Clone Name | bart48f02 |
---|---|
Clone Library Name | barley_pub |
>gb|AF244679.1|AF244679 Zea mays glutathione S-transferase GST 14 mRNA, complete cds Length = 1007 Score = 434 bits (219), Expect = e-118 Identities = 303/331 (91%) Strand = Plus / Plus Query: 106 gtgaaggtgttcgggtcgccgacgtcgtcggaggtcgcccgcgtcctgacgtgcctcttc 165 |||||||||||||| |||||||||||| |||||||||||||||||||| | ||||| ||| Sbjct: 85 gtgaaggtgttcggatcgccgacgtcggcggaggtcgcccgcgtcctggcctgcctgttc 144 Query: 166 gagaaggatgtcgagttccagctcatccgtgtcgactccttccgcggccccaaccgcatg 225 |||||||| |||||||||||||||||||| |||||||||||||||||| |||| ||| || Sbjct: 145 gagaaggacgtcgagttccagctcatccgcgtcgactccttccgcggcaccaagcgcctg 204 Query: 226 ccccagtacctcaagctgcagccgcacggcgaggcgctcaccttcgaggacggcaacgtc 285 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 205 ccccagtacctcaagctccagccgcacggcgaggcgctcaccttcgaggacggcaacgtc 264 Query: 286 accctcgttgagtcgaggaagatcctgaggcacatcgccgacaagtacaagaggcagggg 345 |||||||| |||||||||||||||||| | |||||||||||||||||||||| |||||| Sbjct: 265 accctcgtcgagtcgaggaagatcctgcgccacatcgccgacaagtacaagaaccagggg 324 Query: 346 aacccggacctgatcgggatgggggcgctggagcgctcgtccatcgagcagtggctgcag 405 || ||||||| |||| ||| ||||||||||| | ||||||||||||||||||||| Sbjct: 325 tacagggacctgttcggcccgggcgcgctggagcgggcctccatcgagcagtggctgcag 384 Query: 406 acggaggcgcagagcttcgacgtgcccagcg 436 ||||||||||||||||||||||| ||||||| Sbjct: 385 acggaggcgcagagcttcgacgtccccagcg 415
>ref|NM_197602.1| Oryza sativa (japonica cultivar-group) putative glutathione S-transferase (OSJNBb0015I11.25), mRNA Length = 1206 Score = 420 bits (212), Expect = e-114 Identities = 311/344 (90%) Strand = Plus / Plus Query: 93 gatgccgggagccgtgaaggtgttcgggtcgccgacgtcgtcggaggtcgcccgcgtcct 152 |||||||||||||||||||||||||||||||||| ||||| | ||||| |||||||| || Sbjct: 87 gatgccgggagccgtgaaggtgttcgggtcgccgtcgtcggccgaggtggcccgcgtgct 146 Query: 153 gacgtgcctcttcgagaaggatgtcgagttccagctcatccgtgtcgactccttccgcgg 212 | | ||||| ||||||||||| |||||||||||||||||||| ||||||||||| ||||| Sbjct: 147 ggcttgcctgttcgagaaggacgtcgagttccagctcatccgcgtcgactcctttcgcgg 206 Query: 213 ccccaaccgcatgccccagtacctcaagctgcagccgcacggcgaggcgctcaccttcga 272 |||| |||||||||||||| ||||| || ||||| ||||||||||| ||||||||||| Sbjct: 207 gtccaaacgcatgccccagtatctcaaactccagcctcacggcgaggctctcaccttcga 266 Query: 273 ggacggcaacgtcaccctcgttgagtcgaggaagatcctgaggcacatcgccgacaagta 332 ||||||||| || || ||||| ||||||||||||||| | |||||||| || |||||||| Sbjct: 267 ggacggcaatgtgacgctcgtcgagtcgaggaagatcataaggcacattgcggacaagta 326 Query: 333 caagaggcaggggaacccggacctgatcgggatgggggcgctggagcgctcgtccatcga 392 ||||| ||||||||||||||||||||||||||||||||| ||||| | ||||| ||||| Sbjct: 327 caagaaccaggggaacccggacctgatcgggatgggggcgttggagaggtcgtcgatcga 386 Query: 393 gcagtggctgcagacggaggcgcagagcttcgacgtgcccagcg 436 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 387 gcagtggctgcagacggaggcgcagagcttcgacgtgcccagcg 430
>dbj|AB103350.1| Oryza sativa (japonica cultivar-group) GST mRNA for glutathione S-transferase, complete cd Length = 1238 Score = 420 bits (212), Expect = e-114 Identities = 311/344 (90%) Strand = Plus / Plus Query: 93 gatgccgggagccgtgaaggtgttcgggtcgccgacgtcgtcggaggtcgcccgcgtcct 152 |||||||||||||||||||||||||||||||||| ||||| | ||||| |||||||| || Sbjct: 87 gatgccgggagccgtgaaggtgttcgggtcgccgtcgtcggccgaggtggcccgcgtgct 146 Query: 153 gacgtgcctcttcgagaaggatgtcgagttccagctcatccgtgtcgactccttccgcgg 212 | | ||||| ||||||||||| |||||||||||||||||||| ||||||||||| ||||| Sbjct: 147 ggcttgcctgttcgagaaggacgtcgagttccagctcatccgcgtcgactcctttcgcgg 206 Query: 213 ccccaaccgcatgccccagtacctcaagctgcagccgcacggcgaggcgctcaccttcga 272 |||| |||||||||||||| ||||| || ||||| ||||||||||| ||||||||||| Sbjct: 207 gtccaaacgcatgccccagtatctcaaactccagcctcacggcgaggctctcaccttcga 266 Query: 273 ggacggcaacgtcaccctcgttgagtcgaggaagatcctgaggcacatcgccgacaagta 332 ||||||||| || || ||||| ||||||||||||||| | |||||||| || |||||||| Sbjct: 267 ggacggcaatgtgacgctcgtcgagtcgaggaagatcataaggcacattgcggacaagta 326 Query: 333 caagaggcaggggaacccggacctgatcgggatgggggcgctggagcgctcgtccatcga 392 ||||| ||||||||||||||||||||||||||||||||| ||||| | ||||| ||||| Sbjct: 327 caagaaccaggggaacccggacctgatcgggatgggggcgttggagaggtcgtcgatcga 386 Query: 393 gcagtggctgcagacggaggcgcagagcttcgacgtgcccagcg 436 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 387 gcagtggctgcagacggaggcgcagagcttcgacgtgcccagcg 430
