ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart48g03 |
|---|---|
| Clone Library Name | barley_pub |
>ODBA_MACFA (Q8HXY4) 2-oxoisovalerate dehydrogenase alpha subunit,| mitochondrial precursor (EC 1.2.4.4) (Branched-chain alpha-keto acid dehydrogenase E1 component alpha chain) (BCKDH E1-alpha) Length = 445 Score = 84.3 bits (207), Expect = 3e-16 Identities = 42/95 (44%), Positives = 57/95 (60%) Frame = +1 Query: 331 FPGGKLSFVGEMNFLPESQTERINCYRVLDDDGGTIYNSRFQEVSKDLALKMYSNMVTLQ 510 FPG F+ ++ F+ + I YRV+D G I S + K+ LK+Y +M L Sbjct: 54 FPGASAEFIDKLEFIQPNVISGIPIYRVMDRQGQIINPSEDPHLPKEKVLKLYKSMTLLN 113 Query: 511 IMDTIFYEAQRQGRISFYLTSNGEEAINIASAAAL 615 MD I YE+QRQGRISFY+T+ GEE ++ SAAAL Sbjct: 114 TMDRILYESQRQGRISFYMTNYGEEGTHVGSAAAL 148
>ODBA_HUMAN (P12694) 2-oxoisovalerate dehydrogenase alpha subunit,| mitochondrial precursor (EC 1.2.4.4) (Branched-chain alpha-keto acid dehydrogenase E1 component alpha chain) (BCKDH E1-alpha) (BCKDE1A) Length = 445 Score = 84.3 bits (207), Expect = 3e-16 Identities = 42/95 (44%), Positives = 57/95 (60%) Frame = +1 Query: 331 FPGGKLSFVGEMNFLPESQTERINCYRVLDDDGGTIYNSRFQEVSKDLALKMYSNMVTLQ 510 FPG F+ ++ F+ + I YRV+D G I S + K+ LK+Y +M L Sbjct: 54 FPGASAEFIDKLEFIQPNVISGIPIYRVMDRQGQIINPSEDPHLPKEKVLKLYKSMTLLN 113 Query: 511 IMDTIFYEAQRQGRISFYLTSNGEEAINIASAAAL 615 MD I YE+QRQGRISFY+T+ GEE ++ SAAAL Sbjct: 114 TMDRILYESQRQGRISFYMTNYGEEGTHVGSAAAL 148
>ODBA_RAT (P11960) 2-oxoisovalerate dehydrogenase alpha subunit,| mitochondrial precursor (EC 1.2.4.4) (Branched-chain alpha-keto acid dehydrogenase E1 component alpha chain) (BCKDH E1-alpha) (Fragment) Length = 441 Score = 82.4 bits (202), Expect = 1e-15 Identities = 42/95 (44%), Positives = 57/95 (60%) Frame = +1 Query: 331 FPGGKLSFVGEMNFLPESQTERINCYRVLDDDGGTIYNSRFQEVSKDLALKMYSNMVTLQ 510 FPG FV ++ F+ + I YRV+D G I S + ++ LK+Y +M L Sbjct: 50 FPGASAEFVDKLEFIQPNVISGIPIYRVMDRQGQIINPSEDPHLPQEEVLKLYRSMTLLN 109 Query: 511 IMDTIFYEAQRQGRISFYLTSNGEEAINIASAAAL 615 MD I YE+QRQGRISFY+T+ GEE ++ SAAAL Sbjct: 110 TMDRILYESQRQGRISFYMTNYGEEGTHVGSAAAL 144
>ODBA_BOVIN (P11178) 2-oxoisovalerate dehydrogenase alpha subunit,| mitochondrial precursor (EC 1.2.4.4) (Branched-chain alpha-keto acid dehydrogenase E1 component alpha chain) (BCKDH E1-alpha) Length = 455 Score = 82.0 bits (201), Expect = 1e-15 Identities = 41/95 (43%), Positives = 56/95 (58%) Frame = +1 Query: 331 FPGGKLSFVGEMNFLPESQTERINCYRVLDDDGGTIYNSRFQEVSKDLALKMYSNMVTLQ 510 FPG F+ ++ F+ + I YRV+D G I S + ++ LK Y +M L Sbjct: 64 FPGASAEFIDKLEFIQPNVISGIPIYRVMDRQGQIINPSEDPHLPQEKVLKFYKSMTLLN 123 Query: 511 IMDTIFYEAQRQGRISFYLTSNGEEAINIASAAAL 615 MD I YE+QRQGRISFY+T+ GEE ++ SAAAL Sbjct: 124 TMDRILYESQRQGRISFYMTNYGEEGTHVGSAAAL 158
