ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart48e04 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_192402.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1182 Score = 295 bits (149), Expect = 9e-77 Identities = 456/556 (82%), Gaps = 23/556 (4%) Strand = Plus / Plus Query: 23 atggttctgctcatcaagcttctcttcgtccctgccaccgtgttcctctcggcgctcatc 82 |||||| || || ||||| | ||||||| ||| ||| |||||||||||||||||||| || Sbjct: 1 atggttttgttcttcaaggtgctcttcggcccggccgccgtgttcctctcggcgctcgtc 60 Query: 83 attctgtcctacttcaccagcgtgccctacct---------gagctactccggcctcccc 133 | || |||| ||||| |||||||| ||||| ||||| ||||| |||||| Sbjct: 61 gtcctctcctgcttcaagagcgtgccgtacctgagcaggatgagctcctccgagctcccc 120 Query: 134 tactacaggtcctacttc---tcgcccctccccaagtgcgacatcttccggggcgagtgg 190 | ||||| ||||||||| ||||| || |||||||||||||||||| ||| |||||| Sbjct: 121 tcctacatgtcctactttgagtcgccgatctccaagtgcgacatcttccagggggagtgg 180 Query: 191 gtcccggaagctgacacgccgccgcactacaccaacgaaacgtgctcctacatccaggag 250 || || || | | | ||||||| ||||||||| || |||||||||||||||||| Sbjct: 181 gtgcccgacg---agagctcgccgcagtacaccaacctgacctgctcctacatccaggag 237 Query: 251 caccagaactgcatgaagtacggccggccggacttggagttcctgaggtggcggtggcag 310 |||||||||||||||| ||| ||||| || ||| |||||||||| | |||||||||| || Sbjct: 238 caccagaactgcatgatgtatggccgccccgacctggagttcctcaagtggcggtggaag 297 Query: 311 ccgagccgg-tgcgacctcccgcggtttgacgccgataagttcttccgtctcgtcgggaa 369 ||| ||||| ||||||||||||||||| ||| | || |||||| |||| |||||||| || Sbjct: 298 ccg-gccggctgcgacctcccgcggttcgacccggacaagttcctccggctcgtcggcaa 356 Query: 370 caagacgctcgcgttcgtaggggactcactcgccaggaaccacatgcagtccctactctg 429 |||||||||||| ||||| |||||||| || || ||||||||||||||||| || ||||| Sbjct: 357 caagacgctcgctttcgtcggggactcgctggcgaggaaccacatgcagtctctcctctg 416 Query: 430 cctcttgtccaaggtggcgtcgccgaagga------ggtgacagagaggacggaccccat 483 |||| |||||||||| ||| |||||||||| |||||| | || ||||||||| Sbjct: 417 cctcctgtccaaggttgcgacgccgaaggacgtgtcggtgacggggaagacggacccgga 476 Query: 484 caagatactgcactacgagcgctacaacttcaccataaaaatcatctggtcgcctttcct 543 |||||||||| |||||||| | ||||||||||||||| | ||| |||||||||| ||||| Sbjct: 477 caagatactgtactacgaggggtacaacttcaccatacacatcttctggtcgccgttcct 536 Query: 544 ggtgaggacggaggag 559 |||||||||||||||| Sbjct: 537 ggtgaggacggaggag 552
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 224 bits (113), Expect = 3e-55 Identities = 358/437 (81%), Gaps = 17/437 (3%) Strand = Plus / Minus Query: 21 ccatggttctgctcatcaagcttctcttcgtccctgccaccgtgttcctctcggcgctca 80 |||||||| || || ||||| | ||||||| ||| ||| |||||||||||||||||||| Sbjct: 26409442 ccatggttttgttcttcaaggtgctcttcggcccggccgccgtgttcctctcggcgctcg 26409383 Query: 81 tcattctgtcctacttcaccagcgtgccctacct---------gagctactccggcctcc 131 || | || |||| ||||| |||||||| ||||| ||||| ||||| |||| Sbjct: 26409382 tcgtcctctcctgcttcaagagcgtgccgtacctgagcaggatgagctcctccgagctcc 26409323 Query: 132 cctactacaggtcctacttc---tcgcccctccccaagtgcgacatcttccggggcgagt 188 ||| ||||| ||||||||| ||||| || |||||||||||||||||| ||| |||| Sbjct: 26409322 cctcctacatgtcctactttgagtcgccgatctccaagtgcgacatcttccagggggagt 26409263 Query: 189 gggtcccggaagctgacacgccgccgcactacaccaacgaaacgtgctcctacatccagg 248 |||| || || | | | ||||||| ||||||||| || |||||||||||||||| Sbjct: 26409262 gggtgcccgacg---agagctcgccgcagtacaccaacctgacctgctcctacatccagg 26409206 Query: 249 agcaccagaactgcatgaagtacggccggccggacttggagttcctgaggtggcggtggc 308 |||||||||||||||||| ||| ||||| || ||| |||||||||| | |||||||||| Sbjct: 26409205 agcaccagaactgcatgatgtatggccgccccgacctggagttcctcaagtggcggtgga 26409146 Query: 309 agccgagccgg-tgcgacctcccgcggtttgacgccgataagttcttccgtctcgtcggg 367 ||||| ||||| ||||||||||||||||| ||| | || |||||| |||| |||||||| Sbjct: 26409145 agccg-gccggctgcgacctcccgcggttcgacccggacaagttcctccggctcgtcggc 26409087 Query: 368 aacaagacgctcgcgttcgtaggggactcactcgccaggaaccacatgcagtccctactc 427 |||||||||||||| ||||| |||||||| || || ||||||||||||||||| || ||| Sbjct: 26409086 aacaagacgctcgctttcgtcggggactcgctggcgaggaaccacatgcagtctctcctc 26409027 Query: 428 tgcctcttgtccaaggt 444 |||||| |||||||||| Sbjct: 26409026 tgcctcctgtccaaggt 26409010 Score = 95.6 bits (48), Expect = 2e-16 Identities = 69/76 (90%) Strand = Plus / Minus Query: 484 caagatactgcactacgagcgctacaacttcaccataaaaatcatctggtcgcctttcct 543 |||||||||| |||||||| | ||||||||||||||| | ||| |||||||||| ||||| Sbjct: 26408864 caagatactgtactacgaggggtacaacttcaccatacacatcttctggtcgccgttcct 26408805 Query: 544 ggtgaggacggaggag 559 |||||||||||||||| Sbjct: 26408804 ggtgaggacggaggag 26408789 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Minus Query: 242 atccaggagcaccagaactgcatgaagtacggccggccggacttggagttcctgaggtgg 301 ||||||||||||||||||||| | ||||||||||| || ||| | || ||||| | |||| Sbjct: 26396240 atccaggagcaccagaactgcctcaagtacggccgccccgacctcgaattcctcaagtgg 26396181 Query: 302 cggtggc 308 ||||||| Sbjct: 26396180 cggtggc 26396174 Score = 48.1 bits (24), Expect = 0.033 Identities = 30/32 (93%) Strand = Plus / Minus Query: 167 tgcgacatcttccggggcgagtgggtcccgga 198 |||||||||||||| ||||||||||| ||||| Sbjct: 26396312 tgcgacatcttccgcggcgagtgggtgccgga 26396281 Score = 42.1 bits (21), Expect = 2.1 Identities = 54/65 (83%) Strand = Plus / Minus Query: 369 acaagacgctcgcgttcgtaggggactcactcgccaggaaccacatgcagtccctactct 428 ||||| ||||||| ||||| || ||||| || || | ||||||||||| ||||| |||| Sbjct: 26396113 acaagtcgctcgccttcgtcggtgactcgctggctcgcaaccacatgcaatccctgctct 26396054 Query: 429 gcctc 433 ||||| Sbjct: 26396053 gcctc 26396049
