ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart48d02 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK063497.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-116-D06, full insert sequence Length = 1439 Score = 450 bits (227), Expect = e-123 Identities = 469/550 (85%) Strand = Plus / Plus Query: 82 cgtcgccgtcgtggccttcgcggcggtgctgaagctcgggctcgtcggcgccaacttcgc 141 ||||| |||||| ||| | ||||||||||| |||| ||||||||||| ||||||||| Sbjct: 369 cgtcgtcgtcgtcgccgtggcggcggtgctcgagctggggctcgtcggagccaacttcca 428 Query: 142 ggacctgtgcgacatcacgtgggagccgcagaacgccgcgatgacggacggaggggagca 201 ||| | ||| ||||||||||||||||| ||||||||| ||||||||| ||||| || || Sbjct: 429 ggatcagtgtgacatcacgtgggagccacagaacgccaagatgacggagggaggagacca 488 Query: 202 cctcacgctctccctcgtcagcaacatctcaggcagtatgctccggaccaagaagacgtt 261 ||||||||||||||| ||||||||| ||| || |||||||||||||||||||| ||| Sbjct: 489 cctcacgctctcccttgtcagcaactcctctggttgtatgctccggaccaagaagcagtt 548 Query: 262 catctacggcagcatatccaccttgatcaagctggtcaagggcaactccgccggcaccgt 321 ||||||||||||| | || || ||| |||| || ||||||||||| ||||||||||| Sbjct: 549 catctacggcagcgtgtcgactcgcatccagcttgtgaagggcaactcggccggcaccgt 608 Query: 322 cacaacctactatacgtcgtcggtgggcgacgaccacgacgagatcgacttcgagttcct 381 ||| |||||||| || ||||| | |||||| | |||||||||||||||||||||||||| Sbjct: 609 caccacctactacacatcgtccatcggcgacaaacacgacgagatcgacttcgagttcct 668 Query: 382 gggcaacgagacgggccagccctacaccatccacaccaacgtgttcgcggacggcgtggg 441 ||||||| | |||| ||||||||| ||||||||||||| ||||| |||||||| || Sbjct: 669 gggcaactccagcggcctcccctacaccttccacaccaacgtcttcgccgacggcgtcgg 728 Query: 442 cgccaaggagatgcagttctacccctggttcgaccccaccgccgacttccacaactacac 501 | | |||||||||||| |||||||||||||||||||| || || |||||||||||| Sbjct: 729 cagccgcgagatgcagttccgcccctggttcgaccccaccgacggctaccacaactacac 788 Query: 502 catcttctggaacccctccatgatcgtgtggttcgtggacagcatcccgatccgcgtgtt 561 ||||||||||||||||| |||||||||||||||||||||||||||||| ||| | ||||| Sbjct: 789 catcttctggaacccctgcatgatcgtgtggttcgtggacagcatcccaatcagggtgtt 848 Query: 562 ccgcaactacgcngagcagggcgtgccgttcccgacgaagcggccgatgtacggcttctc 621 ||| ||| ||| || | || |||||||||||||| |||||||||||||||| |||||| Sbjct: 849 ccggaaccacgagaaggaaggggtgccgttcccgacaaagcggccgatgtacgccttctc 908 Query: 622 cagcatctgg 631 |||||||||| Sbjct: 909 cagcatctgg 918
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 206 bits (104), Expect = 6e-50 Identities = 173/196 (88%) Strand = Plus / Plus Query: 335 acgtcgtcggtgggcgacgaccacgacgagatcgacttcgagttcctgggcaacgagacg 394 ||||||||| |||| ||| | |||||||||||||||||||||||||||||||||||||| Sbjct: 10359093 acgtcgtcgctgggtgacaagcacgacgagatcgacttcgagttcctgggcaacgagacc 10359152 Query: 395 ggccagccctacaccatccacaccaacgtgttcgcggacggcgtgggcgccaaggagatg 454 || || ||||||||||||||||||||||| | ||| ||||||| |||| |||||||||| Sbjct: 10359153 ggacaaccctacaccatccacaccaacgtctacgccaacggcgtcggcgacaaggagatg 10359212 Query: 455 cagttctacccctggttcgaccccaccgccgacttccacaactacaccatcttctggaac 514 |||||| | || |||||||||||||||| || || ||||||||||||||||| ||||| | Sbjct: 10359213 cagttcaagccgtggttcgaccccaccgacggctcccacaactacaccatctcctggacc 10359272 Query: 515 ccctccatgatcgtgt 530 |||| || |||||||| Sbjct: 10359273 ccctgcaggatcgtgt 10359288 Score = 133 bits (67), Expect = 8e-28 Identities = 148/175 (84%) Strand = Plus / Plus Query: 338 tcgtcggtgggcgacgaccacgacgagatcgacttcgagttcctgggcaacgagacgggc 397 |||||||| || ||| ||||||||||||||||||| |||||| | ||||||||||| ||| Sbjct: 10363950 tcgtcggtcggagacaaccacgacgagatcgactttgagttcttaggcaacgagaccggc 10364009 Query: 398 cagccctacaccatccacaccaacgtgttcgcggacggcgtgggcgccaaggagatgcag 457 || ||||||||||||||||||||| | | || | ||||| |||| ||||||||||||| Sbjct: 10364010 caaccctacaccatccacaccaacatctatgccaatggcgtcggcgacaaggagatgcag 10364069 Query: 458 ttctacccctggttcgaccccaccgccgacttccacaactacaccatcttctgga 512 ||| | || |||||| ||||||||| | || ||||||||||||| ||| ||||| Sbjct: 10364070 ttcaagccgtggttcaaccccaccgatggctaccacaactacaccgtctcctgga 10364124 Score = 73.8 bits (37), Expect = 6e-10 Identities = 52/57 (91%) Strand = Plus / Minus Query: 456 agttctacccctggttcgaccccaccgccgacttccacaactacaccatcttctgga 512 ||||| ||| |||||||||||||||||||||||||||| ||||| ||||| |||||| Sbjct: 35396754 agttccacctctggttcgaccccaccgccgacttccaccactacgccatcctctgga 35396698 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 356 cacgacgagatcgacttcgagttcctgggcaac 388 ||||||||| | ||||||||||||||||||||| Sbjct: 1445479 cacgacgagctggacttcgagttcctgggcaac 1445511 Score = 48.1 bits (24), Expect = 0.036 Identities = 27/28 (96%) Strand = Plus / Plus Query: 302 ggcaactccgccggcaccgtcacaacct 329 ||||||||||||||||||||||| |||| Sbjct: 10358916 ggcaactccgccggcaccgtcaccacct 10358943 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Plus Query: 356 cacgacgagatcgacttcgagttcctgggca 386 ||||||||| | ||||||||||||||||||| Sbjct: 28642117 cacgacgagctggacttcgagttcctgggca 28642147 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 202 cctcacgctctccctcgtcagcaac 226 |||| |||||||||||||||||||| Sbjct: 10363214 cctctcgctctccctcgtcagcaac 10363238
>dbj|AP005398.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0669G10 Length = 133372 Score = 206 bits (104), Expect = 6e-50 Identities = 173/196 (88%) Strand = Plus / Plus Query: 335 acgtcgtcggtgggcgacgaccacgacgagatcgacttcgagttcctgggcaacgagacg 394 ||||||||| |||| ||| | |||||||||||||||||||||||||||||||||||||| Sbjct: 1515 acgtcgtcgctgggtgacaagcacgacgagatcgacttcgagttcctgggcaacgagacc 1574 Query: 395 ggccagccctacaccatccacaccaacgtgttcgcggacggcgtgggcgccaaggagatg 454 || || ||||||||||||||||||||||| | ||| ||||||| |||| |||||||||| Sbjct: 1575 ggacaaccctacaccatccacaccaacgtctacgccaacggcgtcggcgacaaggagatg 1634 Query: 455 cagttctacccctggttcgaccccaccgccgacttccacaactacaccatcttctggaac 514 |||||| | || |||||||||||||||| || || ||||||||||||||||| ||||| | Sbjct: 1635 cagttcaagccgtggttcgaccccaccgacggctcccacaactacaccatctcctggacc 1694 Query: 515 ccctccatgatcgtgt 530 |||| || |||||||| Sbjct: 1695 ccctgcaggatcgtgt 1710 Score = 133 bits (67), Expect = 8e-28 Identities = 148/175 (84%) Strand = Plus / Plus Query: 338 tcgtcggtgggcgacgaccacgacgagatcgacttcgagttcctgggcaacgagacgggc 397 |||||||| || ||| ||||||||||||||||||| |||||| | ||||||||||| ||| Sbjct: 6372 tcgtcggtcggagacaaccacgacgagatcgactttgagttcttaggcaacgagaccggc 6431 Query: 398 cagccctacaccatccacaccaacgtgttcgcggacggcgtgggcgccaaggagatgcag 457 || ||||||||||||||||||||| | | || | ||||| |||| ||||||||||||| Sbjct: 6432 caaccctacaccatccacaccaacatctatgccaatggcgtcggcgacaaggagatgcag 6491 Query: 458 ttctacccctggttcgaccccaccgccgacttccacaactacaccatcttctgga 512 ||| | || |||||| ||||||||| | || ||||||||||||| ||| ||||| Sbjct: 6492 ttcaagccgtggttcaaccccaccgatggctaccacaactacaccgtctcctgga 6546 Score = 48.1 bits (24), Expect = 0.036 Identities = 27/28 (96%) Strand = Plus / Plus Query: 302 ggcaactccgccggcaccgtcacaacct 329 ||||||||||||||||||||||| |||| Sbjct: 1338 ggcaactccgccggcaccgtcaccacct 1365 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 202 cctcacgctctccctcgtcagcaac 226 |||| |||||||||||||||||||| Sbjct: 5636 cctctcgctctccctcgtcagcaac 5660
>dbj|AP004872.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0444A09 Length = 125900 Score = 206 bits (104), Expect = 6e-50 Identities = 173/196 (88%) Strand = Plus / Plus Query: 335 acgtcgtcggtgggcgacgaccacgacgagatcgacttcgagttcctgggcaacgagacg 394 ||||||||| |||| ||| | |||||||||||||||||||||||||||||||||||||| Sbjct: 124903 acgtcgtcgctgggtgacaagcacgacgagatcgacttcgagttcctgggcaacgagacc 124962 Query: 395 ggccagccctacaccatccacaccaacgtgttcgcggacggcgtgggcgccaaggagatg 454 || || ||||||||||||||||||||||| | ||| ||||||| |||| |||||||||| Sbjct: 124963 ggacaaccctacaccatccacaccaacgtctacgccaacggcgtcggcgacaaggagatg 125022 Query: 455 cagttctacccctggttcgaccccaccgccgacttccacaactacaccatcttctggaac 514 |||||| | || |||||||||||||||| || || ||||||||||||||||| ||||| | Sbjct: 125023 cagttcaagccgtggttcgaccccaccgacggctcccacaactacaccatctcctggacc 125082 Query: 515 ccctccatgatcgtgt 530 |||| || |||||||| Sbjct: 125083 ccctgcaggatcgtgt 125098 Score = 48.1 bits (24), Expect = 0.036 Identities = 27/28 (96%) Strand = Plus / Plus Query: 302 ggcaactccgccggcaccgtcacaacct 329 ||||||||||||||||||||||| |||| Sbjct: 124726 ggcaactccgccggcaccgtcaccacct 124753
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 174 bits (88), Expect = 2e-40 Identities = 160/184 (86%) Strand = Plus / Plus Query: 347 ggcgacgaccacgacgagatcgacttcgagttcctgggcaacgagacgggccagccctac 406 |||||| | ||||||||||||||||||||||||||||||||| | |||| |||||| Sbjct: 13230393 ggcgacaaacacgacgagatcgacttcgagttcctgggcaactccagcggcctcccctac 13230452 Query: 407 accatccacaccaacgtgttcgcggacggcgtgggcgccaaggagatgcagttctacccc 466 ||| ||||||||||||| ||||| |||||||| ||| | |||||||||||| |||| Sbjct: 13230453 accttccacaccaacgtcttcgccgacggcgtcggcagccgcgagatgcagttccgcccc 13230512 Query: 467 tggttcgaccccaccgccgacttccacaactacaccatcttctggaacccctccatgatc 526 |||||||||||||||| || || ||||||||||||||||||||||||||||| ||||||| Sbjct: 13230513 tggttcgaccccaccgacggctaccacaactacaccatcttctggaacccctgcatgatc 13230572 Query: 527 gtgt 530 |||| Sbjct: 13230573 gtgt 13230576 Score = 129 bits (65), Expect = 1e-26 Identities = 125/145 (86%) Strand = Plus / Plus Query: 82 cgtcgccgtcgtggccttcgcggcggtgctgaagctcgggctcgtcggcgccaacttcgc 141 ||||| |||||| ||| | ||||||||||| |||| ||||||||||| ||||||||| Sbjct: 13229350 cgtcgtcgtcgtcgccgtggcggcggtgctcgagctggggctcgtcggagccaacttcca 13229409 Query: 142 ggacctgtgcgacatcacgtgggagccgcagaacgccgcgatgacggacggaggggagca 201 ||| | ||| ||||||||||||||||| ||||||||| ||||||||| ||||| || || Sbjct: 13229410 ggatcagtgtgacatcacgtgggagccacagaacgccaagatgacggagggaggagacca 13229469 Query: 202 cctcacgctctccctcgtcagcaac 226 ||||||||||||||| ||||||||| Sbjct: 13229470 cctcacgctctcccttgtcagcaac 13229494 Score = 103 bits (52), Expect = 7e-19 Identities = 90/103 (87%) Strand = Plus / Plus Query: 529 gtggttcgtggacagcatcccgatccgcgtgttccgcaactacgcngagcagggcgtgcc 588 ||||||||||||||||||||| ||| | |||||||| ||| ||| || | || ||||| Sbjct: 13232600 gtggttcgtggacagcatcccaatcagggtgttccggaaccacgagaaggaaggggtgcc 13232659 Query: 589 gttcccgacgaagcggccgatgtacggcttctccagcatctgg 631 ||||||||| |||||||||||||||| |||||||||||||||| Sbjct: 13232660 gttcccgacaaagcggccgatgtacgccttctccagcatctgg 13232702 Score = 81.8 bits (41), Expect = 3e-12 Identities = 83/97 (85%) Strand = Plus / Plus Query: 237 gtatgctccggaccaagaagacgttcatctacggcagcatatccaccttgatcaagctgg 296 |||||||||||||||||||| |||||||||||||||| | || || ||| |||| | Sbjct: 13230178 gtatgctccggaccaagaagcagttcatctacggcagcgtgtcgactcgcatccagcttg 13230237 Query: 297 tcaagggcaactccgccggcaccgtcacaacctacta 333 | ||||||||||| |||||||||||||| |||||||| Sbjct: 13230238 tgaagggcaactcggccggcaccgtcaccacctacta 13230274 Score = 77.8 bits (39), Expect = 4e-11 Identities = 48/51 (94%) Strand = Plus / Plus Query: 466 ctggttcgaccccaccgccgacttccacaactacaccatcttctggaaccc 516 ||||||||||||||||||||||||||||| |||| ||||| |||||||||| Sbjct: 28754824 ctggttcgaccccaccgccgacttccacacctactccatcctctggaaccc 28754874 Score = 73.8 bits (37), Expect = 6e-10 Identities = 64/73 (87%) Strand = Plus / Plus Query: 355 ccacgacgagatcgacttcgagttcctgggcaacgagacgggccagccctacaccatcca 414 |||||| ||||||||||||||||||||||| |||| ||| ||| |||| ||||| | || Sbjct: 28749973 ccacgatgagatcgacttcgagttcctggggaacgtgaccggcgagccgtacacgctgca 28750032 Query: 415 caccaacgtgttc 427 ||||||||||||| Sbjct: 28750033 caccaacgtgttc 28750045 Score = 67.9 bits (34), Expect = 4e-08 Identities = 61/70 (87%) Strand = Plus / Plus Query: 356 cacgacgagatcgacttcgagttcctgggcaacgagacgggccagccctacaccatccac 415 ||||||||||||||||||||||||||||| |||| || ||| |||| ||||| | ||| Sbjct: 28761710 cacgacgagatcgacttcgagttcctggggaacgcgagcggcgagccgtacacggtgcac 28761769 Query: 416 accaacgtgt 425 |||||||||| Sbjct: 28761770 accaacgtgt 28761779 Score = 58.0 bits (29), Expect = 4e-05 Identities = 59/69 (85%) Strand = Plus / Minus Query: 449 gagatgcagttctacccctggttcgaccccaccgccgacttccacaactacaccatcttc 508 |||||||||||| || ||||| |||||||||| |||||||||| |||| ||||| || Sbjct: 28773659 gagatgcagttccgcctctggtacgaccccaccaaggacttccacacctactccatcctc 28773600 Query: 509 tggaacccc 517 ||||||||| Sbjct: 28773599 tggaacccc 28773591 Score = 58.0 bits (29), Expect = 4e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 466 ctggttcgaccccaccgccgacttccacaactacaccatcttctggaacccct 518 ||||||||||||| | ||||||||||| ||||| ||||| |||||||||||| Sbjct: 7156115 ctggttcgaccccgctgccgacttccatgactactccatcctctggaacccct 7156063 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Minus Query: 362 gagatcgacttcgagttcctgggcaacgagacgggccagccctacaccatccacaccaac 421 ||||||||||||||||||||||| || | ||| || |||| ||||| | ||||||||| Sbjct: 28773746 gagatcgacttcgagttcctggggaatgtgaccggggagccgtacacgctgcacaccaac 28773687 Query: 422 gtgttc 427 |||||| Sbjct: 28773686 gtgttc 28773681 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 356 cacgacgagatcgacttcgagttcctgggcaacg 389 ||||||||| | |||||||||||||||||||||| Sbjct: 28754714 cacgacgaggtggacttcgagttcctgggcaacg 28754747 Score = 48.1 bits (24), Expect = 0.036 Identities = 30/32 (93%) Strand = Plus / Minus Query: 302 ggcaactccgccggcaccgtcacaacctacta 333 ||||||||||||||||||||||| ||||||| Sbjct: 28773881 ggcaactccgccggcaccgtcaccgcctacta 28773850 Score = 48.1 bits (24), Expect = 0.036 Identities = 27/28 (96%) Strand = Plus / Plus Query: 302 ggcaactccgccggcaccgtcacaacct 329 ||||||||||||||||||||||| |||| Sbjct: 28749786 ggcaactccgccggcaccgtcaccacct 28749813 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 358 cgacgagatcgacttcgagttcctgggcaac 388 ||||||| | ||||||||||||||||||||| Sbjct: 4973855 cgacgagctggacttcgagttcctgggcaac 4973825 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 358 cgacgagatcgacttcgagttcctgggcaac 388 ||||||| | ||||||||||||||||||||| Sbjct: 4958743 cgacgagctggacttcgagttcctgggcaac 4958713 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 302 ggcaactccgccggcaccgtc 322 ||||||||||||||||||||| Sbjct: 28761566 ggcaactccgccggcaccgtc 28761586
>dbj|AP004784.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0012F14 Length = 168629 Score = 174 bits (88), Expect = 2e-40 Identities = 160/184 (86%) Strand = Plus / Plus Query: 347 ggcgacgaccacgacgagatcgacttcgagttcctgggcaacgagacgggccagccctac 406 |||||| | ||||||||||||||||||||||||||||||||| | |||| |||||| Sbjct: 147581 ggcgacaaacacgacgagatcgacttcgagttcctgggcaactccagcggcctcccctac 147640 Query: 407 accatccacaccaacgtgttcgcggacggcgtgggcgccaaggagatgcagttctacccc 466 ||| ||||||||||||| ||||| |||||||| ||| | |||||||||||| |||| Sbjct: 147641 accttccacaccaacgtcttcgccgacggcgtcggcagccgcgagatgcagttccgcccc 147700 Query: 467 tggttcgaccccaccgccgacttccacaactacaccatcttctggaacccctccatgatc 526 |||||||||||||||| || || ||||||||||||||||||||||||||||| ||||||| Sbjct: 147701 tggttcgaccccaccgacggctaccacaactacaccatcttctggaacccctgcatgatc 147760 Query: 527 gtgt 530 |||| Sbjct: 147761 gtgt 147764 Score = 129 bits (65), Expect = 1e-26 Identities = 125/145 (86%) Strand = Plus / Plus Query: 82 cgtcgccgtcgtggccttcgcggcggtgctgaagctcgggctcgtcggcgccaacttcgc 141 ||||| |||||| ||| | ||||||||||| |||| ||||||||||| ||||||||| Sbjct: 146538 cgtcgtcgtcgtcgccgtggcggcggtgctcgagctggggctcgtcggagccaacttcca 146597 Query: 142 ggacctgtgcgacatcacgtgggagccgcagaacgccgcgatgacggacggaggggagca 201 ||| | ||| ||||||||||||||||| ||||||||| ||||||||| ||||| || || Sbjct: 146598 ggatcagtgtgacatcacgtgggagccacagaacgccaagatgacggagggaggagacca 146657 Query: 202 cctcacgctctccctcgtcagcaac 226 ||||||||||||||| ||||||||| Sbjct: 146658 cctcacgctctcccttgtcagcaac 146682 Score = 103 bits (52), Expect = 7e-19 Identities = 90/103 (87%) Strand = Plus / Plus Query: 529 gtggttcgtggacagcatcccgatccgcgtgttccgcaactacgcngagcagggcgtgcc 588 ||||||||||||||||||||| ||| | |||||||| ||| ||| || | || ||||| Sbjct: 149788 gtggttcgtggacagcatcccaatcagggtgttccggaaccacgagaaggaaggggtgcc 149847 Query: 589 gttcccgacgaagcggccgatgtacggcttctccagcatctgg 631 ||||||||| |||||||||||||||| |||||||||||||||| Sbjct: 149848 gttcccgacaaagcggccgatgtacgccttctccagcatctgg 149890 Score = 81.8 bits (41), Expect = 3e-12 Identities = 83/97 (85%) Strand = Plus / Plus Query: 237 gtatgctccggaccaagaagacgttcatctacggcagcatatccaccttgatcaagctgg 296 |||||||||||||||||||| |||||||||||||||| | || || ||| |||| | Sbjct: 147366 gtatgctccggaccaagaagcagttcatctacggcagcgtgtcgactcgcatccagcttg 147425 Query: 297 tcaagggcaactccgccggcaccgtcacaacctacta 333 | ||||||||||| |||||||||||||| |||||||| Sbjct: 147426 tgaagggcaactcggccggcaccgtcaccacctacta 147462
>emb|AJ295945.1|FPR295945 Festuca pratensis mRNA for Xet3 protein Length = 1205 Score = 159 bits (80), Expect = 1e-35 Identities = 230/278 (82%), Gaps = 3/278 (1%) Strand = Plus / Plus Query: 359 gacgagatcgacttcgagttcctgggcaacgagacgggccagccctacaccatccacacc 418 ||||| |||||||||||||||||||| |||||||| || |||||||||||| | |||||| Sbjct: 424 gacgaaatcgacttcgagttcctggggaacgagaccggacagccctacaccctgcacacc 483 Query: 419 aacgtgttcgcggacggcgtgggcgccaaggagatgcagttctacccctggttcgacccc 478 ||||| | ||| |||||||| ||| |||||||||||||||| ||||||||||||||| Sbjct: 484 aacgtctacgccgacggcgtcggcaacaaggagatgcagttcgtgccctggttcgacccc 543 Query: 479 accgccgacttccacaactacaccatcttctggaacccctccatgatcgtgtggttcgtg 538 |||| || | |||||| |||||||||| ||||| |||| ||||||||| |||| ||| Sbjct: 544 accggcggttaccacaagtacaccatctcctggacgccctgcatgatcgtctggtacgtc 603 Query: 539 gacagcatcccgatccgcgtgttccgcaactac--gcngagc-agggcgtgccgttcccg 595 ||| | |||| ||||| || |||||||| ||| | |||| | |||||| | |||||| Sbjct: 604 gacgacctccccatccgggtcttccgcaattaccgccagagcaacggcgtggccttcccg 663 Query: 596 acgaagcggccgatgtacggcttctccagcatctggtc 633 |||| || || ||||||| || ||||||||||||||| Sbjct: 664 acgagccgccccatgtacgcctactccagcatctggtc 701
>gb|AY103775.1| Zea mays PCO076979 mRNA sequence Length = 1495 Score = 117 bits (59), Expect = 5e-23 Identities = 110/127 (86%) Strand = Plus / Plus Query: 301 gggcaactccgccggcaccgtcacaacctactatacgtcgtcggtgggcgacgaccacga 360 |||||||||||||||||||||||| ||||||| ||||||| ||||| || ||||| Sbjct: 380 gggcaactccgccggcaccgtcaccgcctactacctgtcgtcgcagggcggcgcgcacga 439 Query: 361 cgagatcgacttcgagttcctgggcaacgagacgggccagccctacaccatccacaccaa 420 ||||||||||||||||||||||||||||| | | ||| |||||||||| | |||||||| Sbjct: 440 cgagatcgacttcgagttcctgggcaacgtgtccggcgagccctacacgctgcacaccaa 499 Query: 421 cgtgttc 427 ||||||| Sbjct: 500 cgtgttc 506 Score = 79.8 bits (40), Expect = 1e-11 Identities = 49/52 (94%) Strand = Plus / Plus Query: 466 ctggttcgaccccaccgccgacttccacaactacaccatcttctggaacccc 517 ||||||||||||||||||||||||||||| |||| ||||| ||||||||||| Sbjct: 545 ctggttcgaccccaccgccgacttccacacctactccatcctctggaacccc 596
>ref|XM_473793.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 966 Score = 111 bits (56), Expect = 3e-21 Identities = 62/64 (96%) Strand = Plus / Plus Query: 454 gcagttctacccctggttcgaccccaccgccgacttccacaactacaccatcttctggaa 513 ||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 435 gcagttctacctctggttcgaccccaccgccgacttccacaactacaccatcctctggaa 494 Query: 514 cccc 517 |||| Sbjct: 495 cccc 498 Score = 69.9 bits (35), Expect = 1e-08 Identities = 65/75 (86%) Strand = Plus / Plus Query: 356 cacgacgagatcgacttcgagttcctgggcaacgagacgggccagccctacaccatccac 415 ||||||||||||||||||||||||||||| |||| || ||| |||| ||| || ||| Sbjct: 337 cacgacgagatcgacttcgagttcctggggaacgtgagcggcgagccgtacgtgatgcac 396 Query: 416 accaacgtgttcgcg 430 ||||||||||||||| Sbjct: 397 accaacgtgttcgcg 411
>emb|AL662996.3|OSJN00198 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0015N08, complete sequence Length = 129037 Score = 111 bits (56), Expect = 3e-21 Identities = 62/64 (96%) Strand = Plus / Minus Query: 454 gcagttctacccctggttcgaccccaccgccgacttccacaactacaccatcttctggaa 513 ||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 32615 gcagttctacctctggttcgaccccaccgccgacttccacaactacaccatcctctggaa 32556 Query: 514 cccc 517 |||| Sbjct: 32555 cccc 32552 Score = 99.6 bits (50), Expect = 1e-17 Identities = 134/162 (82%) Strand = Plus / Plus Query: 356 cacgacgagatcgacttcgagttcctgggcaacgagacgggccagccctacaccatccac 415 ||||||||||||||| | |||||||| ||||||| || ||| |||| ||||| ||||| Sbjct: 29159 cacgacgagatcgacctggagttcctcggcaacgtcaccggcgagccatacacgctccac 29218 Query: 416 accaacgtgttcgcggacggcgtgggcgccaaggagatgcagttctacccctggttcgac 475 |||||| | ||||| ||||||| |||| | ||| ||||||| || |||||||||| Sbjct: 29219 accaacatcttcgccaacggcgtcggcggccgcgagcagcagttccgcctctggttcgac 29278 Query: 476 cccaccgccgacttccacaactacaccatcttctggaacccc 517 ||||||||||||| ||||| |||| ||||| ||||||||||| Sbjct: 29279 cccaccgccgactaccacacctactccatcgtctggaacccc 29320 Score = 69.9 bits (35), Expect = 1e-08 Identities = 65/75 (86%) Strand = Plus / Minus Query: 356 cacgacgagatcgacttcgagttcctgggcaacgagacgggccagccctacaccatccac 415 ||||||||||||||||||||||||||||| |||| || ||| |||| ||| || ||| Sbjct: 32713 cacgacgagatcgacttcgagttcctggggaacgtgagcggcgagccgtacgtgatgcac 32654 Query: 416 accaacgtgttcgcg 430 ||||||||||||||| Sbjct: 32653 accaacgtgttcgcg 32639 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 578 cagggcgtgccgttcccgacg 598 ||||||||||||||||||||| Sbjct: 29495 cagggcgtgccgttcccgacg 29515
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 111 bits (56), Expect = 3e-21 Identities = 62/64 (96%) Strand = Plus / Minus Query: 454 gcagttctacccctggttcgaccccaccgccgacttccacaactacaccatcttctggaa 513 ||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 30556907 gcagttctacctctggttcgaccccaccgccgacttccacaactacaccatcctctggaa 30556848 Query: 514 cccc 517 |||| Sbjct: 30556847 cccc 30556844 Score = 99.6 bits (50), Expect = 1e-17 Identities = 134/162 (82%) Strand = Plus / Plus Query: 356 cacgacgagatcgacttcgagttcctgggcaacgagacgggccagccctacaccatccac 415 ||||||||||||||| | |||||||| ||||||| || ||| |||| ||||| ||||| Sbjct: 30553451 cacgacgagatcgacctggagttcctcggcaacgtcaccggcgagccatacacgctccac 30553510 Query: 416 accaacgtgttcgcggacggcgtgggcgccaaggagatgcagttctacccctggttcgac 475 |||||| | ||||| ||||||| |||| | ||| ||||||| || |||||||||| Sbjct: 30553511 accaacatcttcgccaacggcgtcggcggccgcgagcagcagttccgcctctggttcgac 30553570 Query: 476 cccaccgccgacttccacaactacaccatcttctggaacccc 517 ||||||||||||| ||||| |||| ||||| ||||||||||| Sbjct: 30553571 cccaccgccgactaccacacctactccatcgtctggaacccc 30553612 Score = 69.9 bits (35), Expect = 1e-08 Identities = 65/75 (86%) Strand = Plus / Minus Query: 356 cacgacgagatcgacttcgagttcctgggcaacgagacgggccagccctacaccatccac 415 ||||||||||||||||||||||||||||| |||| || ||| |||| ||| || ||| Sbjct: 30557005 cacgacgagatcgacttcgagttcctggggaacgtgagcggcgagccgtacgtgatgcac 30556946 Query: 416 accaacgtgttcgcg 430 ||||||||||||||| Sbjct: 30556945 accaacgtgttcgcg 30556931 Score = 69.9 bits (35), Expect = 1e-08 Identities = 53/59 (89%) Strand = Plus / Minus Query: 454 gcagttctacccctggttcgaccccaccgccgacttccacaactacaccatcttctgga 512 ||||||| ||| |||||||||||||||| |||||||||||| |||| ||||| |||||| Sbjct: 30516926 gcagttccacctctggttcgaccccaccaccgacttccacacctactccatcgtctgga 30516868 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 467 tggttcgaccccaccgccgacttccacaactacaccatcttctggaacccc 517 |||||||||||||||||||||||||||| |||| || | ||||||||||| Sbjct: 32180532 tggttcgaccccaccgccgacttccacacctacgccgtgctctggaacccc 32180582 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 355 ccacgacgagatcgacttcgagttcctgggcaacg 389 |||||||||||||||| | |||||||||||||||| Sbjct: 30508421 ccacgacgagatcgacctggagttcctgggcaacg 30508387 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 360 acgagatcgacttcgagttcctgggcaacg 389 ||||| |||||||||||||||||||||||| Sbjct: 32180425 acgagttcgacttcgagttcctgggcaacg 32180454 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 578 cagggcgtgccgttcccgacg 598 ||||||||||||||||||||| Sbjct: 30553787 cagggcgtgccgttcccgacg 30553807 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 122 ctcgtcggcgccaacttcgc 141 |||||||||||||||||||| Sbjct: 25342723 ctcgtcggcgccaacttcgc 25342742