>dbj|AK102889.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033112M16, full insert sequence Length = 1300 Score = 301 bits (152), Expect = 1e-78 Identities = 287/332 (86%) Strand = Plus / Plus Query: 105 cgtgaaggtgttcgggtcgccgacgtcgtcggaggtcgcccgcgtcctgacgtgcctctt 164 ||||||||| |||||||| || || ||| ||||||| |||||||| || ||||||||||| Sbjct: 107 cgtgaaggttttcgggtcacccacctcggcggaggttgcccgcgtgctcacgtgcctctt 166 Query: 165 cgagaaggatgtcgagttccagctcatccgtgtcgactccttccgcggccccaaccgcat 224 ||||||||| ||||||||||||||| ||||||||||| | | ||||||| | | ||||| Sbjct: 167 cgagaaggacgtcgagttccagctcgtccgtgtcgacgcgtaccgcggcacgcagcgcat 226 Query: 225 gccccagtacctcaagctgcagccgcacggcgaggcgctcaccttcgaggacggcaacgt 284 |||||| || |||||||| ||||||| ||||||||||||||| ||||| || | |||| | Sbjct: 227 gccccaatatctcaagcttcagccgctcggcgaggcgctcacgttcgaagatgacaacct 286 Query: 285 caccctcgttgagtcgaggaagatcctgaggcacatcgccgacaagtacaagaggcaggg 344 |||||| ||||||||| |||||| | ||||| || |||||||| ||||||||| Sbjct: 287 caccctgtccgagtcgagggggatccttcgccacatagcgcacaagtacgcgaggcaggg 346 Query: 345 gaacccggacctgatcgggatgggggcgctggagcgctcgtccatcgagcagtggctgca 404 ||||||||||||||||| | ||| |||||||||||| |||||||||||||||||||||| Sbjct: 347 aaacccggacctgatcggcacgggcgcgctggagcgcgcgtccatcgagcagtggctgca 406 Query: 405 gacggaggcgcagagcttcgacgtgcccagcg 436 |||||||||||||||||||||||||||||||| Sbjct: 407 gacggaggcgcagagcttcgacgtgcccagcg 438
>gb|AY103672.1| Zea mays PCO064413 mRNA sequence Length = 1195 Score = 301 bits (152), Expect = 1e-78 Identities = 287/332 (86%) Strand = Plus / Plus Query: 105 cgtgaaggtgttcgggtcgccgacgtcgtcggaggtcgcccgcgtcctgacgtgcctctt 164 ||||||||| |||||||| || || ||| |||||||||||||||| || | ||||||||| Sbjct: 52 cgtgaaggttttcgggtcacccacctcggcggaggtcgcccgcgtgctcatgtgcctctt 111 Query: 165 cgagaaggatgtcgagttccagctcatccgtgtcgactccttccgcggccccaaccgcat 224 ||||||||| || ||||||||||| ||||| |||||| ||| ||||||| |||| ||||| Sbjct: 112 cgagaaggaggtggagttccagctgatccgcgtcgacgcctaccgcggcaccaagcgcat 171 Query: 225 gccccagtacctcaagctgcagccgcacggcgaggcgctcaccttcgaggacggcaacgt 284 ||||||||||||||||||||||||||| ||||||||||||||||||||||||| | | | Sbjct: 172 gccccagtacctcaagctgcagccgcaaggcgaggcgctcaccttcgaggacgagagcct 231 Query: 285 caccctcgttgagtcgaggaagatcctgaggcacatcgccgacaagtacaagaggcaggg 344 ||||||| || || ||| |||||| | |||||| || |||||||| || |||||| Sbjct: 232 caccctctccgactccagggggatcctccgccacatctcccacaagtacgcgaagcaggg 291 Query: 345 gaacccggacctgatcgggatgggggcgctggagcgctcgtccatcgagcagtggctgca 404 |||||| ||||||| || | ||| ||||||||||| |||||||||||||||||||||| Sbjct: 292 caacccgtacctgattggcacgggcgcgctggagcgggcgtccatcgagcagtggctgca 351 Query: 405 gacggaggcgcagagcttcgacgtgcccagcg 436 ||||||||||||||||||||||| |||||||| Sbjct: 352 gacggaggcgcagagcttcgacgcgcccagcg 383