>ODBA_MOUSE (P50136) 2-oxoisovalerate dehydrogenase alpha subunit,| mitochondrial precursor (EC 1.2.4.4) (Branched-chain alpha-keto acid dehydrogenase E1 component alpha chain) (BCKDH E1-alpha) Length = 442 Score = 80.5 bits (197), Expect = 4e-15 Identities = 41/95 (43%), Positives = 56/95 (58%) Frame = +1 Query: 331 FPGGKLSFVGEMNFLPESQTERINCYRVLDDDGGTIYNSRFQEVSKDLALKMYSNMVTLQ 510 FPG FV ++ F+ + I YRV+D G I S + ++ LK Y +M L Sbjct: 51 FPGASAEFVDKLEFIQPNVISGIPIYRVMDRQGQIINPSEDPHLPQEEVLKFYRSMTLLN 110 Query: 511 IMDTIFYEAQRQGRISFYLTSNGEEAINIASAAAL 615 MD I YE+QR+GRISFY+T+ GEE ++ SAAAL Sbjct: 111 TMDRILYESQREGRISFYMTNYGEEGTHVGSAAAL 145
>ODPA_BACST (P21873) Pyruvate dehydrogenase E1 component, alpha subunit (EC| 1.2.4.1) Length = 368 Score = 45.8 bits (107), Expect = 1e-04 Identities = 24/79 (30%), Positives = 41/79 (51%) Frame = +1 Query: 379 ESQTERINCYRVLDDDGGTIYNSRFQEVSKDLALKMYSNMVTLQIMDTIFYEAQRQGRIS 558 E E+ +++L+++G + E+S + ++ MV +I+D RQGR+ Sbjct: 14 EKVAEQFPTFQILNEEGEVVNEEAMPELSDEQLKELMRRMVYTRILDQRSISLNRQGRLG 73 Query: 559 FYLTSNGEEAINIASAAAL 615 FY + G+EA IAS AL Sbjct: 74 FYAPTAGQEASQIASHFAL 92
>ODPA_STAES (Q8CPN3) Pyruvate dehydrogenase E1 component, alpha subunit (EC| 1.2.4.1) Length = 370 Score = 45.4 bits (106), Expect = 1e-04 Identities = 24/81 (29%), Positives = 44/81 (54%) Frame = +1 Query: 373 LPESQTERINCYRVLDDDGGTIYNSRFQEVSKDLALKMYSNMVTLQIMDTIFYEAQRQGR 552 L E+Q+ + ++LD+DG + +++ + +++ MV +I+D RQGR Sbjct: 15 LNETQS-KFEMVQILDEDGNVVNEDLVPDLTDEQLVELMERMVWTRILDQRSISLNRQGR 73 Query: 553 ISFYLTSNGEEAINIASAAAL 615 + FY + G+EA +AS AL Sbjct: 74 LGFYAPTAGQEASQLASQYAL 94
>ODPA_STAEQ (Q5HQ76) Pyruvate dehydrogenase E1 component, alpha subunit (EC| 1.2.4.1) Length = 370 Score = 45.4 bits (106), Expect = 1e-04 Identities = 24/81 (29%), Positives = 44/81 (54%) Frame = +1 Query: 373 LPESQTERINCYRVLDDDGGTIYNSRFQEVSKDLALKMYSNMVTLQIMDTIFYEAQRQGR 552 L E+Q+ + ++LD+DG + +++ + +++ MV +I+D RQGR Sbjct: 15 LNETQS-KFEMVQILDEDGNVVNEDLVPDLTDEQLVELMERMVWTRILDQRSISLNRQGR 73 Query: 553 ISFYLTSNGEEAINIASAAAL 615 + FY + G+EA +AS AL Sbjct: 74 LGFYAPTAGQEASQLASQYAL 94
>ODPA_STAAW (P60090) Pyruvate dehydrogenase E1 component, alpha subunit (EC| 1.2.4.1) Length = 370 Score = 42.7 bits (99), Expect = 8e-04 Identities = 20/69 (28%), Positives = 38/69 (55%) Frame = +1 Query: 409 RVLDDDGGTIYNSRFQEVSKDLALKMYSNMVTLQIMDTIFYEAQRQGRISFYLTSNGEEA 588 ++LD++G + +++ + +++ MV +I+D RQGR+ FY + G+EA Sbjct: 26 QILDENGNVVNEDLVPDLTDEQLVELMERMVWTRILDQRSISLNRQGRLGFYAPTAGQEA 85 Query: 589 INIASAAAL 615 +AS AL Sbjct: 86 SQLASQYAL 94