>dbj|AK059203.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-A11, full insert sequence Length = 1234 Score = 111 bits (56), Expect = 3e-21 Identities = 62/64 (96%) Strand = Plus / Plus Query: 454 gcagttctacccctggttcgaccccaccgccgacttccacaactacaccatcttctggaa 513 ||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 503 gcagttctacctctggttcgaccccaccgccgacttccacaactacaccatcctctggaa 562 Query: 514 cccc 517 |||| Sbjct: 563 cccc 566 Score = 69.9 bits (35), Expect = 1e-08 Identities = 65/75 (86%) Strand = Plus / Plus Query: 356 cacgacgagatcgacttcgagttcctgggcaacgagacgggccagccctacaccatccac 415 ||||||||||||||||||||||||||||| |||| || ||| |||| ||| || ||| Sbjct: 405 cacgacgagatcgacttcgagttcctggggaacgtgagcggcgagccgtacgtgatgcac 464 Query: 416 accaacgtgttcgcg 430 ||||||||||||||| Sbjct: 465 accaacgtgttcgcg 479
>emb|X93175.1|HVXETXEB H.vulgare mRNA for xyloglucan endotransglycosylase-like protein (XEB) Length = 1226 Score = 107 bits (54), Expect = 4e-20 Identities = 113/130 (86%), Gaps = 2/130 (1%) Strand = Plus / Plus Query: 302 ggcaactccgccggcaccgtcacaacctactatacgtcgtcggtgggcgacgac-cacga 360 ||||||||||||||||||||||| |||| ||| ||||||| ||| |||| | ||||| Sbjct: 338 ggcaactccgccggcaccgtcaccaccttctacctgtcgtcgcaggg-gacggcgcacga 396 Query: 361 cgagatcgacttcgagttcctgggcaacgagacgggccagccctacaccatccacaccaa 420 ||||||||||||||||||||||||||||| || ||| |||||||||| | |||||||| Sbjct: 397 cgagatcgacttcgagttcctgggcaacgtcaccggcgagccctacacgctgcacaccaa 456 Query: 421 cgtgttcgcg 430 |||||||||| Sbjct: 457 cgtgttcgcg 466 Score = 46.1 bits (23), Expect = 0.14 Identities = 44/51 (86%) Strand = Plus / Plus Query: 466 ctggttcgaccccaccgccgacttccacaactacaccatcttctggaaccc 516 |||||||||||||||| | |||||||| |||| ||||| |||||||||| Sbjct: 502 ctggttcgaccccaccaaggccttccacacctactccatcatctggaaccc 552
>gb|AY589589.1| Triticum aestivum endotransglucosylase/hydrolase XTH5 mRNA, complete cds Length = 1056 Score = 107 bits (54), Expect = 4e-20 Identities = 113/130 (86%), Gaps = 2/130 (1%) Strand = Plus / Plus Query: 302 ggcaactccgccggcaccgtcacaacctactatacgtcgtcggtgggcgacgac-cacga 360 ||||||||||||||||||||||| |||| ||| ||||||| ||| |||| | ||||| Sbjct: 232 ggcaactccgccggcaccgtcaccaccttctacctgtcgtcgcaggg-gacggcgcacga 290 Query: 361 cgagatcgacttcgagttcctgggcaacgagacgggccagccctacaccatccacaccaa 420 ||||||||||||||||||||||||||||| || ||| |||||||||| | |||||||| Sbjct: 291 cgagatcgacttcgagttcctgggcaacgtcaccggcgagccctacacgctgcacaccaa 350 Query: 421 cgtgttcgcg 430 |||||||||| Sbjct: 351 cgtgttcgcg 360 Score = 46.1 bits (23), Expect = 0.14 Identities = 44/51 (86%) Strand = Plus / Plus Query: 466 ctggttcgaccccaccgccgacttccacaactacaccatcttctggaaccc 516 |||||||||||||||| | |||||||| |||| ||||| |||||||||| Sbjct: 396 ctggttcgaccccaccaaggccttccacacctactccatcatctggaaccc 446
>ref|XM_473792.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 570 Score = 99.6 bits (50), Expect = 1e-17 Identities = 134/162 (82%) Strand = Plus / Plus Query: 356 cacgacgagatcgacttcgagttcctgggcaacgagacgggccagccctacaccatccac 415 ||||||||||||||| | |||||||| ||||||| || ||| |||| ||||| ||||| Sbjct: 325 cacgacgagatcgacctggagttcctcggcaacgtcaccggcgagccatacacgctccac 384 Query: 416 accaacgtgttcgcggacggcgtgggcgccaaggagatgcagttctacccctggttcgac 475 |||||| | ||||| ||||||| |||| | ||| ||||||| || |||||||||| Sbjct: 385 accaacatcttcgccaacggcgtcggcggccgcgagcagcagttccgcctctggttcgac 444 Query: 476 cccaccgccgacttccacaactacaccatcttctggaacccc 517 ||||||||||||| ||||| |||| ||||| ||||||||||| Sbjct: 445 cccaccgccgactaccacacctactccatcgtctggaacccc 486 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 578 cagggcgtgccgttcccgacg 598 ||||||||||||||||||||| Sbjct: 547 cagggcgtgccgttcccgacg 567
>ref|NM_187656.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 783 Score = 91.7 bits (46), Expect = 3e-15 Identities = 64/70 (91%) Strand = Plus / Plus Query: 448 ggagatgcagttctacccctggttcgaccccaccgccgacttccacaactacaccatctt 507 |||||||| |||| ||| |||||||||||||||||||||||||||| ||||| ||||| | Sbjct: 339 ggagatgcggttccacctctggttcgaccccaccgccgacttccaccactacgccatcct 398 Query: 508 ctggaacccc 517 |||||||||| Sbjct: 399 ctggaacccc 408
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 91.7 bits (46), Expect = 3e-15 Identities = 64/70 (91%) Strand = Plus / Minus Query: 448 ggagatgcagttctacccctggttcgaccccaccgccgacttccacaactacaccatctt 507 |||||||| |||| ||| |||||||||||||||||||||||||||| ||||| ||||| | Sbjct: 471784 ggagatgcggttccacctctggttcgaccccaccgccgacttccaccactacgccatcct 471725 Query: 508 ctggaacccc 517 |||||||||| Sbjct: 471724 ctggaacccc 471715 Score = 48.1 bits (24), Expect = 0.036 Identities = 30/32 (93%) Strand = Plus / Plus Query: 359 gacgagatcgacttcgagttcctgggcaacga 390 ||||||||||||||||||||||| ||| |||| Sbjct: 944218 gacgagatcgacttcgagttcctcggccacga 944249 Score = 44.1 bits (22), Expect = 0.56 Identities = 31/34 (91%) Strand = Plus / Minus Query: 356 cacgacgagatcgacttcgagttcctgggcaacg 389 ||||||||| | ||||||||||||||||| |||| Sbjct: 7311666 cacgacgagctggacttcgagttcctggggaacg 7311633 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Minus Query: 356 cacgacgagatcgacttcgagttcctgggcaac 388 ||||||||| | |||||||||||| |||||||| Sbjct: 35691472 cacgacgagctggacttcgagttcttgggcaac 35691440
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 91.7 bits (46), Expect = 3e-15 Identities = 64/70 (91%) Strand = Plus / Minus Query: 448 ggagatgcagttctacccctggttcgaccccaccgccgacttccacaactacaccatctt 507 |||||||| |||| ||| |||||||||||||||||||||||||||| ||||| ||||| | Sbjct: 471782 ggagatgcggttccacctctggttcgaccccaccgccgacttccaccactacgccatcct 471723 Query: 508 ctggaacccc 517 |||||||||| Sbjct: 471722 ctggaacccc 471713 Score = 48.1 bits (24), Expect = 0.036 Identities = 30/32 (93%) Strand = Plus / Plus Query: 359 gacgagatcgacttcgagttcctgggcaacga 390 ||||||||||||||||||||||| ||| |||| Sbjct: 944216 gacgagatcgacttcgagttcctcggccacga 944247 Score = 44.1 bits (22), Expect = 0.56 Identities = 31/34 (91%) Strand = Plus / Minus Query: 356 cacgacgagatcgacttcgagttcctgggcaacg 389 ||||||||| | ||||||||||||||||| |||| Sbjct: 7309561 cacgacgagctggacttcgagttcctggggaacg 7309528 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Minus Query: 356 cacgacgagatcgacttcgagttcctgggcaac 388 ||||||||| | |||||||||||| |||||||| Sbjct: 35781545 cacgacgagctggacttcgagttcttgggcaac 35781513
>dbj|AK119538.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-C03, full insert sequence Length = 1281 Score = 91.7 bits (46), Expect = 3e-15 Identities = 64/70 (91%) Strand = Plus / Plus Query: 448 ggagatgcagttctacccctggttcgaccccaccgccgacttccacaactacaccatctt 507 |||||||| |||| ||| |||||||||||||||||||||||||||| ||||| ||||| | Sbjct: 659 ggagatgcggttccacctctggttcgaccccaccgccgacttccaccactacgccatcct 718 Query: 508 ctggaacccc 517 |||||||||| Sbjct: 719 ctggaacccc 728
>dbj|AK061126.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-207-G12, full insert sequence Length = 1193 Score = 91.7 bits (46), Expect = 3e-15 Identities = 64/70 (91%) Strand = Plus / Plus Query: 448 ggagatgcagttctacccctggttcgaccccaccgccgacttccacaactacaccatctt 507 |||||||| |||| ||| |||||||||||||||||||||||||||| ||||| ||||| | Sbjct: 571 ggagatgcggttccacctctggttcgaccccaccgccgacttccaccactacgccatcct 630 Query: 508 ctggaacccc 517 |||||||||| Sbjct: 631 ctggaacccc 640
>gb|AC113930.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1384D03, complete sequence Length = 116214 Score = 91.7 bits (46), Expect = 3e-15 Identities = 64/70 (91%) Strand = Plus / Minus Query: 448 ggagatgcagttctacccctggttcgaccccaccgccgacttccacaactacaccatctt 507 |||||||| |||| ||| |||||||||||||||||||||||||||| ||||| ||||| | Sbjct: 70244 ggagatgcggttccacctctggttcgaccccaccgccgacttccaccactacgccatcct 70185 Query: 508 ctggaacccc 517 |||||||||| Sbjct: 70184 ctggaacccc 70175
>ref|XM_480875.1| Oryza sativa (japonica cultivar-group), mRNA Length = 906 Score = 87.7 bits (44), Expect = 4e-14 Identities = 134/164 (81%) Strand = Plus / Plus Query: 354 accacgacgagatcgacttcgagttcctgggcaacgagacgggccagccctacaccatcc 413 ||||||||||| | ||| | |||||||| || |||| || ||| ||||||||||| | | Sbjct: 344 accacgacgaggtggacctggagttcctcgggaacgtcaccggcgagccctacaccctgc 403 Query: 414 acaccaacgtgttcgcggacggcgtgggcgccaaggagatgcagttctacccctggttcg 473 |||||||| | ||||| | ||||| |||| | ||| ||||||| || |||||||| Sbjct: 404 acaccaacatcttcgccaatggcgtcggcggccgcgagcagcagttccgcctctggttcg 463 Query: 474 accccaccgccgacttccacaactacaccatcttctggaacccc 517 ||||||||||||||||||||| |||| ||||| ||||||||||| Sbjct: 464 accccaccgccgacttccacacctactccatcgtctggaacccc 507 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 304 caactccgccggcaccgtcac 324 ||||||||||||||||||||| Sbjct: 285 caactccgccggcaccgtcac 305
>gb|BT019084.1| Zea mays clone Contig673.F mRNA sequence Length = 977 Score = 87.7 bits (44), Expect = 4e-14 Identities = 136/164 (82%), Gaps = 2/164 (1%) Strand = Plus / Minus Query: 337 gtcgtcggtgggcgacgaccacgacgagatcgacttcgagttcctgggcaacgagacggg 396 ||||||| |||||||| ||||||||||||||| | |||||||||||||||| | |||| Sbjct: 817 gtcgtcgcagggcgacgcgcacgacgagatcgacctggagttcctgggcaacgtgtcggg 758 Query: 397 ccagccctacaccatccacaccaacgtgttcgcg-gacggcgtgggcgccaaggagatgc 455 | |||||||||| | ||||| ||||||||| || | |||| |||| | |||| || Sbjct: 757 cgagccctacacgctgcacacgaacgtgttcacgcgcgggcgggggcagc-gggagcagc 699 Query: 456 agttctacccctggttcgaccccaccgccgacttccacaactac 499 ||||| || ||||||||||||||||||||||||||||| |||| Sbjct: 698 agttccgcctctggttcgaccccaccgccgacttccacacctac 655
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 87.7 bits (44), Expect = 4e-14 Identities = 134/164 (81%) Strand = Plus / Minus Query: 354 accacgacgagatcgacttcgagttcctgggcaacgagacgggccagccctacaccatcc 413 ||||||||||| | ||| | |||||||| || |||| || ||| ||||||||||| | | Sbjct: 8379002 accacgacgaggtggacctggagttcctcgggaacgtcaccggcgagccctacaccctgc 8378943 Query: 414 acaccaacgtgttcgcggacggcgtgggcgccaaggagatgcagttctacccctggttcg 473 |||||||| | ||||| | ||||| |||| | ||| ||||||| || |||||||| Sbjct: 8378942 acaccaacatcttcgccaatggcgtcggcggccgcgagcagcagttccgcctctggttcg 8378883 Query: 474 accccaccgccgacttccacaactacaccatcttctggaacccc 517 ||||||||||||||||||||| |||| ||||| ||||||||||| Sbjct: 8378882 accccaccgccgacttccacacctactccatcgtctggaacccc 8378839 Score = 77.8 bits (39), Expect = 4e-11 Identities = 54/59 (91%) Strand = Plus / Plus Query: 455 cagttctacccctggttcgaccccaccgccgacttccacaactacaccatcttctggaa 513 |||||||||| ||||||||||||||||||||||||||||| ||||| ||| ||||||| Sbjct: 8322125 cagttctacctctggttcgaccccaccgccgacttccacacctacaagatcatctggaa 8322183 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 346 gggcgacgaccacgacgagatcgacttcgagttcctgggcaac 388 |||||||| |||||||||||||||| |||||||| |||||||| Sbjct: 8322016 gggcgacggccacgacgagatcgacatcgagttcatgggcaac 8322058 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 302 ggcaactccgccggcaccgtcac 324 ||||||||||||||||||||||| Sbjct: 8321969 ggcaactccgccggcaccgtcac 8321991 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 304 caactccgccggcaccgtcac 324 ||||||||||||||||||||| Sbjct: 8379172 caactccgccggcaccgtcac 8379152