>ref|XM_470189.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 960 Score = 293 bits (148), Expect = 2e-76 Identities = 286/332 (86%) Strand = Plus / Plus Query: 105 cgtgaaggtgttcgggtcgccgacgtcgtcggaggtcgcccgcgtcctgacgtgcctctt 164 ||||||||| |||||||| || || ||| ||||||| |||||||| || | ||||||||| Sbjct: 15 cgtgaaggttttcgggtcacccacctcggcggaggttgcccgcgtgctcatgtgcctctt 74 Query: 165 cgagaaggatgtcgagttccagctcatccgtgtcgactccttccgcggccccaaccgcat 224 ||||||||| ||||||||||||||| ||||||||||| | | ||||||| | | ||||| Sbjct: 75 cgagaaggacgtcgagttccagctcgtccgtgtcgacgcgtaccgcggcacgcagcgcat 134 Query: 225 gccccagtacctcaagctgcagccgcacggcgaggcgctcaccttcgaggacggcaacgt 284 |||||| || |||||||| ||||||| ||||||||||||||| ||||| || | |||| | Sbjct: 135 gccccaatatctcaagcttcagccgctcggcgaggcgctcacgttcgaagatgacaacct 194 Query: 285 caccctcgttgagtcgaggaagatcctgaggcacatcgccgacaagtacaagaggcaggg 344 |||||| ||||||||| |||||| | ||||| || |||||||| ||||||||| Sbjct: 195 caccctgtccgagtcgagggggatccttcgccacatagcgcacaagtacgcgaggcaggg 254 Query: 345 gaacccggacctgatcgggatgggggcgctggagcgctcgtccatcgagcagtggctgca 404 ||||||||||||||||| | ||| |||||||||||| |||||||||||||||||||||| Sbjct: 255 aaacccggacctgatcggcacgggcgcgctggagcgcgcgtccatcgagcagtggctgca 314 Query: 405 gacggaggcgcagagcttcgacgtgcccagcg 436 |||||||||||||||||||||||||||||||| Sbjct: 315 gacggaggcgcagagcttcgacgtgcccagcg 346
>gb|AY533122.1| Oryza sativa (japonica cultivar-group) glutathione S-transferase GSTF14 mRNA, partial cds Length = 825 Score = 293 bits (148), Expect = 2e-76 Identities = 286/332 (86%) Strand = Plus / Plus Query: 105 cgtgaaggtgttcgggtcgccgacgtcgtcggaggtcgcccgcgtcctgacgtgcctctt 164 ||||||||| |||||||| || || ||| ||||||| |||||||| || | ||||||||| Sbjct: 15 cgtgaaggttttcgggtcacccacctcggcggaggttgcccgcgtgctcatgtgcctctt 74 Query: 165 cgagaaggatgtcgagttccagctcatccgtgtcgactccttccgcggccccaaccgcat 224 ||||||||| ||||||||||||||| ||||||||||| | | ||||||| | | ||||| Sbjct: 75 cgagaaggacgtcgagttccagctcgtccgtgtcgacgcgtaccgcggcacgcagcgcat 134 Query: 225 gccccagtacctcaagctgcagccgcacggcgaggcgctcaccttcgaggacggcaacgt 284 |||||| || |||||||| ||||||| ||||||||||||||| ||||| || | |||| | Sbjct: 135 gccccaatatctcaagcttcagccgctcggcgaggcgctcacgttcgaagatgacaacct 194 Query: 285 caccctcgttgagtcgaggaagatcctgaggcacatcgccgacaagtacaagaggcaggg 344 |||||| ||||||||| |||||| | ||||| || |||||||| ||||||||| Sbjct: 195 caccctgtccgagtcgagggggatccttcgccacatagcgcacaagtacgcgaggcaggg 254 Query: 345 gaacccggacctgatcgggatgggggcgctggagcgctcgtccatcgagcagtggctgca 404 ||||||||||||||||| | ||| |||||||||||| |||||||||||||||||||||| Sbjct: 255 aaacccggacctgatcggcacgggcgcgctggagcgcgcgtccatcgagcagtggctgca 314 Query: 405 gacggaggcgcagagcttcgacgtgcccagcg 436 |||||||||||||||||||||||||||||||| Sbjct: 315 gacggaggcgcagagcttcgacgtgcccagcg 346
>gb|AF244676.1|AF244676 Zea mays glutathione S-transferase GST 11 mRNA, complete cds Length = 1279 Score = 287 bits (145), Expect = 1e-74 Identities = 287/333 (86%), Gaps = 1/333 (0%) Strand = Plus / Plus Query: 105 cgtgaaggtgttcgggtcgccgacgtcgtcggaggtcgcccgcgtcctgacgtgcctctt 164 ||||||||| |||||||| || || ||| |||||||||||||||| || | ||||||||| Sbjct: 46 cgtgaaggttttcgggtcacccacctcggcggaggtcgcccgcgtgctcatgtgcctctt 105 Query: 165 cgagaaggatgtcgagttccagctcatccgtgtcgactccttccgcggccccaaccgcat 224 ||||||||| || ||||||||||| ||||| |||||| ||| ||||||| |||| ||||| Sbjct: 106 cgagaaggaggtggagttccagctgatccgcgtcgacgcctaccgcggcaccaagcgcat 165 Query: 225 gccccagtacctcaagctgcagccgcacggcgaggcgctcaccttcgaggacggcaacgt 284 ||||||||||||||||||||||||||| ||||||||||||||||||||||||| | | | Sbjct: 166 gccccagtacctcaagctgcagccgcaaggcgaggcgctcaccttcgaggacgagagcct 225 Query: 285 caccctcgttgagtcgaggaagatcctgaggcacatcgccgacaagtacaagaggcaggg 344 ||||||| || || ||| |||||| | |||||| || |||||||| || |||||| Sbjct: 226 caccctctccgactccagggggatcctccgccacatctcccacaagtacgcgaagcaggg 285 Query: 345 gaacccg-gacctgatcgggatgggggcgctggagcgctcgtccatcgagcagtggctgc 403 |||||| ||||||| || | ||| ||||||||||| ||||||||||||||||||||| Sbjct: 286 caacccgttacctgattggcacgggcgcgctggagcgggcgtccatcgagcagtggctgc 345 Query: 404 agacggaggcgcagagcttcgacgtgcccagcg 436 |||||||||||||||||||||||| |||||||| Sbjct: 346 agacggaggcgcagagcttcgacgcgcccagcg 378