>ODPA_STAAS (Q6GAC1) Pyruvate dehydrogenase E1 component, alpha subunit (EC| 1.2.4.1) Length = 370 Score = 42.7 bits (99), Expect = 8e-04 Identities = 20/69 (28%), Positives = 38/69 (55%) Frame = +1 Query: 409 RVLDDDGGTIYNSRFQEVSKDLALKMYSNMVTLQIMDTIFYEAQRQGRISFYLTSNGEEA 588 ++LD++G + +++ + +++ MV +I+D RQGR+ FY + G+EA Sbjct: 26 QILDENGNVVNEDLVPDLTDEQLVELMERMVWTRILDQRSISLNRQGRLGFYAPTAGQEA 85 Query: 589 INIASAAAL 615 +AS AL Sbjct: 86 SQLASQYAL 94
>ODPA_STAAR (Q6GHZ2) Pyruvate dehydrogenase E1 component, alpha subunit (EC| 1.2.4.1) Length = 370 Score = 42.7 bits (99), Expect = 8e-04 Identities = 20/69 (28%), Positives = 38/69 (55%) Frame = +1 Query: 409 RVLDDDGGTIYNSRFQEVSKDLALKMYSNMVTLQIMDTIFYEAQRQGRISFYLTSNGEEA 588 ++LD++G + +++ + +++ MV +I+D RQGR+ FY + G+EA Sbjct: 26 QILDENGNVVNEDLVPDLTDEQLVELMERMVWTRILDQRSISLNRQGRLGFYAPTAGQEA 85 Query: 589 INIASAAAL 615 +AS AL Sbjct: 86 SQLASQYAL 94
>ODPA_STAAN (Q820A6) Pyruvate dehydrogenase E1 component, alpha subunit (EC| 1.2.4.1) Length = 370 Score = 42.7 bits (99), Expect = 8e-04 Identities = 20/69 (28%), Positives = 38/69 (55%) Frame = +1 Query: 409 RVLDDDGGTIYNSRFQEVSKDLALKMYSNMVTLQIMDTIFYEAQRQGRISFYLTSNGEEA 588 ++LD++G + +++ + +++ MV +I+D RQGR+ FY + G+EA Sbjct: 26 QILDENGNVVNEDLVPDLTDEQLVELMERMVWTRILDQRSISLNRQGRLGFYAPTAGQEA 85 Query: 589 INIASAAAL 615 +AS AL Sbjct: 86 SQLASQYAL 94
>ODPA_STAAM (P60089) Pyruvate dehydrogenase E1 component, alpha subunit (EC| 1.2.4.1) Length = 370 Score = 42.7 bits (99), Expect = 8e-04 Identities = 20/69 (28%), Positives = 38/69 (55%) Frame = +1 Query: 409 RVLDDDGGTIYNSRFQEVSKDLALKMYSNMVTLQIMDTIFYEAQRQGRISFYLTSNGEEA 588 ++LD++G + +++ + +++ MV +I+D RQGR+ FY + G+EA Sbjct: 26 QILDENGNVVNEDLVPDLTDEQLVELMERMVWTRILDQRSISLNRQGRLGFYAPTAGQEA 85 Query: 589 INIASAAAL 615 +AS AL Sbjct: 86 SQLASQYAL 94
>ODPA_STAAC (Q5HGZ1) Pyruvate dehydrogenase E1 component, alpha subunit (EC| 1.2.4.1) Length = 370 Score = 42.7 bits (99), Expect = 8e-04 Identities = 20/69 (28%), Positives = 38/69 (55%) Frame = +1 Query: 409 RVLDDDGGTIYNSRFQEVSKDLALKMYSNMVTLQIMDTIFYEAQRQGRISFYLTSNGEEA 588 ++LD++G + +++ + +++ MV +I+D RQGR+ FY + G+EA Sbjct: 26 QILDENGNVVNEDLVPDLTDEQLVELMERMVWTRILDQRSISLNRQGRLGFYAPTAGQEA 85 Query: 589 INIASAAAL 615 +AS AL Sbjct: 86 SQLASQYAL 94
