtcctcgtctt 244 ||||||||||||||||||||| Sbjct: 16980 cccctactccgtcctcgtctt 17000
>gb|L49468.1| Mus musculus troponin T fast skeletal muscle isoform FA3e17 (Tnnt3) mRNA, complete cds Length = 1052 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 67 tcctcctcccgctcctcctcg 87 ||||||||||||||||||||| Sbjct: 195 tcctcctcccgctcctcctcg 175
>gb|L49467.1| Mus musculus troponin T fast skeletal muscle isoform FA1e17 (Tnnt3) mRNA, complete cds Length = 1079 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 67 tcctcctcccgctcctcctcg 87 ||||||||||||||||||||| Sbjct: 222 tcctcctcccgctcctcctcg 202
>gb|L49469.1|MUSFE3ENGV Mus musculus troponin T fast skeletal muscle isoform (Tnnt3) mRNA, partial cds Length = 1011 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 67 tcctcctcccgctcctcctcg 87 ||||||||||||||||||||| Sbjct: 195 tcctcctcccgctcctcctcg 175
>gb|BC052266.1| Homo sapiens frizzled homolog 2 (Drosophila), mRNA (cDNA clone IMAGE:6578442), partial cds Length = 2048 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 80 cctcctcgcggcggctgccgcctcc 104 ||||||||| ||||||||||||||| Sbjct: 148 cctcctcgctgcggctgccgcctcc 124
>gb|AC153579.10| Mus musculus 6 BAC RP23-21F2 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 228481 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 55 tctccccccacctcctcctcc 75 ||||||||||||||||||||| Sbjct: 60148 tctccccccacctcctcctcc 60128
>gb|AE016818.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome V, complete sequence Length = 1519138 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 62 ccacctcctcctcccgctcctcctc 86 |||||||||| |||||||||||||| Sbjct: 258123 ccacctcctcttcccgctcctcctc 258099
>gb|AC151989.4| Mus musculus BAC clone RP23-298C3 from chromosome 7, complete sequence Length = 217239 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 57 tccccccacctcctcctcccgctcctcct 85 ||||||||||||||||||| |||||||| Sbjct: 16614 tccccccacctcctcctcctcctcctcct 16586
>gb|AC140372.3| Mus musculus BAC clone RP23-185B17 from chromosome 3, complete sequence Length = 180084 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 58 ccccccacctcctcctcccgctcctcctc 86 |||||| |||||||||||| ||||||||| Sbjct: 100929 cccccctcctcctcctccccctcctcctc 100901
>gb|S68786.1| troponin T {alternatively spliced, exon y} [rats, Wistar, neonatal hind-leg fast skeletal muscle, Genomic, 81 nt] Length = 81 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 67 tcctcctcccgctcctcctcg 87 ||||||||||||||||||||| Sbjct: 64 tcctcctcccgctcctcctcg 44
>gb|AC144426.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJA1015F07, complete sequence Length = 127098 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 96 gccgcctccgccttcgccggcgcca 120 ||||||||||||||||||| ||||| Sbjct: 100910 gccgcctccgccttcgccgccgcca 100934
>dbj|AK051032.1| Mus musculus 9 days embryo whole body cDNA, RIKEN full-length enriched library, clone:D030057J08 product:Zic family member 2 (odd-paired homolog, Drosophila), full insert sequence Length = 2617 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 62 ccacctcctcctcccgctcctcctc 86 ||||||||||||||||| ||||||| Sbjct: 40 ccacctcctcctcccgcgcctcctc 64
>emb|CR377979.1| Pinus pinaster SSR, clone PPB3E09 Length = 624 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 62 ccacctcctcctcccgctcctcctc 86 ||||||||||||||| ||||||||| Sbjct: 369 ccacctcctcctccccctcctcctc 393
>gb|AF317727.1|AF317727 Mus musculus killer cell lectin-like receptor G1 (Klrg1) gene, complete cds Length = 13297 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 55 tctccccccacctcctcctcc 75 ||||||||||||||||||||| Sbjct: 11240 tctccccccacctcctcctcc 11260
