ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart48f08 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT008921.1| Triticum aestivum clone wyr1c.pk002.o12:fis, full insert mRNA sequence Length = 1348 Score = 850 bits (429), Expect = 0.0 Identities = 495/517 (95%) Strand = Plus / Plus Query: 40 agtttggcgacgacgagttcggccacatgctggtggagatcctgaagcagaacggcgtca 99 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 291 agtttggcgacgacgagttcggccacatgctggtggagatcctgaagcagaacggcgtaa 350 Query: 100 acgccgagggctgcctgttcgaccagcacgcgcgcacggccctggccttcgtcacgctca 159 ||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||| Sbjct: 351 acgccgagggctgcctgttcgaccagcacgcgcgcaccgcgctggccttcgtcacgctca 410 Query: 160 aggccaacggcgagcgcgagttcatgttctaccgcaacccgtcggccgacatgctgctca 219 || |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 411 agtccaacggcgagcgcgagttcatgttctaccgcaacccgtcggccgacatgttgctca 470 Query: 220 cggaggccgagctcaacctggacctcatccgccgcgcccgcatcttccactacggctcca 279 | ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 471 ccgaggccgagctcaacctggacctgatccgccgcgcccgcatcttccactacggctcca 530 Query: 280 tctcgctcatcaccgagccctgccgctcggcgcacgtcgccgccatgcgcgctgccaagt 339 ||||||||||||||||||||||||||||||| ||||||||||||| ||| || ||||||| Sbjct: 531 tctcgctcatcaccgagccctgccgctcggcccacgtcgccgccacgcgtgccgccaagt 590 Query: 340 cggccggcatcctctgctcgtacgaccccaacgtgcgcctcccgctctggccctcggccc 399 ||||||||||||| || ||||||||||||||||||||||| |||||||||||||| || | Sbjct: 591 cggccggcatcctttgttcgtacgaccccaacgtgcgcctgccgctctggccctctgcgc 650 Query: 400 aggccgcccgcgacggcgtcatgagcatctggaaggaggccgacttcatcaaggtgagcg 459 ||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||| Sbjct: 651 aggccgcccgcgacggcatcatgagcatctggaaggaggctgacttcatcaaggtgagcg 710 Query: 460 acgatgaggtggccttcctcacccagggcgacgccaacgacgagaagaacgtgctctccc 519 |||| ||||| ||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 711 acgaggaggtagccttcctcacccagggcgacgccactgacgagaagaacgtgctctccc 770 Query: 520 tctggttcgagggcctcaagctgctcatcgtcaccga 556 ||||||||||||||||||||||||||||||||||||| Sbjct: 771 tctggttcgagggcctcaagctgctcatcgtcaccga 807
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 591 bits (298), Expect = e-165 Identities = 466/522 (89%) Strand = Plus / Plus Query: 37 tgcagtttggcgacgacgagttcggccacatgctggtggagatcctgaagcagaacggcg 96 |||||||||| || || |||||||| |||||||||||||| ||||||||| ||||||| | Sbjct: 696444 tgcagtttggtgatgatgagttcgggcacatgctggtggacatcctgaagaagaacgggg 696503 Query: 97 tcaacgccgagggctgcctgttcgaccagcacgcgcgcacggccctggccttcgtcacgc 156 | ||||| ||||| |||||||||||| |||||||||||||||| ||||| ||||| || Sbjct: 696504 tgaacgcggaggggtgcctgttcgacgagcacgcgcgcacggcgctggcgttcgtgacct 696563 Query: 157 tcaaggccaacggcgagcgcgagttcatgttctaccgcaacccgtcggccgacatgctgc 216 | || |||||||||||||||||||||||||||||| |||||| ||||||||||| | Sbjct: 696564 tgaaaagcaacggcgagcgcgagttcatgttctaccggaacccgagcgccgacatgctcc 696623 Query: 217 tcacggaggccgagctcaacctggacctcatccgccgcgcccgcatcttccactacggct 276 | |||||||| ||||||||||||||||| ||||| |||||| |||||||||||||||| Sbjct: 696624 tgacggaggcggagctcaacctggacctgatccggcgcgccaagatcttccactacggct 696683 Query: 277 ccatctcgctcatcaccgagccctgccgctcggcgcacgtcgccgccatgcgcgctgcca 336 ||||||| |||||||||||||| |||||||| || |||||||||||||||||||| |||| Sbjct: 696684 ccatctccctcatcaccgagccgtgccgctccgcccacgtcgccgccatgcgcgccgcca 696743 Query: 337 agtcggccggcatcctctgctcgtacgaccccaacgtgcgcctcccgctctggccctcgg 396 |||||||||||||||||||||| |||||||||||||| ||||||||||||||||| || | Sbjct: 696744 agtcggccggcatcctctgctcctacgaccccaacgtccgcctcccgctctggccgtccg 696803 Query: 397 cccaggccgcccgcgacggcgtcatgagcatctggaaggaggccgacttcatcaaggtga 456 | |||||||||| |||| || | |||||||||||||||||||||||||||||||| Sbjct: 696804 aggacgccgcccgcgccggcatcctctccatctggaaggaggccgacttcatcaaggtga 696863 Query: 457 gcgacgatgaggtggccttcctcacccagggcgacgccaacgacgagaagaacgtgctct 516 ||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 696864 gcgacgacgaggtcgccttcctcacccagggcgacgccaacgacgagaagaacgtgctct 696923 Query: 517 ccctctggttcgagggcctcaagctgctcatcgtcaccgacg 558 | ||||||||||| ||||||||||| |||||||||||||||| Sbjct: 696924 cgctctggttcgacggcctcaagctcctcatcgtcaccgacg 696965
>dbj|AP004566.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0498H04 Length = 151046 Score = 591 bits (298), Expect = e-165 Identities = 466/522 (89%) Strand = Plus / Plus Query: 37 tgcagtttggcgacgacgagttcggccacatgctggtggagatcctgaagcagaacggcg 96 |||||||||| || || |||||||| |||||||||||||| ||||||||| ||||||| | Sbjct: 123822 tgcagtttggtgatgatgagttcgggcacatgctggtggacatcctgaagaagaacgggg 123881 Query: 97 tcaacgccgagggctgcctgttcgaccagcacgcgcgcacggccctggccttcgtcacgc 156 | ||||| ||||| |||||||||||| |||||||||||||||| ||||| ||||| || Sbjct: 123882 tgaacgcggaggggtgcctgttcgacgagcacgcgcgcacggcgctggcgttcgtgacct 123941 Query: 157 tcaaggccaacggcgagcgcgagttcatgttctaccgcaacccgtcggccgacatgctgc 216 | || |||||||||||||||||||||||||||||| |||||| ||||||||||| | Sbjct: 123942 tgaaaagcaacggcgagcgcgagttcatgttctaccggaacccgagcgccgacatgctcc 124001 Query: 217 tcacggaggccgagctcaacctggacctcatccgccgcgcccgcatcttccactacggct 276 | |||||||| ||||||||||||||||| ||||| |||||| |||||||||||||||| Sbjct: 124002 tgacggaggcggagctcaacctggacctgatccggcgcgccaagatcttccactacggct 124061 Query: 277 ccatctcgctcatcaccgagccctgccgctcggcgcacgtcgccgccatgcgcgctgcca 336 ||||||| |||||||||||||| |||||||| || |||||||||||||||||||| |||| Sbjct: 124062 ccatctccctcatcaccgagccgtgccgctccgcccacgtcgccgccatgcgcgccgcca 124121 Query: 337 agtcggccggcatcctctgctcgtacgaccccaacgtgcgcctcccgctctggccctcgg 396 |||||||||||||||||||||| |||||||||||||| ||||||||||||||||| || | Sbjct: 124122 agtcggccggcatcctctgctcctacgaccccaacgtccgcctcccgctctggccgtccg 124181 Query: 397 cccaggccgcccgcgacggcgtcatgagcatctggaaggaggccgacttcatcaaggtga 456 | |||||||||| |||| || | |||||||||||||||||||||||||||||||| Sbjct: 124182 aggacgccgcccgcgccggcatcctctccatctggaaggaggccgacttcatcaaggtga 124241 Query: 457 gcgacgatgaggtggccttcctcacccagggcgacgccaacgacgagaagaacgtgctct 516 ||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124242 gcgacgacgaggtcgccttcctcacccagggcgacgccaacgacgagaagaacgtgctct 124301 Query: 517 ccctctggttcgagggcctcaagctgctcatcgtcaccgacg 558 | ||||||||||| ||||||||||| |||||||||||||||| Sbjct: 124302 cgctctggttcgacggcctcaagctcctcatcgtcaccgacg 124343