>gb|AC051633.7| Oryza sativa chromosome 10 BAC OSJNBb0015I11 genomic sequence, complete sequence Length = 138824 Score = 202 bits (102), Expect = 7e-49 Identities = 132/142 (92%) Strand = Plus / Minus Query: 295 gagtcgaggaagatcctgaggcacatcgccgacaagtacaagaggcaggggaacccggac 354 ||||||||||||||| | |||||||| || ||||||||||||| ||||||||||||||| Sbjct: 114792 gagtcgaggaagatcataaggcacattgcggacaagtacaagaaccaggggaacccggac 114733 Query: 355 ctgatcgggatgggggcgctggagcgctcgtccatcgagcagtggctgcagacggaggcg 414 |||||||||||||||||| ||||| | ||||| ||||||||||||||||||||||||||| Sbjct: 114732 ctgatcgggatgggggcgttggagaggtcgtcgatcgagcagtggctgcagacggaggcg 114673 Query: 415 cagagcttcgacgtgcccagcg 436 |||||||||||||||||||||| Sbjct: 114672 cagagcttcgacgtgcccagcg 114651 Score = 172 bits (87), Expect = 6e-40 Identities = 132/147 (89%) Strand = Plus / Minus Query: 93 gatgccgggagccgtgaaggtgttcgggtcgccgacgtcgtcggaggtcgcccgcgtcct 152 |||||||||||||||||||||||||||||||||| ||||| | ||||| |||||||| || Sbjct: 115274 gatgccgggagccgtgaaggtgttcgggtcgccgtcgtcggccgaggtggcccgcgtgct 115215 Query: 153 gacgtgcctcttcgagaaggatgtcgagttccagctcatccgtgtcgactccttccgcgg 212 | | ||||| ||||||||||| |||||||||||||||||||| ||||||||||| ||||| Sbjct: 115214 ggcttgcctgttcgagaaggacgtcgagttccagctcatccgcgtcgactcctttcgcgg 115155 Query: 213 ccccaaccgcatgccccagtacctcaa 239 |||| |||||||||||||| ||||| Sbjct: 115154 gtccaaacgcatgccccagtatctcaa 115128 Score = 58.0 bits (29), Expect = 2e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 245 agccgcacggcgaggcgctcaccttcgaggacggcaa 281 |||| ||||||||||| |||||||||||||||||||| Sbjct: 114917 agcctcacggcgaggctctcaccttcgaggacggcaa 114881
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 202 bits (102), Expect = 7e-49 Identities = 132/142 (92%) Strand = Plus / Minus Query: 295 gagtcgaggaagatcctgaggcacatcgccgacaagtacaagaggcaggggaacccggac 354 ||||||||||||||| | |||||||| || ||||||||||||| ||||||||||||||| Sbjct: 20713340 gagtcgaggaagatcataaggcacattgcggacaagtacaagaaccaggggaacccggac 20713281 Query: 355 ctgatcgggatgggggcgctggagcgctcgtccatcgagcagtggctgcagacggaggcg 414 |||||||||||||||||| ||||| | ||||| ||||||||||||||||||||||||||| Sbjct: 20713280 ctgatcgggatgggggcgttggagaggtcgtcgatcgagcagtggctgcagacggaggcg 20713221 Query: 415 cagagcttcgacgtgcccagcg 436 |||||||||||||||||||||| Sbjct: 20713220 cagagcttcgacgtgcccagcg 20713199 Score = 172 bits (87), Expect = 6e-40 Identities = 132/147 (89%) Strand = Plus / Minus Query: 93 gatgccgggagccgtgaaggtgttcgggtcgccgacgtcgtcggaggtcgcccgcgtcct 152 |||||||||||||||||||||||||||||||||| ||||| | ||||| |||||||| || Sbjct: 20713822 gatgccgggagccgtgaaggtgttcgggtcgccgtcgtcggccgaggtggcccgcgtgct 20713763 Query: 153 gacgtgcctcttcgagaaggatgtcgagttccagctcatccgtgtcgactccttccgcgg 212 | | ||||| ||||||||||| |||||||||||||||||||| ||||||||||| ||||| Sbjct: 20713762 ggcttgcctgttcgagaaggacgtcgagttccagctcatccgcgtcgactcctttcgcgg 20713703 Query: 213 ccccaaccgcatgccccagtacctcaa 239 |||| |||||||||||||| ||||| Sbjct: 20713702 gtccaaacgcatgccccagtatctcaa 20713676 Score = 58.0 bits (29), Expect = 2e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 245 agccgcacggcgaggcgctcaccttcgaggacggcaa 281 |||| ||||||||||| |||||||||||||||||||| Sbjct: 20713465 agcctcacggcgaggctctcaccttcgaggacggcaa 20713429
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 202 bits (102), Expect = 7e-49 Identities = 132/142 (92%) Strand = Plus / Minus Query: 295 gagtcgaggaagatcctgaggcacatcgccgacaagtacaagaggcaggggaacccggac 354 ||||||||||||||| | |||||||| || ||||||||||||| ||||||||||||||| Sbjct: 20724612 gagtcgaggaagatcataaggcacattgcggacaagtacaagaaccaggggaacccggac 20724553 Query: 355 ctgatcgggatgggggcgctggagcgctcgtccatcgagcagtggctgcagacggaggcg 414 |||||||||||||||||| ||||| | ||||| ||||||||||||||||||||||||||| Sbjct: 20724552 ctgatcgggatgggggcgttggagaggtcgtcgatcgagcagtggctgcagacggaggcg 20724493 Query: 415 cagagcttcgacgtgcccagcg 436 |||||||||||||||||||||| Sbjct: 20724492 cagagcttcgacgtgcccagcg 20724471 