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Minus Query: 52 cgatctccccccacctcctcctcccgctcctcc 84 ||||||||| || |||||||||||| ||||||| Sbjct: 19656939 cgatctccctcctcctcctcctccccctcctcc 19656907 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 65 cctcctcctcccgctcctcctcgc 88 |||||||||||| ||||||||||| Sbjct: 35113545 cctcctcctccccctcctcctcgc 35113522 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 65 cctcctcctcccgctcctcctcgc 88 ||||||||||||||| |||||||| Sbjct: 19325019 cctcctcctcccgctgctcctcgc 19324996 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 ctgccgcctccgccttcgcc 113 |||||||||||||||||||| Sbjct: 16916318 ctgccgcctccgccttcgcc 16916299 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 233 cgtcctcgtcttcttcgacg 252 |||||||||||||||||||| Sbjct: 10755229 cgtcctcgtcttcttcgacg 10755210 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 ctgccgcctccgccttcgcc 113 |||||||||||||||||||| Sbjct: 6320351 ctgccgcctccgccttcgcc 6320332 Score = 40.1 bits (20), Expect = 7.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 75 ccgctcctcctcgcggcggctgccgcctccgc 106 |||||||||| ||||| |||||||||||||| Sbjct: 1295258 ccgctcctccgagcggctgctgccgcctccgc 1295289
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Minus Query: 61 cccacctcctcctcccgctcctcctcgcggcgg 93 ||||||||||| | |||||||||||||||||| Sbjct: 19279237 cccacctcctcgacgcgctcctcctcgcggcgg 19279205 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 ctgccgcctccgccttcgcc 113 |||||||||||||||||||| Sbjct: 16770784 ctgccgcctccgccttcgcc 16770803 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 ctgccgcctccgccttcgcc 113 |||||||||||||||||||| Sbjct: 11144481 ctgccgcctccgccttcgcc 11144462
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 55 tctccccccacctcctcctcc 75 ||||||||||||||||||||| Sbjct: 13127622 tctccccccacctcctcctcc 13127642 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 233 cgtcctcgtcttcttcgacg 252 |||||||||||||||||||| Sbjct: 14782286 cgtcctcgtcttcttcgacg 14782305 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 62 ccacctcctcctcccgctcctcctcgcg 89 |||||||||||||| |||||||| |||| Sbjct: 13539775 ccacctcctcctccggctcctccacgcg 13539748 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 ctgccgcctccgccttcgcc 113 |||||||||||||||||||| Sbjct: 8979738 ctgccgcctccgccttcgcc 8979719 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 ctgccgcctccgccttcgcc 113 |||||||||||||||||||| Sbjct: 2823290 ctgccgcctccgccttcgcc 2823271
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 56 ctccccccacctcctcctcccgctcctcc 84 |||||||| ||||||||||| |||||||| Sbjct: 5121532 ctcccccctcctcctcctcctgctcctcc 5121560 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 489 tcccacttctcccgcctcgcc 509 ||||||||||||||||||||| Sbjct: 274351 tcccacttctcccgcctcgcc 274331 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 68 cctcctcccgctcctcctcg 87 |||||||||||||||||||| Sbjct: 24709088 cctcctcccgctcctcctcg 24709107 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 233 cgtcctcgtcttcttcgacg 252 |||||||||||||||||||| Sbjct: 13352629 cgtcctcgtcttcttcgacg 13352610 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 ctgccgcctccgccttcgcc 113 |||||||||||||||||||| Sbjct: 9868686 ctgccgcctccgccttcgcc 9868705
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 59 cccccacctcctcctcccgct 79 ||||||||||||||||||||| Sbjct: 19309078 cccccacctcctcctcccgct 19309058 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 ctgccgcctccgccttcgcc 113 |||||||||||||||||||| Sbjct: 7601397 ctgccgcctccgccttcgcc 7601416
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 68 cctcctcccgctcctcctcgcggcg 92 ||||||||||||||||| ||||||| Sbjct: 5715005 cctcctcccgctcctccgcgcggcg 5714981 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 96 gccgcctccgccttcgccggcgcc 119 ||||||||||||||||||| |||| Sbjct: 28553591 gccgcctccgccttcgccgccgcc 28553568 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 ctgccgcctccgccttcgcc 113 |||||||||||||||||||| Sbjct: 8226842 ctgccgcctccgccttcgcc 8226823 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 61 cccacctcctcctcccgctcctcc 84 ||||||||||||||| |||||||| Sbjct: 6773803 cccacctcctcctccggctcctcc 6773826 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 ctccccccacctcctcctcc 75 |||||||||||||||||||| Sbjct: 1583266 ctccccccacctcctcctcc 1583285
>gb|AC093628.3| Homo sapiens BAC clone RP11-98N20 from 4, complete sequence Length = 159991 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 55 tctccccccacctcctcctcc 75 ||||||||||||||||||||| Sbjct: 47111 tctccccccacctcctcctcc 47091