>ref|XM_479756.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1314 Score = 585 bits (295), Expect = e-164 Identities = 463/519 (89%) Strand = Plus / Plus Query: 40 agtttggcgacgacgagttcggccacatgctggtggagatcctgaagcagaacggcgtca 99 ||||||| || || |||||||| |||||||||||||| ||||||||| ||||||| || | Sbjct: 300 agtttggtgatgatgagttcgggcacatgctggtggacatcctgaagaagaacggggtga 359 Query: 100 acgccgagggctgcctgttcgaccagcacgcgcgcacggccctggccttcgtcacgctca 159 |||| ||||| |||||||||||| |||||||||||||||| ||||| ||||| || | | Sbjct: 360 acgcggaggggtgcctgttcgacgagcacgcgcgcacggcgctggcgttcgtgaccttga 419 Query: 160 aggccaacggcgagcgcgagttcatgttctaccgcaacccgtcggccgacatgctgctca 219 | |||||||||||||||||||||||||||||| |||||| ||||||||||| || | Sbjct: 420 aaagcaacggcgagcgcgagttcatgttctaccggaacccgagcgccgacatgctcctga 479 Query: 220 cggaggccgagctcaacctggacctcatccgccgcgcccgcatcttccactacggctcca 279 ||||||| ||||||||||||||||| ||||| |||||| ||||||||||||||||||| Sbjct: 480 cggaggcggagctcaacctggacctgatccggcgcgccaagatcttccactacggctcca 539 Query: 280 tctcgctcatcaccgagccctgccgctcggcgcacgtcgccgccatgcgcgctgccaagt 339 |||| |||||||||||||| |||||||| || |||||||||||||||||||| ||||||| Sbjct: 540 tctccctcatcaccgagccgtgccgctccgcccacgtcgccgccatgcgcgccgccaagt 599 Query: 340 cggccggcatcctctgctcgtacgaccccaacgtgcgcctcccgctctggccctcggccc 399 ||||||||||||||||||| |||||||||||||| ||||||||||||||||| || | Sbjct: 600 cggccggcatcctctgctcctacgaccccaacgtccgcctcccgctctggccgtccgagg 659 Query: 400 aggccgcccgcgacggcgtcatgagcatctggaaggaggccgacttcatcaaggtgagcg 459 | |||||||||| |||| || | ||||||||||||||||||||||||||||||||||| Sbjct: 660 acgccgcccgcgccggcatcctctccatctggaaggaggccgacttcatcaaggtgagcg 719 Query: 460 acgatgaggtggccttcctcacccagggcgacgccaacgacgagaagaacgtgctctccc 519 |||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 720 acgacgaggtcgccttcctcacccagggcgacgccaacgacgagaagaacgtgctctcgc 779 Query: 520 tctggttcgagggcctcaagctgctcatcgtcaccgacg 558 |||||||||| ||||||||||| |||||||||||||||| Sbjct: 780 tctggttcgacggcctcaagctcctcatcgtcaccgacg 818
>ref|XM_507097.1| PREDICTED Oryza sativa (japonica cultivar-group), P0498H04.29 mRNA Length = 1422 Score = 585 bits (295), Expect = e-164 Identities = 463/519 (89%) Strand = Plus / Plus Query: 40 agtttggcgacgacgagttcggccacatgctggtggagatcctgaagcagaacggcgtca 99 ||||||| || || |||||||| |||||||||||||| ||||||||| ||||||| || | Sbjct: 300 agtttggtgatgatgagttcgggcacatgctggtggacatcctgaagaagaacggggtga 359 Query: 100 acgccgagggctgcctgttcgaccagcacgcgcgcacggccctggccttcgtcacgctca 159 |||| ||||| |||||||||||| |||||||||||||||| ||||| ||||| || | | Sbjct: 360 acgcggaggggtgcctgttcgacgagcacgcgcgcacggcgctggcgttcgtgaccttga 419 Query: 160 aggccaacggcgagcgcgagttcatgttctaccgcaacccgtcggccgacatgctgctca 219 | |||||||||||||||||||||||||||||| |||||| ||||||||||| || | Sbjct: 420 aaagcaacggcgagcgcgagttcatgttctaccggaacccgagcgccgacatgctcctga 479 Query: 220 cggaggccgagctcaacctggacctcatccgccgcgcccgcatcttccactacggctcca 279 ||||||| ||||||||||||||||| ||||| |||||| ||||||||||||||||||| Sbjct: 480 cggaggcggagctcaacctggacctgatccggcgcgccaagatcttccactacggctcca 539 Query: 280 tctcgctcatcaccgagccctgccgctcggcgcacgtcgccgccatgcgcgctgccaagt 339 |||| |||||||||||||| |||||||| || |||||||||||||||||||| ||||||| Sbjct: 540 tctccctcatcaccgagccgtgccgctccgcccacgtcgccgccatgcgcgccgccaagt 599 Query: 340 cggccggcatcctctgctcgtacgaccccaacgtgcgcctcccgctctggccctcggccc 399 ||||||||||||||||||| |||||||||||||| ||||||||||||||||| || | Sbjct: 600 cggccggcatcctctgctcctacgaccccaacgtccgcctcccgctctggccgtccgagg 659 Query: 400 aggccgcccgcgacggcgtcatgagcatctggaaggaggccgacttcatcaaggtgagcg 459 | |||||||||| |||| || | ||||||||||||||||||||||||||||||||||| Sbjct: 660 acgccgcccgcgccggcatcctctccatctggaaggaggccgacttcatcaaggtgagcg 719 Query: 460 acgatgaggtggccttcctcacccagggcgacgccaacgacgagaagaacgtgctctccc 519 |||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 720 acgacgaggtcgccttcctcacccagggcgacgccaacgacgagaagaacgtgctctcgc 779 Query: 520 tctggttcgagggcctcaagctgctcatcgtcaccgacg 558 |||||||||| ||||||||||| |||||||||||||||| Sbjct: 780 tctggttcgacggcctcaagctcctcatcgtcaccgacg 818
>dbj|AB110164.1| Oryza sativa (japonica cultivar-group) mRNA for fructokinase, complete cds, clone: 12FPB009 Length = 1239 Score = 585 bits (295), Expect = e-164 Identities = 463/519 (89%) Strand = Plus / Plus Query: 40 agtttggcgacgacgagttcggccacatgctggtggagatcctgaagcagaacggcgtca 99 ||||||| || || |||||||| |||||||||||||| ||||||||| ||||||| || | Sbjct: 223 agtttggtgatgatgagttcgggcacatgctggtggacatcctgaagaagaacggggtga 282 Query: 100 acgccgagggctgcctgttcgaccagcacgcgcgcacggccctggccttcgtcacgctca 159 |||| ||||| |||||||||||| |||||||||||||||| ||||| ||||| || | | Sbjct: 283 acgcggaggggtgcctgttcgacgagcacgcgcgcacggcgctggcgttcgtgaccttga 342 Query: 160 aggccaacggcgagcgcgagttcatgttctaccgcaacccgtcggccgacatgctgctca 219 | |||||||||||||||||||||||||||||| |||||| ||||||||||| || | Sbjct: 343 aaagcaacggcgagcgcgagttcatgttctaccggaacccgagcgccgacatgctcctga 402 Query: 220 cggaggccgagctcaacctggacctcatccgccgcgcccgcatcttccactacggctcca 279 ||||||| ||||||||||||||||| ||||| |||||| ||||||||||||||||||| Sbjct: 403 cggaggcggagctcaacctggacctgatccggcgcgccaagatcttccactacggctcca 462 Query: 280 tctcgctcatcaccgagccctgccgctcggcgcacgtcgccgccatgcgcgctgccaagt 339 |||| |||||||||||||| |||||||| || |||||||||||||||||||| ||||||| Sbjct: 463 tctccctcatcaccgagccgtgccgctccgcccacgtcgccgccatgcgcgccgccaagt 522 Query: 340 cggccggcatcctctgctcgtacgaccccaacgtgcgcctcccgctctggccctcggccc 399 ||||||||||||||||||| |||||||||||||| ||||||||||||||||| || | Sbjct: 523 cggccggcatcctctgctcctacgaccccaacgtccgcctcccgctctggccgtccgagg 582 Query: 400 aggccgcccgcgacggcgtcatgagcatctggaaggaggccgacttcatcaaggtgagcg 459 | |||||||||| |||| || | ||||||||||||||||||||||||||||||||||| Sbjct: 583 acgccgcccgcgccggcatcctctccatctggaaggaggccgacttcatcaaggtgagcg 642 Query: 460 acgatgaggtggccttcctcacccagggcgacgccaacgacgagaagaacgtgctctccc 519 |||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 643 acgacgaggtcgccttcctcacccagggcgacgccaacgacgagaagaacgtgctctcgc 702 Query: 520 tctggttcgagggcctcaagctgctcatcgtcaccgacg 558 |||||||||| ||||||||||| |||||||||||||||| Sbjct: 703 tctggttcgacggcctcaagctcctcatcgtcaccgacg 741