>dbj|AP004705.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0682A06 Length = 142023 Score = 87.7 bits (44), Expect = 4e-14 Identities = 134/164 (81%) Strand = Plus / Minus Query: 354 accacgacgagatcgacttcgagttcctgggcaacgagacgggccagccctacaccatcc 413 ||||||||||| | ||| | |||||||| || |||| || ||| ||||||||||| | | Sbjct: 119111 accacgacgaggtggacctggagttcctcgggaacgtcaccggcgagccctacaccctgc 119052 Query: 414 acaccaacgtgttcgcggacggcgtgggcgccaaggagatgcagttctacccctggttcg 473 |||||||| | ||||| | ||||| |||| | ||| ||||||| || |||||||| Sbjct: 119051 acaccaacatcttcgccaatggcgtcggcggccgcgagcagcagttccgcctctggttcg 118992 Query: 474 accccaccgccgacttccacaactacaccatcttctggaacccc 517 ||||||||||||||||||||| |||| ||||| ||||||||||| Sbjct: 118991 accccaccgccgacttccacacctactccatcgtctggaacccc 118948 Score = 77.8 bits (39), Expect = 4e-11 Identities = 54/59 (91%) Strand = Plus / Plus Query: 455 cagttctacccctggttcgaccccaccgccgacttccacaactacaccatcttctggaa 513 |||||||||| ||||||||||||||||||||||||||||| ||||| ||| ||||||| Sbjct: 62234 cagttctacctctggttcgaccccaccgccgacttccacacctacaagatcatctggaa 62292 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 346 gggcgacgaccacgacgagatcgacttcgagttcctgggcaac 388 |||||||| |||||||||||||||| |||||||| |||||||| Sbjct: 62125 gggcgacggccacgacgagatcgacatcgagttcatgggcaac 62167 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 302 ggcaactccgccggcaccgtcac 324 ||||||||||||||||||||||| Sbjct: 62078 ggcaactccgccggcaccgtcac 62100 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 304 caactccgccggcaccgtcac 324 ||||||||||||||||||||| Sbjct: 119281 caactccgccggcaccgtcac 119261
>gb|AY106776.1| Zea mays PCO076978 mRNA sequence Length = 974 Score = 87.7 bits (44), Expect = 4e-14 Identities = 136/164 (82%), Gaps = 2/164 (1%) Strand = Plus / Plus Query: 337 gtcgtcggtgggcgacgaccacgacgagatcgacttcgagttcctgggcaacgagacggg 396 ||||||| |||||||| ||||||||||||||| | |||||||||||||||| | |||| Sbjct: 387 gtcgtcgcagggcgacgcgcacgacgagatcgacctggagttcctgggcaacgtgtcggg 446 Query: 397 ccagccctacaccatccacaccaacgtgttcgcg-gacggcgtgggcgccaaggagatgc 455 | |||||||||| | ||||| ||||||||| || | |||| |||| | |||| || Sbjct: 447 cgagccctacacgctgcacacgaacgtgttcacgcgcgggcgggggcagc-gggagcagc 505 Query: 456 agttctacccctggttcgaccccaccgccgacttccacaactac 499 ||||| || ||||||||||||||||||||||||||||| |||| Sbjct: 506 agttccgcctctggttcgaccccaccgccgacttccacacctac 549
>emb|X93173.1|HVXETPM5 H.vulgare mRNA for xyloglucan endotransglycosylase-like protein (PM5) Length = 1188 Score = 85.7 bits (43), Expect = 2e-13 Identities = 58/63 (92%) Strand = Plus / Plus Query: 455 cagttctacccctggttcgaccccaccgccgacttccacaactacaccatcttctggaac 514 |||||||||| ||||||||||||||||||||||||||||| ||||| ||| |||||||| Sbjct: 464 cagttctacctctggttcgaccccaccgccgacttccacacctacaagatcgtctggaac 523 Query: 515 ccc 517 ||| Sbjct: 524 ccc 526 Score = 56.0 bits (28), Expect = 1e-04 Identities = 75/90 (83%), Gaps = 3/90 (3%) Strand = Plus / Plus Query: 302 ggcaactccgccggcaccgtcacaacctactatacgtcgtc---ggtgggcgacgaccac 358 ||||||||||||||||||||||| ||| ||| | |||| || |||||||| ||| Sbjct: 308 ggcaactccgccggcaccgtcacctccttctacctgacgtctggggagggcgacggccat 367 Query: 359 gacgagatcgacttcgagttcctgggcaac 388 |||||||||||| |||||||| |||||||| Sbjct: 368 gacgagatcgacatcgagttcatgggcaac 397
>gb|AY589587.1| Triticum aestivum endotransglucosylase/hydrolase XTH3 mRNA, complete cds Length = 938 Score = 85.7 bits (43), Expect = 2e-13 Identities = 58/63 (92%) Strand = Plus / Plus Query: 455 cagttctacccctggttcgaccccaccgccgacttccacaactacaccatcttctggaac 514 |||||||||| ||||||||||||||||||||||||||||| ||||| ||| |||||||| Sbjct: 452 cagttctacctctggttcgaccccaccgccgacttccacacctacaagatcgtctggaac 511 Query: 515 ccc 517 ||| Sbjct: 512 ccc 514 Score = 56.0 bits (28), Expect = 1e-04 Identities = 75/90 (83%), Gaps = 3/90 (3%) Strand = Plus / Plus Query: 302 ggcaactccgccggcaccgtcacaacctactatacgtcgtc---ggtgggcgacgaccac 358 ||||||||||||||||||||||| ||| ||| | |||| || |||||||| ||| Sbjct: 296 ggcaactccgccggcaccgtcacctccttctacctgacgtctggggagggcgacggccat 355 Query: 359 gacgagatcgacttcgagttcctgggcaac 388 |||||||||||| |||||||| |||||||| Sbjct: 356 gacgagatcgacatcgagttcatgggcaac 385
>gb|AY589586.1| Triticum aestivum endotransglucosylase/hydrolase XTH2 mRNA, complete cds Length = 1107 Score = 85.7 bits (43), Expect = 2e-13 Identities = 58/63 (92%) Strand = Plus / Plus Query: 455 cagttctacccctggttcgaccccaccgccgacttccacaactacaccatcttctggaac 514 |||||||||| ||||||||||||||||||||||||||||| ||||| ||| |||||||| Sbjct: 453 cagttctacctctggttcgaccccaccgccgacttccacacctacaagatcgtctggaac 512 Query: 515 ccc 517 ||| Sbjct: 513 ccc 515 Score = 56.0 bits (28), Expect = 1e-04 Identities = 75/90 (83%), Gaps = 3/90 (3%) Strand = Plus / Plus Query: 302 ggcaactccgccggcaccgtcacaacctactatacgtcgtc---ggtgggcgacgaccac 358 ||||||||||||||||||||||| ||| ||| | |||| || |||||||| ||| Sbjct: 297 ggcaactccgccggcaccgtcacctccttctacctgacgtccggggagggcgacgggcac 356 Query: 359 gacgagatcgacttcgagttcctgggcaac 388 |||||||||||| |||||||| |||||||| Sbjct: 357 gacgagatcgacatcgagttcatgggcaac 386
>gb|AY589585.1| Triticum aestivum endotransglucosylase/hydrolase XTH1 mRNA, complete cds Length = 958 Score = 85.7 bits (43), Expect = 2e-13 Identities = 58/63 (92%) Strand = Plus / Plus Query: 455 cagttctacccctggttcgaccccaccgccgacttccacaactacaccatcttctggaac 514 |||||||||| ||||||||||||||||||||||||||||| ||||| ||| |||||||| Sbjct: 453 cagttctacctctggttcgaccccaccgccgacttccacacctacaagatcgtctggaac 512 Query: 515 ccc 517 ||| Sbjct: 513 ccc 515 Score = 56.0 bits (28), Expect = 1e-04 Identities = 75/90 (83%), Gaps = 3/90 (3%) Strand = Plus / Plus Query: 302 ggcaactccgccggcaccgtcacaacctactatacgtcgtc---ggtgggcgacgaccac 358 ||||||||||||||||||||||| ||| ||| | |||| || |||||||| ||| Sbjct: 297 ggcaactccgccggcaccgtcacctccttctacctgacgtccggggagggcgacgggcac 356 Query: 359 gacgagatcgacttcgagttcctgggcaac 388 |||||||||||| |||||||| |||||||| Sbjct: 357 gacgagatcgacatcgagttcatgggcaac 386
>gb|BT014685.1| Oryza sativa AK104912 mRNA sequence Length = 807 Score = 83.8 bits (42), Expect = 6e-13 Identities = 108/128 (84%), Gaps = 4/128 (3%) Strand = Plus / Plus Query: 302 ggcaactccgccggcaccgtcacaacctactatacgtcgtcggtggg--cgacgaccacg 359 ||||||||||||||||||||||| |||| ||| ||||||| ||| |||| ||||| Sbjct: 226 ggcaactccgccggcaccgtcaccaccttctacttgtcgtcgcagggttcgac--ccacg 283 Query: 360 acgagatcgacttcgagttcctgggcaacgagacgggccagccctacaccatccacacca 419 | ||||||||||||||||||||||| |||| ||| ||| |||| ||||| | ||||||| Sbjct: 284 atgagatcgacttcgagttcctggggaacgtgaccggcgagccgtacacgctgcacacca 343 Query: 420 acgtgttc 427 |||||||| Sbjct: 344 acgtgttc 351
>emb|AJ295943.1|FPR295943 Festuca pratensis mRNA for Xet1 protein Length = 1187 Score = 83.8 bits (42), Expect = 6e-13 Identities = 66/74 (89%) Strand = Plus / Plus Query: 356 cacgacgagatcgacttcgagttcctgggcaacgagacgggccagccctacaccatccac 415 |||||| ||||||||||||||||||||||||||| |||||| |||||||||| | ||| Sbjct: 412 cacgacaagatcgacttcgagttcctgggcaacgtcacgggcgagccctacacgctgcac 471 Query: 416 accaacgtgttcgc 429 |||||||| ||||| Sbjct: 472 accaacgtcttcgc 485
>dbj|AK104912.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-C02, full insert sequence Length = 1208 Score = 83.8 bits (42), Expect = 6e-13 Identities = 108/128 (84%), Gaps = 4/128 (3%) Strand = Plus / Plus Query: 302 ggcaactccgccggcaccgtcacaacctactatacgtcgtcggtggg--cgacgaccacg 359 ||||||||||||||||||||||| |||| ||| ||||||| ||| |||| ||||| Sbjct: 334 ggcaactccgccggcaccgtcaccaccttctacttgtcgtcgcagggttcgac--ccacg 391 Query: 360 acgagatcgacttcgagttcctgggcaacgagacgggccagccctacaccatccacacca 419 | ||||||||||||||||||||||| |||| ||| ||| |||| ||||| | ||||||| Sbjct: 392 atgagatcgacttcgagttcctggggaacgtgaccggcgagccgtacacgctgcacacca 451 Query: 420 acgtgttc 427 |||||||| Sbjct: 452 acgtgttc 459
>dbj|AK104060.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-G01, full insert sequence Length = 1186 Score = 83.8 bits (42), Expect = 6e-13 Identities = 63/70 (90%) Strand = Plus / Plus Query: 448 ggagatgcagttctacccctggttcgaccccaccgccgacttccacaactacaccatctt 507 ||||||| |||| ||| |||||||||||||||||||||||||||| ||||| ||||| | Sbjct: 564 ggagatgtggttccacctctggttcgaccccaccgccgacttccaccactacgccatcct 623 Query: 508 ctggaacccc 517 |||||||||| Sbjct: 624 ctggaacccc 633
>dbj|AK066125.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013059H08, full insert sequence Length = 1208 Score = 83.8 bits (42), Expect = 6e-13 Identities = 108/128 (84%), Gaps = 4/128 (3%) Strand = Plus / Plus Query: 302 ggcaactccgccggcaccgtcacaacctactatacgtcgtcggtggg--cgacgaccacg 359 ||||||||||||||||||||||| |||| ||| ||||||| ||| |||| ||||| Sbjct: 334 ggcaactccgccggcaccgtcaccaccttctacttgtcgtcgcagggttcgac--ccacg 391 Query: 360 acgagatcgacttcgagttcctgggcaacgagacgggccagccctacaccatccacacca 419 | ||||||||||||||||||||||| |||| ||| ||| |||| ||||| | ||||||| Sbjct: 392 atgagatcgacttcgagttcctggggaacgtgaccggcgagccgtacacgctgcacacca 451 Query: 420 acgtgttc 427 |||||||| Sbjct: 452 acgtgttc 459
>gb|AY103891.1| Zea mays PCO065722 mRNA sequence Length = 1280 Score = 83.8 bits (42), Expect = 6e-13 Identities = 72/82 (87%) Strand = Plus / Plus Query: 346 gggcgacgaccacgacgagatcgacttcgagttcctgggcaacgagacgggccagcccta 405 |||||||| |||||||||||||||||||||||||||||||||| || || ||||||| Sbjct: 407 gggcgacgcgcacgacgagatcgacttcgagttcctgggcaacgtgagcggggagcccta 466 Query: 406 caccatccacaccaacgtgttc 427 ||| | ||||||||||||||| Sbjct: 467 cacgctgcacaccaacgtgttc 488
>ref|NM_187323.1| Oryza sativa (japonica cultivar-group), mRNA Length = 906 Score = 81.8 bits (41), Expect = 3e-12 Identities = 62/69 (89%) Strand = Plus / Plus Query: 449 gagatgcagttctacccctggttcgaccccaccgccgacttccacaactacaccatcttc 508 ||||||| ||| ||| |||||||||||||||||||||||||||| ||||| ||||| || Sbjct: 469 gagatgcgcttccacctctggttcgaccccaccgccgacttccaccactacgccatcctc 528 Query: 509 tggaacccc 517 ||||||||| Sbjct: 529 tggaacccc 537 Score = 50.1 bits (25), Expect = 0.009 Identities = 58/69 (84%) Strand = Plus / Plus Query: 355 ccacgacgagatcgacttcgagttcctgggcaacgagacgggccagccctacaccatcca 414 |||||||||||||||| | ||||||||||||| | | ||| ||||||||||| |||| Sbjct: 360 ccacgacgagatcgacatggagttcctgggcaccatccccggcgagccctacaccctcca 419 Query: 415 caccaacgt 423 |||||||| Sbjct: 420 gaccaacgt 428