>ref|NM_001004806.1| Xenopus tropicalis MGC69517 protein (MGC69517), mRNA Length = 1842 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 62 ccacctcctcctcccgctcctcctc 86 |||||||||||||| |||||||||| Sbjct: 1257 ccacctcctcctcctgctcctcctc 1233
>gb|AC121344.5| Homo sapiens X BAC RP11-408N23 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 111500 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 20 ctccccagatctacatccacc 40 ||||||||||||||||||||| Sbjct: 49165 ctccccagatctacatccacc 49185
>dbj|AP003924.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1064G04 Length = 186704 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 77 gctcctcctcgcggcggctgccgcc 101 |||||||||||| |||||||||||| Sbjct: 167408 gctcctcctcgccgcggctgccgcc 167384
>gb|AC120508.3| Oryza sativa chromosome 3 BAC OSJNBb0021O11 genomic sequence, complete sequence Length = 123406 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 58 ccccccacctcctcctcccgctcctcctc 86 |||||||||||||||||| ||||||||| Sbjct: 29705 ccccccacctcctcctcctcctcctcctc 29677
>gb|AC132145.3| Mus musculus BAC clone RP23-44H21 from chromosome 7, complete sequence Length = 162513 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 56 ctccccccacctcctcctcccgctcctcc 84 |||||||| |||||||||||| ||||||| Sbjct: 15051 ctcccccctcctcctcctccccctcctcc 15023 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 59 cccccacctcctcctcccgctcctcctc 86 ||||| |||||||||||| ||||||||| Sbjct: 15024 ccccctcctcctcctccccctcctcctc 14997
>dbj|AP003291.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0684E06 Length = 147004 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 144 tccctccgctcccgctccccc 164 ||||||||||||||||||||| Sbjct: 48487 tccctccgctcccgctccccc 48467
>dbj|AP002866.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0410E01 Length = 166753 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 70 tcctcccgctcctcctcgcggcggc 94 |||||||||||||||||||| |||| Sbjct: 151013 tcctcccgctcctcctcgcgtcggc 150989
>dbj|AP005728.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0048A13 Length = 137680 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 55 tctccccccacctcctcctcc 75 ||||||||||||||||||||| Sbjct: 49712 tctccccccacctcctcctcc 49732
>dbj|AP003909.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1300_E01 Length = 103022 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 489 tcccacttctcccgcctcgcc 509 ||||||||||||||||||||| Sbjct: 40777 tcccacttctcccgcctcgcc 40757
>dbj|AP004656.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0020B10 Length = 136175 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 56 ctccccccacctcctcctcccgctcctcc 84 |||||||| ||||||||||| |||||||| Sbjct: 71296 ctcccccctcctcctcctcctgctcctcc 71324
>ref|XM_320264.2| Anopheles gambiae str. PEST ENSANGP00000016515 (ENSANGG00000014026), partial mRNA Length = 1551 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 62 ccacctcctcctcccgctcct 82 ||||||||||||||||||||| Sbjct: 457 ccacctcctcctcccgctcct 437
>dbj|AK102487.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033094M21, full insert sequence Length = 1544 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 68 cctcctcccgctcctcctcgcggcg 92 ||||||||||||||||| ||||||| Sbjct: 238 cctcctcccgctcctccgcgcggcg 262
>dbj|AK099689.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013073B17, full insert sequence Length = 3320 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 56 ctccccccacctcctcctcccgctcctcc 84 |||||||| ||||||||||| |||||||| Sbjct: 249 ctcccccctcctcctcctcctgctcctcc 221
>dbj|AK099307.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023141K03, full insert sequence Length = 1053 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 55 tctccccccacctcctcctcc 75 ||||||||||||||||||||| Sbjct: 31 tctccccccacctcctcctcc 51
>dbj|AK099227.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013091I23, full insert sequence Length = 2076 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 489 tcccacttctcccgcctcgcc 509 ||||||||||||||||||||| Sbjct: 634 tcccacttctcccgcctcgcc 654