>dbj|AP003710.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBb0032K15 Length = 126195 Score = 224 bits (113), Expect = 3e-55 Identities = 358/437 (81%), Gaps = 17/437 (3%) Strand = Plus / Minus Query: 21 ccatggttctgctcatcaagcttctcttcgtccctgccaccgtgttcctctcggcgctca 80 |||||||| || || ||||| | ||||||| ||| ||| |||||||||||||||||||| Sbjct: 83307 ccatggttttgttcttcaaggtgctcttcggcccggccgccgtgttcctctcggcgctcg 83248 Query: 81 tcattctgtcctacttcaccagcgtgccctacct---------gagctactccggcctcc 131 || | || |||| ||||| |||||||| ||||| ||||| ||||| |||| Sbjct: 83247 tcgtcctctcctgcttcaagagcgtgccgtacctgagcaggatgagctcctccgagctcc 83188 Query: 132 cctactacaggtcctacttc---tcgcccctccccaagtgcgacatcttccggggcgagt 188 ||| ||||| ||||||||| ||||| || |||||||||||||||||| ||| |||| Sbjct: 83187 cctcctacatgtcctactttgagtcgccgatctccaagtgcgacatcttccagggggagt 83128 Query: 189 gggtcccggaagctgacacgccgccgcactacaccaacgaaacgtgctcctacatccagg 248 |||| || || | | | ||||||| ||||||||| || |||||||||||||||| Sbjct: 83127 gggtgcccgacg---agagctcgccgcagtacaccaacctgacctgctcctacatccagg 83071 Query: 249 agcaccagaactgcatgaagtacggccggccggacttggagttcctgaggtggcggtggc 308 |||||||||||||||||| ||| ||||| || ||| |||||||||| | |||||||||| Sbjct: 83070 agcaccagaactgcatgatgtatggccgccccgacctggagttcctcaagtggcggtgga 83011 Query: 309 agccgagccgg-tgcgacctcccgcggtttgacgccgataagttcttccgtctcgtcggg 367 ||||| ||||| ||||||||||||||||| ||| | || |||||| |||| |||||||| Sbjct: 83010 agccg-gccggctgcgacctcccgcggttcgacccggacaagttcctccggctcgtcggc 82952 Query: 368 aacaagacgctcgcgttcgtaggggactcactcgccaggaaccacatgcagtccctactc 427 |||||||||||||| ||||| |||||||| || || ||||||||||||||||| || ||| Sbjct: 82951 aacaagacgctcgctttcgtcggggactcgctggcgaggaaccacatgcagtctctcctc 82892 Query: 428 tgcctcttgtccaaggt 444 |||||| |||||||||| Sbjct: 82891 tgcctcctgtccaaggt 82875 Score = 95.6 bits (48), Expect = 2e-16 Identities = 69/76 (90%) Strand = Plus / Minus Query: 484 caagatactgcactacgagcgctacaacttcaccataaaaatcatctggtcgcctttcct 543 |||||||||| |||||||| | ||||||||||||||| | ||| |||||||||| ||||| Sbjct: 82729 caagatactgtactacgaggggtacaacttcaccatacacatcttctggtcgccgttcct 82670 Query: 544 ggtgaggacggaggag 559 |||||||||||||||| Sbjct: 82669 ggtgaggacggaggag 82654 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Minus Query: 242 atccaggagcaccagaactgcatgaagtacggccggccggacttggagttcctgaggtgg 301 ||||||||||||||||||||| | ||||||||||| || ||| | || ||||| | |||| Sbjct: 70105 atccaggagcaccagaactgcctcaagtacggccgccccgacctcgaattcctcaagtgg 70046 Query: 302 cggtggc 308 ||||||| Sbjct: 70045 cggtggc 70039 Score = 48.1 bits (24), Expect = 0.033 Identities = 30/32 (93%) Strand = Plus / Minus Query: 167 tgcgacatcttccggggcgagtgggtcccgga 198 |||||||||||||| ||||||||||| ||||| Sbjct: 70177 tgcgacatcttccgcggcgagtgggtgccgga 70146 Score = 42.1 bits (21), Expect = 2.1 Identities = 54/65 (83%) Strand = Plus / Minus Query: 369 acaagacgctcgcgttcgtaggggactcactcgccaggaaccacatgcagtccctactct 428 ||||| ||||||| ||||| || ||||| || || | ||||||||||| ||||| |||| Sbjct: 69978 acaagtcgctcgccttcgtcggtgactcgctggctcgcaaccacatgcaatccctgctct 69919 Query: 429 gcctc 433 ||||| Sbjct: 69918 gcctc 69914
>dbj|AP003709.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBb0006H05 Length = 154821 Score = 224 bits (113), Expect = 3e-55 Identities = 358/437 (81%), Gaps = 17/437 (3%) Strand = Plus / Minus Query: 21 ccatggttctgctcatcaagcttctcttcgtccctgccaccgtgttcctctcggcgctca 80 |||||||| || || ||||| | ||||||| ||| ||| |||||||||||||||||||| Sbjct: 18061 ccatggttttgttcttcaaggtgctcttcggcccggccgccgtgttcctctcggcgctcg 18002 Query: 81 tcattctgtcctacttcaccagcgtgccctacct---------gagctactccggcctcc 131 || | || |||| ||||| |||||||| ||||| ||||| ||||| |||| Sbjct: 18001 tcgtcctctcctgcttcaagagcgtgccgtacctgagcaggatgagctcctccgagctcc 17942 Query: 132 cctactacaggtcctacttc---tcgcccctccccaagtgcgacatcttccggggcgagt 188 ||| ||||| ||||||||| ||||| || |||||||||||||||||| ||| |||| Sbjct: 17941 cctcctacatgtcctactttgagtcgccgatctccaagtgcgacatcttccagggggagt 17882 Query: 189 gggtcccggaagctgacacgccgccgcactacaccaacgaaacgtgctcctacatccagg 248 |||| || || | | | ||||||| ||||||||| || |||||||||||||||| Sbjct: 17881 gggtgcccgacg---agagctcgccgcagtacaccaacctgacctgctcctacatccagg 17825 Query: 249 agcaccagaactgcatgaagtacggccggccggacttggagttcctgaggtggcggtggc 308 |||||||||||||||||| ||| ||||| || ||| |||||||||| | |||||||||| Sbjct: 17824 agcaccagaactgcatgatgtatggccgccccgacctggagttcctcaagtggcggtgga 17765 Query: 309 agccgagccgg-tgcgacctcccgcggtttgacgccgataagttcttccgtctcgtcggg 367 ||||| ||||| ||||||||||||||||| ||| | || |||||| |||| |||||||| Sbjct: 17764 agccg-gccggctgcgacctcccgcggttcgacccggacaagttcctccggctcgtcggc 17706 Query: 368 aacaagacgctcgcgttcgtaggggactcactcgccaggaaccacatgcagtccctactc 427 |||||||||||||| ||||| |||||||| || || ||||||||||||||||| || ||| Sbjct: 17705 aacaagacgctcgctttcgtcggggactcgctggcgaggaaccacatgcagtctctcctc 17646 Query: 428 tgcctcttgtccaaggt 444 |||||| |||||||||| Sbjct: 17645 tgcctcctgtccaaggt 17629 Score = 95.6 bits (48), Expect = 2e-16 Identities = 69/76 (90%) Strand = Plus / Minus Query: 484 caagatactgcactacgagcgctacaacttcaccataaaaatcatctggtcgcctttcct 543 |||||||||| |||||||| | ||||||||||||||| | ||| |||||||||| ||||| Sbjct: 17483 