>gb|AF429947.1| Oryza sativa putative fructokinase II mRNA, complete cds Length = 1164 Score = 585 bits (295), Expect = e-164 Identities = 463/519 (89%) Strand = Plus / Plus Query: 40 agtttggcgacgacgagttcggccacatgctggtggagatcctgaagcagaacggcgtca 99 ||||||| || || |||||||| |||||||||||||| ||||||||| ||||||| || | Sbjct: 258 agtttggtgatgatgagttcgggcacatgctggtggacatcctgaagaagaacggggtga 317 Query: 100 acgccgagggctgcctgttcgaccagcacgcgcgcacggccctggccttcgtcacgctca 159 |||| ||||| |||||||||||| |||||||||||||||| ||||| ||||| || | | Sbjct: 318 acgcggaggggtgcctgttcgacgagcacgcgcgcacggcgctggcgttcgtgaccttga 377 Query: 160 aggccaacggcgagcgcgagttcatgttctaccgcaacccgtcggccgacatgctgctca 219 | |||||||||||||||||||||||||||||| |||||| ||||||||||| || | Sbjct: 378 aaagcaacggcgagcgcgagttcatgttctaccggaacccgagcgccgacatgctcctga 437 Query: 220 cggaggccgagctcaacctggacctcatccgccgcgcccgcatcttccactacggctcca 279 ||||||| ||||||||||||||||| ||||| |||||| ||||||||||||||||||| Sbjct: 438 cggaggcggagctcaacctggacctgatccggcgcgccaagatcttccactacggctcca 497 Query: 280 tctcgctcatcaccgagccctgccgctcggcgcacgtcgccgccatgcgcgctgccaagt 339 |||| |||||||||||||| |||||||| || |||||||||||||||||||| ||||||| Sbjct: 498 tctccctcatcaccgagccgtgccgctccgcccacgtcgccgccatgcgcgccgccaagt 557 Query: 340 cggccggcatcctctgctcgtacgaccccaacgtgcgcctcccgctctggccctcggccc 399 ||||||||||||||||||| |||||||||||||| ||||||||||||||||| || | Sbjct: 558 cggccggcatcctctgctcctacgaccccaacgtccgcctcccgctctggccgtccgagg 617 Query: 400 aggccgcccgcgacggcgtcatgagcatctggaaggaggccgacttcatcaaggtgagcg 459 | |||||||||| |||| || | ||||||||||||||||||||||||||||||||||| Sbjct: 618 acgccgcccgcgccggcatcctctccatctggaaggaggccgacttcatcaaggtgagcg 677 Query: 460 acgatgaggtggccttcctcacccagggcgacgccaacgacgagaagaacgtgctctccc 519 |||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 678 acgacgaggtcgccttcctcacccagggcgacgccaacgacgagaagaacgtgctctcgc 737 Query: 520 tctggttcgagggcctcaagctgctcatcgtcaccgacg 558 |||||||||| ||||||||||| |||||||||||||||| Sbjct: 738 tctggttcgacggcctcaagctcctcatcgtcaccgacg 776
>dbj|AK099353.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033041J08, full insert sequence Length = 1315 Score = 585 bits (295), Expect = e-164 Identities = 463/519 (89%) Strand = Plus / Plus Query: 40 agtttggcgacgacgagttcggccacatgctggtggagatcctgaagcagaacggcgtca 99 ||||||| || || |||||||| |||||||||||||| ||||||||| ||||||| || | Sbjct: 300 agtttggtgatgatgagttcgggcacatgctggtggacatcctgaagaagaacggggtga 359 Query: 100 acgccgagggctgcctgttcgaccagcacgcgcgcacggccctggccttcgtcacgctca 159 |||| ||||| |||||||||||| |||||||||||||||| ||||| ||||| || | | Sbjct: 360 acgcggaggggtgcctgttcgacgagcacgcgcgcacggcgctggcgttcgtgaccttga 419 Query: 160 aggccaacggcgagcgcgagttcatgttctaccgcaacccgtcggccgacatgctgctca 219 | |||||||||||||||||||||||||||||| |||||| ||||||||||| || | Sbjct: 420 aaagcaacggcgagcgcgagttcatgttctaccggaacccgagcgccgacatgctcctga 479 Query: 220 cggaggccgagctcaacctggacctcatccgccgcgcccgcatcttccactacggctcca 279 ||||||| ||||||||||||||||| ||||| |||||| ||||||||||||||||||| Sbjct: 480 cggaggcggagctcaacctggacctgatccggcgcgccaagatcttccactacggctcca 539 Query: 280 tctcgctcatcaccgagccctgccgctcggcgcacgtcgccgccatgcgcgctgccaagt 339 |||| |||||||||||||| |||||||| || |||||||||||||||||||| ||||||| Sbjct: 540 tctccctcatcaccgagccgtgccgctccgcccacgtcgccgccatgcgcgccgccaagt 599 Query: 340 cggccggcatcctctgctcgtacgaccccaacgtgcgcctcccgctctggccctcggccc 399 ||||||||||||||||||| |||||||||||||| ||||||||||||||||| || | Sbjct: 600 cggccggcatcctctgctcctacgaccccaacgtccgcctcccgctctggccgtccgagg 659 Query: 400 aggccgcccgcgacggcgtcatgagcatctggaaggaggccgacttcatcaaggtgagcg 459 | |||||||||| |||| || | ||||||||||||||||||||||||||||||||||| Sbjct: 660 acgccgcccgcgccggcatcctctccatctggaaggaggccgacttcatcaaggtgagcg 719 Query: 460 acgatgaggtggccttcctcacccagggcgacgccaacgacgagaagaacgtgctctccc 519 |||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 720 acgacgaggtcgccttcctcacccagggcgacgccaacgacgagaagaacgtgctctcgc 779 Query: 520 tctggttcgagggcctcaagctgctcatcgtcaccgacg 558 |||||||||| ||||||||||| |||||||||||||||| Sbjct: 780 tctggttcgacggcctcaagctcctcatcgtcaccgacg 818
>dbj|AK070120.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023041C07, full insert sequence Length = 1422 Score = 585 bits (295), Expect = e-164 Identities = 463/519 (89%) Strand = Plus / Plus Query: 40 agtttggcgacgacgagttcggccacatgctggtggagatcctgaagcagaacggcgtca 99 ||||||| || || |||||||| |||||||||||||| ||||||||| ||||||| || | Sbjct: 300 agtttggtgatgatgagttcgggcacatgctggtggacatcctgaagaagaacggggtga 359 Query: 100 acgccgagggctgcctgttcgaccagcacgcgcgcacggccctggccttcgtcacgctca 159 |||| ||||| |||||||||||| |||||||||||||||| ||||| ||||| || | | Sbjct: 360 acgcggaggggtgcctgttcgacgagcacgcgcgcacggcgctggcgttcgtgaccttga 419 Query: 160 aggccaacggcgagcgcgagttcatgttctaccgcaacccgtcggccgacatgctgctca 219 | |||||||||||||||||||||||||||||| |||||| ||||||||||| || | Sbjct: 420 aaagcaacggcgagcgcgagttcatgttctaccggaacccgagcgccgacatgctcctga 479 Query: 220 cggaggccgagctcaacctggacctcatccgccgcgcccgcatcttccactacggctcca 279 ||||||| ||||||||||||||||| ||||| |||||| ||||||||||||||||||| Sbjct: 480 cggaggcggagctcaacctggacctgatccggcgcgccaagatcttccactacggctcca 539 Query: 280 tctcgctcatcaccgagccctgccgctcggcgcacgtcgccgccatgcgcgctgccaagt 339 |||| |||||||||||||| |||||||| || |||||||||||||||||||| ||||||| Sbjct: 540 tctccctcatcaccgagccgtgccgctccgcccacgtcgccgccatgcgcgccgccaagt 599 Query: 340 cggccggcatcctctgctcgtacgaccccaacgtgcgcctcccgctctggccctcggccc 399 ||||||||||||||||||| |||||||||||||| ||||||||||||||||| || | Sbjct: 600 cggccggcatcctctgctcctacgaccccaacgtccgcctcccgctctggccgtccgagg 659 Query: 400 aggccgcccgcgacggcgtcatgagcatctggaaggaggccgacttcatcaaggtgagcg 459 | |||||||||| |||| || | ||||||||||||||||||||||||||||||||||| Sbjct: 660 acgccgcccgcgccggcatcctctccatctggaaggaggccgacttcatcaaggtgagcg 719 Query: 460 acgatgaggtggccttcctcacccagggcgacgccaacgacgagaagaacgtgctctccc 519 |||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 720 acgacgaggtcgccttcctcacccagggcgacgccaacgacgagaagaacgtgctctcgc 779 Query: 520 tctggttcgagggcctcaagctgctcatcgtcaccgacg 558 |||||||||| ||||||||||| |||||||||||||||| Sbjct: 780 tctggttcgacggcctcaagctcctcatcgtcaccgacg 818
