ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart48d04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AL606649.4|OSJN00094 Oryza sativa genomic DNA, chromosome 4,... 90 1e-14
2dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 90 1e-14
3dbj|AK121265.1| Oryza sativa (japonica cultivar-group) cDNA clon... 90 1e-14
4gb|AY106843.1| Zea mays PCO102445 mRNA sequence 58 3e-05
5gb|AY107986.1| Zea mays PCO107237 mRNA sequence 56 1e-04
6dbj|AK063036.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.002
7gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence 44 0.52
8emb|AJ564474.1|HMO564474 Halococcus morrhuae partial gggp syntha... 44 0.52
9ref|XM_623819.1| PREDICTED: Apis mellifera similar to Spfh1 prot... 44 0.52
10gb|AC084459.1|AC084459 Caenorhabditis briggsae cosmid CB032J19, ... 44 0.52
11gb|U04727.1|PPU04727 Porphyra purpurea Avonport clone 23b6 sporo... 44 0.52
12gb|DP000014.1| Callithrix jacchus target 1 genomic scaffold 42 2.1
13emb|AL513264.8| Human DNA sequence from clone RP11-480H3 on chro... 42 2.1
14emb|AL136981.22| Human DNA sequence from clone RP11-526D8 on chr... 42 2.1
15gb|AC152162.9| Mus musculus chromosome 19, clone RP23-457B18, co... 42 2.1
16gb|AC146674.3| Callithrix jacchus clone CH259-338M13, complete s... 42 2.1
17emb|AL939106.1|SCO939106 Streptomyces coelicolor A3(2) complete ... 42 2.1
18gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome 42 2.1
19gb|AE005106.1| Halobacterium sp. NRC-1 section 137 of 170 of the... 42 2.1
20gb|AC102755.18| Mus musculus chromosome 19, clone RP24-143E6, co... 42 2.1
21emb|BX000481.5| Zebrafish DNA sequence from clone CH211-13A4 in ... 42 2.1
22emb|AL954699.4| Zebrafish DNA sequence from clone CH211-264H3 in... 42 2.1
23emb|AL845524.5| Mouse DNA sequence from clone RP23-248D22 on chr... 42 2.1
24gb|AC111134.10| Mus musculus chromosome 3, clone RP23-349J3, com... 40 8.1
25ref|XM_636824.1| Dictyostelium discoideum hypothetical protein (... 40 8.1
26gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome 40 8.1
27ref|XM_956745.1| Neurospora crassa OR74A hypothetical protein (N... 40 8.1
28ref|XM_327302.1| Neurospora crassa OR74A hypothetical protein (N... 40 8.1
29gb|AF117829.3| Homo sapiens chromosome 8 multiple clones map q21... 40 8.1
30emb|CR931997.1| Corynebacterium jeikeium K411 complete genome 40 8.1
31gb|AC135036.2| Homo sapiens 3 BAC RP11-178L24 (Roswell Park Canc... 40 8.1
32gb|AC116575.4| Mus musculus BAC clone RP23-263I24 from 9, comple... 40 8.1
33gb|AC102044.7| Mus musculus chromosome 9, clone RP23-303N8, comp... 40 8.1
34gb|AC073980.5| Homo sapiens BAC clone RP11-312H11 from 7, comple... 40 8.1
35gb|AC141111.25| Medicago truncatula clone mth2-20c17, complete s... 40 8.1
36gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome 40 8.1
37emb|BX842574.1| Mycobacterium tuberculosis H37Rv complete genome... 40 8.1
38emb|BX248336.1| Mycobacterium bovis subsp. bovis AF2122/97 compl... 40 8.1
39gb|AC114930.2| Homo sapiens chromosome 5 clone CTD-2017A19, comp... 40 8.1
40dbj|AK092564.1| Homo sapiens cDNA FLJ35245 fis, clone PROST20028... 40 8.1
41gb|AC107223.5| Homo sapiens BAC clone RP11-1289C17 from 4, compl... 40 8.1
42gb|AC010342.5|AC010342 Homo sapiens chromosome 5 clone CTD-2015B... 40 8.1
43gb|AC108125.4| Homo sapiens chromosome 16 clone RP11-58C22, comp... 40 8.1
44gb|AC074178.1|AC074178 Homo sapiens PAC clone RP5-1098O20 from 8... 40 8.1
45gb|AF069291.1|AF069291 Homo sapiens BAC clone 255A7 from 8q21 co... 40 8.1
46gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 40 8.1
47emb|CT030167.8| Mouse DNA sequence from clone RP23-333E24 on chr... 40 8.1
48dbj|AB018699.1| Broad bean wilt virus 2 gene for polyprotein con... 40 8.1 
>emb|AL606649.4|OSJN00094 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0003B01,
             complete sequence
          Length = 153643