caagatactgtactacgaggggtacaacttcaccatacacatcttctggtcgccgttcct 17424 Query: 544 ggtgaggacggaggag 559 |||||||||||||||| Sbjct: 17423 ggtgaggacggaggag 17408 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Minus Query: 242 atccaggagcaccagaactgcatgaagtacggccggccggacttggagttcctgaggtgg 301 ||||||||||||||||||||| | ||||||||||| || ||| | || ||||| | |||| Sbjct: 4859 atccaggagcaccagaactgcctcaagtacggccgccccgacctcgaattcctcaagtgg 4800 Query: 302 cggtggc 308 ||||||| Sbjct: 4799 cggtggc 4793 Score = 48.1 bits (24), Expect = 0.033 Identities = 30/32 (93%) Strand = Plus / Minus Query: 167 tgcgacatcttccggggcgagtgggtcccgga 198 |||||||||||||| ||||||||||| ||||| Sbjct: 4931 tgcgacatcttccgcggcgagtgggtgccgga 4900 Score = 42.1 bits (21), Expect = 2.1 Identities = 54/65 (83%) Strand = Plus / Minus Query: 369 acaagacgctcgcgttcgtaggggactcactcgccaggaaccacatgcagtccctactct 428 ||||| ||||||| ||||| || ||||| || || | ||||||||||| ||||| |||| Sbjct: 4732 acaagtcgctcgccttcgtcggtgactcgctggctcgcaaccacatgcaatccctgctct 4673 Query: 429 gcctc 433 ||||| Sbjct: 4672 gcctc 4668
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 97.6 bits (49), Expect = 4e-17 Identities = 88/101 (87%) Strand = Plus / Plus Query: 242 atccaggagcaccagaactgcatgaagtacggccggccggacttggagttcctgaggtgg 301 |||||||||||||||||||||||||||||||| |||||||| | | ||||||| ||||| Sbjct: 9232657 atccaggagcaccagaactgcatgaagtacgggaggccggacctcgggttcctgcggtgg 9232716 Query: 302 cggtggcagccgagccggtgcgacctcccgcggtttgacgc 342 ||||||| |||| |||||||| || |||||||| ||||| Sbjct: 9232717 cggtggcggccggagcggtgcgagctgccgcggttcgacgc 9232757 Score = 81.8 bits (41), Expect = 2e-12 Identities = 86/101 (85%) Strand = Plus / Minus Query: 242 atccaggagcaccagaactgcatgaagtacggccggccggacttggagttcctgaggtgg 301 |||||||||||||||||||||||||||||||| |||| ||| | | |||||| ||||| Sbjct: 9220009 atccaggagcaccagaactgcatgaagtacgggaggcccgacctcgggttcctccggtgg 9219950 Query: 302 cggtggcagccgagccggtgcgacctcccgcggtttgacgc 342 ||||||| |||| || ||||| ||||||||||| ||||| Sbjct: 9219949 cggtggcggccggagcgctgcgagctcccgcggttcgacgc 9219909 Score = 73.8 bits (37), Expect = 6e-10 Identities = 85/101 (84%) Strand = Plus / Plus Query: 242 atccaggagcaccagaactgcatgaagtacggccggccggacttggagttcctgaggtgg 301 ||||||||||||||||||||||||||||||||||| || ||| | | ||||| ||||| Sbjct: 9257926 atccaggagcaccagaactgcatgaagtacggccgccccgacctcggcttcctccggtgg 9257985 Query: 302 cggtggcagccgagccggtgcgacctcccgcggtttgacgc 342 ||||||| ||| || ||||| ||||||||||| ||||| Sbjct: 9257986 cggtggcgcccggagcgctgcgagctcccgcggttcgacgc 9258026 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 380 gcgttcgtaggggactcactcgccaggaaccacatgcagtccctactctgcctcttgtcc 439 |||||||| || ||||| |||||||||||||| ||||||||||| | |||||| | ||| Sbjct: 9232795 gcgttcgtcggcgactcgctcgccaggaaccatatgcagtccctcatgtgcctcctctcc 9232854 Query: 440 aaggt 444 ||||| Sbjct: 9232855 aaggt 9232859 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Minus Query: 380 gcgttcgtaggggactcactcgccaggaaccacatgcagtc 420 |||||||| || ||||| |||||||||||||| |||||||| Sbjct: 9219871 gcgttcgtcggagactcgctcgccaggaaccatatgcagtc 9219831 Score = 46.1 bits (23), Expect = 0.13 Identities = 80/99 (80%) Strand = Plus / Plus Query: 210 cgccgcactacaccaacgaaacgtgctcctacatccaggagcaccagaactgcatgaagt 269 ||||| |||||||||||| |||||| | ||||||| | ||||||||||||||||| Sbjct: 9265113 cgccgtactacaccaacgcgacgtgcgggttcatccagaactaccagaactgcatgaagc 9265172 Query: 270 acggccggccggacttggagttcctgaggtggcggtggc 308 |||| |||| | |||||||| || |||||||||||| Sbjct: 9265173 acgggaggcccagcatggagttcttgcggtggcggtggc 9265211 Score = 46.1 bits (23), Expect = 0.13 Identities = 50/59 (84%) Strand = Plus / Plus Query: 216 actacaccaacgaaacgtgctcctacatccaggagcaccagaactgcatgaagtacggc 274 ||||||||||||| || ||||| | |||||| |||||| | |||| |||||||||||| Sbjct: 8836557 actacaccaacgacacctgctcgttcatccacgagcactatgactgtatgaagtacggc 8836615 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 167 tgcgacatcttccggggcgagtgggt 192 |||||||||||||| ||||||||||| Sbjct: 9257839 tgcgacatcttccgcggcgagtgggt 9257864 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 167 tgcgacatcttccggggcgagtgggt 192 |||||||||||||| ||||||||||| Sbjct: 9232567 tgcgacatcttccgcggcgagtgggt 9232592 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Minus Query: 167 tgcgacatcttccggggcgagtgggt 192 |||||||||||||| ||||||||||| Sbjct: 9220090 tgcgacatcttccgcggcgagtgggt 9220065 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Minus Query: 299 tggcggtggcagccgagccggtgcgacctcccg 331 |||||||||| |||| | ||||||||||||||| Sbjct: 7055654 tggcggtggcggccgcggcggtgcgacctcccg 7055622