>dbj|AK061391.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-305-C10, full insert sequence Length = 1165 Score = 585 bits (295), Expect = e-164 Identities = 463/519 (89%) Strand = Plus / Plus Query: 40 agtttggcgacgacgagttcggccacatgctggtggagatcctgaagcagaacggcgtca 99 ||||||| || || |||||||| |||||||||||||| ||||||||| ||||||| || | Sbjct: 31 agtttggtgatgatgagttcgggcacatgctggtggacatcctgaagaagaacggggtga 90 Query: 100 acgccgagggctgcctgttcgaccagcacgcgcgcacggccctggccttcgtcacgctca 159 |||| ||||| |||||||||||| |||||||||||||||| ||||| ||||| || | | Sbjct: 91 acgcggaggggtgcctgttcgacgagcacgcgcgcacggcgctggcgttcgtgaccttga 150 Query: 160 aggccaacggcgagcgcgagttcatgttctaccgcaacccgtcggccgacatgctgctca 219 | |||||||||||||||||||||||||||||| |||||| ||||||||||| || | Sbjct: 151 aaagcaacggcgagcgcgagttcatgttctaccggaacccgagcgccgacatgctcctga 210 Query: 220 cggaggccgagctcaacctggacctcatccgccgcgcccgcatcttccactacggctcca 279 ||||||| ||||||||||||||||| ||||| |||||| ||||||||||||||||||| Sbjct: 211 cggaggcggagctcaacctggacctgatccggcgcgccaagatcttccactacggctcca 270 Query: 280 tctcgctcatcaccgagccctgccgctcggcgcacgtcgccgccatgcgcgctgccaagt 339 |||| |||||||||||||| |||||||| || |||||||||||||||||||| ||||||| Sbjct: 271 tctccctcatcaccgagccgtgccgctccgcccacgtcgccgccatgcgcgccgccaagt 330 Query: 340 cggccggcatcctctgctcgtacgaccccaacgtgcgcctcccgctctggccctcggccc 399 ||||||||||||||||||| |||||||||||||| ||||||||||||||||| || | Sbjct: 331 cggccggcatcctctgctcctacgaccccaacgtccgcctcccgctctggccgtccgagg 390 Query: 400 aggccgcccgcgacggcgtcatgagcatctggaaggaggccgacttcatcaaggtgagcg 459 | |||||||||| |||| || | ||||||||||||||||||||||||||||||||||| Sbjct: 391 acgccgcccgcgccggcatcctctccatctggaaggaggccgacttcatcaaggtgagcg 450 Query: 460 acgatgaggtggccttcctcacccagggcgacgccaacgacgagaagaacgtgctctccc 519 |||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 451 acgacgaggtcgccttcctcacccagggcgacgccaacgacgagaagaacgtgctctcgc 510 Query: 520 tctggttcgagggcctcaagctgctcatcgtcaccgacg 558 |||||||||| ||||||||||| |||||||||||||||| Sbjct: 511 tctggttcgacggcctcaagctcctcatcgtcaccgacg 549
>gb|AY197773.1| Zea mays fructokinase 2 (frk2) mRNA, complete cds Length = 1358 Score = 482 bits (243), Expect = e-133 Identities = 450/519 (86%) Strand = Plus / Plus Query: 40 agtttggcgacgacgagttcggccacatgctggtggagatcctgaagcagaacggcgtca 99 |||| ||||||||||||||||| |||||||||||| | ||||||||||||||| ||| | Sbjct: 320 agttcggcgacgacgagttcgggcacatgctggtgaacatcctgaagcagaacaacgtga 379 Query: 100 acgccgagggctgcctgttcgaccagcacgcgcgcacggccctggccttcgtcacgctca 159 |||| ||||| |||||||||||| |||||||||| ||||| ||||||||||| ||||||| Sbjct: 380 acgcggaggggtgcctgttcgacaagcacgcgcggacggcgctggccttcgtgacgctca 439 Query: 160 aggccaacggcgagcgcgagttcatgttctaccgcaacccgtcggccgacatgctgctca 219 || | |||| ||||||||||||||||| ||| | |||||| || ||||||||||| | Sbjct: 440 agcacgacggggagcgcgagttcatgttttacaggaacccgagcgcggacatgctgctga 499 Query: 220 cggaggccgagctcaacctggacctcatccgccgcgcccgcatcttccactacggctcca 279 ||||||| ||||| |||||| ||| | || |||||| | | |||||||||||||||| Sbjct: 500 cggaggcggagctggacctgggcctggtgcggcgcgccagggtgttccactacggctcca 559 Query: 280 tctcgctcatcaccgagccctgccgctcggcgcacgtcgccgccatgcgcgctgccaagt 339 ||||||||||| ||||||| ||||||||||||||| | |||||||||||||| |||||| Sbjct: 560 tctcgctcatctccgagccgtgccgctcggcgcacatggccgccatgcgcgcagccaagg 619 Query: 340 cggccggcatcctctgctcgtacgaccccaacgtgcgcctcccgctctggccctcggccc 399 | || ||| | |||||||| |||||||||||||||||||||||||||||||| ||| || Sbjct: 620 ccgcgggcgtgctctgctcctacgaccccaacgtgcgcctcccgctctggccgtcgcccg 679 Query: 400 aggccgcccgcgacggcgtcatgagcatctggaaggaggccgacttcatcaaggtgagcg 459 | ||||| ||||| ||| || | |||||||||||||||||||||||||||||||| |||| Sbjct: 680 acgccgcacgcgagggcatcctcagcatctggaaggaggccgacttcatcaaggtcagcg 739 Query: 460 acgatgaggtggccttcctcacccagggcgacgccaacgacgagaagaacgtgctctccc 519 |||| ||||||||||||||||| | || |||||||||||||||||||||||||| |||| Sbjct: 740 acgacgaggtggccttcctcacgcgcggggacgccaacgacgagaagaacgtgctgtccc 799 Query: 520 tctggttcgagggcctcaagctgctcatcgtcaccgacg 558 | ||||| || || |||||||||||| |||||||||||| Sbjct: 800 tgtggtttgacgggctcaagctgctcgtcgtcaccgacg 838
>gb|BT016757.1| Zea mays clone Contig590 mRNA sequence Length = 898 Score = 474 bits (239), Expect = e-130 Identities = 449/519 (86%) Strand = Plus / Plus Query: 40 agtttggcgacgacgagttcggccacatgctggtggagatcctgaagcagaacggcgtca 99 |||| ||||||||||||||||| |||||| ||||| | ||||||||||||||| ||| | Sbjct: 330 agttcggcgacgacgagttcgggcacatgttggtgaacatcctgaagcagaacaacgtga 389 Query: 100 acgccgagggctgcctgttcgaccagcacgcgcgcacggccctggccttcgtcacgctca 159 |||| ||||| |||||||||||| |||||||||| ||||| ||||||||||| || |||| Sbjct: 390 acgcggaggggtgcctgttcgacaagcacgcgcggacggcgctggccttcgtgaccctca 449 Query: 160 aggccaacggcgagcgcgagttcatgttctaccgcaacccgtcggccgacatgctgctca 219 || | |||| ||||||||||||||||||||| | |||||| || ||||||||||| | Sbjct: 450 agcacgacggggagcgcgagttcatgttctacaggaacccgagcgcggacatgctgctga 509 Query: 220 cggaggccgagctcaacctggacctcatccgccgcgcccgcatcttccactacggctcca 279 ||||||| ||||| |||||| ||| | || |||||| | | |||||||||||||||| Sbjct: 510 cggaggcggagcttgacctgggcctggtgcggcgcgccagggtgttccactacggctcca 569 Query: 280 tctcgctcatcaccgagccctgccgctcggcgcacgtcgccgccatgcgcgctgccaagt 339 ||||||||||| ||||||| ||||||||||||||| | |||||||||||||| |||||| Sbjct: 570 tctcgctcatctccgagccgtgccgctcggcgcacatggccgccatgcgcgcagccaagg 629 Query: 340 cggccggcatcctctgctcgtacgaccccaacgtgcgcctcccgctctggccctcggccc 399 | || ||| | |||||||| |||||||||||||||||||||||||||||||| ||| || Sbjct: 630 ccgcgggcgtgctctgctcctacgaccccaacgtgcgcctcccgctctggccgtcgcccg 689 Query: 400 aggccgcccgcgacggcgtcatgagcatctggaaggaggccgacttcatcaaggtgagcg 459 | ||||| ||||| ||| || | |||||||||||||||||||||||||||||||| |||| Sbjct: 690 acgccgcacgcgagggcatcctcagcatctggaaggaggccgacttcatcaaggtcagcg 749 Query: 460 acgatgaggtggccttcctcacccagggcgacgccaacgacgagaagaacgtgctctccc 519 |||| ||||||||||||||||| | || |||||||||||||||||||||||||| |||| Sbjct: 750 acgacgaggtggccttcctcacgcgcggggacgccaacgacgagaagaacgtgctgtccc 809 Query: 520 tctggttcgagggcctcaagctgctcatcgtcaccgacg 558 | ||||| || || |||||||||||| |||||||||||| Sbjct: 810 tgtggtttgacgggctcaagctgctcgtcgtcaccgacg 848