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 66/73 (90%)
 Strand = Plus / Plus

                                                                         
Query: 121   catggccaacttcgccacccagctcaaggataggtttttcggcctcgtcgaccgcgtcgc 180
             ||||||||| |||||  | ||||||||||| |||||| ||||||||||||| ||||||||
Sbjct: 29254 catggccaagttcgctgctcagctcaaggacaggtttctcggcctcgtcgagcgcgtcgc 29313

                          
Query: 181   cggctgcggccgc 193
             |||||||||||||
Sbjct: 29314 cggctgcggccgc 29326



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 41/46 (89%)
 Strand = Plus / Plus

                                                           
Query: 140   cagctcaaggataggtttttcggcctcgtcgaccgcgtcgccggct 185
             ||||||||||| | ||| |||||||||||||| |||||| ||||||
Sbjct: 31493 cagctcaaggacatgttcttcggcctcgtcgagcgcgtcaccggct 31538
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 66/73 (90%)
 Strand = Plus / Plus

                                                                            
Query: 121      catggccaacttcgccacccagctcaaggataggtttttcggcctcgtcgaccgcgtcgc 180
                ||||||||| |||||  | ||||||||||| |||||| ||||||||||||| ||||||||
Sbjct: 32510520 catggccaagttcgctgctcagctcaaggacaggtttctcggcctcgtcgagcgcgtcgc 32510579

                             
Query: 181      cggctgcggccgc 193
                |||||||||||||
Sbjct: 32510580 cggctgcggccgc 32510592



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 41/46 (89%)
 Strand = Plus / Plus

                                                              
Query: 140      cagctcaaggataggtttttcggcctcgtcgaccgcgtcgccggct 185
                ||||||||||| | ||| |||||||||||||| |||||| ||||||
Sbjct: 32512759 cagctcaaggacatgttcttcggcctcgtcgagcgcgtcaccggct 32512804
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>dbj|AK121265.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023105D11, full
           insert sequence
          Length = 596

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 66/73 (90%)
 Strand = Plus / Plus

                                                                       
Query: 121 catggccaacttcgccacccagctcaaggataggtttttcggcctcgtcgaccgcgtcgc 180
           ||||||||| |||||  | ||||||||||| |||||| ||||||||||||| ||||||||
Sbjct: 119 catggccaagttcgctgctcagctcaaggacaggtttctcggcctcgtcgagcgcgtcgc 178

                        
Query: 181 cggctgcggccgc 193
           |||||||||||||
Sbjct: 179 cggctgcggccgc 191
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>gb|AY106843.1| Zea mays PCO102445 mRNA sequence
          Length = 808

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 65/77 (84%)
 Strand = Plus / Plus

                                                                       
Query: 122 atggccaacttcgccacccagctcaaggataggtttttcggcctcgtcgaccgcgtcgcc 181
           ||||||||||||||  | ||| | ||||| | |||  |||||||||||||||| ||||||
Sbjct: 354 atggccaacttcgctgctcagattaaggacaagttcctcggcctcgtcgaccgtgtcgcc 413

                            
Query: 182 ggctgcggccgcaccgg 198
           ||| |||||||| ||||
Sbjct: 414 ggccgcggccgcgccgg 430
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>gb|AY107986.1| Zea mays PCO107237 mRNA sequence
          Length = 493

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Plus

                                                           
Query: 140 cagctcaaggataggtttttcggcctcgtcgaccgcgtcgccggctgc 187
           ||||||||||| | |||  |||||||||||||||||||| ||||||||
Sbjct: 128 cagctcaaggacatgttcctcggcctcgtcgaccgcgtcaccggctgc 175
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>dbj|AK063036.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-110-C11, full
           insert sequence
          Length = 832

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 41/46 (89%)
 Strand = Plus / Plus

                                                         
Query: 140 cagctcaaggataggtttttcggcctcgtcgaccgcgtcgccggct 185
           ||||||||||| | ||| |||||||||||||| |||||| ||||||
Sbjct: 168 cagctcaaggacatgttcttcggcctcgtcgagcgcgtcaccggct 213
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>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence
          Length = 3694126