>dbj|AP003491.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0662B01 Length = 155913 Score = 97.6 bits (49), Expect = 4e-17 Identities = 88/101 (87%) Strand = Plus / Plus Query: 242 atccaggagcaccagaactgcatgaagtacggccggccggacttggagttcctgaggtgg 301 |||||||||||||||||||||||||||||||| |||||||| | | ||||||| ||||| Sbjct: 126679 atccaggagcaccagaactgcatgaagtacgggaggccggacctcgggttcctgcggtgg 126738 Query: 302 cggtggcagccgagccggtgcgacctcccgcggtttgacgc 342 ||||||| |||| |||||||| || |||||||| ||||| Sbjct: 126739 cggtggcggccggagcggtgcgagctgccgcggttcgacgc 126779 Score = 81.8 bits (41), Expect = 2e-12 Identities = 86/101 (85%) Strand = Plus / Minus Query: 242 atccaggagcaccagaactgcatgaagtacggccggccggacttggagttcctgaggtgg 301 |||||||||||||||||||||||||||||||| |||| ||| | | |||||| ||||| Sbjct: 114031 atccaggagcaccagaactgcatgaagtacgggaggcccgacctcgggttcctccggtgg 113972 Query: 302 cggtggcagccgagccggtgcgacctcccgcggtttgacgc 342 ||||||| |||| || ||||| ||||||||||| ||||| Sbjct: 113971 cggtggcggccggagcgctgcgagctcccgcggttcgacgc 113931 Score = 73.8 bits (37), Expect = 6e-10 Identities = 85/101 (84%) Strand = Plus / Plus Query: 242 atccaggagcaccagaactgcatgaagtacggccggccggacttggagttcctgaggtgg 301 ||||||||||||||||||||||||||||||||||| || ||| | | ||||| ||||| Sbjct: 151948 atccaggagcaccagaactgcatgaagtacggccgccccgacctcggcttcctccggtgg 152007 Query: 302 cggtggcagccgagccggtgcgacctcccgcggtttgacgc 342 ||||||| ||| || ||||| ||||||||||| ||||| Sbjct: 152008 cggtggcgcccggagcgctgcgagctcccgcggttcgacgc 152048 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 380 gcgttcgtaggggactcactcgccaggaaccacatgcagtccctactctgcctcttgtcc 439 |||||||| || ||||| |||||||||||||| ||||||||||| | |||||| | ||| Sbjct: 126817 gcgttcgtcggcgactcgctcgccaggaaccatatgcagtccctcatgtgcctcctctcc 126876 Query: 440 aaggt 444 ||||| Sbjct: 126877 aaggt 126881 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Minus Query: 380 gcgttcgtaggggactcactcgccaggaaccacatgcagtc 420 |||||||| || ||||| |||||||||||||| |||||||| Sbjct: 113893 gcgttcgtcggagactcgctcgccaggaaccatatgcagtc 113853 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 167 tgcgacatcttccggggcgagtgggt 192 |||||||||||||| ||||||||||| Sbjct: 151861 tgcgacatcttccgcggcgagtgggt 151886 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 167 tgcgacatcttccggggcgagtgggt 192 |||||||||||||| ||||||||||| Sbjct: 126589 tgcgacatcttccgcggcgagtgggt 126614 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Minus Query: 167 tgcgacatcttccggggcgagtgggt 192 |||||||||||||| ||||||||||| Sbjct: 114112 tgcgacatcttccgcggcgagtgggt 114087
>dbj|AP005813.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0676F10 Length = 142510 Score = 91.7 bits (46), Expect = 2e-15 Identities = 85/98 (86%) Strand = Plus / Plus Query: 245 caggagcaccagaactgcatgaagtacggccggccggacttggagttcctgaggtggcgg 304 ||||||||||||||||||||||||||||| |||||||| | | ||||||| |||||||| Sbjct: 1 caggagcaccagaactgcatgaagtacgggaggccggacctcgggttcctgcggtggcgg 60 Query: 305 tggcagccgagccggtgcgacctcccgcggtttgacgc 342 |||| |||| |||||||| || |||||||| ||||| Sbjct: 61 tggcggccggagcggtgcgagctgccgcggttcgacgc 98 Score = 73.8 bits (37), Expect = 6e-10 Identities = 85/101 (84%) Strand = Plus / Plus Query: 242 atccaggagcaccagaactgcatgaagtacggccggccggacttggagttcctgaggtgg 301 ||||||||||||||||||||||||||||||||||| || ||| | | ||||| ||||| Sbjct: 25267 atccaggagcaccagaactgcatgaagtacggccgccccgacctcggcttcctccggtgg 25326 Query: 302 cggtggcagccgagccggtgcgacctcccgcggtttgacgc 342 ||||||| ||| || ||||| ||||||||||| ||||| Sbjct: 25327 cggtggcgcccggagcgctgcgagctcccgcggttcgacgc 25367 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 380 gcgttcgtaggggactcactcgccaggaaccacatgcagtccctactctgcctcttgtcc 439 |||||||| || ||||| |||||||||||||| ||||||||||| | |||||| | ||| Sbjct: 136 gcgttcgtcggcgactcgctcgccaggaaccatatgcagtccctcatgtgcctcctctcc 195 Query: 440 aaggt 444 ||||| Sbjct: 196 aaggt 200 Score = 46.1 bits (23), Expect = 0.13 Identities = 80/99 (80%) Strand = Plus / Plus Query: 210 cgccgcactacaccaacgaaacgtgctcctacatccaggagcaccagaactgcatgaagt 269 ||||| |||||||||||| |||||| | ||||||| | ||||||||||||||||| Sbjct: 32454 cgccgtactacaccaacgcgacgtgcgggttcatccagaactaccagaactgcatgaagc 32513 Query: 270 acggccggccggacttggagttcctgaggtggcggtggc 308 |||| |||| | |||||||| || |||||||||||| Sbjct: 32514 acgggaggcccagcatggagttcttgcggtggcggtggc 32552 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 167 tgcgacatcttccggggcgagtgggt 192 |||||||||||||| ||||||||||| Sbjct: 25180 tgcgacatcttccgcggcgagtgggt 25205
>ref|NM_185776.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1221 Score = 73.8 bits (37), Expect = 6e-10 Identities = 85/101 (84%) Strand = Plus / Plus Query: 242 atccaggagcaccagaactgcatgaagtacggccggccggacttggagttcctgaggtgg 301 ||||||||||||||||||||||||||||||||||| || ||| | | ||||| ||||| Sbjct: 253 atccaggagcaccagaactgcatgaagtacggccgccccgacctcggcttcctccggtgg 312 Query: 302 cggtggcagccgagccggtgcgacctcccgcggtttgacgc 342 ||||||| ||| || ||||| ||||||||||| ||||| Sbjct: 313 cggtggcgcccggagcgctgcgagctcccgcggttcgacgc 353 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 167 tgcgacatcttccggggcgagtgggt 192 |||||||||||||| ||||||||||| Sbjct: 166 tgcgacatcttccgcggcgagtgggt 191
>dbj|AK108774.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-150-H10, full insert sequence Length = 1510 Score = 73.8 bits (37), Expect = 6e-10 Identities = 85/101 (84%) Strand = Plus / Minus Query: 242 atccaggagcaccagaactgcatgaagtacggccggccggacttggagttcctgaggtgg 301 ||||||||||||||||||||||||||||||||||| || ||| | | ||||| ||||| Sbjct: 979 atccaggagcaccagaactgcatgaagtacggccgccccgacctcggcttcctccggtgg 920 Query: 302 cggtggcagccgagccggtgcgacctcccgcggtttgacgc 342 ||||||| ||| || ||||| ||||||||||| ||||| Sbjct: 919 cggtggcgcccggagcgctgcgagctcccgcggttcgacgc 879