>gb|AY112523.1| Zea mays CL966_1 mRNA sequence Length = 1528 Score = 466 bits (235), Expect = e-128 Identities = 448/519 (86%) Strand = Plus / Plus Query: 40 agtttggcgacgacgagttcggccacatgctggtggagatcctgaagcagaacggcgtca 99 |||| ||||||||||||||||| |||||| ||||| | ||||||||||||||| ||| | Sbjct: 322 agttcggcgacgacgagttcgggcacatgttggtgaacatcctgaagcagaacaacgtga 381 Query: 100 acgccgagggctgcctgttcgaccagcacgcgcgcacggccctggccttcgtcacgctca 159 || | ||||| |||||||||||| |||||||||| ||||| ||||||||||| ||||||| Sbjct: 382 actcggaggggtgcctgttcgacaagcacgcgcggacggcgctggccttcgtgacgctca 441 Query: 160 aggccaacggcgagcgcgagttcatgttctaccgcaacccgtcggccgacatgctgctca 219 || | |||| ||||||||||||||||||||| | |||||| || ||||||||||| | Sbjct: 442 agcacgacggggagcgcgagttcatgttctacaggaacccgagcgcggacatgctgctga 501 Query: 220 cggaggccgagctcaacctggacctcatccgccgcgcccgcatcttccactacggctcca 279 ||||||| ||||| |||||| ||| | || |||||| | |||||||||||||||| Sbjct: 502 cggaggcggagctggacctgggcctggtgcggcgcgccaaggtgttccactacggctcca 561 Query: 280 tctcgctcatcaccgagccctgccgctcggcgcacgtcgccgccatgcgcgctgccaagt 339 ||||||||||| ||||||| ||||||||||||||| | |||||||||||||| |||||| Sbjct: 562 tctcgctcatctccgagccgtgccgctcggcgcacatggccgccatgcgcgcagccaagg 621 Query: 340 cggccggcatcctctgctcgtacgaccccaacgtgcgcctcccgctctggccctcggccc 399 | || ||| | |||||||| |||||||||||||||||||||||||||||||| ||| || Sbjct: 622 ccgcgggcgtgctctgctcctacgaccccaacgtgcgcctcccgctctggccgtcgcccg 681 Query: 400 aggccgcccgcgacggcgtcatgagcatctggaaggaggccgacttcatcaaggtgagcg 459 | ||||| ||||| ||| || | |||||||||||||||||||||||||||||||| |||| Sbjct: 682 acgccgcacgcgagggcatcctcagcatctggaaggaggccgacttcatcaaggtcagcg 741 Query: 460 acgatgaggtggccttcctcacccagggcgacgccaacgacgagaagaacgtgctctccc 519 |||| ||||||||||||||||| | || |||||||||||||||||||||||||| |||| Sbjct: 742 acgacgaggtggccttcctcacgcgcggggacgccaacgacgagaagaacgtgctgtccc 801 Query: 520 tctggttcgagggcctcaagctgctcatcgtcaccgacg 558 | ||||| || || |||||||||||| |||||||||||| Sbjct: 802 tgtggtttgacgggctcaagctgctcgtcgtcaccgacg 840
>gb|BT016469.1| Zea mays clone Contig302 mRNA sequence Length = 1305 Score = 331 bits (167), Expect = 1e-87 Identities = 263/295 (89%) Strand = Plus / Minus Query: 264 ttccactacggctccatctcgctcatcaccgagccctgccgctcggcgcacgtcgccgcc 323 ||||||||||||||||||||||||||| ||||||| ||||||||||||||| | |||||| Sbjct: 1005 ttccactacggctccatctcgctcatctccgagccgtgccgctcggcgcacatggccgcc 946 Query: 324 atgcgcgctgccaagtcggccggcatcctctgctcgtacgaccccaacgtgcgcctcccg 383 |||||||| |||||| | || ||| | |||||||| |||||||||||||||||||||||| Sbjct: 945 atgcgcgcagccaaggccgcgggcgtgctctgctcctacgaccccaacgtgcgcctcccg 886 Query: 384 ctctggccctcggcccaggccgcccgcgacggcgtcatgagcatctggaaggaggccgac 443 |||||||| ||| || | ||||| ||||| ||| || | ||||||||||||||||||||| Sbjct: 885 ctctggccgtcgcccgacgccgcacgcgagggcatcctcagcatctggaaggaggccgac 826 Query: 444 ttcatcaaggtgagcgacgatgaggtggccttcctcacccagggcgacgccaacgacgag 503 ||||||||||| |||||||| ||||||||||||||||| | || ||||||||||||||| Sbjct: 825 ttcatcaaggtcagcgacgacgaggtggccttcctcacgcgcggggacgccaacgacgag 766 Query: 504 aagaacgtgctctccctctggttcgagggcctcaagctgctcatcgtcaccgacg 558 ||||||||||| ||||| ||||| || || |||||||||||| |||||||||||| Sbjct: 765 aagaacgtgctgtccctgtggtttgacgggctcaagctgctcgtcgtcaccgacg 711
>gb|AF457962.1| Zea mays clone csi1n.pk0029.c8, mRNA sequence Length = 543 Score = 331 bits (167), Expect = 1e-87 Identities = 263/295 (89%) Strand = Plus / Plus Query: 264 ttccactacggctccatctcgctcatcaccgagccctgccgctcggcgcacgtcgccgcc 323 ||||||||||||||||||||||||||| ||||||| ||||||||||||||| | |||||| Sbjct: 31 ttccactacggctccatctcgctcatctccgagccgtgccgctcggcgcacatggccgcc 90 Query: 324 atgcgcgctgccaagtcggccggcatcctctgctcgtacgaccccaacgtgcgcctcccg 383 |||||||| |||||| | || ||| | |||||||| |||||||||||||||||||||||| Sbjct: 91 atgcgcgcagccaaggccgcgggcgtgctctgctcctacgaccccaacgtgcgcctcccg 150 Query: 384 ctctggccctcggcccaggccgcccgcgacggcgtcatgagcatctggaaggaggccgac 443 |||||||| ||| || | ||||| ||||| ||| || | ||||||||||||||||||||| Sbjct: 151 ctctggccgtcgcccgacgccgcacgcgagggcatcctcagcatctggaaggaggccgac 210 Query: 444 ttcatcaaggtgagcgacgatgaggtggccttcctcacccagggcgacgccaacgacgag 503 ||||||||||| |||||||| ||||||||||||||||| | || ||||||||||||||| Sbjct: 211 ttcatcaaggtcagcgacgacgaggtggccttcctcacgcgcggggacgccaacgacgag 270 Query: 504 aagaacgtgctctccctctggttcgagggcctcaagctgctcatcgtcaccgacg 558 ||||||||||| ||||| ||||| || || |||||||||||| |||||||||||| Sbjct: 271 aagaacgtgctgtccctgtggtttgacgggctcaagctgctcgtcgtcaccgacg 325
>ref|NM_190249.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 972 Score = 79.8 bits (40), Expect = 9e-12 Identities = 91/108 (84%) Strand = Plus / Plus Query: 129 gcgcgcacggccctggccttcgtcacgctcaaggccaacggcgagcgcgagttcatgttc 188 |||||||| || || ||||||||||| ||| ||| |||| |||||||||||||||||| Sbjct: 268 gcgcgcaccgcgctcgccttcgtcaccctccgcgccgacggggagcgcgagttcatgttc 327 Query: 189 taccgcaacccgtcggccgacatgctgctcacggaggccgagctcaac 236 ||||||||||| ||||||||||| ||||| | |||||||||||| Sbjct: 328 taccgcaaccccagcgccgacatgctcctcacccacgccgagctcaac 375
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 79.8 bits (40), Expect = 9e-12 Identities = 91/108 (84%) Strand = Plus / Minus Query: 129 gcgcgcacggccctggccttcgtcacgctcaaggccaacggcgagcgcgagttcatgttc 188 |||||||| || || ||||||||||| ||| ||| |||| |||||||||||||||||| Sbjct: 38880491 gcgcgcaccgcgctcgccttcgtcaccctccgcgccgacggggagcgcgagttcatgttc 38880432 Query: 189 taccgcaacccgtcggccgacatgctgctcacggaggccgagctcaac 236 ||||||||||| ||||||||||| ||||| | |||||||||||| Sbjct: 38880431 taccgcaaccccagcgccgacatgctcctcacccacgccgagctcaac 38880384 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 430 ggaaggaggccgacttcatc 449 |||||||||||||||||||| Sbjct: 21338714 ggaaggaggccgacttcatc 21338695