Score = 172 bits (87), Expect = 6e-40 Identities = 132/147 (89%) Strand = Plus / Minus Query: 93 gatgccgggagccgtgaaggtgttcgggtcgccgacgtcgtcggaggtcgcccgcgtcct 152 |||||||||||||||||||||||||||||||||| ||||| | ||||| |||||||| || Sbjct: 20725094 gatgccgggagccgtgaaggtgttcgggtcgccgtcgtcggccgaggtggcccgcgtgct 20725035 Query: 153 gacgtgcctcttcgagaaggatgtcgagttccagctcatccgtgtcgactccttccgcgg 212 | | ||||| ||||||||||| |||||||||||||||||||| ||||||||||| ||||| Sbjct: 20725034 ggcttgcctgttcgagaaggacgtcgagttccagctcatccgcgtcgactcctttcgcgg 20724975 Query: 213 ccccaaccgcatgccccagtacctcaa 239 |||| |||||||||||||| ||||| Sbjct: 20724974 gtccaaacgcatgccccagtatctcaa 20724948 Score = 58.0 bits (29), Expect = 2e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 245 agccgcacggcgaggcgctcaccttcgaggacggcaa 281 |||| ||||||||||| |||||||||||||||||||| Sbjct: 20724737 agcctcacggcgaggctctcaccttcgaggacggcaa 20724701
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 165 bits (83), Expect = 1e-37 Identities = 104/111 (93%) Strand = Plus / Minus Query: 326 acaagtacaagaggcaggggaacccggacctgatcgggatgggggcgctggagcgctcgt 385 |||||||| ||||||||| ||||||||||||||||| | ||| |||||||||||| ||| Sbjct: 1919661 acaagtacgcgaggcagggaaacccggacctgatcggcacgggcgcgctggagcgcgcgt 1919602 Query: 386 ccatcgagcagtggctgcagacggaggcgcagagcttcgacgtgcccagcg 436 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1919601 ccatcgagcagtggctgcagacggaggcgcagagcttcgacgtgcccagcg 1919551 Score = 115 bits (58), Expect = 1e-22 Identities = 118/138 (85%) Strand = Plus / Minus Query: 105 cgtgaaggtgttcgggtcgccgacgtcgtcggaggtcgcccgcgtcctgacgtgcctctt 164 ||||||||| |||||||| || || ||| ||||||| |||||||| || | ||||||||| Sbjct: 1920037 cgtgaaggttttcgggtcacccacctcggcggaggttgcccgcgtgctcatgtgcctctt 1919978 Query: 165 cgagaaggatgtcgagttccagctcatccgtgtcgactccttccgcggccccaaccgcat 224 ||||||||| ||||||||||||||| ||||||||||| | | ||||||| | | ||||| Sbjct: 1919977 cgagaaggacgtcgagttccagctcgtccgtgtcgacgcgtaccgcggcacgcagcgcat 1919918 Query: 225 gccccagtacctcaagct 242 |||||| || |||||||| Sbjct: 1919917 gccccaatatctcaagct 1919900 Score = 87.7 bits (44), Expect = 3e-14 Identities = 62/68 (91%) Strand = Plus / Minus Query: 360 cgggatgggggcgctggagcgctcgtccatcgagcagtggctgcagacggaggcgcagag 419 ||||| |||| |||||||||| |||| |||||||||||||||||| ||||||||||||| Sbjct: 1929413 cgggacggggtcgctggagcgggcgtcgatcgagcagtggctgcaggcggaggcgcagag 1929354 Query: 420 cttcgacg 427 |||||||| Sbjct: 1929353 cttcgacg 1929346 Score = 50.1 bits (25), Expect = 0.006 Identities = 43/49 (87%) Strand = Plus / Minus Query: 242 tgcagccgcacggcgaggcgctcaccttcgaggacggcaacgtcaccct 290 ||||||||| ||||||||||||||| ||||| || | |||| ||||||| Sbjct: 1919826 tgcagccgctcggcgaggcgctcacgttcgaagatgacaacctcaccct 1919778 Score = 46.1 bits (23), Expect = 0.095 Identities = 41/47 (87%) Strand = Plus / Minus Query: 148 gtcctgacgtgcctcttcgagaaggatgtcgagttccagctcatccg 194 |||||||| || |||||||||||| | |||||||| |||||||||| Sbjct: 1929832 gtcctgacctgtctcttcgagaagaacctcgagttcgagctcatccg 1929786
>gb|AC099399.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1006F06, complete sequence Length = 122218 Score = 165 bits (83), Expect = 1e-37 Identities = 104/111 (93%) Strand = Plus / Plus Query: 326 acaagtacaagaggcaggggaacccggacctgatcgggatgggggcgctggagcgctcgt 385 |||||||| ||||||||| ||||||||||||||||| | ||| |||||||||||| ||| Sbjct: 55750 acaagtacgcgaggcagggaaacccggacctgatcggcacgggcgcgctggagcgcgcgt 55809 Query: 386 ccatcgagcagtggctgcagacggaggcgcagagcttcgacgtgcccagcg 436 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 55810 ccatcgagcagtggctgcagacggaggcgcagagcttcgacgtgcccagcg 55860 Score = 115 bits (58), Expect = 1e-22 Identities = 118/138 (85%) Strand = Plus / Plus Query: 105 cgtgaaggtgttcgggtcgccgacgtcgtcggaggtcgcccgcgtcctgacgtgcctctt 164 ||||||||| |||||||| || || ||| ||||||| |||||||| || | ||||||||| Sbjct: 