>ODPA_BACSU (P21881) Pyruvate dehydrogenase E1 component, alpha subunit (EC| 1.2.4.1) (S complex, 42 kDa subunit) (Vegetative protein 220) (VEG220) Length = 370 Score = 40.8 bits (94), Expect = 0.003 Identities = 19/75 (25%), Positives = 40/75 (53%) Frame = +1 Query: 391 ERINCYRVLDDDGGTIYNSRFQEVSKDLALKMYSNMVTLQIMDTIFYEAQRQGRISFYLT 570 ++ +++L++ G + + +++ D ++ MV +++D RQGR+ FY Sbjct: 20 KQFETFQILNEKGEVVNEAAMPDLTDDQLKELMRRMVFTRVLDQRSISLNRQGRLGFYAP 79 Query: 571 SNGEEAINIASAAAL 615 + G+EA IA+ AL Sbjct: 80 TAGQEASQIATHFAL 94
>ODPA_ACHLA (P35485) Pyruvate dehydrogenase E1 component, alpha subunit (EC| 1.2.4.1) (Fragment) Length = 345 Score = 40.0 bits (92), Expect = 0.005 Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 1/66 (1%) Frame = +1 Query: 421 DDGGTIYNSRFQ-EVSKDLALKMYSNMVTLQIMDTIFYEAQRQGRISFYLTSNGEEAINI 597 D G + N + + ++ K+ LKMY V + D + QRQGR+ Y + G+EA I Sbjct: 1 DQNGKVVNEKMEPKLPKETLLKMYKTAVLGRNADIKALQYQRQGRMLTYAPNMGQEAAQI 60 Query: 598 ASAAAL 615 AAA+ Sbjct: 61 GMAAAM 66
>ODBA_PSEPU (P09060) 2-oxoisovalerate dehydrogenase alpha subunit (EC 1.2.4.4)| (Branched-chain alpha-keto acid dehydrogenase E1 component alpha chain) (BCKDH E1-alpha) Length = 410 Score = 38.5 bits (88), Expect = 0.016 Identities = 24/69 (34%), Positives = 36/69 (52%) Frame = +1 Query: 409 RVLDDDGGTIYNSRFQEVSKDLALKMYSNMVTLQIMDTIFYEAQRQGRISFYLTSNGEEA 588 RVLD+ G +++ + + M+ +I D+ AQRQ ++SFY+ S GEEA Sbjct: 56 RVLDEQGDA-QGPWAEDIDPQILRQGMRAMLKTRIFDSRMVVAQRQKKMSFYMQSLGEEA 114 Query: 589 INIASAAAL 615 I A AL Sbjct: 115 IGSGQALAL 123
>ODBA_BACSU (P37940) 2-oxoisovalerate dehydrogenase alpha subunit (EC 1.2.4.4)| (Branched-chain alpha-keto acid dehydrogenase E1 component alpha chain) (BCKDH E1-alpha) Length = 330 Score = 32.0 bits (71), Expect = 1.5 Identities = 15/47 (31%), Positives = 26/47 (55%) Frame = +1 Query: 475 ALKMYSNMVTLQIMDTIFYEAQRQGRISFYLTSNGEEAINIASAAAL 615 A+ MY M+ + +D + R G+I F ++ G+EA + +A AL Sbjct: 16 AVDMYRTMLLARKIDERMWLLNRSGKIPFVISCQGQEAAQVGAAFAL 62
>RADA_PICTO (Q6L126) DNA repair and recombination protein radA| Length = 323 Score = 32.0 bits (71), Expect = 1.5 Identities = 28/101 (27%), Positives = 42/101 (41%), Gaps = 18/101 (17%) Frame = -2 Query: 528 EYCVHNLEGDHVTVHFQSQVLA----------------DLLESTVVYSATIVVKNTVTVD 397 EY + L D +T HF+S+ + DLL+ +Y+A I V N V+ + Sbjct: 200 EYKIRLLIVDSLTSHFRSEYVGRGSLAERQQLLNRHMHDLLKFGTIYNAVIAVTNQVSAN 259 Query: 396 P--FRLRLWQEIHFTNKGKLSSREIYTLQTACGKSILRFLD 280 P F I G ++ IY + GK I R +D Sbjct: 260 PAVFFGDPMNPIGGNIVGHTATFRIYLRKAKAGKRIARLID 300
>TYPA_HAEIN (P44910) GTP-binding protein typA/bipA homolog| Length = 616 Score = 31.2 bits (69), Expect = 2.5 Identities = 23/77 (29%), Positives = 38/77 (49%) Frame = -2 Query: 507 EGDHVTVHFQSQVLADLLESTVVYSATIVVKNTVTVDPFRLRLWQEIHFTNKGKLSSREI 328 EG +VT S+ + + L +V++ + V+ T D FR+ E+H + + RE Sbjct: 328 EGKYVT----SRQILERLNKELVHNVALRVEETPNPDEFRVSGRGELHLSVLIENMRREG 383 Query: 327 YTLQTACGKSILRFLDG 277 Y L + K I R +DG Sbjct: 384 YELAVSRPKVIYRDIDG 400