>dbj|AP003407.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1078G07 Length = 199457 Score = 79.8 bits (40), Expect = 9e-12 Identities = 91/108 (84%) Strand = Plus / Minus Query: 129 gcgcgcacggccctggccttcgtcacgctcaaggccaacggcgagcgcgagttcatgttc 188 |||||||| || || ||||||||||| ||| ||| |||| |||||||||||||||||| Sbjct: 153373 gcgcgcaccgcgctcgccttcgtcaccctccgcgccgacggggagcgcgagttcatgttc 153314 Query: 189 taccgcaacccgtcggccgacatgctgctcacggaggccgagctcaac 236 ||||||||||| ||||||||||| ||||| | |||||||||||| Sbjct: 153313 taccgcaaccccagcgccgacatgctcctcacccacgccgagctcaac 153266
>gb|AF429948.1| Oryza sativa putative fructokinase I mRNA, complete cds Length = 1135 Score = 79.8 bits (40), Expect = 9e-12 Identities = 91/108 (84%) Strand = Plus / Plus Query: 129 gcgcgcacggccctggccttcgtcacgctcaaggccaacggcgagcgcgagttcatgttc 188 |||||||| || || ||||||||||| ||| ||| |||| |||||||||||||||||| Sbjct: 329 gcgcgcaccgcgctcgccttcgtcaccctccgcgccgacggggagcgcgagttcatgttc 388 Query: 189 taccgcaacccgtcggccgacatgctgctcacggaggccgagctcaac 236 ||||||||||| ||||||||||| ||||| | |||||||||||| Sbjct: 389 taccgcaaccccagcgccgacatgctcctcacccacgccgagctcaac 436
>dbj|AP003316.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0696G06 Length = 142571 Score = 79.8 bits (40), Expect = 9e-12 Identities = 91/108 (84%) Strand = Plus / Minus Query: 129 gcgcgcacggccctggccttcgtcacgctcaaggccaacggcgagcgcgagttcatgttc 188 |||||||| || || ||||||||||| ||| ||| |||| |||||||||||||||||| Sbjct: 45277 gcgcgcaccgcgctcgccttcgtcaccctccgcgccgacggggagcgcgagttcatgttc 45218 Query: 189 taccgcaacccgtcggccgacatgctgctcacggaggccgagctcaac 236 ||||||||||| ||||||||||| ||||| | |||||||||||| Sbjct: 45217 taccgcaaccccagcgccgacatgctcctcacccacgccgagctcaac 45170
>dbj|AK060500.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-017-F08, full insert sequence Length = 1380 Score = 79.8 bits (40), Expect = 9e-12 Identities = 91/108 (84%) Strand = Plus / Plus Query: 129 gcgcgcacggccctggccttcgtcacgctcaaggccaacggcgagcgcgagttcatgttc 188 |||||||| || || ||||||||||| ||| ||| |||| |||||||||||||||||| Sbjct: 490 gcgcgcaccgcgctcgccttcgtcaccctccgcgccgacggggagcgcgagttcatgttc 549 Query: 189 taccgcaacccgtcggccgacatgctgctcacggaggccgagctcaac 236 ||||||||||| ||||||||||| ||||| | |||||||||||| Sbjct: 550 taccgcaaccccagcgccgacatgctcctcacccacgccgagctcaac 597
>gb|AY104222.1| Zea mays PCO070293 mRNA sequence Length = 1331 Score = 73.8 bits (37), Expect = 5e-10 Identities = 79/93 (84%) Strand = Plus / Plus Query: 128 cgcgcgcacggccctggccttcgtcacgctcaaggccaacggcgagcgcgagttcatgtt 187 ||||||||| || || ||||||||||| || ||| |||||||||||||||||||||| Sbjct: 373 cgcgcgcaccgcgcttgccttcgtcaccctgcgcgccgacggcgagcgcgagttcatgtt 432 Query: 188 ctaccgcaacccgtcggccgacatgctgctcac 220 |||||||||||| ||||||||||| ||||| Sbjct: 433 ctaccgcaaccccagcgccgacatgctcctcac 465 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 45 ggcgacgacgagttcggccacatgct 70 ||||||||||||||||||| |||||| Sbjct: 290 ggcgacgacgagttcggccgcatgct 315
>dbj|AK120887.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023029D05, full insert sequence Length = 1216 Score = 69.9 bits (35), Expect = 8e-09 Identities = 62/71 (87%) Strand = Plus / Plus Query: 166 acggcgagcgcgagttcatgttctaccgcaacccgtcggccgacatgctgctcacggagg 225 |||| ||||||||||||||||||||||||||||| ||||||||||| ||||| | | Sbjct: 171 acggggagcgcgagttcatgttctaccgcaaccccagcgccgacatgctcctcacccacg 230 Query: 226 ccgagctcaac 236 ||||||||||| Sbjct: 231 ccgagctcaac 241
>gb|AY197772.1| Zea mays fructokinase 1 (frk1) mRNA, complete cds Length = 1262 Score = 63.9 bits (32), Expect = 5e-07 Identities = 62/72 (86%) Strand = Plus / Plus Query: 128 cgcgcgcacggccctggccttcgtcacgctcaaggccaacggcgagcgcgagttcatgtt 187 ||||||||| || || ||||||||||| || ||| |||| ||||||||||||||||| Sbjct: 285 cgcgcgcaccgcgctcgccttcgtcaccctgcgcgccgacggggagcgcgagttcatgtt 344 Query: 188 ctaccgcaaccc 199 |||||||||||| Sbjct: 345 ctaccgcaaccc 356 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 45 ggcgacgacgagttcggccacatgct 70 ||||||||||||||||||| |||||| Sbjct: 202 ggcgacgacgagttcggccgcatgct 227
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome Length = 3696649 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 129 gcgcgcacggccctggccttcgtcacgctcaaggccaacggcgagcg 175 |||||||||||||||||||||||| ||| | | ||| |||||||||| Sbjct: 1045039 gcgcgcacggccctggccttcgtctcgcgcgatgcccacggcgagcg 1044993
>gb|AF530593.1| Petunia integrifolia subsp. inflata putative fructokinase 2 (S2-3.16) gene, complete cds Length = 8232 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 45 ggcgacgacgagttcggccacatgct 70 |||||||| ||||||||||||||||| Sbjct: 1839 ggcgacgatgagttcggccacatgct 1864
>gb|AF530592.1| Petunia integrifolia subsp. inflata putative fructokinase 2 (S1-3.16) gene, complete cds Length = 9183 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 45 ggcgacgacgagttcggccacatgct 70 |||||||| ||||||||||||||||| Sbjct: 1844 ggcgacgatgagttcggccacatgct 1869
>dbj|AB083684.1| Nicotiana tabacum NtFrk mRNA for fructokinase, partial cds Length = 507 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 45 ggcgacgacgagttcggccacatgct 70 |||||||| ||||||||||||||||| Sbjct: 169 ggcgacgatgagttcggccacatgct 194
>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome Length = 5650368 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 69 ctggtggagatcctgaagcag 89 ||||||||||||||||||||| Sbjct: 5142684 ctggtggagatcctgaagcag 5142664
>emb|AL939132.1|SCO939132 Streptomyces coelicolor A3(2) complete genome; segment 29/29 Length = 302007 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 45 ggcgacgacgagttcggccac 65 ||||||||||||||||||||| Sbjct: 129527 ggcgacgacgagttcggccac 129547