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 81.8 bits (41), Expect = 3e-12 Identities = 62/69 (89%) Strand = Plus / Plus Query: 449 gagatgcagttctacccctggttcgaccccaccgccgacttccacaactacaccatcttc 508 ||||||| ||| ||| |||||||||||||||||||||||||||| ||||| ||||| || Sbjct: 17438384 gagatgcgcttccacctctggttcgaccccaccgccgacttccaccactacgccatcctc 17438443 Query: 509 tggaacccc 517 ||||||||| Sbjct: 17438444 tggaacccc 17438452 Score = 69.9 bits (35), Expect = 1e-08 Identities = 47/51 (92%) Strand = Plus / Plus Query: 467 tggttcgaccccaccgccgacttccacaactacaccatcttctggaacccc 517 ||||||||||||||||||||||||||| |||| ||||| ||||||||||| Sbjct: 20676569 tggttcgaccccaccgccgacttccactcctactccatcctctggaacccc 20676619 Score = 63.9 bits (32), Expect = 6e-07 Identities = 59/68 (86%) Strand = Plus / Plus Query: 358 cgacgagatcgacttcgagttcctgggcaacgagacgggccagccctacaccatccacac 417 ||||||| | ||||||||||||||||| ||| |||||| ||||||||| |||||| || Sbjct: 20676460 cgacgagctggacttcgagttcctggggaaccggacgggtgagccctacatcatccagac 20676519 Query: 418 caacgtgt 425 |||||||| Sbjct: 20676520 caacgtgt 20676527 Score = 50.1 bits (25), Expect = 0.009 Identities = 58/69 (84%) Strand = Plus / Plus Query: 355 ccacgacgagatcgacttcgagttcctgggcaacgagacgggccagccctacaccatcca 414 |||||||||||||||| | ||||||||||||| | | ||| ||||||||||| |||| Sbjct: 17438275 ccacgacgagatcgacatggagttcctgggcaccatccccggcgagccctacaccctcca 17438334 Query: 415 caccaacgt 423 |||||||| Sbjct: 17438335 gaccaacgt 17438343 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 604 gccgatgtacggcttctccagcatctgg 631 ||||||||||| ||||||||||||||| Sbjct: 20677099 gccgatgtacgtgttctccagcatctgg 20677126
>dbj|AP004299.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0434A03 Length = 146505 Score = 81.8 bits (41), Expect = 3e-12 Identities = 62/69 (89%) Strand = Plus / Plus Query: 449 gagatgcagttctacccctggttcgaccccaccgccgacttccacaactacaccatcttc 508 ||||||| ||| ||| |||||||||||||||||||||||||||| ||||| ||||| || Sbjct: 106608 gagatgcgcttccacctctggttcgaccccaccgccgacttccaccactacgccatcctc 106667 Query: 509 tggaacccc 517 ||||||||| Sbjct: 106668 tggaacccc 106676 Score = 50.1 bits (25), Expect = 0.009 Identities = 58/69 (84%) Strand = Plus / Plus Query: 355 ccacgacgagatcgacttcgagttcctgggcaacgagacgggccagccctacaccatcca 414 |||||||||||||||| | ||||||||||||| | | ||| ||||||||||| |||| Sbjct: 106499 ccacgacgagatcgacatggagttcctgggcaccatccccggcgagccctacaccctcca 106558 Query: 415 caccaacgt 423 |||||||| Sbjct: 106559 gaccaacgt 106567
>gb|BT017470.1| Zea mays clone EL01N0408C10.c mRNA sequence Length = 878 Score = 79.8 bits (40), Expect = 1e-11 Identities = 49/52 (94%) Strand = Plus / Plus Query: 466 ctggttcgaccccaccgccgacttccacaactacaccatcttctggaacccc 517 ||||||||||||||||||||||||||||| |||| ||||| ||||||||||| Sbjct: 264 ctggttcgaccccaccgccgacttccacacctacgccatcctctggaacccc 315 Score = 48.1 bits (24), Expect = 0.036 Identities = 57/68 (83%) Strand = Plus / Plus Query: 358 cgacgagatcgacttcgagttcctgggcaacgagacgggccagccctacaccatccacac 417 ||||||| | ||||||||||||||||||||| | || ||||||||| |||||| || Sbjct: 156 cgacgagctggacttcgagttcctgggcaaccgcagcggggagccctacatcatccagac 215 Query: 418 caacgtgt 425 |||||||| Sbjct: 216 caacgtgt 223
>emb|X93174.1|HVXETXEA H.vulgare mRNA for xyloglucan endotransglycosylase-like protein (XEA) Length = 1174 Score = 79.8 bits (40), Expect = 1e-11 Identities = 64/72 (88%) Strand = Plus / Plus Query: 356 cacgacgagatcgacttcgagttcctgggcaacgagacgggccagccctacaccatccac 415 ||||||||||||||||||||||||||||| |||| || ||| |||||||||| | ||| Sbjct: 331 cacgacgagatcgacttcgagttcctgggaaacgtcaccggcgagccctacacgctgcac 390 Query: 416 accaacgtgttc 427 |||||||||||| Sbjct: 391 accaacgtgttc 402 Score = 54.0 bits (27), Expect = 6e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 466 ctggttcgaccccaccgccgacttccacaactacaccatcttctggaaccc 516 ||||||||| |||||| ||||||||||| |||| ||||| |||||||||| Sbjct: 441 ctggttcgatcccaccaacgacttccacacctactccatcctctggaaccc 491
>gb|AY104207.1| Zea mays PCO111099 mRNA sequence Length = 1202 Score = 79.8 bits (40), Expect = 1e-11 Identities = 64/72 (88%) Strand = Plus / Plus Query: 356 cacgacgagatcgacttcgagttcctgggcaacgagacgggccagccctacaccatccac 415 |||||||||||||||| |||||||||||||||| |||||| |||||||||| | | || Sbjct: 363 cacgacgagatcgactccgagttcctgggcaaccggacggggcagccctacatcctgcag 422 Query: 416 accaacgtgttc 427 |||||||||||| Sbjct: 423 accaacgtgttc 434
>ref|XM_507172.1| PREDICTED Oryza sativa (japonica cultivar-group), P0682A06.17 mRNA Length = 1127 Score = 77.8 bits (39), Expect = 4e-11 Identities = 54/59 (91%) Strand = Plus / Plus Query: 455 cagttctacccctggttcgaccccaccgccgacttccacaactacaccatcttctggaa 513 |||||||||| ||||||||||||||||||||||||||||| ||||| ||| ||||||| Sbjct: 452 cagttctacctctggttcgaccccaccgccgacttccacacctacaagatcatctggaa 510 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 346 gggcgacgaccacgacgagatcgacttcgagttcctgggcaac 388 |||||||| |||||||||||||||| |||||||| |||||||| Sbjct: 343 gggcgacggccacgacgagatcgacatcgagttcatgggcaac 385 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 302 ggcaactccgccggcaccgtcac 324 ||||||||||||||||||||||| Sbjct: 296 ggcaactccgccggcaccgtcac 318
>ref|XM_480868.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1111 Score = 77.8 bits (39), Expect = 4e-11 Identities = 54/59 (91%) Strand = Plus / Plus Query: 455 cagttctacccctggttcgaccccaccgccgacttccacaactacaccatcttctggaa 513 |||||||||| ||||||||||||||||||||||||||||| ||||| ||| ||||||| Sbjct: 457 cagttctacctctggttcgaccccaccgccgacttccacacctacaagatcatctggaa 515 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 346 gggcgacgaccacgacgagatcgacttcgagttcctgggcaac 388 |||||||| |||||||||||||||| |||||||| |||||||| Sbjct: 348 gggcgacggccacgacgagatcgacatcgagttcatgggcaac 390 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 302 ggcaactccgccggcaccgtcac 324 ||||||||||||||||||||||| Sbjct: 301 ggcaactccgccggcaccgtcac 323
>dbj|AB110604.1| Oryza sativa (japonica cultivar-group) OsXRT5 mRNA for xyloglucan endotransglycosylase-related protein 5, complete cds Length = 1280 Score = 77.8 bits (39), Expect = 4e-11 Identities = 54/59 (91%) Strand = Plus / Plus Query: 455 cagttctacccctggttcgaccccaccgccgacttccacaactacaccatcttctggaa 513 |||||||||| ||||||||||||||||||||||||||||| ||||| ||| ||||||| Sbjct: 448 cagttctacctctggttcgaccccaccgccgacttccacacctacaagatcatctggaa 506 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 346 gggcgacgaccacgacgagatcgacttcgagttcctgggcaac 388 |||||||| |||||||||||||||| |||||||| |||||||| Sbjct: 339 gggcgacggccacgacgagatcgacatcgagttcatgggcaac 381 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 302 ggcaactccgccggcaccgtcac 324 ||||||||||||||||||||||| Sbjct: 292 ggcaactccgccggcaccgtcac 314
>dbj|AP005445.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0028E05 Length = 157631 Score = 77.8 bits (39), Expect = 4e-11 Identities = 48/51 (94%) Strand = Plus / Plus Query: 466 ctggttcgaccccaccgccgacttccacaactacaccatcttctggaaccc 516 ||||||||||||||||||||||||||||| |||| ||||| |||||||||| Sbjct: 62599 ctggttcgaccccaccgccgacttccacacctactccatcctctggaaccc 62649 Score = 73.8 bits (37), Expect = 6e-10 Identities = 64/73 (87%) Strand = Plus / Plus Query: 355 ccacgacgagatcgacttcgagttcctgggcaacgagacgggccagccctacaccatcca 414 |||||| ||||||||||||||||||||||| |||| ||| ||| |||| ||||| | || Sbjct: 57748 ccacgatgagatcgacttcgagttcctggggaacgtgaccggcgagccgtacacgctgca 57807 Query: 415 caccaacgtgttc 427 ||||||||||||| Sbjct: 57808 caccaacgtgttc 57820 Score = 67.9 bits (34), Expect = 4e-08 Identities = 61/70 (87%) Strand = Plus / Plus Query: 356 cacgacgagatcgacttcgagttcctgggcaacgagacgggccagccctacaccatccac 415 ||||||||||||||||||||||||||||| |||| || ||| |||| ||||| | ||| Sbjct: 69485 cacgacgagatcgacttcgagttcctggggaacgcgagcggcgagccgtacacggtgcac 69544 Query: 416 accaacgtgt 425 |||||||||| Sbjct: 69545 accaacgtgt 69554 Score = 58.0 bits (29), Expect = 4e-05 Identities = 59/69 (85%) Strand = Plus / Minus Query: 449 gagatgcagttctacccctggttcgaccccaccgccgacttccacaactacaccatcttc 508 |||||||||||| || ||||| |||||||||| |||||||||| |||| ||||| || Sbjct: 81434 gagatgcagttccgcctctggtacgaccccaccaaggacttccacacctactccatcctc 81375 Query: 509 tggaacccc 517 ||||||||| Sbjct: 81374 tggaacccc 81366 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Minus Query: 362 gagatcgacttcgagttcctgggcaacgagacgggccagccctacaccatccacaccaac 421 ||||||||||||||||||||||| || | ||| || |||| ||||| | ||||||||| Sbjct: 81521 gagatcgacttcgagttcctggggaatgtgaccggggagccgtacacgctgcacaccaac 81462 Query: 422 gtgttc 427 |||||| Sbjct: 81461 gtgttc 81456 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 356 cacgacgagatcgacttcgagttcctgggcaacg 389 ||||||||| | |||||||||||||||||||||| Sbjct: 62489 cacgacgaggtggacttcgagttcctgggcaacg 62522 Score = 48.1 bits (24), Expect = 0.036 Identities = 30/32 (93%) Strand = Plus / Minus Query: 302 ggcaactccgccggcaccgtcacaacctacta 333 ||||||||||||||||||||||| ||||||| Sbjct: 81656 ggcaactccgccggcaccgtcaccgcctacta 81625 Score = 48.1 bits (24), Expect = 0.036 Identities = 27/28 (96%) Strand = Plus / Plus Query: 302 ggcaactccgccggcaccgtcacaacct 329 ||||||||||||||||||||||| |||| Sbjct: 57561 ggcaactccgccggcaccgtcaccacct 57588 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 302 ggcaactccgccggcaccgtc 322 ||||||||||||||||||||| Sbjct: 69341 ggcaactccgccggcaccgtc 69361
>dbj|AP003771.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0622F03 Length = 170064 Score = 77.8 bits (39), Expect = 4e-11 Identities = 48/51 (94%) Strand = Plus / Plus Query: 466 ctggttcgaccccaccgccgacttccacaactacaccatcttctggaaccc 516 ||||||||||||||||||||||||||||| |||| ||||| |||||||||| Sbjct: 155390 ctggttcgaccccaccgccgacttccacacctactccatcctctggaaccc 155440 Score = 73.8 bits (37), Expect = 6e-10 Identities = 64/73 (87%) Strand = Plus / Plus Query: 355 ccacgacgagatcgacttcgagttcctgggcaacgagacgggccagccctacaccatcca 414 |||||| ||||||||||||||||||||||| |||| ||| ||| |||| ||||| | || Sbjct: 150539 ccacgatgagatcgacttcgagttcctggggaacgtgaccggcgagccgtacacgctgca 150598 Query: 415 caccaacgtgttc 427 ||||||||||||| Sbjct: 150599 caccaacgtgttc 150611 Score = 67.9 bits (34), Expect = 4e-08 Identities = 61/70 (87%) Strand = Plus / Plus Query: 356 cacgacgagatcgacttcgagttcctgggcaacgagacgggccagccctacaccatccac 415 ||||||||||||||||||||||||||||| |||| || ||| |||| ||||| | ||| Sbjct: 162276 cacgacgagatcgacttcgagttcctggggaacgcgagcggcgagccgtacacggtgcac 162335 Query: 416 accaacgtgt 425 |||||||||| Sbjct: 162336 accaacgtgt 162345 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 356 cacgacgagatcgacttcgagttcctgggcaacg 389 ||||||||| | |||||||||||||||||||||| Sbjct: 155280 cacgacgaggtggacttcgagttcctgggcaacg 155313 Score = 48.1 bits (24), Expect = 0.036 Identities = 27/28 (96%) Strand = Plus / Plus Query: 302 ggcaactccgccggcaccgtcacaacct 329 ||||||||||||||||||||||| |||| Sbjct: 150352 ggcaactccgccggcaccgtcaccacct 150379 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 302 ggcaactccgccggcaccgtc 322 ||||||||||||||||||||| Sbjct: 162132 ggcaactccgccggcaccgtc 162152
>dbj|AK104451.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-F05, full insert sequence Length = 1111 Score = 77.8 bits (39), Expect = 4e-11 Identities = 54/59 (91%) Strand = Plus / Plus Query: 455 cagttctacccctggttcgaccccaccgccgacttccacaactacaccatcttctggaa 513 |||||||||| ||||||||||||||||||||||||||||| ||||| ||| ||||||| Sbjct: 457 cagttctacctctggttcgaccccaccgccgacttccacacctacaagatcatctggaa 515 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 346 gggcgacgaccacgacgagatcgacttcgagttcctgggcaac 388 |||||||| |||||||||||||||| |||||||| |||||||| Sbjct: 348 gggcgacggccacgacgagatcgacatcgagttcatgggcaac 390 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 302 ggcaactccgccggcaccgtcac 324 ||||||||||||||||||||||| Sbjct: 301 ggcaactccgccggcaccgtcac 323