>SYT_PROAC (Q6A8U3) Threonyl-tRNA synthetase (EC 6.1.1.3) (Threonine--tRNA| ligase) (ThrRS) Length = 684 Score = 30.8 bits (68), Expect = 3.3 Identities = 18/40 (45%), Positives = 21/40 (52%), Gaps = 4/40 (10%) Frame = -2 Query: 159 STTAQLASDPPGSPAYQPRGHVYVRDYLG----THTISYD 52 ST QL DP G+ Y P+ V VRD +G TI YD Sbjct: 480 STGLQLVPDPGGAAFYGPKVSVQVRDAIGRTWQMSTIQYD 519
>TYPA_SHIFL (P0A3B4) GTP-binding protein typA/bipA (Tyrosine phosphorylated| protein A) Length = 607 Score = 30.8 bits (68), Expect = 3.3 Identities = 23/77 (29%), Positives = 37/77 (48%) Frame = -2 Query: 507 EGDHVTVHFQSQVLADLLESTVVYSATIVVKNTVTVDPFRLRLWQEIHFTNKGKLSSREI 328 EG VT S+ + D L +V++ + V+ T D FR+ E+H + + RE Sbjct: 322 EGKFVT----SRQILDRLNKELVHNVALRVEETEDADAFRVSGRGELHLSVLIENMRREG 377 Query: 327 YTLQTACGKSILRFLDG 277 + L + K I R +DG Sbjct: 378 FELAVSRPKVIFREIDG 394
>TYPA_ECOLI (P32132) GTP-binding protein typA/BipA (Tyrosine phosphorylated| protein A) Length = 607 Score = 30.8 bits (68), Expect = 3.3 Identities = 23/77 (29%), Positives = 37/77 (48%) Frame = -2 Query: 507 EGDHVTVHFQSQVLADLLESTVVYSATIVVKNTVTVDPFRLRLWQEIHFTNKGKLSSREI 328 EG VT S+ + D L +V++ + V+ T D FR+ E+H + + RE Sbjct: 322 EGKFVT----SRQILDRLNKELVHNVALRVEETEDADAFRVSGRGELHLSVLIENMRREG 377 Query: 327 YTLQTACGKSILRFLDG 277 + L + K I R +DG Sbjct: 378 FELAVSRPKVIFREIDG 394
>TYPA_ECOL6 (P0A3B1) GTP-binding protein typA/bipA (Tyrosine phosphorylated| protein A) Length = 607 Score = 30.8 bits (68), Expect = 3.3 Identities = 23/77 (29%), Positives = 37/77 (48%) Frame = -2 Query: 507 EGDHVTVHFQSQVLADLLESTVVYSATIVVKNTVTVDPFRLRLWQEIHFTNKGKLSSREI 328 EG VT S+ + D L +V++ + V+ T D FR+ E+H + + RE Sbjct: 322 EGKFVT----SRQILDRLNKELVHNVALRVEETEDADAFRVSGRGELHLSVLIENMRREG 377 Query: 327 YTLQTACGKSILRFLDG 277 + L + K I R +DG Sbjct: 378 FELAVSRPKVIFREIDG 394
>TYPA_ECO57 (P0A3B3) GTP-binding protein typA/bipA (Tyrosine phosphorylated| protein A) Length = 607 Score = 30.8 bits (68), Expect = 3.3 Identities = 23/77 (29%), Positives = 37/77 (48%) Frame = -2 Query: 507 EGDHVTVHFQSQVLADLLESTVVYSATIVVKNTVTVDPFRLRLWQEIHFTNKGKLSSREI 328 EG VT S+ + D L +V++ + V+ T D FR+ E+H + + RE Sbjct: 322 EGKFVT----SRQILDRLNKELVHNVALRVEETEDADAFRVSGRGELHLSVLIENMRREG 377 Query: 327 YTLQTACGKSILRFLDG 277 + L + K I R +DG Sbjct: 378 FELAVSRPKVIFREIDG 394