>emb|AJ579894.1|PSP579894 Pseudomonas sp. Y2 paa2 gene cluster for phenylacetate degradation Length = 21562 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 454 tgagcgacgatgaggtggcct 474 ||||||||||||||||||||| Sbjct: 2491 tgagcgacgatgaggtggcct 2471
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 311 gcacgtcgccgccatgcgcgc 331 ||||||||||||||||||||| Sbjct: 77085 gcacgtcgccgccatgcgcgc 77105
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 310 cgcacgtcgccgccatgcgcg 330 ||||||||||||||||||||| Sbjct: 2103551 cgcacgtcgccgccatgcgcg 2103531 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 312 cacgtcgccgccatgcgcgctgcc 335 ||||||||||| |||||||||||| Sbjct: 1414938 cacgtcgccgcgatgcgcgctgcc 1414961
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 85 agcagaacggcgtcaacgccg 105 ||||||||||||||||||||| Sbjct: 4236016 agcagaacggcgtcaacgccg 4236036
>ref|NM_196191.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0032N04.22), mRNA Length = 2097 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 242 cctcatccgccgcgcccgca 261 |||||||||||||||||||| Sbjct: 237 cctcatccgccgcgcccgca 256
>ref|NM_193526.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1575 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 430 ggaaggaggccgacttcatc 449 |||||||||||||||||||| Sbjct: 1349 ggaaggaggccgacttcatc 1368
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 131 gcgcacggccctggccttcg 150 |||||||||||||||||||| Sbjct: 2265619 gcgcacggccctggccttcg 2265600
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 cggcgtcaacgccgagggct 111 |||||||||||||||||||| Sbjct: 3477811 cggcgtcaacgccgagggct 3477830 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 92 cggcgtcaacgccgagggct 111 |||||||||||||||||||| Sbjct: 3377796 cggcgtcaacgccgagggct 3377777 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 cggcgtcaacgccgagggct 111 |||||||||||||||||||| Sbjct: 2978420 cggcgtcaacgccgagggct 2978439 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 92 cggcgtcaacgccgagggct 111 |||||||||||||||||||| Sbjct: 2824728 cggcgtcaacgccgagggct 2824709 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 92 cggcgtcaacgccgagggct 111 |||||||||||||||||||| Sbjct: 1341529 cggcgtcaacgccgagggct 1341510 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 cggcgtcaacgccgagggct 111 |||||||||||||||||||| Sbjct: 1170032 cggcgtcaacgccgagggct 1170051 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 330 gctgccaagtcggccggcatcctctgct 357 |||||||||||||||| |||| |||||| Sbjct: 930868 gctgccaagtcggccgtcatcgtctgct 930895
>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome Length = 6093698 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 311 gcacgtcgccgccatgcgcg 330 |||||||||||||||||||| Sbjct: 293734 gcacgtcgccgccatgcgcg 293715
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome Length = 3928089 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 187 tctaccgcaacccgtcggcc 206 |||||||||||||||||||| Sbjct: 2887491 tctaccgcaacccgtcggcc 2887510
>emb|BX248343.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 10/14 Length = 307550 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 cggcgtcaacgccgagggct 111 |||||||||||||||||||| Sbjct: 122613 cggcgtcaacgccgagggct 122632
>gb|AC125352.4| Mus musculus BAC clone RP23-451M13 from chromosome 8, complete sequence Length = 203416 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 73 tggagatcctgaagcagaac 92 |||||||||||||||||||| Sbjct: 98441 tggagatcctgaagcagaac 98422
>gb|AC108416.5| Mus musculus chromosome 14, clone RP23-114J12, complete sequence Length = 227555 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 417 gtcatgagcatctggaagga 436 |||||||||||||||||||| Sbjct: 123752 gtcatgagcatctggaagga 123771
>emb|AL590009.10| Human DNA sequence from clone RP11-181P4 on chromosome 6 Contains the WASF1 gene for WAS protein family member 1 and part of the FLJ31482 gene, complete sequence Length = 153046 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 528 gagggcctcaagctgctcat 547 |||||||||||||||||||| Sbjct: 5453 gagggcctcaagctgctcat 5434
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence Length = 4895836 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 313 acgtcgccgccatgcgcgctgcca 336 ||||||||||||||||||| |||| Sbjct: 2174585 acgtcgccgccatgcgcgcggcca 2174562
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 397 cccaggccgcccgcgacggc 416 |||||||||||||||||||| Sbjct: 3513813 cccaggccgcccgcgacggc 3513794
>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence Length = 2726152 Score = 40.1 bits (20), Expect = 7.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 102 gccgagggctgcctgttcgaccagcacgcgcg 133 ||||||||| ||||||| ||||||||||||| Sbjct: 2672420 gccgagggccacctgttccaccagcacgcgcg 2672389
>emb|BX842582.1| Mycobacterium tuberculosis H37Rv complete genome; segment 11/13 Length = 349563 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 cggcgtcaacgccgagggct 111 |||||||||||||||||||| Sbjct: 14351 cggcgtcaacgccgagggct 14370
>emb|BX842581.1| Mycobacterium tuberculosis H37Rv complete genome; segment 10/13 Length = 348676 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 92 cggcgtcaacgccgagggct 111 |||||||||||||||||||| Sbjct: 263022 cggcgtcaacgccgagggct 263003
>emb|BX842580.1| Mycobacterium tuberculosis H37Rv complete genome; segment 9/13 Length = 346051 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 cggcgtcaacgccgagggct 111 |||||||||||||||||||| Sbjct: 210598 cggcgtcaacgccgagggct 210617 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 92 cggcgtcaacgccgagggct 111 |||||||||||||||||||| Sbjct: 56204 cggcgtcaacgccgagggct 56185
>emb|BX842575.1| Mycobacterium tuberculosis H37Rv complete genome; segment 4/13 Length = 349306 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 92 cggcgtcaacgccgagggct 111 |||||||||||||||||||| Sbjct: 308255 cggcgtcaacgccgagggct 308236 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 cggcgtcaacgccgagggct 111 |||||||||||||||||||| Sbjct: 136199 cggcgtcaacgccgagggct 136218