>dbj|AK060654.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-H12, full insert sequence Length = 1127 Score = 77.8 bits (39), Expect = 4e-11 Identities = 54/59 (91%) Strand = Plus / Plus Query: 455 cagttctacccctggttcgaccccaccgccgacttccacaactacaccatcttctggaa 513 |||||||||| ||||||||||||||||||||||||||||| ||||| ||| ||||||| Sbjct: 452 cagttctacctctggttcgaccccaccgccgacttccacacctacaagatcatctggaa 510 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 346 gggcgacgaccacgacgagatcgacttcgagttcctgggcaac 388 |||||||| |||||||||||||||| |||||||| |||||||| Sbjct: 343 gggcgacggccacgacgagatcgacatcgagttcatgggcaac 385 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 302 ggcaactccgccggcaccgtcac 324 ||||||||||||||||||||||| Sbjct: 296 ggcaactccgccggcaccgtcac 318
>emb|AJ875021.1| Zea mays mRNA for xyloglucan endo-transglycosylase/hydrolase (xth1 gene), cultivated variety W64A Length = 1225 Score = 75.8 bits (38), Expect = 2e-10 Identities = 56/62 (90%) Strand = Plus / Plus Query: 455 cagttctacccctggttcgaccccaccgccgacttccacaactacaccatcttctggaac 514 |||||| ||| ||||||||||||| ||||||||| ||||| |||||||||| |||||||| Sbjct: 496 cagttcgacctctggttcgacccctccgccgactaccacacctacaccatcatctggaac 555 Query: 515 cc 516 || Sbjct: 556 cc 557 Score = 46.1 bits (23), Expect = 0.14 Identities = 38/43 (88%) Strand = Plus / Plus Query: 347 ggcgacgaccacgacgagatcgacttcgagttcctgggcaacg 389 ||||||| ||||||||||||||| | |||||| ||||||||| Sbjct: 388 ggcgacgggcacgacgagatcgacatggagttcatgggcaacg 430 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 302 ggcaactccgccggcaccgtc 322 ||||||||||||||||||||| Sbjct: 340 ggcaactccgccggcaccgtc 360
>gb|AY107002.1| Zea mays PCO111646 mRNA sequence Length = 776 Score = 75.8 bits (38), Expect = 2e-10 Identities = 56/62 (90%) Strand = Plus / Plus Query: 455 cagttctacccctggttcgaccccaccgccgacttccacaactacaccatcttctggaac 514 |||||| ||| ||||||||||||| ||||||||| ||||| |||||||||| |||||||| Sbjct: 521 cagttcgacctctggttcgacccctccgccgactaccacacctacaccatcatctggaac 580 Query: 515 cc 516 || Sbjct: 581 cc 582 Score = 46.1 bits (23), Expect = 0.14 Identities = 38/43 (88%) Strand = Plus / Plus Query: 347 ggcgacgaccacgacgagatcgacttcgagttcctgggcaacg 389 ||||||| ||||||||||||||| | |||||| ||||||||| Sbjct: 413 ggcgacgggcacgacgagatcgacatggagttcatgggcaacg 455 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 302 ggcaactccgccggcaccgtc 322 ||||||||||||||||||||| Sbjct: 365 ggcaactccgccggcaccgtc 385
>gb|AY106744.1| Zea mays PCO111647 mRNA sequence Length = 1267 Score = 75.8 bits (38), Expect = 2e-10 Identities = 56/62 (90%) Strand = Plus / Plus Query: 455 cagttctacccctggttcgaccccaccgccgacttccacaactacaccatcttctggaac 514 |||||| ||| ||||||||||||| ||||||||| ||||| |||||||||| |||||||| Sbjct: 492 cagttcgacctctggttcgacccctccgccgactaccacacctacaccatcatctggaac 551 Query: 515 cc 516 || Sbjct: 552 cc 553
>ref|XM_468468.1| Oryza sativa (japonica cultivar-group), mRNA Length = 984 Score = 73.8 bits (37), Expect = 6e-10 Identities = 52/57 (91%) Strand = Plus / Plus Query: 456 agttctacccctggttcgaccccaccgccgacttccacaactacaccatcttctgga 512 ||||| ||| |||||||||||||||||||||||||||| ||||| ||||| |||||| Sbjct: 497 agttccacctctggttcgaccccaccgccgacttccaccactacgccatcctctgga 553
>ref|NM_197613.1| Oryza sativa (japonica cultivar-group) putative cellulase (OSJNBa0001O14.5), mRNA Length = 969 Score = 73.8 bits (37), Expect = 6e-10 Identities = 61/69 (88%) Strand = Plus / Plus Query: 449 gagatgcagttctacccctggttcgaccccaccgccgacttccacaactacaccatcttc 508 ||||||| ||| ||| |||||||||||||||||||| ||||||| ||||| ||||| || Sbjct: 526 gagatgcgcttccacctctggttcgaccccaccgccggcttccaccactacgccatcctc 585 Query: 509 tggaacccc 517 ||||||||| Sbjct: 586 tggaacccc 594
>gb|AC025783.10| Oryza sativa chromosome 10 BAC OSJNBa0001O14 genomic sequence, complete sequence Length = 178022 Score = 73.8 bits (37), Expect = 6e-10 Identities = 61/69 (88%) Strand = Plus / Plus Query: 449 gagatgcagttctacccctggttcgaccccaccgccgacttccacaactacaccatcttc 508 ||||||| ||| ||| |||||||||||||||||||| ||||||| ||||| ||||| || Sbjct: 64137 gagatgcgcttccacctctggttcgaccccaccgccggcttccaccactacgccatcctc 64196 Query: 509 tggaacccc 517 ||||||||| Sbjct: 64197 tggaacccc 64205
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 73.8 bits (37), Expect = 6e-10 Identities = 61/69 (88%) Strand = Plus / Plus Query: 449 gagatgcagttctacccctggttcgaccccaccgccgacttccacaactacaccatcttc 508 ||||||| ||| ||| |||||||||||||||||||| ||||||| ||||| ||||| || Sbjct: 20801738 gagatgcgcttccacctctggttcgaccccaccgccggcttccaccactacgccatcctc 20801797 Query: 509 tggaacccc 517 ||||||||| Sbjct: 20801798 tggaacccc 20801806 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 348 gcgacgaccacgacgagatc 367 |||||||||||||||||||| Sbjct: 19319742 gcgacgaccacgacgagatc 19319761 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 348 gcgacgaccacgacgagatc 367 |||||||||||||||||||| Sbjct: 19313026 gcgacgaccacgacgagatc 19313045 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 348 gcgacgaccacgacgagatc 367 |||||||||||||||||||| Sbjct: 19308718 gcgacgaccacgacgagatc 19308737 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 122 ctcgtcggcgccaacttcgc 141 |||||||||||||||||||| Sbjct: 16557105 ctcgtcggcgccaacttcgc 16557124
>dbj|AP003989.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1063_D06 Length = 102439 Score = 73.8 bits (37), Expect = 6e-10 Identities = 52/57 (91%) Strand = Plus / Minus Query: 456 agttctacccctggttcgaccccaccgccgacttccacaactacaccatcttctgga 512 ||||| ||| |||||||||||||||||||||||||||| ||||| ||||| |||||| Sbjct: 8275 agttccacctctggttcgaccccaccgccgacttccaccactacgccatcctctgga 8219
>dbj|AP004026.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1136_C04 Length = 103194 Score = 73.8 bits (37), Expect = 6e-10 Identities = 52/57 (91%) Strand = Plus / Minus Query: 456 agttctacccctggttcgaccccaccgccgacttccacaactacaccatcttctgga 512 ||||| ||| |||||||||||||||||||||||||||| ||||| ||||| |||||| Sbjct: 57302 agttccacctctggttcgaccccaccgccgacttccaccactacgccatcctctgga 57246
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 73.8 bits (37), Expect = 6e-10 Identities = 61/69 (88%) Strand = Plus / Plus Query: 449 gagatgcagttctacccctggttcgaccccaccgccgacttccacaactacaccatcttc 508 ||||||| ||| ||| |||||||||||||||||||| ||||||| ||||| ||||| || Sbjct: 20813002 gagatgcgcttccacctctggttcgaccccaccgccggcttccaccactacgccatcctc 20813061 Query: 509 tggaacccc 517 ||||||||| Sbjct: 20813062 tggaacccc 20813070 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 348 gcgacgaccacgacgagatc 367 |||||||||||||||||||| Sbjct: 19331018 gcgacgaccacgacgagatc 19331037 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 348 gcgacgaccacgacgagatc 367 |||||||||||||||||||| Sbjct: 19324302 gcgacgaccacgacgagatc 19324321 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 348 gcgacgaccacgacgagatc 367 |||||||||||||||||||| Sbjct: 19319994 gcgacgaccacgacgagatc 19320013 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 122 ctcgtcggcgccaacttcgc 141 |||||||||||||||||||| Sbjct: 16565346 ctcgtcggcgccaacttcgc 16565365
>gb|BT017380.1| Zea mays clone EL01N0326D06.c mRNA sequence Length = 781 Score = 71.9 bits (36), Expect = 2e-09 Identities = 54/60 (90%) Strand = Plus / Plus Query: 455 cagttctacccctggttcgaccccaccgccgacttccacaactacaccatcttctggaac 514 |||||||||| ||||||||||| ||||||||||||||| |||||||||| |||||||| Sbjct: 57 cagttctacctgtggttcgacccggccgccgacttccacacctacaccatcatctggaac 116
>gb|AY106262.1| Zea mays PCO111648 mRNA sequence Length = 1257 Score = 71.9 bits (36), Expect = 2e-09 Identities = 54/60 (90%) Strand = Plus / Plus Query: 455 cagttctacccctggttcgaccccaccgccgacttccacaactacaccatcttctggaac 514 |||||||||| ||||||||||| ||||||||||||||| |||||||||| |||||||| Sbjct: 535 cagttctacctgtggttcgacccggccgccgacttccacacctacaccatcatctggaac 594 Score = 44.1 bits (22), Expect = 0.56 Identities = 31/34 (91%) Strand = Plus / Plus Query: 356 cacgacgagatcgacttcgagttcctgggcaacg 389 ||||||||||||||| | |||||| ||||||||| Sbjct: 436 cacgacgagatcgacatggagttcatgggcaacg 469
>ref|XM_478514.1| Oryza sativa (japonica cultivar-group), mRNA Length = 930 Score = 69.9 bits (35), Expect = 1e-08 Identities = 47/51 (92%) Strand = Plus / Plus Query: 467 tggttcgaccccaccgccgacttccacaactacaccatcttctggaacccc 517 ||||||||||||||||||||||||||| |||| ||||| ||||||||||| Sbjct: 454 tggttcgaccccaccgccgacttccactcctactccatcctctggaacccc 504 Score = 63.9 bits (32), Expect = 6e-07 Identities = 59/68 (86%) Strand = Plus / Plus Query: 358 cgacgagatcgacttcgagttcctgggcaacgagacgggccagccctacaccatccacac 417 ||||||| | ||||||||||||||||| ||| |||||| ||||||||| |||||| || Sbjct: 345 cgacgagctggacttcgagttcctggggaaccggacgggtgagccctacatcatccagac 404 Query: 418 caacgtgt 425 |||||||| Sbjct: 405 caacgtgt 412 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 604 gccgatgtacggcttctccagcatctgg 631 ||||||||||| ||||||||||||||| Sbjct: 591 gccgatgtacgtgttctccagcatctgg 618
>ref|XM_478515.1| Oryza sativa (japonica cultivar-group), mRNA Length = 657 Score = 69.9 bits (35), Expect = 1e-08 Identities = 47/51 (92%) Strand = Plus / Plus Query: 467 tggttcgaccccaccgccgacttccacaactacaccatcttctggaacccc 517 ||||||||||||||||||||||||||| |||| ||||| ||||||||||| Sbjct: 546 tggttcgaccccaccgccgacttccactcctactccatcctctggaacccc 596 Score = 63.9 bits (32), Expect = 6e-07 Identities = 59/68 (86%) Strand = Plus / Plus Query: 358 cgacgagatcgacttcgagttcctgggcaacgagacgggccagccctacaccatccacac 417 ||||||| | ||||||||||||||||| ||| |||||| ||||||||| |||||| || Sbjct: 437 cgacgagctggacttcgagttcctggggaaccggacgggtgagccctacatcatccagac 496 Query: 418 caacgtgt 425 |||||||| Sbjct: 497 caacgtgt 504
>ref|XM_473788.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 822 Score = 69.9 bits (35), Expect = 1e-08 Identities = 53/59 (89%) Strand = Plus / Plus Query: 454 gcagttctacccctggttcgaccccaccgccgacttccacaactacaccatcttctgga 512 ||||||| ||| |||||||||||||||| |||||||||||| |||| ||||| |||||| Sbjct: 390 gcagttccacctctggttcgaccccaccaccgacttccacacctactccatcgtctgga 448
>emb|AL606638.2|OSJN00077 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0041A02, complete sequence Length = 166804 Score = 69.9 bits (35), Expect = 1e-08 Identities = 53/59 (89%) Strand = Plus / Minus Query: 454 gcagttctacccctggttcgaccccaccgccgacttccacaactacaccatcttctgga 512 ||||||| ||| |||||||||||||||| |||||||||||| |||| ||||| |||||| Sbjct: 150303 gcagttccacctctggttcgaccccaccaccgacttccacacctactccatcgtctgga 150245 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 355 ccacgacgagatcgacttcgagttcctgggcaacg 389 |||||||||||||||| | |||||||||||||||| Sbjct: 141798 ccacgacgagatcgacctggagttcctgggcaacg 141764
>gb|AF443603.1|AF443603 Oryza sativa xyloglucan endotransglycosylase mRNA, complete cds Length = 1162 Score = 69.9 bits (35), Expect = 1e-08 Identities = 53/59 (89%) Strand = Plus / Plus Query: 454 gcagttctacccctggttcgaccccaccgccgacttccacaactacaccatcttctgga 512 ||||||| ||| |||||||||||||||| |||||||||||| |||| ||||| |||||| Sbjct: 462 gcagttccacctctggttcgaccccaccaccgacttccacacctactccatcgtctgga 520
>gb|AY589588.1| Triticum aestivum endotransglucosylase/hydrolase XTH4 mRNA, complete cds Length = 1100 Score = 69.9 bits (35), Expect = 1e-08 Identities = 56/63 (88%) Strand = Plus / Plus Query: 455 cagttctacccctggttcgaccccaccgccgacttccacaactacaccatcttctggaac 514 |||||||||| ||||||||||||| ||||||||||||||| ||||| ||| ||||||| Sbjct: 449 cagttctacctctggttcgacccctccgccgacttccacacctacaagatcacctggaac 508 Query: 515 ccc 517 ||| Sbjct: 509 ccc 511 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 355 ccacgacgagatcgacttcgagttcctgggcaac 388 |||||||||||||||| |||||||| |||||||| Sbjct: 349 ccacgacgagatcgacatcgagttcatgggcaac 382
