ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart48e04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1A4_DROME (P14599) Beta-amyloid-like protein precursor 35 0.21
2PROL1_HUMAN (Q99935) Proline-rich protein 1 precursor (PRL1) (Ba... 34 0.28
3HBA_CHRPI (P13273) Hemoglobin alpha-A subunit (Hemoglobin alpha-... 33 0.48
4VNSM_INSV (Q01268) Nonstructural protein NS-M 33 0.62
5GNRP_HUMAN (Q13972) Guanine nucleotide-releasing protein (GNRP) ... 32 1.8
6PEVRA_PIG (Q863Y7) Endogenous retrovirus A receptor precursor 30 5.3
7GWT1_CANAL (Q873N2) GPI-anchored wall transfer protein 1 (EC 2.3... 30 5.3
8BAI3_MOUSE (Q80ZF8) Brain-specific angiogenesis inhibitor 3 prec... 30 5.3
9BAI3_HUMAN (O60242) Brain-specific angiogenesis inhibitor 3 prec... 30 5.3
10DACT1_HUMAN (Q9NYF0) Dapper homolog 1 (hDPR1) (Heptacellular car... 30 6.9
11Y3348_STRCO (Q9X8H1) Hypothetical protein SCO3348 29 9.0
12DDHD1_HUMAN (Q8NEL9) Probable phospholipase DDHD1 (EC 3.1.1.-) (... 29 9.0
13PEVR2_HUMAN (Q9NWF4) Porcine endogenous retrovirus A receptor 2 ... 29 9.0
14HBAA_GEONI (P83135) Hemoglobin alpha-A subunit (Hemoglobin alpha... 29 9.0

>A4_DROME (P14599) Beta-amyloid-like protein precursor|
          Length = 887

 Score = 34.7 bits (78), Expect = 0.21
 Identities = 26/91 (28%), Positives = 39/91 (42%)
 Frame = -2

Query: 435 KRQSRDCMWFLASESPTNASVLFPTRRKNLSASNRGRSHRLGCHRHLRNSKSGRPYFMQF 256
           KR++  C     +E P NA  +    +K L A ++ R+H L  +RHL N  SG P     
Sbjct: 497 KREAMTCYTQALTEQPPNAHHVEKCLQKLLRALHKDRAHALAHYRHLLN--SGGP----- 549

Query: 255 WCSWM*EHVSLV*CGGVSASGTHSPRKMSHL 163
                         GG+ A+ +  PR +  L
Sbjct: 550 --------------GGLEAAASERPRTLERL 566



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>PROL1_HUMAN (Q99935) Proline-rich protein 1 precursor (PRL1) (Basic|
           proline-rich lacrimal protein)
          Length = 201

 Score = 34.3 bits (77), Expect = 0.28
 Identities = 18/53 (33%), Positives = 25/53 (47%)
 Frame = +2

Query: 59  TVFLSALIILSYFTSVPYLSYSGLPYYRSYFSPLPKCDIFRGEWVPEADTPPH 217
           T FL  L ++S FT      +S  PY      P P   ++R  WVP +  PP+
Sbjct: 4   TFFLGLLALISCFTPSESQRFSRRPYLPGQLPPPP---LYRPRWVPPSPPPPY 53



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>HBA_CHRPI (P13273) Hemoglobin alpha-A subunit (Hemoglobin alpha-A chain)|
           (Alpha-A-globin)
          Length = 141

 Score = 33.5 bits (75), Expect = 0.48
 Identities = 27/114 (23%), Positives = 47/114 (41%), Gaps = 3/114 (2%)
 Frame = +2

Query: 224 NETCSYIQEHQNCMKYGRPDLEFLRWRWQPSRCDLPRFD---ADKFFRLVGNKTLAFVGD 394
           N+  ++++E      YG   LE +   +  ++   P FD        R  G K L  +G+
Sbjct: 15  NKVAAHVEE------YGAETLERMFTVYPQTKTYFPHFDLHHGSAQIRTHGKKVLTALGE 68