>emb|BX842574.1| Mycobacterium tuberculosis H37Rv complete genome; segment 3/13 Length = 349564 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 330 gctgccaagtcggccggcatcctctgct 357 |||||||||||||||| |||| |||||| Sbjct: 246695 gctgccaagtcggccgtcatcgtctgct 246722
>emb|BX248344.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 11/14 Length = 318050 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 cggcgtcaacgccgagggct 111 |||||||||||||||||||| Sbjct: 313561 cggcgtcaacgccgagggct 313580 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 92 cggcgtcaacgccgagggct 111 |||||||||||||||||||| Sbjct: 213619 cggcgtcaacgccgagggct 213600
>emb|BX248342.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 9/14 Length = 306550 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 92 cggcgtcaacgccgagggct 111 |||||||||||||||||||| Sbjct: 285037 cggcgtcaacgccgagggct 285018
>emb|BX248338.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 5/14 Length = 299450 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 92 cggcgtcaacgccgagggct 111 |||||||||||||||||||| Sbjct: 28689 cggcgtcaacgccgagggct 28670
>emb|BX248337.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 4/14 Length = 327650 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 cggcgtcaacgccgagggct 111 |||||||||||||||||||| Sbjct: 183435 cggcgtcaacgccgagggct 183454
>emb|BX248336.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 3/14 Length = 320050 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 330 gctgccaagtcggccggcatcctctgct 357 |||||||||||||||| |||| |||||| Sbjct: 264717 gctgccaagtcggccgtcatcgtctgct 264744
>emb|AL939112.1|SCO939112 Streptomyces coelicolor A3(2) complete genome; segment 9/29 Length = 300800 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 395 ggcccaggccgcccgcgacg 414 |||||||||||||||||||| Sbjct: 102149 ggcccaggccgcccgcgacg 102168
>emb|AL591985.1|RME591985 Sinorhizobium meliloti 1021 complete pSymB Length = 1683333 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 386 ctggccctcggcccaggccg 405 |||||||||||||||||||| Sbjct: 1439719 ctggccctcggcccaggccg 1439700
>gb|AC114474.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0032N04, from chromosome 10, complete sequence Length = 159445 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 242 cctcatccgccgcgcccgca 261 |||||||||||||||||||| Sbjct: 129183 cctcatccgccgcgcccgca 129202
>emb|X84741.1|MBBIS1081 Mycobacterium bovis BCG IS1081 DNA Length = 1902 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 cggcgtcaacgccgagggct 111 |||||||||||||||||||| Sbjct: 748 cggcgtcaacgccgagggct 767
>gb|AC092748.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0019N10, from chromosome 10, complete sequence Length = 192267 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 242 cctcatccgccgcgcccgca 261 |||||||||||||||||||| Sbjct: 103197 cctcatccgccgcgcccgca 103178
>gb|CP000264.1| Jannaschia sp. CCS1, complete genome Length = 4317977 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 70 tggtggagatcctgaagcag 89 |||||||||||||||||||| Sbjct: 1931969 tggtggagatcctgaagcag 1931988
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 143 ggccttcgtcacgctcaagg 162 |||||||||||||||||||| Sbjct: 4594808 ggccttcgtcacgctcaagg 4594789 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 acggcgtcaacgccgagggc 110 |||||||||||||||||||| Sbjct: 2335168 acggcgtcaacgccgagggc 2335149
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 242 cctcatccgccgcgcccgca 261 |||||||||||||||||||| Sbjct: 11811122 cctcatccgccgcgcccgca 11811141
>dbj|AP003267.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0496H05 Length = 147817 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 430 ggaaggaggccgacttcatc 449 |||||||||||||||||||| Sbjct: 60652 ggaaggaggccgacttcatc 60633
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 212 gctgctcacggaggccgagctcaacctg 239 |||||||||||||||| ||| ||||||| Sbjct: 4056799 gctgctcacggaggccaagcgcaacctg 4056772
>emb|X61270.1|MBIS1081 M.bovis insertion sequence IS1081 Length = 1712 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 cggcgtcaacgccgagggct 111 |||||||||||||||||||| Sbjct: 948 cggcgtcaacgccgagggct 967
>dbj|AK104976.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-123-H07, full insert sequence Length = 2293 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 242 cctcatccgccgcgcccgca 261 |||||||||||||||||||| Sbjct: 248 cctcatccgccgcgcccgca 267
>dbj|AK069494.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023025F12, full insert sequence Length = 1939 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 430 ggaaggaggccgacttcatc 449 |||||||||||||||||||| Sbjct: 1464 ggaaggaggccgacttcatc 1483
>dbj|AK069060.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023005G23, full insert sequence Length = 2323 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 242 cctcatccgccgcgcccgca 261 |||||||||||||||||||| Sbjct: 277 cctcatccgccgcgcccgca 296
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 242 cctcatccgccgcgcccgca 261 |||||||||||||||||||| Sbjct: 11818462 cctcatccgccgcgcccgca 11818481
>gb|M86823.1|RCANIFA Rhodobacter sphaeroides ORF1, complete cds; nifU gene, complete cds; nifS gene, complete cds; nifV gene, complete cds; nifW gene, complete cds; rponN gene, partial cds Length = 5540 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 131 gcgcacggccctggccttcg 150 |||||||||||||||||||| Sbjct: 4533 gcgcacggccctggccttcg 4552 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,390,525 Number of Sequences: 3902068 Number of extensions: 3390525 Number of successful extensions: 70033 Number of sequences better than 10.0: 73 Number of HSP's better than 10.0 without gapping: 74 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 67709 Number of HSP's gapped (non-prelim): 2304 length of query: 558 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 535 effective length of database: 17,143,297,704 effective search space: 9171664271640 effective search space used: 9171664271640 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