>TYPA_ECO27 (P0A3B2) GTP-binding protein typA/bipA (Tyrosine phosphorylated| protein A) Length = 607 Score = 30.8 bits (68), Expect = 3.3 Identities = 23/77 (29%), Positives = 37/77 (48%) Frame = -2 Query: 507 EGDHVTVHFQSQVLADLLESTVVYSATIVVKNTVTVDPFRLRLWQEIHFTNKGKLSSREI 328 EG VT S+ + D L +V++ + V+ T D FR+ E+H + + RE Sbjct: 322 EGKFVT----SRQILDRLNKELVHNVALRVEETEDADAFRVSGRGELHLSVLIENMRREG 377 Query: 327 YTLQTACGKSILRFLDG 277 + L + K I R +DG Sbjct: 378 FELAVSRPKVIFREIDG 394
>SMUF1_DROME (Q9V853) E3 ubiquitin-protein ligase Smurf1 (EC 6.3.2.-) (Smad| ubiquitination regulatory factor 1 homolog) (DSmurf) (Lethal with a checkpoint kinase protein) Length = 1061 Score = 30.4 bits (67), Expect = 4.3 Identities = 14/38 (36%), Positives = 20/38 (52%) Frame = -1 Query: 217 PLLAPREPGLSTSSRTTALVHDRAARQRPSWQPGVPTT 104 P+ A PG TSS ++ R QRP+ +P PT+ Sbjct: 279 PVSATTTPGKKTSSSNSSSAGGRTLEQRPTNEPATPTS 316
>AFF1_MOUSE (O88573) AF4/FMR2 family member 1 (AF-4 protein) (Proto-oncogene| AF4) Length = 1217 Score = 30.4 bits (67), Expect = 4.3 Identities = 19/60 (31%), Positives = 25/60 (41%), Gaps = 3/60 (5%) Frame = +2 Query: 128 GGSLASCAVVDQGRGP*ARRQSR---FSGCQQWTKAGRSAPSGASQEIAPPPLPSRNRRM 298 G S SC V + A+ Q + G T G + P Q PPPLPS++ M Sbjct: 213 GVSSKSCCVAKSSKDLVAKAQDKETPHDGLVAVTSLGSAPPQPPCQTFPPPPLPSKSAAM 272
>ZHX3_HUMAN (Q9H4I2) Zinc finger and homeobox protein 3 (Triple homeobox 1| protein) Length = 956 Score = 30.0 bits (66), Expect = 5.6 Identities = 22/81 (27%), Positives = 33/81 (40%) Frame = -2 Query: 258 SCEAPDGAERPALVHCWHPENRDCRRAQGPRPWSTTAQLASDPPGSPAYQPRGHVYVRDY 79 S A G RP +V W ++R + G W + + PPG P ++DY Sbjct: 796 SIMAQTGLPRPEVVR-WFGDSRYALK-NGQLKWYEDYKRGNFPPGLLVIAPGNRELLQDY 853 Query: 78 LGTHTISYDASFRRDQLQEFC 16 TH + Y+ + LQ C Sbjct: 854 YMTHKMLYE-----EDLQNLC 869
>LRFN4_HUMAN (Q6PJG9) Leucine-rich repeat and fibronectin type-III| domain-containing protein 4 precursor Length = 635 Score = 29.6 bits (65), Expect = 7.3 Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 1/58 (1%) Frame = +2 Query: 149 AVVDQGRGP*-ARRQSRFSGCQQWTKAGRSAPSGASQEIAPPPLPSRNRRMDLPQAVC 319 A++ +GRG R + S Q T G S A +PPP P R+ +DL A C Sbjct: 536 ALLVRGRGAGNGRLPLKLSHVQSQTNGGPSPTPKAHPPRSPPPRPQRSCSLDLGDAGC 593
>RADA_THEAC (Q9HJ68) DNA repair and recombination protein radA| Length = 323 Score = 29.6 bits (65), Expect = 7.3 Identities = 28/101 (27%), Positives = 41/101 (40%), Gaps = 18/101 (17%) Frame = -2 Query: 528 EYCVHNLEGDHVTVHFQSQVLA----------------DLLESTVVYSATIVVKNTVTVD 397 EY + L D +T HF+S+ + DLL +Y+A I V N V+ Sbjct: 201 EYNIKLLIVDSLTAHFRSEYVGRGSLAERQQLLNKHMHDLLRFGTIYNAVIAVTNQVSAR 260 Query: 396 P--FRLRLWQEIHFTNKGKLSSREIYTLQTACGKSILRFLD 280 P F I G ++ IY ++ GK I R +D Sbjct: 261 PDVFFGDPMAPIGGNIVGHTATFRIYLRKSKGGKRIARLID 301