>gb|AC154461.2| Mus musculus BAC clone RP24-163I13 from 14, complete sequence Length = 202273 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 65 cctcctcctcccgctcctcct 85 ||||||||||||||||||||| Sbjct: 101070 cctcctcctcccgctcctcct 101090
>dbj|AK073895.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033074N24, full insert sequence Length = 1202 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 96 gccgcctccgccttcgccggcgcca 120 ||||||||||||||||||| ||||| Sbjct: 14 gccgcctccgccttcgccgccgcca 38
>ref|NM_210013.1| Eremothecium gossypii AEL201Wp (AEL201W), mRNA Length = 1725 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 62 ccacctcctcctcccgctcctcctc 86 |||||||||| |||||||||||||| Sbjct: 184 ccacctcctcttcccgctcctcctc 160
>dbj|AK069415.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023019E02, full insert sequence Length = 2152 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 489 tcccacttctcccgcctcgcc 509 ||||||||||||||||||||| Sbjct: 651 tcccacttctcccgcctcgcc 671
>gb|AC144798.4| Mus musculus BAC clone RP24-364A24 from 14, complete sequence Length = 159766 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 62 ccacctcctcctcccgctcctcctc 86 ||||||||||||||||| ||||||| Sbjct: 80205 ccacctcctcctcccgcgcctcctc 80181
>dbj|AK064072.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-125-G12, full insert sequence Length = 1139 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 55 tctccccccacctcctcctcc 75 ||||||||||||||||||||| Sbjct: 44 tctccccccacctcctcctcc 64
>dbj|AP003815.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1163_G04 Length = 106253 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 59 cccccacctcctcctcccgct 79 ||||||||||||||||||||| Sbjct: 85304 cccccacctcctcctcccgct 85284
>gb|AC006059.3|AC006059 Homo sapiens PAC RPCI4-613B23 (Roswell Park Cancer Institute Human PAC Library) complete sequence Length = 185161 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 62 ccacctcctcctcccgctcctcctc 86 ||||||||||||||| ||||||||| Sbjct: 65703 ccacctcctcctccccctcctcctc 65727
>emb|AL355102.5|CNS05TCL Human chromosome 14 DNA sequence BAC R-404P21 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 201844 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 65 cctcctcctcccgctcctcct 85 ||||||||||||||||||||| Sbjct: 91695 cctcctcctcccgctcctcct 91675
>gb|AC104908.10| Mus musculus chromosome 3, clone RP23-325M18, complete sequence Length = 231792 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 58 ccccccacctcctcctcccgctcctcctc 86 |||||||||||||||||| ||||||||| Sbjct: 182613 ccccccacctcctcctcctcctcctcctc 182641
>gb|BC006226.2| Homo sapiens distal-less homeobox 5, mRNA (cDNA clone MGC:10672 IMAGE:3941691), complete cds Length = 1419 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 78 ctcctcctcgcggcggctgccgcctccgccttc 110 ||||||||||| ||||| ||||||||| ||||| Sbjct: 29 ctcctcctcgccgcggccgccgcctcctccttc 61
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Minus Query: 61 cccacctcctcctcccgctcctcctcgcggcgg 93 ||||||||||| | |||||||||||||||||| Sbjct: 19438786 cccacctcctcgacgcgctcctcctcgcggcgg 19438754 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 ctgccgcctccgccttcgcc 113 |||||||||||||||||||| Sbjct: 16864554 ctgccgcctccgccttcgcc 16864573 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 ctgccgcctccgccttcgcc 113 |||||||||||||||||||| Sbjct: 11223670 ctgccgcctccgccttcgcc 11223651
>emb|AL731591.3|OSJN00240 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0039C07, complete sequence Length = 166410 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Minus Query: 52 cgatctccccccacctcctcctcccgctcctcc 84 ||||||||| || |||||||||||| ||||||| Sbjct: 107665 cgatctccctcctcctcctcctccccctcctcc 107633
>emb|AL731548.13| Mouse DNA sequence from clone RP23-71M18 on chromosome X, complete sequence Length = 218612 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 58 ccccccacctcctcctcccgctcctcctc 86 |||||| |||||||||||| ||||||||| Sbjct: 104394 cccccctcctcctcctccccctcctcctc 104366