>dbj|AK106309.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-101-D01, full insert sequence Length = 1584 Score = 73.8 bits (37), Expect = 6e-10 Identities = 85/101 (84%) Strand = Plus / Plus Query: 242 atccaggagcaccagaactgcatgaagtacggccggccggacttggagttcctgaggtgg 301 ||||||||||||||||||||||||||||||||||| || ||| | | ||||| ||||| Sbjct: 399 atccaggagcaccagaactgcatgaagtacggccgccccgacctcggcttcctccggtgg 458 Query: 302 cggtggcagccgagccggtgcgacctcccgcggtttgacgc 342 ||||||| ||| || ||||| ||||||||||| ||||| Sbjct: 459 cggtggcgcccggagcgctgcgagctcccgcggttcgacgc 499 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 167 tgcgacatcttccggggcgagtgggt 192 |||||||||||||| ||||||||||| Sbjct: 312 tgcgacatcttccgcggcgagtgggt 337
>gb|AC158191.2| Selaginella moellendorffii clone JGIASXY-5N22, complete sequence Length = 30068 Score = 63.9 bits (32), Expect = 6e-07 Identities = 65/76 (85%) Strand = Plus / Minus Query: 207 cgccgccgcactacaccaacgaaacgtgctcctacatccaggagcaccagaactgcatga 266 ||||||||| |||||||||||| || ||| ||||||||||| || ||||||||| | | Sbjct: 17521 cgccgccgctctacaccaacgagacctgccgctacatccagggccatcagaactgcctca 17462 Query: 267 agtacggccggccgga 282 || ||||||||||||| Sbjct: 17461 agaacggccggccgga 17446
>ref|NM_192398.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1215 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Plus Query: 242 atccaggagcaccagaactgcatgaagtacggccggccggacttggagttcctgaggtgg 301 ||||||||||||||||||||| | ||||||||||| || ||| | || ||||| | |||| Sbjct: 247 atccaggagcaccagaactgcctcaagtacggccgccccgacctcgaattcctcaagtgg 306 Query: 302 cggtggc 308 ||||||| Sbjct: 307 cggtggc 313 Score = 50.1 bits (25), Expect = 0.008 Identities = 67/81 (82%) Strand = Plus / Plus Query: 369 acaagacgctcgcgttcgtaggggactcactcgccaggaaccacatgcagtccctactct 428 ||||| ||||||| ||||| || ||||| || || | ||||||||||| ||||| |||| Sbjct: 374 acaagtcgctcgccttcgtcggtgactcgctggctcgcaaccacatgcaatccctgctct 433 Query: 429 gcctcttgtccaaggtggcgt 449 ||||| | ||| ||||||||| Sbjct: 434 gcctcctctcccaggtggcgt 454 Score = 48.1 bits (24), Expect = 0.033 Identities = 30/32 (93%) Strand = Plus / Plus Query: 167 tgcgacatcttccggggcgagtgggtcccgga 198 |||||||||||||| ||||||||||| ||||| Sbjct: 175 tgcgacatcttccgcggcgagtgggtgccgga 206
>dbj|AK104312.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-018-G10, full insert sequence Length = 1686 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Plus Query: 242 atccaggagcaccagaactgcatgaagtacggccggccggacttggagttcctgaggtgg 301 ||||||||||||||||||||| | ||||||||||| || ||| | || ||||| | |||| Sbjct: 494 atccaggagcaccagaactgcctcaagtacggccgccccgacctcgaattcctcaagtgg 553 Query: 302 cggtggc 308 ||||||| Sbjct: 554 cggtggc 560 Score = 50.1 bits (25), Expect = 0.008 Identities = 67/81 (82%) Strand = Plus / Plus Query: 369 acaagacgctcgcgttcgtaggggactcactcgccaggaaccacatgcagtccctactct 428 ||||| ||||||| ||||| || ||||| || || | ||||||||||| ||||| |||| Sbjct: 621 acaagtcgctcgccttcgtcggtgactcgctggctcgcaaccacatgcaatccctgctct 680 Query: 429 gcctcttgtccaaggtggcgt 449 ||||| | ||| ||||||||| Sbjct: 681 gcctcctctcccaggtggcgt 701 Score = 48.1 bits (24), Expect = 0.033 Identities = 30/32 (93%) Strand = Plus / Plus Query: 167 tgcgacatcttccggggcgagtgggtcccgga 198 |||||||||||||| ||||||||||| ||||| Sbjct: 422 tgcgacatcttccgcggcgagtgggtgccgga 453
>dbj|AK103547.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033132E17, full insert sequence Length = 1574 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Plus Query: 242 atccaggagcaccagaactgcatgaagtacggccggccggacttggagttcctgaggtgg 301 ||||||||||||||||||||| | ||||||||||| || ||| | || ||||| | |||| Sbjct: 495 atccaggagcaccagaactgcctcaagtacggccgccccgacctcgaattcctcaagtgg 554 Query: 302 cggtggc 308 ||||||| Sbjct: 555 cggtggc 561 Score = 50.1 bits (25), Expect = 0.008 Identities = 67/81 (82%) Strand = Plus / Plus Query: 369 acaagacgctcgcgttcgtaggggactcactcgccaggaaccacatgcagtccctactct 428 ||||| ||||||| ||||| || ||||| || || | ||||||||||| ||||| |||| Sbjct: 622 acaagtcgctcgccttcgtcggtgactcgctggctcgcaaccacatgcaatccctgctct 681 Query: 429 gcctcttgtccaaggtggcgt 449 ||||| | ||| ||||||||| Sbjct: 682 gcctcctctcccaggtggcgt 702 Score = 48.1 bits (24), Expect = 0.033 Identities = 30/32 (93%) Strand = Plus / Plus Query: 167 tgcgacatcttccggggcgagtgggtcccgga 198 |||||||||||||| ||||||||||| ||||| Sbjct: 423 tgcgacatcttccgcggcgagtgggtgccgga 454
>dbj|AK061145.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-208-D04, full insert sequence Length = 1741 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Plus Query: 242 atccaggagcaccagaactgcatgaagtacggccggccggacttggagttcctgaggtgg 301 ||||||||||||||||||||| | ||||||||||| || ||| | || ||||| | |||| Sbjct: 496 atccaggagcaccagaactgcctcaagtacggccgccccgacctcgaattcctcaagtgg 555 Query: 302 cggtggc 308 ||||||| Sbjct: 556 cggtggc 562 Score = 50.1 bits (25), Expect = 0.008 Identities = 67/81 (82%) Strand = Plus / Plus Query: 369 acaagacgctcgcgttcgtaggggactcactcgccaggaaccacatgcagtccctactct 428 ||||| ||||||| ||||| || ||||| || || | ||||||||||| ||||| |||| Sbjct: 623 acaagtcgctcgccttcgtcggtgactcgctggctcgcaaccacatgcaatccctgctct 682 Query: 429 gcctcttgtccaaggtggcgt 449 ||||| | ||| ||||||||| Sbjct: 683 gcctcctctcccaggtggcgt 703 Score = 48.1 bits (24), Expect = 0.033 Identities = 30/32 (93%) Strand = Plus / Plus Query: 167 tgcgacatcttccggggcgagtgggtcccgga 198 |||||||||||||| ||||||||||| ||||| Sbjct: 424 tgcgacatcttccgcggcgagtgggtgccgga 455