>IRAK1_MOUSE (Q62406) Interleukin-1 receptor-associated kinase 1 (EC 2.7.11.1)| (IRAK-1) (IRAK) (Pelle-like protein kinase) (mPLK) Length = 710 Score = 29.3 bits (64), Expect = 9.6 Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 11/68 (16%) Frame = -3 Query: 491 LYIFRAKSLLTSWNLLLYIVPPSSSRTR*QLILSVCDSG----RK-------FISPTKES 345 L + RA+ ++T+W+ +VPPS++ R I + ++G RK F+SP Sbjct: 90 LQLLRARDIITAWHPPAPVVPPSTAAPRPSSISAGSEAGDWSPRKLQSSASTFLSPAF-- 147 Query: 344 FPPGKSTH 321 PG TH Sbjct: 148 --PGSQTH 153
>DRE2C_ARATH (Q8LFR2) Dehydration-responsive element-binding protein 2C (DREB2C| protein) Length = 341 Score = 29.3 bits (64), Expect = 9.6 Identities = 23/86 (26%), Positives = 34/86 (39%), Gaps = 1/86 (1%) Frame = -2 Query: 285 LDGSGGGAISCEAPDGAERPALVHCWHPENRDC-RRAQGPRPWSTTAQLASDPPGSPAYQ 109 +DG G +I P G+ + + PEN C R R W +P G Sbjct: 38 IDGGGPKSIRKPPPKGSRKGCMKGKGGPENGICDYRGVRQRRWGKWVAEIREPDGG---- 93 Query: 108 PRGHVYVRDYLGTHTISYDASFRRDQ 31 R +LGT + SY+A+ D+ Sbjct: 94 ------ARLWLGTFSSSYEAALAYDE 113
>MTP7_PSEAE (P05103) Modification methylase PaeR7I (EC 2.1.1.72)| (Adenine-specific methyltransferase PaeR7I) (M.PaeR7I) Length = 549 Score = 29.3 bits (64), Expect = 9.6 Identities = 18/56 (32%), Positives = 26/56 (46%) Frame = -3 Query: 203 PRTGTVDELKDHGPGPRPRSSPATLLAARRTNHAAMYMYVTI*VHTLSRTMRASGA 36 P G D + + P RP PA LLA R+ + MY I + + R++ A A Sbjct: 127 PLEGQFDFVVGNPPYVRPELIPAPLLAEYRSRYQTMYDRADIYIPFIERSLTALSA 182
>NAB3_YEAST (P38996) Nuclear polyadenylated RNA-binding protein 3| Length = 802 Score = 29.3 bits (64), Expect = 9.6 Identities = 20/43 (46%), Positives = 23/43 (53%), Gaps = 1/43 (2%) Frame = +2 Query: 218 TKAGRSAPSGA-SQEIAPPPLPSRNRRMDLPQAVCSV*ISLEE 343 T A SA SGA S + PPL RRM P+A S I+ EE Sbjct: 264 TTASASATSGARSNDQRKPPLSDAQRRMRFPRADLSKPITEEE 306
>CPNE5_MOUSE (Q8JZW4) Copine-5 (Copine V)| Length = 593 Score = 29.3 bits (64), Expect = 9.6 Identities = 14/28 (50%), Positives = 16/28 (57%) Frame = -2 Query: 183 RAQGPRPWSTTAQLASDPPGSPAYQPRG 100 +AQG RP A A PP SPA+ P G Sbjct: 559 KAQGIRPRPPPAAPAQSPPQSPAHSPPG 586 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 96,987,633 Number of Sequences: 219361 Number of extensions: 2220253 Number of successful extensions: 7200 Number of sequences better than 10.0: 36 Number of HSP's better than 10.0 without gapping: 6727 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 7197 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5538924943 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