>gb|AC122017.5| Mus musculus BAC clone RP24-361J4 from 7, complete sequence Length = 158807 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 58 ccccccacctcctcctcccgctcctcctc 86 ||||| ||||||||||||| ||||||||| Sbjct: 77798 ccccctacctcctcctccccctcctcctc 77826
>gb|AC138721.4| Mus musculus BAC clone RP23-157G22 from 6, complete sequence Length = 187385 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 66 ctcctcctcccgctcctcctc 86 ||||||||||||||||||||| Sbjct: 31561 ctcctcctcccgctcctcctc 31541
>gb|AC147637.3| Mus musculus BAC clone RP23-205M20 from 9, complete sequence Length = 211684 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 58 ccccccacctcctcctcccgctcctcctc 86 |||||| |||||||||||| ||||||||| Sbjct: 142802 cccccctcctcctcctccccctcctcctc 142830
>emb|CR352249.24| Zebrafish DNA sequence from clone DKEY-97O18 in linkage group 7, complete sequence Length = 180142 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 66 ctcctcctcccgctcctcctc 86 ||||||||||||||||||||| Sbjct: 117967 ctcctcctcccgctcctcctc 117987
>gb|L37882.1|HUMFRIZ Human frizzled gene product mRNA, complete cds Length = 1923 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 80 cctcctcgcggcggctgccgcctcc 104 ||||||||| ||||||||||||||| Sbjct: 50 cctcctcgctgcggctgccgcctcc 26
>gb|AC138622.4| Mus musculus BAC clone RP23-100J15 from chromosome 6, complete sequence Length = 194611 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 62 ccacctcctcctcccgctcctcctc 86 |||||||||||||| |||||||||| Sbjct: 9992 ccacctcctcctcctgctcctcctc 10016
>gb|AC013548.13| Mus musculus chromosome 7, clone RP23-209O22, complete sequence Length = 220084 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 67 tcctcctcccgctcctcctcg 87 ||||||||||||||||||||| Sbjct: 207638 tcctcctcccgctcctcctcg 207658
>emb|AL603651.14| Mouse DNA sequence from clone RP23-398J2 on chromosome 7, complete sequence Length = 205942 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 67 tcctcctcccgctcctcctcg 87 ||||||||||||||||||||| Sbjct: 27613 tcctcctcccgctcctcctcg 27633
>dbj|AP003183.2| Mus musculus genomic DNA, chromosome 7 clone:B229F13, complete sequences Length = 101491 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 67 tcctcctcccgctcctcctcg 87 ||||||||||||||||||||| Sbjct: 75867 tcctcctcccgctcctcctcg 75887
>gb|U04980.1|RNU04980 Rattus norvegicus fetal troponin T 3 (fetal TnT3) mRNA, partial cds Length = 162 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 67 tcctcctcccgctcctcctcg 87 ||||||||||||||||||||| Sbjct: 121 tcctcctcccgctcctcctcg 101
>gb|U04979.1|RNU04979 Rattus norvegicus fetal troponin T 2 (fetal TnT2) mRNA, partial cds Length = 177 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 67 tcctcctcccgctcctcctcg 87 ||||||||||||||||||||| Sbjct: 136 tcctcctcccgctcctcctcg 116
>dbj|AP001862.2| Homo sapiens genomic DNA, chromosome 4q22-q24, clone:2060O22, complete sequence Length = 111557 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 55 tctccccccacctcctcctcc 75 ||||||||||||||||||||| Sbjct: 1173 tctccccccacctcctcctcc 1153
>dbj|AP000615.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, clone:P0043E01 Length = 154128 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 96 gccgcctccgccttcgccggcgcca 120 ||||||||||||||||||| ||||| Sbjct: 33812 gccgcctccgccttcgccgccgcca 33836
>gb|AC171406.3| Mus musculus BAC RP24-475O6 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 192548 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 59 cccccacctcctcctcccgctcctcctc 86 ||||| |||||||||||| ||||||||| Sbjct: 121098 ccccctcctcctcctccccctcctcctc 121125
>gb|AC152944.2| Mus musculus 10 BAC RP23-427I4 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 179149 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 59 cccccacctcctcctcccgctcctcctc 86 ||||| |||||||||||| ||||||||| Sbjct: 133278 ccccctcctcctcctccccctcctcctc 133305
>gb|AC099884.12| Mus musculus chromosome 15, clone RP23-11F24, complete sequence Length = 265797 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 55 tctccccccacctcctcctcccgctcct 82 ||||||||| |||||||||||| ||||| Sbjct: 127006 tctccccccccctcctcctccccctcct 127033