>gb|AY109934.1| Zea mays CL64932_1 mRNA sequence Length = 984 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Plus Query: 242 atccaggagcaccagaactgcatgaagtacggccggccggacttggagttcctgaggtgg 301 ||||||||||||||||||||| | ||||||||||| || ||| ||| ||||| | |||| Sbjct: 292 atccaggagcaccagaactgcctcaagtacggccgccccgacctgggcttcctcaagtgg 351 Query: 302 cggtggc 308 ||||||| Sbjct: 352 cggtggc 358 Score = 54.0 bits (27), Expect = 5e-04 Identities = 57/67 (85%) Strand = Plus / Plus Query: 383 ttcgtaggggactcactcgccaggaaccacatgcagtccctactctgcctcttgtccaag 442 ||||| |||||||| || || |||||||||||||||| || ||||||||| |||| || Sbjct: 433 ttcgtcggggactcgctggcgcggaaccacatgcagtcgctgctctgcctcctgtcacag 492 Query: 443 gtggcgt 449 ||||||| Sbjct: 493 gtggcgt 499 Score = 48.1 bits (24), Expect = 0.033 Identities = 30/32 (93%) Strand = Plus / Plus Query: 167 tgcgacatcttccggggcgagtgggtcccgga 198 |||||||||||||| ||||||||||| ||||| Sbjct: 220 tgcgacatcttccgcggcgagtgggtgccgga 251
>ref|XM_467595.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1551 Score = 58.0 bits (29), Expect = 3e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 380 gcgttcgtaggggactcactcgccaggaaccacatgcagtccctactctgcctcttgtcc 439 |||||||| || ||||| ||||||||||||||| | |||| | || |||||||||||| Sbjct: 703 gcgttcgtcggcgactcgctcgccaggaaccacttcaagtctttgctgtgcctcttgtcc 762 Query: 440 aaggtggcg 448 ||||||||| Sbjct: 763 aaggtggcg 771 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 251 caccagaactgcatgaagtacggc 274 ||||||||||||||||||| |||| Sbjct: 574 caccagaactgcatgaagttcggc 597
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Plus Query: 380 gcgttcgtaggggactcactcgccaggaaccacatgcagtccctactctgcctcttgtcc 439 |||||||| || ||||| ||||||||||||||| | |||| | || |||||||||||| Sbjct: 30361907 gcgttcgtcggcgactcgctcgccaggaaccacttcaagtctttgctgtgcctcttgtcc 30361966 Query: 440 aaggtg 445 |||||| Sbjct: 30361967 aaggtg 30361972 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 251 caccagaactgcatgaagtacggc 274 ||||||||||||||||||| |||| Sbjct: 30361778 caccagaactgcatgaagttcggc 30361801
>dbj|AP005751.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0072H09 Length = 160541 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Plus Query: 380 gcgttcgtaggggactcactcgccaggaaccacatgcagtccctactctgcctcttgtcc 439 |||||||| || ||||| ||||||||||||||| | |||| | || |||||||||||| Sbjct: 42767 gcgttcgtcggcgactcgctcgccaggaaccacttcaagtctttgctgtgcctcttgtcc 42826 Query: 440 aaggtg 445 |||||| Sbjct: 42827 aaggtg 42832 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 251 caccagaactgcatgaagtacggc 274 ||||||||||||||||||| |||| Sbjct: 42638 caccagaactgcatgaagttcggc 42661
>ref|NM_185777.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1428 Score = 46.1 bits (23), Expect = 0.13 Identities = 80/99 (80%) Strand = Plus / Plus Query: 210 cgccgcactacaccaacgaaacgtgctcctacatccaggagcaccagaactgcatgaagt 269 ||||| |||||||||||| |||||| | ||||||| | ||||||||||||||||| Sbjct: 356 cgccgtactacaccaacgcgacgtgcgggttcatccagaactaccagaactgcatgaagc 415 Query: 270 acggccggccggacttggagttcctgaggtggcggtggc 308 |||| |||| | |||||||| || |||||||||||| Sbjct: 416 acgggaggcccagcatggagttcttgcggtggcggtggc 454
>dbj|AP005382.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OJ1001_B06 Length = 134810 Score = 46.1 bits (23), Expect = 0.13 Identities = 50/59 (84%) Strand = Plus / Plus Query: 216 actacaccaacgaaacgtgctcctacatccaggagcaccagaactgcatgaagtacggc 274 ||||||||||||| || ||||| | |||||| |||||| | |||| |||||||||||| Sbjct: 106878 actacaccaacgacacctgctcgttcatccacgagcactatgactgtatgaagtacggc 106936
>dbj|AP003575.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0528B02 Length = 144495 Score = 46.1 bits (23), Expect = 0.13 Identities = 50/59 (84%) Strand = Plus / Plus Query: 216 actacaccaacgaaacgtgctcctacatccaggagcaccagaactgcatgaagtacggc 274 ||||||||||||| || ||||| | |||||| |||||| | |||| |||||||||||| Sbjct: 2186 actacaccaacgacacctgctcgttcatccacgagcactatgactgtatgaagtacggc 2244
>dbj|AK106489.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-105-A03, full insert sequence Length = 1562 Score = 46.1 bits (23), Expect = 0.13 Identities = 80/99 (80%) Strand = Plus / Plus Query: 210 cgccgcactacaccaacgaaacgtgctcctacatccaggagcaccagaactgcatgaagt 269 ||||| |||||||||||| |||||| | ||||||| | ||||||||||||||||| Sbjct: 337 cgccgtactacaccaacgcgacgtgcgggttcatccagaactaccagaactgcatgaagc 396 Query: 270 acggccggccggacttggagttcctgaggtggcggtggc 308 |||| |||| | |||||||| || |||||||||||| Sbjct: 397 acgggaggcccagcatggagttcttgcggtggcggtggc 435
>dbj|AK105495.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-127-C06, full insert sequence Length = 1564 Score = 46.1 bits (23), Expect = 0.13 Identities = 50/59 (84%) Strand = Plus / Plus Query: 216 actacaccaacgaaacgtgctcctacatccaggagcaccagaactgcatgaagtacggc 274 ||||||||||||| || ||||| | |||||| |||||| | |||| |||||||||||| Sbjct: 285 actacaccaacgacacctgctcgttcatccacgagcactatgactgtatgaagtacggc 343
>ref|NM_030678.2| Mus musculus glycogen synthase 1, muscle (Gys1), mRNA Length = 2992 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 234 gctcctacatccaggagcacca 255 |||||||||||||||||||||| Sbjct: 369 gctcctacatccaggagcacca 348
>gb|BC019389.1| Mus musculus glycogen synthase 1, muscle, mRNA (cDNA clone MGC:25254 IMAGE:3663506), complete cds Length = 2992 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 234 gctcctacatccaggagcacca 255 |||||||||||||||||||||| Sbjct: 369 gctcctacatccaggagcacca 348