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 159     tcggcctcgtcgaccgcgtcgc 180
               ||||||||||||||||||||||
Sbjct: 3379443 tcggcctcgtcgaccgcgtcgc 3379422
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>emb|AJ564474.1|HMO564474 Halococcus morrhuae partial gggp synthase gene for putative
           geranylgeranylglyceryl phosphate synthase
          Length = 447

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 162 gcctcgtcgaccgcgtcgccggctgcggcc 191
           |||||||||| |||||||||||| ||||||
Sbjct: 434 gcctcgtcgagcgcgtcgccggcggcggcc 405
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>ref|XM_623819.1| PREDICTED: Apis mellifera similar to Spfh1 protein (LOC551427), mRNA
          Length = 1281

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 577  agtaaaattgatccaattttaa 598
            ||||||||||||||||||||||
Sbjct: 1228 agtaaaattgatccaattttaa 1249
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>gb|AC084459.1|AC084459 Caenorhabditis briggsae cosmid CB032J19, complete sequence
          Length = 92783

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                           
Query: 387   gttctcccttgttctgaaaattgaaacaaa 416
             |||||||||| || ||||||||||||||||
Sbjct: 44395 gttctccctttttttgaaaattgaaacaaa 44366
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>gb|U04727.1|PPU04727 Porphyra purpurea Avonport clone 23b6 sporophyte-specific mRNA,
           partial sequence
          Length = 1008

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 161 ggcctcgtcgaccgcgtcgccg 182
           ||||||||||||||||||||||
Sbjct: 489 ggcctcgtcgaccgcgtcgccg 510
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>gb|DP000014.1| Callithrix jacchus target 1 genomic scaffold
          Length = 1952403

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 567     ttgatgaaggagtaaaattgatcca 591
               ||||||||||||||||| |||||||
Sbjct: 1879628 ttgatgaaggagtaaaaatgatcca 1879652
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>emb|AL513264.8| Human DNA sequence from clone RP11-480H3 on chromosome 6, complete
             sequence
          Length = 90015

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 512   atgccttgtaactgaagaattgagt 536
             ||||||| |||||||||||||||||
Sbjct: 62765 atgccttttaactgaagaattgagt 62789
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>emb|AL136981.22| Human DNA sequence from clone RP11-526D8 on chromosome 9 Contains the
             5' end of the gene for coiled-coil protein (BICD2)
             (KIAA0699), a novel gene, a eukaryotic translation
             elongation factor 1 delta (guanine nucleotide exchange
             protein) (EEF1D) pseudogene, the gene for a novel KRAB
             box-containing C2H2 type zinc finger protein, a novel
             gene, a pseudogene similar to part of sorting nexin
             associated golgi protein 1 (SNAG1), a novel pseudogene, a
             melanoma antigen pseudogene and three CpG islands,
             complete sequence
          Length = 182280

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 71    accagtgtgcactgcactcct 91
             |||||||||||||||||||||
Sbjct: 35982 accagtgtgcactgcactcct 35962
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>gb|AC152162.9| Mus musculus chromosome 19, clone RP23-457B18, complete sequence
          Length = 182365

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 138   cccagctcaaggataggtttt 158
             |||||||||||||||||||||
Sbjct: 89281 cccagctcaaggataggtttt 89301
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>gb|AC146674.3| Callithrix jacchus clone CH259-338M13, complete sequence
          Length = 228448

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 567    ttgatgaaggagtaaaattgatcca 591
              ||||||||||||||||| |||||||
Sbjct: 155673 ttgatgaaggagtaaaaatgatcca 155697
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>emb|AL939106.1|SCO939106 Streptomyces coelicolor A3(2) complete genome; segment 3/29
          Length = 314100

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 158    ttcggcctcgtcgaccgcgtcgccg 182
              |||| ||||||||||||||||||||
Sbjct: 263986 ttcgtcctcgtcgaccgcgtcgccg 263962
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>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome
          Length = 7074893

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 179     gccggctgcggccgcaccggg 199
               |||||||||||||||||||||
Sbjct: 5748940 gccggctgcggccgcaccggg 5748920



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 130     cttcgccacccagctcaagga 150
               |||||||||||||||||||||
Sbjct: 4592836 cttcgccacccagctcaagga 4592856
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>gb|AE005106.1| Halobacterium sp. NRC-1 section 137 of 170 of the complete genome
          Length = 13219