55374 cgtgaaggttttcgggtcacccacctcggcggaggttgcccgcgtgctcatgtgcctctt 55433 Query: 165 cgagaaggatgtcgagttccagctcatccgtgtcgactccttccgcggccccaaccgcat 224 ||||||||| ||||||||||||||| ||||||||||| | | ||||||| | | ||||| Sbjct: 55434 cgagaaggacgtcgagttccagctcgtccgtgtcgacgcgtaccgcggcacgcagcgcat 55493 Query: 225 gccccagtacctcaagct 242 |||||| || |||||||| Sbjct: 55494 gccccaatatctcaagct 55511 Score = 87.7 bits (44), Expect = 3e-14 Identities = 62/68 (91%) Strand = Plus / Plus Query: 360 cgggatgggggcgctggagcgctcgtccatcgagcagtggctgcagacggaggcgcagag 419 ||||| |||| |||||||||| |||| |||||||||||||||||| ||||||||||||| Sbjct: 45998 cgggacggggtcgctggagcgggcgtcgatcgagcagtggctgcaggcggaggcgcagag 46057 Query: 420 cttcgacg 427 |||||||| Sbjct: 46058 cttcgacg 46065 Score = 50.1 bits (25), Expect = 0.006 Identities = 43/49 (87%) Strand = Plus / Plus Query: 242 tgcagccgcacggcgaggcgctcaccttcgaggacggcaacgtcaccct 290 ||||||||| ||||||||||||||| ||||| || | |||| ||||||| Sbjct: 55585 tgcagccgctcggcgaggcgctcacgttcgaagatgacaacctcaccct 55633 Score = 46.1 bits (23), Expect = 0.095 Identities = 41/47 (87%) Strand = Plus / Plus Query: 148 gtcctgacgtgcctcttcgagaaggatgtcgagttccagctcatccg 194 |||||||| || |||||||||||| | |||||||| |||||||||| Sbjct: 45579 gtcctgacctgtctcttcgagaagaacctcgagttcgagctcatccg 45625
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 165 bits (83), Expect = 1e-37 Identities = 104/111 (93%) Strand = Plus / Minus Query: 326 acaagtacaagaggcaggggaacccggacctgatcgggatgggggcgctggagcgctcgt 385 |||||||| ||||||||| ||||||||||||||||| | ||| |||||||||||| ||| Sbjct: 1919659 acaagtacgcgaggcagggaaacccggacctgatcggcacgggcgcgctggagcgcgcgt 1919600 Query: 386 ccatcgagcagtggctgcagacggaggcgcagagcttcgacgtgcccagcg 436 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1919599 ccatcgagcagtggctgcagacggaggcgcagagcttcgacgtgcccagcg 1919549 Score = 115 bits (58), Expect = 1e-22 Identities = 118/138 (85%) Strand = Plus / Minus Query: 105 cgtgaaggtgttcgggtcgccgacgtcgtcggaggtcgcccgcgtcctgacgtgcctctt 164 ||||||||| |||||||| || || ||| ||||||| |||||||| || | ||||||||| Sbjct: 1920035 cgtgaaggttttcgggtcacccacctcggcggaggttgcccgcgtgctcatgtgcctctt 1919976 Query: 165 cgagaaggatgtcgagttccagctcatccgtgtcgactccttccgcggccccaaccgcat 224 ||||||||| ||||||||||||||| ||||||||||| | | ||||||| | | ||||| Sbjct: 1919975 cgagaaggacgtcgagttccagctcgtccgtgtcgacgcgtaccgcggcacgcagcgcat 1919916 Query: 225 gccccagtacctcaagct 242 |||||| || |||||||| Sbjct: 1919915 gccccaatatctcaagct 1919898 Score = 87.7 bits (44), Expect = 3e-14 Identities = 62/68 (91%) Strand = Plus / Minus Query: 360 cgggatgggggcgctggagcgctcgtccatcgagcagtggctgcagacggaggcgcagag 419 ||||| |||| |||||||||| |||| |||||||||||||||||| ||||||||||||| Sbjct: 1929411 cgggacggggtcgctggagcgggcgtcgatcgagcagtggctgcaggcggaggcgcagag 1929352 Query: 420 cttcgacg 427 |||||||| Sbjct: 1929351 cttcgacg 1929344 Score = 50.1 bits (25), Expect = 0.006 Identities = 43/49 (87%) Strand = Plus / Minus Query: 242 tgcagccgcacggcgaggcgctcaccttcgaggacggcaacgtcaccct 290 ||||||||| ||||||||||||||| ||||| || | |||| ||||||| Sbjct: 1919824 tgcagccgctcggcgaggcgctcacgttcgaagatgacaacctcaccct 1919776 Score = 46.1 bits (23), Expect = 0.095 Identities = 41/47 (87%) Strand = Plus / Minus Query: 148 gtcctgacgtgcctcttcgagaaggatgtcgagttccagctcatccg 194 |||||||| || |||||||||||| | |||||||| |||||||||| Sbjct: 1929830 gtcctgacctgtctcttcgagaagaacctcgagttcgagctcatccg 1929784
>ref|XM_470191.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 678 Score = 87.7 bits (44), Expect = 3e-14 Identities = 62/68 (91%) Strand = Plus / Plus Query: 360 cgggatgggggcgctggagcgctcgtccatcgagcagtggctgcagacggaggcgcagag 419 ||||| |||| |||||||||| |||| |||||||||||||||||| ||||||||||||| Sbjct: 267 cgggacggggtcgctggagcgggcgtcgatcgagcagtggctgcaggcggaggcgcagag 326 Query: 420 cttcgacg 427 |||||||| Sbjct: 327 cttcgacg 334 Score = 46.1 bits (23), Expect = 0.095 Identities = 41/47 (87%) Strand = Plus / Plus Query: 148 gtcctgacgtgcctcttcgagaaggatgtcgagttccagctcatccg 194 |||||||| || |||||||||||| | |||||||| |||||||||| Sbjct: 55 gtcctgacctgtctcttcgagaagaacctcgagttcgagctcatccg 101