>ref|NM_188246.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 954 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 60 ccccacctcctcctcccgctcctcctcg 87 |||||||||||||||| |||||||||| Sbjct: 21 ccccacctcctcctcctcctcctcctcg 48
>ref|XM_529244.1| PREDICTED: Pan troglodytes similar to Wiskott-Aldrich syndrome protein family member 4 (LOC473870), mRNA Length = 885 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 63 cacctcctcctcccgctcctcctc 86 |||||||||||||| ||||||||| Sbjct: 560 cacctcctcctccccctcctcctc 583
>gb|AC132350.4| Mus musculus BAC clone RP24-95A6 from chromosome 6, complete sequence Length = 177167 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 59 cccccacctcctcctcccgctcctcctc 86 ||||| |||||||||||| ||||||||| Sbjct: 9940 ccccctcctcctcctccctctcctcctc 9967
>gb|AC164294.2| Mus musculus BAC clone RP24-556J13 from chromosome 14, complete sequence Length = 143851 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 59 cccccacctcctcctcccgctcctcctc 86 ||||| |||||||||||| ||||||||| Sbjct: 30098 ccccctcctcctcctccccctcctcctc 30125
>ref|XM_474763.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2274 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 ctgccgcctccgccttcgcc 113 |||||||||||||||||||| Sbjct: 2203 ctgccgcctccgccttcgcc 2184
>ref|XM_463796.1| Oryza sativa (japonica cultivar-group), mRNA Length = 711 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 237 ctcgtcttcttcgacgccacctcg 260 |||||||||||| ||||||||||| Sbjct: 118 ctcgtcttcttccacgccacctcg 95
>ref|NM_196358.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBb0058B20.6), mRNA Length = 2745 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 ctgccgcctccgccttcgcc 113 |||||||||||||||||||| Sbjct: 2200 ctgccgcctccgccttcgcc 2181
>ref|NM_196061.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0073L01.22), mRNA Length = 2583 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 ctgccgcctccgccttcgcc 113 |||||||||||||||||||| Sbjct: 2080 ctgccgcctccgccttcgcc 2061
>ref|XM_530749.1| PREDICTED: Pan troglodytes LOC461505 (LOC461505), mRNA Length = 1423 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 65 cctcctcctcccgctcctcc 84 |||||||||||||||||||| Sbjct: 583 cctcctcctcccgctcctcc 564
>ref|XM_471406.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 4188 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 233 cgtcctcgtcttcttcgacg 252 |||||||||||||||||||| Sbjct: 2076 cgtcctcgtcttcttcgacg 2095
>ref|NM_187705.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1401 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 ctgccgcctccgccttcgcc 113 |||||||||||||||||||| Sbjct: 1348 ctgccgcctccgccttcgcc 1329
>gb|AY360386.1| Oryza sativa (japonica cultivar-group) chromosome 8 BAC OSJNBa0017M13, complete sequence Length = 161902 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 233 cgtcctcgtcttcttcgacg 252 |||||||||||||||||||| Sbjct: 77104 cgtcctcgtcttcttcgacg 77085
>gb|AC164075.4| Mus musculus chromosome 7, clone RP24-259P13, complete sequence Length = 159578 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 59 cccccacctcctcctcccgctcctcctc 86 ||||| |||||||||||| ||||||||| Sbjct: 145088 ccccctcctcctcctccccctcctcctc 145061
>gb|AY022921.1| Oryza sativa microsatellite MRG5246 containing (CTC)X8, closest to marker C445, genomic sequence Length = 224 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 65 cctcctcctcccgctcctcctcgc 88 |||||||||||| ||||||||||| Sbjct: 115 cctcctcctccccctcctcctcgc 138
>gb|AC133004.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0046F10, complete sequence Length = 184041 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 ctgccgcctccgccttcgcc 113 |||||||||||||||||||| Sbjct: 33129 ctgccgcctccgccttcgcc 33148
>gb|AC121144.11| Mus musculus chromosome 3, clone RP24-202D19, complete sequence Length = 161989 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 59 cccccacctcctcctcccgctcctcctc 86 ||||| |||||||||||| ||||||||| Sbjct: 97596 ccccctcctcctcctccccctcctcctc 97623
>gb|AC165357.4| Mus musculus BAC clone RP23-114G24 from chromosome 10, complete sequence Length = 216816 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 ctccccccacctcctcctcc 75 |||||||||||||||||||| Sbjct: 196504 ctccccccacctcctcctcc 196485