>dbj|AK148019.1| Mus musculus melanocyte cDNA, RIKEN full-length enriched library, clone:G270140L05 product:Warning: possibly chimeric clone, full insert sequence Length = 3914 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 234 gctcctacatccaggagcacca 255 |||||||||||||||||||||| Sbjct: 561 gctcctacatccaggagcacca 540
>dbj|AK171148.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630227O16 product:glycogen synthase 3, brain, full insert sequence Length = 3666 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 234 gctcctacatccaggagcacca 255 |||||||||||||||||||||| Sbjct: 531 gctcctacatccaggagcacca 510
>dbj|AK169344.1| Mus musculus 17 days embryo heart cDNA, RIKEN full-length enriched library, clone:I920188J12 product:glycogen synthase 3, brain, full insert sequence Length = 3654 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 234 gctcctacatccaggagcacca 255 |||||||||||||||||||||| Sbjct: 572 gctcctacatccaggagcacca 551
>dbj|AK170585.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630109I03 product:glycogen synthase 3, brain, full insert sequence Length = 3611 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 234 gctcctacatccaggagcacca 255 |||||||||||||||||||||| Sbjct: 495 gctcctacatccaggagcacca 474
>dbj|AK170404.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630102K03 product:glycogen synthase 3, brain, full insert sequence Length = 3684 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 234 gctcctacatccaggagcacca 255 |||||||||||||||||||||| Sbjct: 574 gctcctacatccaggagcacca 553
>dbj|AK171426.1| Mus musculus B6-derived CD11 +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F730214L04 product:glycogen synthase 3, brain, full insert sequence Length = 3662 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 234 gctcctacatccaggagcacca 255 |||||||||||||||||||||| Sbjct: 555 gctcctacatccaggagcacca 534
>dbj|AK201650.1| Mus musculus cDNA, clone:Y1G0138O17, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000003964, based on BLAT search Length = 184 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 234 gctcctacatccaggagcacca 255 |||||||||||||||||||||| Sbjct: 109 gctcctacatccaggagcacca 88
>dbj|AK189028.1| Mus musculus cDNA, clone:Y0G0147H16, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000003964, based on BLAT search Length = 328 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 234 gctcctacatccaggagcacca 255 |||||||||||||||||||||| Sbjct: 109 gctcctacatccaggagcacca 88
>gb|AY280868.2| Brassica napus putative beta-glucan elicitor receptor (Bger1), constans-like protein (CoL), and constans (Coa1) genes, complete cds Length = 18604 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 248 gagcaccagaactgcatgaagtacgg 273 |||||||||||||||||| ||||||| Sbjct: 3371 gagcaccagaactgcatgcagtacgg 3396
>gb|AC151602.4| Mus musculus BAC clone RP23-218K15 from chromosome 7, complete sequence Length = 249504 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 234 gctcctacatccaggagcacca 255 |||||||||||||||||||||| Sbjct: 152301 gctcctacatccaggagcacca 152322
>emb|X94616.1|MMGLYCSYN M.musculus mRNA for glycogen synthase Length = 3534 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 234 gctcctacatccaggagcacca 255 |||||||||||||||||||||| Sbjct: 423 gctcctacatccaggagcacca 402
>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome Length = 3997420 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 308 cagccgagccggtgcgacctc 328 ||||||||||||||||||||| Sbjct: 2580544 cagccgagccggtgcgacctc 2580564
>emb|BX248359.1| Corynebacterium diphtheriae gravis NCTC13129, complete genome; segment 6/8 Length = 349895 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 434 ttgtccaaggtggcgtcgccg 454 ||||||||||||||||||||| Sbjct: 282730 ttgtccaaggtggcgtcgccg 282750
>ref|XM_232901.3| PREDICTED: Rattus norvegicus ubiquitin-associated protein 2 (predicted) (Ubap2_predicted), mRNA Length = 4470 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 116 agctactccggcctcccctactaca 140 |||||| |||||||||||||||||| Sbjct: 3008 agctacaccggcctcccctactaca 3032
>dbj|AP005170.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0080E19 Length = 152755 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Minus Query: 299 tggcggtggcagccgagccggtgcgacctcccg 331 |||||||||| |||| | ||||||||||||||| Sbjct: 76441 tggcggtggcggccgcggcggtgcgacctcccg 76409
>dbj|AP004785.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBb0061B07 Length = 124766 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Minus Query: 299 tggcggtggcagccgagccggtgcgacctcccg 331 |||||||||| |||| | ||||||||||||||| Sbjct: 115081 tggcggtggcggccgcggcggtgcgacctcccg 115049
>ref|NM_121594.1| Arabidopsis thaliana unknown protein AT5G15890 mRNA, complete cds Length = 1581 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 248 gagcaccagaactgcatgaa 267 |||||||||||||||||||| Sbjct: 637 gagcaccagaactgcatgaa 656
>gb|AE017349.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 9, complete sequence Length = 1178688 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 456 aggaggtgacagagaggacg 475 |||||||||||||||||||| Sbjct: 733181 aggaggtgacagagaggacg 733200
>gb|CP000144.1| Rhodobacter sphaeroides 2.4.1 chromosome 2, complete genome Length = 943016 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 31 gctcatcaagcttctcttcg 50 |||||||||||||||||||| Sbjct: 192432 gctcatcaagcttctcttcg 192451