>gb|AY533123.1| Oryza sativa (japonica cultivar-group) glutathione S-transferase GSTF15 mRNA, complete cds Length = 678 Score = 87.7 bits (44), Expect = 3e-14 Identities = 62/68 (91%) Strand = Plus / Plus Query: 360 cgggatgggggcgctggagcgctcgtccatcgagcagtggctgcagacggaggcgcagag 419 ||||| |||| |||||||||| |||| |||||||||||||||||| ||||||||||||| Sbjct: 267 cgggacggggtcgctggagcgggcgtcgatcgagcagtggctgcaggcggaggcgcagag 326 Query: 420 cttcgacg 427 |||||||| Sbjct: 327 cttcgacg 334 Score = 46.1 bits (23), Expect = 0.095 Identities = 41/47 (87%) Strand = Plus / Plus Query: 148 gtcctgacgtgcctcttcgagaaggatgtcgagttccagctcatccg 194 |||||||| || |||||||||||| | |||||||| |||||||||| Sbjct: 55 gtcctgacctgtctcttcgagaagaacctcgagttcgagctcatccg 101
>dbj|AK059955.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-211-D02, full insert sequence Length = 951 Score = 87.7 bits (44), Expect = 3e-14 Identities = 62/68 (91%) Strand = Plus / Plus Query: 360 cgggatgggggcgctggagcgctcgtccatcgagcagtggctgcagacggaggcgcagag 419 ||||| |||| |||||||||| |||| |||||||||||||||||| ||||||||||||| Sbjct: 375 cgggacggggtcgctggagcgggcgtcgatcgagcagtggctgcaggcggaggcgcagag 434 Query: 420 cttcgacg 427 |||||||| Sbjct: 435 cttcgacg 442 Score = 46.1 bits (23), Expect = 0.095 Identities = 41/47 (87%) Strand = Plus / Plus Query: 148 gtcctgacgtgcctcttcgagaaggatgtcgagttccagctcatccg 194 |||||||| || |||||||||||| | |||||||| |||||||||| Sbjct: 163 gtcctgacctgtctcttcgagaagaacctcgagttcgagctcatccg 209
>gb|AF244677.1|AF244677 Zea mays glutathione S-transferase GST 12 mRNA, complete cds Length = 1198 Score = 83.8 bits (42), Expect = 4e-13 Identities = 57/62 (91%) Strand = Plus / Plus Query: 366 gggggcgctggagcgctcgtccatcgagcagtggctgcagacggaggcgcagagcttcga 425 |||| |||||||||| ||||||| ||||||||||||||| ||||||||||||||||||| Sbjct: 376 ggggtcgctggagcgggcgtccatagagcagtggctgcaggcggaggcgcagagcttcga 435 Query: 426 cg 427 || Sbjct: 436 cg 437 Score = 40.1 bits (20), Expect = 5.9 Identities = 38/44 (86%) Strand = Plus / Plus Query: 151 ctgacgtgcctcttcgagaaggatgtcgagttccagctcatccg 194 ||||| ||||||||||||||| | |||||||| ||||| |||| Sbjct: 161 ctgacctgcctcttcgagaagaacctcgagttcgagctcgtccg 204
>gb|AY103863.1| Zea mays PCO132785 mRNA sequence Length = 959 Score = 83.8 bits (42), Expect = 4e-13 Identities = 57/62 (91%) Strand = Plus / Plus Query: 366 gggggcgctggagcgctcgtccatcgagcagtggctgcagacggaggcgcagagcttcga 425 |||| |||||||||| ||||||| ||||||||||||||| ||||||||||||||||||| Sbjct: 399 ggggtcgctggagcgggcgtccatagagcagtggctgcaggcggaggcgcagagcttcga 458 Query: 426 cg 427 || Sbjct: 459 cg 460 Score = 40.1 bits (20), Expect = 5.9 Identities = 38/44 (86%) Strand = Plus / Plus Query: 151 ctgacgtgcctcttcgagaaggatgtcgagttccagctcatccg 194 ||||| ||||||||||||||| | |||||||| ||||| |||| Sbjct: 184 ctgacctgcctcttcgagaagaacctcgagttcgagctcgtccg 227
>gb|AF244678.1|AF244678 Zea mays glutathione S-transferase GST 13 mRNA, complete cds Length = 1134 Score = 79.8 bits (40), Expect = 7e-12 Identities = 61/68 (89%) Strand = Plus / Plus Query: 360 cgggatgggggcgctggagcgctcgtccatcgagcagtggctgcagacggaggcgcagag 419 ||||| |||| |||||||||| ||||||| ||||||||||||||| ||||||| ||||| Sbjct: 327 cgggacggggtcgctggagcgggcgtccatagagcagtggctgcaggcggaggcccagag 386 Query: 420 cttcgacg 427 |||||||| Sbjct: 387 cttcgacg 394 Score = 48.1 bits (24), Expect = 0.024 Identities = 39/44 (88%) Strand = Plus / Plus Query: 151 ctgacgtgcctcttcgagaaggatgtcgagttccagctcatccg 194 ||||| ||||||||||||||| | |||||||| |||||||||| Sbjct: 118 ctgacctgcctcttcgagaagaacctcgagttcgagctcatccg 161