Query: 395 SLARNHMQSLLCLLSKVASPKEVTERTDPIKILHYERYNFTIKIIWSPFLVRTE 556
           ++  NH+  L   LSK++     T R DP+           +  I  P ++  E
Sbjct: 69  AV--NHIDDLASALSKLSDIHAQTLRVDPVNFKFLNHCFLVVVAIHQPSVLTPE 120



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>VNSM_INSV (Q01268) Nonstructural protein NS-M|
          Length = 303

 Score = 33.1 bits (74), Expect = 0.62
 Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
 Frame = +2

Query: 161 PKCDIFRGEW-VPEADTPPHYTNETCSYIQEHQNCMKYGRPDLEF--LRWRWQPSRCDLP 331
           P C +F   W +P+ +     T+E C  +Q H  C +  + D+ F  + + W    CD P
Sbjct: 175 PICFVFYLNWSIPKVNN----TSENC--VQLHLLCDQVYKKDVSFASVMYSWTKEFCDSP 228

Query: 332 RFDADK 349
           R D DK
Sbjct: 229 RADLDK 234



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>GNRP_HUMAN (Q13972) Guanine nucleotide-releasing protein (GNRP) (Ras-specific|
           nucleotide exchange factor CDC25) (Ras-specific guanine
           nucleotide-releasing factor)
          Length = 1275

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
 Frame = +2

Query: 347 KFFRLVGNKTLAFVGDSLARNHMQSLL--CLLSKVASPKEVTERTDPIKILHYERYNFT 517
           K+F L+ N    F  DS +R     LL  C+  +  SPK      +P++  HY   NF+
Sbjct: 42  KWFALLQNLLFYFESDSSSRPSGLYLLEGCVCDRAPSPKPALSAKEPLEKQHYFTVNFS 100



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>PEVRA_PIG (Q863Y7) Endogenous retrovirus A receptor precursor|
          Length = 446

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 5/67 (7%)
 Frame = +2

Query: 47  FVPATVFLSALIILSYFTSVPYLSYSGLPYYRSYF-----SPLPKCDIFRGEWVPEADTP 211
           F+  T  L+     S  T +P+LS    P+ RS+F     S L  C +  G+ V   + P
Sbjct: 114 FLALTFVLALACCASNVTYLPFLSRLPPPFLRSFFLGQGLSALLPCVLALGQGVGRLECP 173

Query: 212 PHYTNET 232
           P   N T
Sbjct: 174 PAPANGT 180



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>GWT1_CANAL (Q873N2) GPI-anchored wall transfer protein 1 (EC 2.3.-.-)|
           (Inositol acyltransferase GWT1)
          Length = 485

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 22/72 (30%), Positives = 33/72 (45%)
 Frame = +2

Query: 17  LTMVLLIKLLFVPATVFLSALIILSYFTSVPYLSYSGLPYYRSYFSPLPKCDIFRGEWVP 196
           L+  LL K L   A ++   L +L+   S+    YS  P Y  YF  +P   I+   +  
Sbjct: 36  LSFRLLKKSLGDLALIYDYILNVLTILASITV--YSNSPSYLHYFIVIPSLVIYLVNYHV 93

Query: 197 EADTPPHYTNET 232
           E  + PH  N+T
Sbjct: 94  EKPSSPHRQNDT 105



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>BAI3_MOUSE (Q80ZF8) Brain-specific angiogenesis inhibitor 3 precursor|
          Length = 1522

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 16/54 (29%), Positives = 27/54 (50%)
 Frame = -2

Query: 495 CSILMGSVLSVTSFGDATLDKRQSRDCMWFLASESPTNASVLFPTRRKNLSASN 334
           CS L+  V+   S+  + +  +   +C W L +  PT  S+     +K+LS SN
Sbjct: 30  CSTLVKGVI-YGSYSVSEMFPKNFTNCTWTLENPDPTKYSIYLKFSKKDLSCSN 82



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>BAI3_HUMAN (O60242) Brain-specific angiogenesis inhibitor 3 precursor|
          Length = 1522