>dbj|AP004674.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0681F05 Length = 144741 Score = 69.9 bits (35), Expect = 1e-08 Identities = 47/51 (92%) Strand = Plus / Plus Query: 467 tggttcgaccccaccgccgacttccacaactacaccatcttctggaacccc 517 ||||||||||||||||||||||||||| |||| ||||| ||||||||||| Sbjct: 29319 tggttcgaccccaccgccgacttccactcctactccatcctctggaacccc 29369 Score = 63.9 bits (32), Expect = 6e-07 Identities = 59/68 (86%) Strand = Plus / Plus Query: 358 cgacgagatcgacttcgagttcctgggcaacgagacgggccagccctacaccatccacac 417 ||||||| | ||||||||||||||||| ||| |||||| ||||||||| |||||| || Sbjct: 29210 cgacgagctggacttcgagttcctggggaaccggacgggtgagccctacatcatccagac 29269 Query: 418 caacgtgt 425 |||||||| Sbjct: 29270 caacgtgt 29277 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 604 gccgatgtacggcttctccagcatctgg 631 ||||||||||| ||||||||||||||| Sbjct: 29849 gccgatgtacgtgttctccagcatctgg 29876
>dbj|AK111340.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-181-F07, full insert sequence Length = 658 Score = 69.9 bits (35), Expect = 1e-08 Identities = 47/51 (92%) Strand = Plus / Plus Query: 467 tggttcgaccccaccgccgacttccacaactacaccatcttctggaacccc 517 ||||||||||||||||||||||||||| |||| ||||| ||||||||||| Sbjct: 546 tggttcgaccccaccgccgacttccactcctactccatcctctggaacccc 596 Score = 63.9 bits (32), Expect = 6e-07 Identities = 59/68 (86%) Strand = Plus / Plus Query: 358 cgacgagatcgacttcgagttcctgggcaacgagacgggccagccctacaccatccacac 417 ||||||| | ||||||||||||||||| ||| |||||| ||||||||| |||||| || Sbjct: 437 cgacgagctggacttcgagttcctggggaaccggacgggtgagccctacatcatccagac 496 Query: 418 caacgtgt 425 |||||||| Sbjct: 497 caacgtgt 504
>dbj|AK073731.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033064P12, full insert sequence Length = 1707 Score = 69.9 bits (35), Expect = 1e-08 Identities = 47/51 (92%) Strand = Plus / Plus Query: 467 tggttcgaccccaccgccgacttccacaactacaccatcttctggaacccc 517 ||||||||||||||||||||||||||| |||| ||||| ||||||||||| Sbjct: 640 tggttcgaccccaccgccgacttccactcctactccatcctctggaacccc 690 Score = 63.9 bits (32), Expect = 6e-07 Identities = 59/68 (86%) Strand = Plus / Plus Query: 358 cgacgagatcgacttcgagttcctgggcaacgagacgggccagccctacaccatccacac 417 ||||||| | ||||||||||||||||| ||| |||||| ||||||||| |||||| || Sbjct: 531 cgacgagctggacttcgagttcctggggaaccggacgggtgagccctacatcatccagac 590 Query: 418 caacgtgt 425 |||||||| Sbjct: 591 caacgtgt 598 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 604 gccgatgtacggcttctccagcatctgg 631 ||||||||||| ||||||||||||||| Sbjct: 1170 gccgatgtacgtgttctccagcatctgg 1197
>dbj|AK070734.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023062B10, full insert sequence Length = 1109 Score = 69.9 bits (35), Expect = 1e-08 Identities = 53/59 (89%) Strand = Plus / Plus Query: 454 gcagttctacccctggttcgaccccaccgccgacttccacaactacaccatcttctgga 512 ||||||| ||| |||||||||||||||| |||||||||||| |||| ||||| |||||| Sbjct: 480 gcagttccacctctggttcgaccccaccaccgacttccacacctactccatcgtctgga 538
>emb|X91660.1|HVPM2GENE H.vulgare mRNA for xyloglucan endotransglycosylase-like protein Length = 1110 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 455 cagttctacccctggttcgaccccaccgccgacttccacaactaca 500 |||||||||| ||||||||||||| ||||||||||||||| ||||| Sbjct: 440 cagttctacctctggttcgacccctccgccgacttccacacctaca 485 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 355 ccacgacgagatcgacttcgagttcctgggcaac 388 |||||||||||||||| |||||||| |||||||| Sbjct: 340 ccacgacgagatcgacatcgagttcatgggcaac 373 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 302 ggcaactccgccggcaccgtcac 324 ||||||||||||||||||||||| Sbjct: 284 ggcaactccgccggcaccgtcac 306
>dbj|AK105934.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-B05, full insert sequence Length = 1101 Score = 67.9 bits (34), Expect = 4e-08 Identities = 61/70 (87%) Strand = Plus / Plus Query: 356 cacgacgagatcgacttcgagttcctgggcaacgagacgggccagccctacaccatccac 415 ||||||||||||||||||||||||||||| |||| || ||| |||| ||||| | ||| Sbjct: 386 cacgacgagatcgacttcgagttcctggggaacgcgagcggcgagccgtacacggtgcac 445 Query: 416 accaacgtgt 425 |||||||||| Sbjct: 446 accaacgtgt 455
>dbj|AB196977.1| Sagittaria pygmaea SpXTH4 mRNA for xyloglucan endotransglucosylase/hydrolase, complete cds Length = 1181 Score = 65.9 bits (33), Expect = 2e-07 Identities = 60/69 (86%) Strand = Plus / Plus Query: 355 ccacgacgagatcgacttcgagttcctgggcaacgagacgggccagccctacaccatcca 414 |||||||||||||||||| |||||||| || |||| | ||||||||||||||| | || Sbjct: 534 ccacgacgagatcgactttgagttcctcgggaacgtctccggccagccctacaccctgca 593 Query: 415 caccaacgt 423 ||||||||| Sbjct: 594 caccaacgt 602
>dbj|AB196975.1| Sagittaria pygmaea SpXTH2 mRNA for xyloglucan endotransglucosylase/hydrolase, partial cds Length = 708 Score = 65.9 bits (33), Expect = 2e-07 Identities = 33/33 (100%) Strand = Plus / Plus Query: 356 cacgacgagatcgacttcgagttcctgggcaac 388 ||||||||||||||||||||||||||||||||| Sbjct: 74 cacgacgagatcgacttcgagttcctgggcaac 106
>dbj|AB196976.1| Sagittaria pygmaea SpXTH3 mRNA for xyloglucan endotransglucosylase/hydrolase, complete cds Length = 1273 Score = 63.9 bits (32), Expect = 6e-07 Identities = 59/68 (86%) Strand = Plus / Plus Query: 354 accacgacgagatcgacttcgagttcctgggcaacgagacgggccagccctacaccatcc 413 |||||||||||||||||||||||||||| || ||| | |||||||| |||||||||| Sbjct: 447 accacgacgagatcgacttcgagttcctagggaacacatccggccagccatacaccatcc 506 Query: 414 acaccaac 421 || ||||| Sbjct: 507 acgccaac 514
>dbj|D16457.1|WHTEXT4 Wheat mRNA for endo-xyloglucan transferase, complete cds Length = 1088 Score = 63.9 bits (32), Expect = 6e-07 Identities = 62/72 (86%) Strand = Plus / Plus Query: 356 cacgacgagatcgacttcgagttcctgggcaacgagacgggccagccctacaccatccac 415 |||||||||||||||||||||||| |||| ||| |||||| ||||| |||| | | || Sbjct: 353 cacgacgagatcgacttcgagttcttggggaacaggacggggcagccgtacatcctgcag 412 Query: 416 accaacgtgttc 427 |||||||||||| Sbjct: 413 accaacgtgttc 424
>emb|AL606650.5|OSJN00097 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0015D13, complete sequence Length = 127135 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 467 tggttcgaccccaccgccgacttccacaactacaccatcttctggaacccc 517 |||||||||||||||||||||||||||| |||| || | ||||||||||| Sbjct: 76221 tggttcgaccccaccgccgacttccacacctacgccgtgctctggaacccc 76271 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 360 acgagatcgacttcgagttcctgggcaacg 389 ||||| |||||||||||||||||||||||| Sbjct: 76114 acgagttcgacttcgagttcctgggcaacg 76143
>dbj|AK120345.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013063H05, full insert sequence Length = 566 Score = 61.9 bits (31), Expect = 2e-06 Identities = 105/127 (82%), Gaps = 2/127 (1%) Strand = Plus / Plus Query: 302 ggcaactccgccggcaccgtcacaacctactatacgtcgtcggtgggcgacgac-cacga 360 ||||||||||||||||||||||| ||||||| ||||||| ||| | |||| || || Sbjct: 351 ggcaactccgccggcaccgtcaccgcctactacttgtcgtcgcaggg-gccgacgcatga 409 Query: 361 cgagatcgacttcgagttcctgggcaacgagacgggccagccctacaccatccacaccaa 420 ||||||||||||||||||||||| || | ||| || |||| ||||| | |||||||| Sbjct: 410 tgagatcgacttcgagttcctggggaatgtgaccggggagccgtacacgctgcacaccaa 469 Query: 421 cgtgttc 427 ||||||| Sbjct: 470 cgtgttc 476 Score = 58.0 bits (29), Expect = 4e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 449 gagatgcagttctacccctggttcgaccccaccgccgacttccacaactacaccatcttc 508 |||||||||||| || ||||| |||||||||| |||||||||| |||| ||||| || Sbjct: 498 gagatgcagttccgcctctggtacgaccccaccaaggacttccacacctactccatcctc 557 Query: 509 tggaacccc 517 ||||||||| Sbjct: 558 tggaacccc 566
>dbj|AK105513.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-127-F01, full insert sequence Length = 1253 Score = 61.9 bits (31), Expect = 2e-06 Identities = 105/127 (82%), Gaps = 2/127 (1%) Strand = Plus / Plus Query: 302 ggcaactccgccggcaccgtcacaacctactatacgtcgtcggtgggcgacgac-cacga 360 ||||||||||||||||||||||| ||||||| ||||||| ||| | |||| || || Sbjct: 341 ggcaactccgccggcaccgtcaccgcctactacttgtcgtcgcaggg-gccgacgcatga 399 Query: 361 cgagatcgacttcgagttcctgggcaacgagacgggccagccctacaccatccacaccaa 420 ||||||||||||||||||||||| || | ||| || |||| ||||| | |||||||| Sbjct: 400 tgagatcgacttcgagttcctggggaatgtgaccggggagccgtacacgctgcacaccaa 459 Query: 421 cgtgttc 427 ||||||| Sbjct: 460 cgtgttc 466 Score = 58.0 bits (29), Expect = 4e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 449 gagatgcagttctacccctggttcgaccccaccgccgacttccacaactacaccatcttc 508 |||||||||||| || ||||| |||||||||| |||||||||| |||| ||||| || Sbjct: 488 gagatgcagttccgcctctggtacgaccccaccaaggacttccacacctactccatcctc 547 Query: 509 tggaacccc 517 ||||||||| Sbjct: 548 tggaacccc 556
>dbj|AK099331.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033024P08, full insert sequence Length = 1199 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 467 tggttcgaccccaccgccgacttccacaactacaccatcttctggaacccc 517 |||||||||||||||||||||||||||| |||| || | ||||||||||| Sbjct: 443 tggttcgaccccaccgccgacttccacacctacgccgtgctctggaacccc 493 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 360 acgagatcgacttcgagttcctgggcaacg 389 ||||| |||||||||||||||||||||||| Sbjct: 336 acgagttcgacttcgagttcctgggcaacg 365
>dbj|AK059277.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-025-C07, full insert sequence Length = 1279 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 467 tggttcgaccccaccgccgacttccacaactacaccatcttctggaacccc 517 |||||||||||||||||||||||||||| |||| || | ||||||||||| Sbjct: 447 tggttcgaccccaccgccgacttccacacctacgccgtgctctggaacccc 497 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 360 acgagatcgacttcgagttcctgggcaacg 389 ||||| |||||||||||||||||||||||| Sbjct: 340 acgagttcgacttcgagttcctgggcaacg 369
>emb|AL732336.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0105C05, complete sequence Length = 62215 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 467 tggttcgaccccaccgccgacttccacaactacaccatcttctggaacccc 517 |||||||||||||||||||||||||||| |||| || | ||||||||||| Sbjct: 31708 tggttcgaccccaccgccgacttccacacctacgccgtgctctggaacccc 31758 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 360 acgagatcgacttcgagttcctgggcaacg 389 ||||| |||||||||||||||||||||||| Sbjct: 31601 acgagttcgacttcgagttcctgggcaacg 31630
>gb|AY105365.1| Zea mays PCO092487 mRNA sequence Length = 1253 Score = 60.0 bits (30), Expect = 9e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 356 cacgacgagatcgacttcgagttcctgggcaacg 389 ||||||||||||||||||||||||||||| |||| Sbjct: 399 cacgacgagatcgacttcgagttcctggggaacg 432
>gb|U15964.1|ZMU15964 Zea mays xyloglucan endo-transglycosylase homolog gene, complete cds Length = 1827 Score = 60.0 bits (30), Expect = 9e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 356 cacgacgagatcgacttcgagttcctgggcaacg 389 ||||||||||||||||||||||||||||| |||| Sbjct: 414 cacgacgagatcgacttcgagttcctggggaacg 447
>gb|U15781.1|ZMU15781 Zea mays xyloglucan endo-transglycosylase homolog mRNA, complete cds Length = 1221 Score = 60.0 bits (30), Expect = 9e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 356 cacgacgagatcgacttcgagttcctgggcaacg 389 ||||||||||||||||||||||||||||| |||| Sbjct: 406 cacgacgagatcgacttcgagttcctggggaacg 439
>gb|AC134925.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0041J17, complete sequence Length = 148829 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 356 cacgacgagatcgacttcgagttcctggg 384 ||||||||||||||||||||||||||||| Sbjct: 113474 cacgacgagatcgacttcgagttcctggg 113502 Score = 42.1 bits (21), Expect = 2.2 Identities = 57/69 (82%) Strand = Plus / Plus Query: 459 tctacccctggttcgaccccaccgccgacttccacaactacaccatcttctggaacccct 518 |||||| |||||||||||||||| |||| |||| |||| || || ||||||||| || Sbjct: 113577 tctacctctggttcgaccccaccaaggactaccactcctactccgtcctctggaacctct 113636 Query: 519 ccatgatcg 527 |||||||| Sbjct: 113637 acatgatcg 113645