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 48.1 bits (24), Expect = 0.024 Identities = 24/24 (100%) Strand = Plus / Plus Query: 267 cttcgaggacggcaacgtcaccct 290 |||||||||||||||||||||||| Sbjct: 3655491 cttcgaggacggcaacgtcaccct 3655514
>emb|BX842582.1| Mycobacterium tuberculosis H37Rv complete genome; segment 11/13 Length = 349563 Score = 48.1 bits (24), Expect = 0.024 Identities = 24/24 (100%) Strand = Plus / Plus Query: 267 cttcgaggacggcaacgtcaccct 290 |||||||||||||||||||||||| Sbjct: 192928 cttcgaggacggcaacgtcaccct 192951
>emb|BX248345.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 12/14 Length = 308050 Score = 48.1 bits (24), Expect = 0.024 Identities = 24/24 (100%) Strand = Plus / Plus Query: 267 cttcgaggacggcaacgtcaccct 290 |||||||||||||||||||||||| Sbjct: 172179 cttcgaggacggcaacgtcaccct 172202
>ref|XM_777499.1| PREDICTED: Strongylocentrotus purpuratus similar to Rap guanine nucleotide exchange factor (GEF) 1 (LOC577258), mRNA Length = 3246 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 79 tgaccggcgacgacgatgccg 99 ||||||||||||||||||||| Sbjct: 568 tgaccggcgacgacgatgccg 548
>ref|XM_316002.2| Anopheles gambiae str. PEST ENSANGP00000010703 (ENSANGG00000008214), partial mRNA Length = 2285 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 352 gacctgatcgggatgggggcgctggagcg 380 |||||||||||||||| || ||||||||| Sbjct: 1572 gacctgatcgggatggaggagctggagcg 1600
>gb|AC098643.3| Takifugu rubripes clone 194A9, complete sequence Length = 64849 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 398 ggctgcagacggaggcgcag 417 |||||||||||||||||||| Sbjct: 19078 ggctgcagacggaggcgcag 19097
>gb|AC102259.7| Mus musculus chromosome 3, clone RP24-199C12, complete sequence Length = 182793 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 55 aactgagcagcagagtagag 74 |||||||||||||||||||| Sbjct: 45575 aactgagcagcagagtagag 45556
>ref|XM_369575.1| Magnaporthe grisea 70-15 chromosome III hypothetical protein (MG05889.4) partial mRNA Length = 1641 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 124 ccgacgtcgtcggaggtcgcccgc 147 |||||||||||||| ||||||||| Sbjct: 1115 ccgacgtcgtcggacgtcgcccgc 1138
>gb|AY657880.1| Synthetic construct Peudomonas aeruginosa clone FLH045860.01F PA2640 gene, partial cds Length = 501 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 376 gagcgctcgtccatcgagca 395 |||||||||||||||||||| Sbjct: 52 gagcgctcgtccatcgagca 71
>gb|AC159094.4| Mus musculus chromosome 3, clone RP23-277N17, complete sequence Length = 192453 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 55 aactgagcagcagagtagag 74 |||||||||||||||||||| Sbjct: 100351 aactgagcagcagagtagag 100370
>gb|AC099049.2| Homo sapiens chromosome 3 clone RP11-291P10, complete sequence Length = 180339 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 307 atcctgaggcacatcgccga 326 |||||||||||||||||||| Sbjct: 92294 atcctgaggcacatcgccga 92313
>gb|AE004692.1| Pseudomonas aeruginosa PAO1, section 253 of 529 of the complete genome Length = 10256 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 376 gagcgctcgtccatcgagca 395 |||||||||||||||||||| Sbjct: 8369 gagcgctcgtccatcgagca 8388 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,611,159 Number of Sequences: 3902068 Number of extensions: 2611159 Number of successful extensions: 46801 Number of sequences better than 10.0: 32 Number of HSP's better than 10.0 without gapping: 32 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 46579 Number of HSP's gapped (non-prelim): 219 length of query: 436 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 414 effective length of database: 17,147,199,772 effective search space: 7098940705608 effective search space used: 7098940705608 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)