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 162   gcctcgtcgaccgcgtcgccg 182
             |||||||||||||||||||||
Sbjct: 11815 gcctcgtcgaccgcgtcgccg 11835
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>gb|AC102755.18| Mus musculus chromosome 19, clone RP24-143E6, complete sequence
          Length = 153856

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 138    cccagctcaaggataggtttt 158
              |||||||||||||||||||||
Sbjct: 143180 cccagctcaaggataggtttt 143200
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>emb|BX000481.5| Zebrafish DNA sequence from clone CH211-13A4 in linkage group 5,
             complete sequence
          Length = 163926

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 394   cttgttctgaaaattgaaaca 414
             |||||||||||||||||||||
Sbjct: 82592 cttgttctgaaaattgaaaca 82572
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>emb|AL954699.4| Zebrafish DNA sequence from clone CH211-264H3 in linkage group 5,
             complete sequence
          Length = 143013

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 394   cttgttctgaaaattgaaaca 414
             |||||||||||||||||||||
Sbjct: 84060 cttgttctgaaaattgaaaca 84040
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>emb|AL845524.5| Mouse DNA sequence from clone RP23-248D22 on chromosome 2, complete
              sequence
          Length = 174188

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 377    agattcatgtgttctcccttg 397
              |||||||||||||||||||||
Sbjct: 142214 agattcatgtgttctcccttg 142234
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>gb|AC111134.10| Mus musculus chromosome 3, clone RP23-349J3, complete sequence
          Length = 223171

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 449    agtgtgcttgtgcgtgcgtg 468
              ||||||||||||||||||||
Sbjct: 142953 agtgtgcttgtgcgtgcgtg 142934
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>ref|XM_636824.1| Dictyostelium discoideum hypothetical protein (DDB0215303), partial
           mRNA
          Length = 2997

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 529 aattgagtttcatgatgatt 548
           ||||||||||||||||||||
Sbjct: 917 aattgagtttcatgatgatt 898
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>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome
          Length = 4403837

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 160    cggcctcgtcgaccgcgtcg 179
              ||||||||||||||||||||
Sbjct: 768142 cggcctcgtcgaccgcgtcg 768123
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>ref|XM_956745.1| Neurospora crassa OR74A hypothetical protein (NCU07017.1) partial
           mRNA
          Length = 1038

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 221 gcgccggcgccggcagtgca 240
           ||||||||||||||||||||
Sbjct: 695 gcgccggcgccggcagtgca 676
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>ref|XM_327302.1| Neurospora crassa OR74A hypothetical protein (NCU07017.1) partial
           mRNA
          Length = 1038

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 221 gcgccggcgccggcagtgca 240
           ||||||||||||||||||||
Sbjct: 695 gcgccggcgccggcagtgca 676
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>gb|AF117829.3| Homo sapiens chromosome 8 multiple clones map q21.3, complete sequence
          Length = 320187

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 395    ttgttctgaaaattgaaaca 414
              ||||||||||||||||||||
Sbjct: 266622 ttgttctgaaaattgaaaca 266603
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>emb|CR931997.1| Corynebacterium jeikeium K411 complete genome
          Length = 2462499

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 160    cggcctcgtcgaccgcgtcg 179
              ||||||||||||||||||||
Sbjct: 625165 cggcctcgtcgaccgcgtcg 625146
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>gb|AC135036.2| Homo sapiens 3 BAC RP11-178L24 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 73388

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 57    ttccagaccagaaaaccagt 76
             ||||||||||||||||||||
Sbjct: 57054 ttccagaccagaaaaccagt 57035
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>gb|AC116575.4| Mus musculus BAC clone RP23-263I24 from 9, complete sequence
          Length = 208678

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 388  ttctcccttgttctgaaaattgaa 411
            |||||||||| |||||||||||||
Sbjct: 3101 ttctcccttgctctgaaaattgaa 3078
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>gb|AC102044.7| Mus musculus chromosome 9, clone RP23-303N8, complete sequence
          Length = 210347

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 388   ttctcccttgttctgaaaattgaa 411
             |||||||||| |||||||||||||
Sbjct: 51404 ttctcccttgctctgaaaattgaa 51427
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>gb|AC073980.5| Homo sapiens BAC clone RP11-312H11 from 7, complete sequence
          Length = 101539