>ref|XM_364891.1| Magnaporthe grisea 70-15 hypothetical protein (MG09736.4) partial mRNA Length = 633 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 295 gaggtggcggtggcagccgagccggtgc 322 ||||||||| |||| ||||||||||||| Sbjct: 551 gaggtggcgctggcggccgagccggtgc 524
>gb|DQ415920.1| Cleome spinosa clone BAC Cs3, complete sequence Length = 141360 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 242 atccaggagcaccagaactgcatgaagt 269 ||||| |||||||| ||||||||||||| Sbjct: 94557 atccacgagcaccaaaactgcatgaagt 94530
>gb|AC139512.20| Mus musculus chromosome 6, clone RP24-540G13, complete sequence Length = 179236 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 186 agtgggtcccggaagctgac 205 |||||||||||||||||||| Sbjct: 134077 agtgggtcccggaagctgac 134096
>gb|AY428910.1| Carica papaya isolate cpsm75 sex hermaphrodite chromosome Y male specific sequence Length = 379 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 506 tacaacttcaccataaaaat 525 |||||||||||||||||||| Sbjct: 292 tacaacttcaccataaaaat 273
>emb|Z81114.1|CET04D3 Caenorhabditis elegans Cosmid T04D3, complete sequence Length = 35220 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 508 caacttcaccataaaaatca 527 |||||||||||||||||||| Sbjct: 9811 caacttcaccataaaaatca 9830
>ref|XM_572680.1| Cryptococcus neoformans var. neoformans JEC21 nuclear mRNA splicing, via spliceosome-related protein (CNI02720) partial mRNA Length = 1055 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 456 aggaggtgacagagaggacg 475 |||||||||||||||||||| Sbjct: 135 aggaggtgacagagaggacg 154
>gb|AC146792.27| Medicago truncatula clone mth2-32m20, complete sequence Length = 125714 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 511 cttcaccataaaaatcatct 530 |||||||||||||||||||| Sbjct: 83689 cttcaccataaaaatcatct 83708
>gb|AC147202.14| Medicago truncatula clone mth2-165g15, complete sequence Length = 116731 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 509 aacttcaccataaaaatcat 528 |||||||||||||||||||| Sbjct: 109572 aacttcaccataaaaatcat 109591
>gb|AC105167.8| Mus musculus, clone RP23-286L9, complete sequence Length = 215113 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 535 gcctttcctggtgaggacggagga 558 ||||||| |||||||||||||||| Sbjct: 12339 gcctttcatggtgaggacggagga 12316
>emb|AL669988.1|NCB23H20 Neurospora crassa DNA linkage group II BAC contig B23H20 Length = 122151 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 347 aagttcttccgtctcgtcgggaac 370 |||||||||||||||||| ||||| Sbjct: 26415 aagttcttccgtctcgtctggaac 26438
>emb|AL391145.1|ATF1N13 Arabidopsis thaliana DNA chromosome 5, BAC clone F1N13 (ESSA project) Length = 74687 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 gagcaccagaactgcatgaa 267 |||||||||||||||||||| Sbjct: 7422 gagcaccagaactgcatgaa 7403
>ref|NM_142642.1| Drosophila melanogaster CG4159-RA (CG4159), mRNA Length = 1233 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 492 tgcactacgagcgctacaac 511 |||||||||||||||||||| Sbjct: 968 tgcactacgagcgctacaac 987
>gb|CP000123.1| Mycoplasma capricolum subsp. capricolum ATCC 27343, complete genome Length = 1010023 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 508 caacttcaccataaaaatca 527 |||||||||||||||||||| Sbjct: 492481 caacttcaccataaaaatca 492462
>gb|AC007771.7|AC007771 Drosophila melanogaster, chromosome 3R, region 92E-92F, BAC clone BACR26M03, complete sequence Length = 197071 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 492 tgcactacgagcgctacaac 511 |||||||||||||||||||| Sbjct: 1371 tgcactacgagcgctacaac 1352
>gb|AC007757.5|AC007757 Drosophila melanogaster, chromosome 3R, region 92E-92F, BAC clone BACR13J19, complete sequence Length = 170939 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 492 tgcactacgagcgctacaac 511 |||||||||||||||||||| Sbjct: 113343 tgcactacgagcgctacaac 113324
>gb|AC106876.3| Homo sapiens BAC clone RP11-512N9 from 2, complete sequence Length = 116305 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 239 tacatccaggagcaccagaactgc 262 ||||||| |||||||||||||||| Sbjct: 15325 tacatcctggagcaccagaactgc 15302
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 gttcctctcggcgctcatca 83 |||||||||||||||||||| Sbjct: 2645110 gttcctctcggcgctcatca 2645091
>gb|AC153976.3| Mus musculus 10 BAC RP24-309I5 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 146772 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 535 gcctttcctggtgaggacggagga 558 ||||||| |||||||||||||||| Sbjct: 134593 gcctttcatggtgaggacggagga 134570
>gb|AE003731.3| Drosophila melanogaster chromosome 3R, section 69 of 118 of the complete sequence Length = 230001 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 492 tgcactacgagcgctacaac 511 |||||||||||||||||||| Sbjct: 67586 tgcactacgagcgctacaac 67567 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,628,238 Number of Sequences: 3902068 Number of extensions: 3628238 Number of successful extensions: 65326 Number of sequences better than 10.0: 65 Number of HSP's better than 10.0 without gapping: 63 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 64878 Number of HSP's gapped (non-prelim): 430 length of query: 598 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 575 effective length of database: 17,143,297,704 effective search space: 9857396179800 effective search space used: 9857396179800 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