>gb|AC155164.5| Mus musculus BAC clone RP24-74L7 from chromosome 8, complete sequence Length = 193057 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 59 cccccacctcctcctcccgctcctcctc 86 ||||| |||||||||||| ||||||||| Sbjct: 85229 ccccctcctcctcctccccctcctcctc 85202
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 288 ccccagctccgccgcgagtt 307 |||||||||||||||||||| Sbjct: 1998312 ccccagctccgccgcgagtt 1998331
>gb|AC130598.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0056I11, complete sequence Length = 145796 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 ctccccccacctcctcctcc 75 |||||||||||||||||||| Sbjct: 35426 ctccccccacctcctcctcc 35445
>gb|AC125688.6| Rattus norvegicus 20 BAC CH230-186I2 (Children's Hospital Oakland Research Institute) complete sequence Length = 209618 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 59 cccccacctcctcctcccgctcctcctc 86 ||||| |||||||||||| ||||||||| Sbjct: 72844 ccccctcctcctcctccccctcctcctc 72871
>gb|AC136645.2| Rattus norvegicus 7 BAC CH230-156H17 (Children's Hospital Oakland Research Institute) complete sequence Length = 204000 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 tcctcctcccgctcctcctc 86 |||||||||||||||||||| Sbjct: 129720 tcctcctcccgctcctcctc 129739
>gb|AC112330.5| Rattus norvegicus 15 BAC CH230-185E8 (Children's Hospital Oakland Research Institute) complete sequence Length = 158526 Score = 40.1 bits (20), Expect = 7.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 55 tctccccccacctcctcctcccgctcctcctc 86 |||||| || |||||||||||| ||||||||| Sbjct: 107267 tctccctcctcctcctcctccccctcctcctc 107236
>ref|XM_413946.1| PREDICTED: Gallus gallus similar to RASGRF1 protein (LOC415578), mRNA Length = 4507 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 ctgccgcctccgccttcgcc 113 |||||||||||||||||||| Sbjct: 2483 ctgccgcctccgccttcgcc 2502
>ref|XM_420896.1| PREDICTED: Gallus gallus nuclear protein NP220 (LOC395593), partial mRNA Length = 2991 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 59 cccccacctcctcctcccgctcctcctc 86 ||||| |||||||||||| ||||||||| Sbjct: 2328 ccccctcctcctcctccccctcctcctc 2301
>gb|AC183639.2| Pan troglodytes chromosome X clone PTB-24B10 map human ortholog p11.23, complete sequence Length = 183185 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 63 cacctcctcctcccgctcctcctc 86 |||||||||||||| ||||||||| Sbjct: 2099 cacctcctcctccccctcctcctc 2122
>gb|AC118286.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OJ1384_A02, complete sequence Length = 100251 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 ctgccgcctccgccttcgcc 113 |||||||||||||||||||| Sbjct: 23330 ctgccgcctccgccttcgcc 23311
>gb|AC108835.8| Mus musculus chromosome 6, clone RP23-274E24, complete sequence Length = 173365 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 59 cccccacctcctcctcccgctcctcctc 86 ||||| |||||||||||| ||||||||| Sbjct: 37133 ccccctcctcctcctccccctcctcctc 37106
>gb|AC113158.3| Mus musculus BAC clone RP23-101D11 from chromosome 9, complete sequence Length = 188085 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 59 cccccacctcctcctcccgctcctcctc 86 ||||| |||||||||||| ||||||||| Sbjct: 66469 ccccctcctcctcctccccctcctcctc 66496
>gb|AC123837.5| Mus musculus BAC clone RP23-385F8 from chromosome 7, complete sequence Length = 208880 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 59 cccccacctcctcctcccgctcctcctc 86 ||||| ||||||||||| |||||||||| Sbjct: 186716 ccccctcctcctcctcctgctcctcctc 186743 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 59 cccccacctcctcctcccgctcctcctc 86 ||||| ||||||||||| |||||||||| Sbjct: 186644 ccccctcctcctcctcctgctcctcctc 186671
>gb|AC184800.2| Pan troglodytes chromosome X clone PTB-18K16 map human ortholog p11.23, complete sequence Length = 142154 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 63 cacctcctcctcccgctcctcctc 86 |||||||||||||| ||||||||| Sbjct: 133294 cacctcctcctccccctcctcctc 133317