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 566   tttgatgaaggagtaaaatt 585
             ||||||||||||||||||||
Sbjct: 86285 tttgatgaaggagtaaaatt 86266
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>gb|AC141111.25| Medicago truncatula clone mth2-20c17, complete sequence
          Length = 113836

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 427   gttggtgattttgaatgtgt 446
             ||||||||||||||||||||
Sbjct: 13097 gttggtgattttgaatgtgt 13078
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>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 217     gtcggcgccggcgccggcag 236
               ||||||||||||||||||||
Sbjct: 4681617 gtcggcgccggcgccggcag 4681598
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>emb|BX842574.1| Mycobacterium tuberculosis H37Rv complete genome; segment 3/13
          Length = 349564

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 160   cggcctcgtcgaccgcgtcg 179
             ||||||||||||||||||||
Sbjct: 81896 cggcctcgtcgaccgcgtcg 81877
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>emb|BX248336.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 3/14
          Length = 320050

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 160    cggcctcgtcgaccgcgtcg 179
              ||||||||||||||||||||
Sbjct: 100938 cggcctcgtcgaccgcgtcg 100919
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>gb|AC114930.2| Homo sapiens chromosome 5 clone CTD-2017A19, complete sequence
          Length = 100233

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 399   tctgaaaattgaaacaaatg 418
             ||||||||||||||||||||
Sbjct: 84858 tctgaaaattgaaacaaatg 84839
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>dbj|AK092564.1| Homo sapiens cDNA FLJ35245 fis, clone PROST2002897, moderately
           similar to Oryctolagus cuniculus CARP mRNA
          Length = 2455

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 192 gcaccggggtcaaggaggcc 211
           ||||||||||||||||||||
Sbjct: 744 gcaccggggtcaaggaggcc 725
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>gb|AC107223.5| Homo sapiens BAC clone RP11-1289C17 from 4, complete sequence
          Length = 183515

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 507    tggtcatgccttgtaactga 526
              ||||||||||||||||||||
Sbjct: 112035 tggtcatgccttgtaactga 112016
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>gb|AC010342.5|AC010342 Homo sapiens chromosome 5 clone CTD-2015B23, complete sequence
          Length = 126010

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 399   tctgaaaattgaaacaaatg 418
             ||||||||||||||||||||
Sbjct: 28919 tctgaaaattgaaacaaatg 28900
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>gb|AC108125.4| Homo sapiens chromosome 16 clone RP11-58C22, complete sequence
          Length = 153746

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 413   caaatgctttgcttgttggt 432
             ||||||||||||||||||||
Sbjct: 89582 caaatgctttgcttgttggt 89563
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>gb|AC074178.1|AC074178 Homo sapiens PAC clone RP5-1098O20 from 8, complete sequence
          Length = 107549

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 395   ttgttctgaaaattgaaaca 414
             ||||||||||||||||||||
Sbjct: 10601 ttgttctgaaaattgaaaca 10582
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>gb|AF069291.1|AF069291 Homo sapiens BAC clone 255A7 from 8q21 containing NBS1 gene, complete
             sequence
          Length = 184919

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 395   ttgttctgaaaattgaaaca 414
             ||||||||||||||||||||
Sbjct: 36355 ttgttctgaaaattgaaaca 36336
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>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 160     cggcctcgtcgaccgcgtcg 179
               ||||||||||||||||||||
Sbjct: 4609528 cggcctcgtcgaccgcgtcg 4609509
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>emb|CT030167.8| Mouse DNA sequence from clone RP23-333E24 on chromosome 13, complete
             sequence
          Length = 192930

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 579   taaaattgatccaattttaa 598
             ||||||||||||||||||||
Sbjct: 22165 taaaattgatccaattttaa 22184
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>dbj|AB018699.1| Broad bean wilt virus 2 gene for polyprotein containing large and
           small coat proteins, partial cds, isolate: E
          Length = 2406

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 69  aaaccagtgtgcactgcact 88
           ||||||||||||||||||||
Sbjct: 615 aaaccagtgtgcactgcact 596


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,159,680
Number of Sequences: 3902068
Number of extensions: 6159680
Number of successful extensions: 160600
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 159722
Number of HSP's gapped (non-prelim): 877
length of query: 598
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 575
effective length of database: 17,143,297,704
effective search space: 9857396179800
effective search space used: 9857396179800
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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