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 16/54 (29%), Positives = 27/54 (50%)
 Frame = -2

Query: 495 CSILMGSVLSVTSFGDATLDKRQSRDCMWFLASESPTNASVLFPTRRKNLSASN 334
           CS L+  V+   S+  + +  +   +C W L +  PT  S+     +K+LS SN
Sbjct: 30  CSTLVKGVI-YGSYSVSEMFPKNFTNCTWTLENPDPTKYSIYLKFSKKDLSCSN 82



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>DACT1_HUMAN (Q9NYF0) Dapper homolog 1 (hDPR1) (Heptacellular carcinoma novel|
           gene 3 protein)
          Length = 836

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 14/29 (48%), Positives = 20/29 (68%)
 Frame = -1

Query: 367 PDETEELIGVKPREVAPARLPPPPQELQV 281
           P E+ +L G  P+E +P+R P PPQE +V
Sbjct: 475 PKESAQLSGASPKE-SPSRGPAPPQENKV 502



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>Y3348_STRCO (Q9X8H1) Hypothetical protein SCO3348|
          Length = 309

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 17/49 (34%), Positives = 25/49 (51%)
 Frame = +1

Query: 403 QEPHAVPTLPLVQGGVAEGGDREDGPHQDTALRALQLHHKNHLVAFPGE 549
           +EP A  +LPL  G +      +D PH D  +RAL+ H +  +    GE
Sbjct: 149 EEPDAAVSLPLGAGRLTAARLPDDPPHPDD-VRALRRHVRTEIARTVGE 196



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>DDHD1_HUMAN (Q8NEL9) Probable phospholipase DDHD1 (EC 3.1.1.-) (DDHD domain|
           protein 1) (Phosphatidic acid-preferring phospholipase
           A1 homolog) (PA-PLA1)
          Length = 900

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 13/44 (29%), Positives = 20/44 (45%)
 Frame = +2

Query: 137 YRSYFSPLPKCDIFRGEWVPEADTPPHYTNETCSYIQEHQNCMK 268
           Y  Y++   K  + RG+W  +    P    E+    QEH NC +
Sbjct: 274 YPVYWNQADKIPVMRGQWFIDGTWQPLEEEESNLIEQEHLNCFR 317



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>PEVR2_HUMAN (Q9NWF4) Porcine endogenous retrovirus A receptor 2 precursor|
           (PERV-A receptor 2) (Protein GPR172B)
          Length = 448

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 5/72 (6%)
 Frame = +2

Query: 32  LIKLLFVPATVFLSALIILSYFTSVPYLSYSGLPYYRSYF-----SPLPKCDIFRGEWVP 196
           L  + F+   + L+     S  T +P+LS+   P+ RS+F     S L  C +   + V 
Sbjct: 109 LHSVAFLTLALVLAMACCTSNVTFLPFLSHLPPPFLRSFFLGQGLSALLPCVLALVQGVG 168

Query: 197 EADTPPHYTNET 232
             + PP  TN T
Sbjct: 169 RLECPPAPTNGT 180



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>HBAA_GEONI (P83135) Hemoglobin alpha-A subunit (Hemoglobin alpha-A chain)|
           (Alpha-A-globin)
          Length = 141

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 3/76 (3%)
 Frame = +2

Query: 266 KYGRPDLEFLRWRWQPSRCDLPRFDA---DKFFRLVGNKTLAFVGDSLARNHMQSLLCLL 436
           +YG   LE L   +  ++   P FD        R  G K L+ +G+++  NH+  +   L
Sbjct: 23  EYGSETLERLFIVYPSTKTYFPHFDLHHDSAQVRAHGRKVLSALGEAV--NHIDDIPGAL 80

Query: 437 SKVASPKEVTERTDPI 484
           SK++     T R DP+
Sbjct: 81  SKLSDLHAQTLRVDPV 96


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 71,583,502
Number of Sequences: 219361
Number of extensions: 1444125
Number of successful extensions: 5191
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 4944
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5180
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5196311029
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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