>gb|AC135914.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0074P11, complete sequence Length = 148753 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 61 cccacctcctcctcccgctcctcc 84 ||||||||||||||| |||||||| Sbjct: 4757 cccacctcctcctccggctcctcc 4780
>gb|AC104705.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1008_D08, complete sequence Length = 94286 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 61 cccacctcctcctcccgctcctcc 84 ||||||||||||||| |||||||| Sbjct: 78064 cccacctcctcctccggctcctcc 78087
>ref|XM_592170.2| PREDICTED: Bos taurus similar to PWP2 periodic tryptophan protein homolog (LOC514336), mRNA Length = 4134 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 59 cccccacctcctcctcccgctcctcctc 86 ||||| ||||||||||| |||||||||| Sbjct: 1177 ccccctcctcctcctcctgctcctcctc 1150
>gb|AC109232.17| Mus musculus chromosome 7, clone RP23-423P21, complete sequence Length = 201262 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 59 cccccacctcctcctcccgctcctcctc 86 ||||| |||||||||||| ||||||||| Sbjct: 52468 ccccctcctcctcctccccctcctcctc 52441
>gb|AC158619.12| Mus musculus 10 BAC RP23-291O3 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 250421 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 56 ctccccccacctcctcctcccgctcctc 83 |||||||| |||||||||||| |||||| Sbjct: 80521 ctcccccctcctcctcctccccctcctc 80494
>gb|AC098571.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1126_B10, complete sequence Length = 127304 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 96 gccgcctccgccttcgccggcgcc 119 ||||||||||||||||||| |||| Sbjct: 81284 gccgcctccgccttcgccgccgcc 81261
>gb|AC134610.5| Mus musculus BAC clone RP23-79B24 from chromosome 13, complete sequence Length = 235557 Score = 40.1 bits (20), Expect = 7.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 55 tctccccccacctcctcctcccgctcctcctc 86 ||||||||| ||||||||||| ||||||||| Sbjct: 32359 tctcccccctcctcctcctccttctcctcctc 32390
>gb|AC122350.4| Mus musculus BAC clone RP23-383P18 from chromosome 17, complete sequence Length = 198521 Score = 40.1 bits (20), Expect = 7.8 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Plus Query: 55 tctccccccacctcctcctcccgctcctcctc 86 ||||||||| |||||||||||| ||||||||| Sbjct: 30740 tctcccccctcctcctcctccc-ctcctcctc 30770
>gb|AC133954.3| Mus musculus BAC clone RP23-154C17 from chromosome 5, complete sequence Length = 199991 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 59 cccccacctcctcctcccgctcctcctc 86 ||||| |||||||||||| ||||||||| Sbjct: 151712 ccccctcctcctcctccccctcctcctc 151685
>gb|AC122408.4| Mus musculus BAC clone RP24-137E16 from chromosome 10, complete sequence Length = 131580 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 ctccccccacctcctcctcc 75 |||||||||||||||||||| Sbjct: 36221 ctccccccacctcctcctcc 36202
>gb|AC110387.6| Rattus norvegicus 1 BAC CH230-209H8 (Children's Hospital Oakland Research Institute) complete sequence Length = 226439 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 59 cccccacctcctcctcccgctcctcctc 86 ||||| |||||||||||| ||||||||| Sbjct: 162284 ccccctcctcctcctccccctcctcctc 162257 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 59 cccccacctcctcctcccgctcctcctc 86 ||||| |||||||||||| ||||||||| Sbjct: 162251 ccccctcctcctcctccccctcctcctc 162224
>ref|NM_017831.2| Homo sapiens ring finger protein 125 (RNF125), mRNA Length = 1916 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 89 ggcggctgccgcctccgcct 108 |||||||||||||||||||| Sbjct: 126 ggcggctgccgcctccgcct 145 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,902,325 Number of Sequences: 3902068 Number of extensions: 4902325 Number of successful extensions: 290780 Number of sequences better than 10.0: 485 Number of HSP's better than 10.0 without gapping: 516 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 280462 Number of HSP's gapped (non-prelim): 10229 length of query: 575 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 552 effective length of database: 17,143,297,704 effective search space: 9463100332608 effective search space used: 9463100332608 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