>gb|AC136481.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0007D07, complete sequence Length = 133930 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 356 cacgacgagatcgacttcgagttcctggg 384 ||||||||||||||||||||||||||||| Sbjct: 13093 cacgacgagatcgacttcgagttcctggg 13121 Score = 42.1 bits (21), Expect = 2.2 Identities = 57/69 (82%) Strand = Plus / Plus Query: 459 tctacccctggttcgaccccaccgccgacttccacaactacaccatcttctggaacccct 518 |||||| |||||||||||||||| |||| |||| |||| || || ||||||||| || Sbjct: 13196 tctacctctggttcgaccccaccaaggactaccactcctactccgtcctctggaacctct 13255 Query: 519 ccatgatcg 527 |||||||| Sbjct: 13256 acatgatcg 13264
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 356 cacgacgagatcgacttcgagttcctggg 384 ||||||||||||||||||||||||||||| Sbjct: 19010276 cacgacgagatcgacttcgagttcctggg 19010304 Score = 42.1 bits (21), Expect = 2.2 Identities = 57/69 (82%) Strand = Plus / Plus Query: 459 tctacccctggttcgaccccaccgccgacttccacaactacaccatcttctggaacccct 518 |||||| |||||||||||||||| |||| |||| |||| || || ||||||||| || Sbjct: 19010379 tctacctctggttcgaccccaccaaggactaccactcctactccgtcctctggaacctct 19010438 Query: 519 ccatgatcg 527 |||||||| Sbjct: 19010439 acatgatcg 19010447
>dbj|AB196974.1| Sagittaria pygmaea SpXTH1 mRNA for xyloglucan endotransglucosylase/hydrolase, complete cds Length = 1101 Score = 58.0 bits (29), Expect = 4e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 356 cacgacgagatcgacttcgagttcctgggcaac 388 |||||||||||||||||||||||||| |||||| Sbjct: 446 cacgacgagatcgacttcgagttccttggcaac 478
>dbj|AP004995.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0068B06 Length = 143712 Score = 58.0 bits (29), Expect = 4e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 466 ctggttcgaccccaccgccgacttccacaactacaccatcttctggaacccct 518 ||||||||||||| | ||||||||||| ||||| ||||| |||||||||||| Sbjct: 33526 ctggttcgaccccgctgccgacttccatgactactccatcctctggaacccct 33474
>dbj|AK071574.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023105D14, full insert sequence Length = 977 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 356 cacgacgagatcgacttcgagttcctggg 384 ||||||||||||||||||||||||||||| Sbjct: 343 cacgacgagatcgacttcgagttcctggg 371 Score = 46.1 bits (23), Expect = 0.14 Identities = 68/83 (81%) Strand = Plus / Plus Query: 459 tctacccctggttcgaccccaccgccgacttccacaactacaccatcttctggaacccct 518 |||||| |||||||||||||||| |||| |||| |||| || || ||||||||| || Sbjct: 446 tctacctctggttcgaccccaccaaggactaccactcctactccgtcctctggaacctct 505 Query: 519 ccatgatcgtgtggttcgtggac 541 |||||||| || ||||||||| Sbjct: 506 acatgatcgcgttcttcgtggac 528
>dbj|AK061093.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-207-A02, full insert sequence Length = 1053 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 356 cacgacgagatcgacttcgagttcctggg 384 ||||||||||||||||||||||||||||| Sbjct: 340 cacgacgagatcgacttcgagttcctggg 368 Score = 46.1 bits (23), Expect = 0.14 Identities = 68/83 (81%) Strand = Plus / Plus Query: 459 tctacccctggttcgaccccaccgccgacttccacaactacaccatcttctggaacccct 518 |||||| |||||||||||||||| |||| |||| |||| || || ||||||||| || Sbjct: 443 tctacctctggttcgaccccaccaaggactaccactcctactccgtcctctggaacctct 502 Query: 519 ccatgatcgtgtggttcgtggac 541 |||||||| || ||||||||| Sbjct: 503 acatgatcgcgttcttcgtggac 525
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 356 cacgacgagatcgacttcgagttcctggg 384 ||||||||||||||||||||||||||||| Sbjct: 19168925 cacgacgagatcgacttcgagttcctggg 19168953 Score = 42.1 bits (21), Expect = 2.2 Identities = 57/69 (82%) Strand = Plus / Plus Query: 459 tctacccctggttcgaccccaccgccgacttccacaactacaccatcttctggaacccct 518 |||||| |||||||||||||||| |||| |||| |||| || || ||||||||| || Sbjct: 19169028 tctacctctggttcgaccccaccaaggactaccactcctactccgtcctctggaacctct 19169087 Query: 519 ccatgatcg 527 |||||||| Sbjct: 19169088 acatgatcg 19169096
>gb|BT017812.1| Zea mays clone EL01N0507B07.c mRNA sequence Length = 1156 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Plus Query: 455 cagttctacccctggttcgaccccaccgccgacttccacaactacaccatcttctggaac 514 |||||||||| ||||||||||| |||||||||||||||| |||| ||| |||||||| Sbjct: 352 cagttctacctgtggttcgacccggccgccgacttccacaaatacaagatcgtctggaac 411 Score = 54.0 bits (27), Expect = 6e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 346 gggcgacgaccacgacgagatcgacttcgagttcctgggcaac 388 ||||||||| ||||||||||||||| | |||||| |||||||| Sbjct: 243 gggcgacgagcacgacgagatcgacatggagttcatgggcaac 285
>emb|X91659.1|HVEXTGENE H.vulgare mRNA for endoxyloglucan transferase Length = 1175 Score = 56.0 bits (28), Expect = 1e-04 Identities = 46/52 (88%) Strand = Plus / Plus Query: 356 cacgacgagatcgacttcgagttcctgggcaacgagacgggccagccctaca 407 |||||||||||||||||||||||| |||| ||| |||||| ||||| |||| Sbjct: 392 cacgacgagatcgacttcgagttcttggggaacaggacggggcagccgtaca 443
>gb|AY105107.1| Zea mays PCO140468 mRNA sequence Length = 1297 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Plus Query: 455 cagttctacccctggttcgaccccaccgccgacttccacaactacaccatcttctggaac 514 |||||||||| ||||||||||| |||||||||||||||| |||| ||| |||||||| Sbjct: 516 cagttctacctgtggttcgacccggccgccgacttccacaaatacaagatcgtctggaac 575
>ref|XM_473787.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 882 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 355 ccacgacgagatcgacttcgagttcctgggcaacg 389 |||||||||||||||| | |||||||||||||||| Sbjct: 315 ccacgacgagatcgacctggagttcctgggcaacg 349
>dbj|AK063614.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-118-D08, full insert sequence Length = 1041 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 355 ccacgacgagatcgacttcgagttcctgggcaacg 389 |||||||||||||||| | |||||||||||||||| Sbjct: 378 ccacgacgagatcgacctggagttcctgggcaacg 412
>gb|AY103552.1| Zea mays PCO075057 mRNA sequence Length = 1380 Score = 54.0 bits (27), Expect = 6e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 360 acgagatcgacttcgagttcctgggcaacgagacgggccagcc 402 ||||| |||||||||||||||||||||||| ||| ||| |||| Sbjct: 395 acgagttcgacttcgagttcctgggcaacgtgaccggcgagcc 437 Score = 48.1 bits (24), Expect = 0.036 Identities = 27/28 (96%) Strand = Plus / Plus Query: 467 tggttcgaccccaccgccgacttccaca 494 |||||||||||||| ||||||||||||| Sbjct: 502 tggttcgaccccacggccgacttccaca 529
>ref|NM_119029.2| Arabidopsis thaliana hydrolase, acting on glycosyl bonds / hydrolase, hydrolyzing O-glycosyl compounds AT4G28850 mRNA, complete cds Length = 1096 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Plus Query: 356 cacgacgagatcgacttcgagttcctgggcaacgagacgggccagccctacaccatccac 415 ||||| ||||| |||||||||||||| || || | ||| || ||||| ||||| |||||| Sbjct: 336 cacgatgagatagacttcgagttcctaggaaatgcgactggtcagccgtacacgatccac 395 Query: 416 accaac 421 |||||| Sbjct: 396 accaac 401
>emb|AL161573.2|ATCHRIV69 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 69 Length = 197655 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Plus Query: 356 cacgacgagatcgacttcgagttcctgggcaacgagacgggccagccctacaccatccac 415 ||||| ||||| |||||||||||||| || || | ||| || ||||| ||||| |||||| Sbjct: 165611 cacgatgagatagacttcgagttcctaggaaatgcgactggtcagccgtacacgatccac 165670 Query: 416 accaac 421 |||||| Sbjct: 165671 accaac 165676
>emb|AL035353.1|ATF16A16 Arabidopsis thaliana DNA chromosome 4, BAC clone F16A16 (ESSAII project) Length = 97155 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Minus Query: 356 cacgacgagatcgacttcgagttcctgggcaacgagacgggccagccctacaccatccac 415 ||||| ||||| |||||||||||||| || || | ||| || ||||| ||||| |||||| Sbjct: 11456 cacgatgagatagacttcgagttcctaggaaatgcgactggtcagccgtacacgatccac 11397 Query: 416 accaac 421 |||||| Sbjct: 11396 accaac 11391
>dbj|AB196978.1| Sagittaria pygmaea SpXTH5 mRNA for xyloglucan endotransglucosylase/hydrolase, complete cds Length = 1029 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 356 cacgacgagatcgacttcgagttcctgggcaacg 389 ||||||||||||||||| |||||||| ||||||| Sbjct: 392 cacgacgagatcgactttgagttccttggcaacg 425 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Plus Query: 305 aactccgccggcaccgtcacaacctacta 333 ||||||||||||||||||||| ||||||| Sbjct: 341 aactccgccggcaccgtcacagcctacta 369
>emb|BX828048.1|CNS0A30B Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH48ZE01 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1097 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Plus Query: 356 cacgacgagatcgacttcgagttcctgggcaacgagacgggccagccctacaccatccac 415 ||||| ||||| |||||||||||||| || || | ||| || ||||| ||||| |||||| Sbjct: 336 cacgatgagatagacttcgagttcctaggaaatgcgactggtcagccgtacacgatccac 395 Query: 416 accaac 421 |||||| Sbjct: 396 accaac 401
>ref|XM_463978.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1560 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 356 cacgacgagatcgacttcgagttcctgggcaac 388 ||||||||| | ||||||||||||||||||||| Sbjct: 637 cacgacgagctggacttcgagttcctgggcaac 669
>gb|AY580314.1| Selaginella kraussiana putative xyloglucan endotransglucosylase/hydrolase (XTH1) mRNA, complete cds Length = 849 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Plus Query: 359 gacgagatcgacttcgagttcctgggcaa 387 |||||||||||| |||||||||||||||| Sbjct: 295 gacgagatcgacctcgagttcctgggcaa 323
>gb|DQ100338.1| Eucalyptus globulus putative xyloglucan endotransglycosylase/hydrolase (XTH2) mRNA, partial cds Length = 936 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Plus Query: 356 cacgacgagatcgacttcgagttcctggg 384 ||||||||||| ||||||||||||||||| Sbjct: 51 cacgacgagattgacttcgagttcctggg 79
>dbj|AP005311.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0482F12 Length = 147735 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 356 cacgacgagatcgacttcgagttcctgggcaac 388 ||||||||| | ||||||||||||||||||||| Sbjct: 126751 cacgacgagctggacttcgagttcctgggcaac 126783
>dbj|AP004886.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0576F08 Length = 135314 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 356 cacgacgagatcgacttcgagttcctgggcaac 388 ||||||||| | ||||||||||||||||||||| Sbjct: 8900 cacgacgagctggacttcgagttcctgggcaac 8932
>dbj|AK073018.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023149H23, full insert sequence Length = 1562 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 356 cacgacgagatcgacttcgagttcctgggcaac 388 ||||||||| | ||||||||||||||||||||| Sbjct: 637 cacgacgagctggacttcgagttcctgggcaac 669
>gb|AY098522.1| Ananas comosus xyloglucan endotransglycosylase mRNA, partial cds Length = 742 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 356 cacgacgagatcgacttcgagttcctgggcaac 388 |||||||||||||| ||||||||||| |||||| Sbjct: 61 cacgacgagatcgatttcgagttcctcggcaac 93
>gb|AC134236.4| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0056G13, complete sequence Length = 148011 Score = 48.1 bits (24), Expect = 0.036 Identities = 30/32 (93%) Strand = Plus / Plus Query: 359 gacgagatcgacttcgagttcctgggcaacga 390 ||||||||||||||||||||||| ||| |||| Sbjct: 99415 gacgagatcgacttcgagttcctcggccacga 99446
>dbj|AK073730.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033058F24, full insert sequence Length = 1123 Score = 48.1 bits (24), Expect = 0.036 Identities = 30/32 (93%) Strand = Plus / Plus Query: 359 gacgagatcgacttcgagttcctgggcaacga 390 ||||||||||||||||||||||| ||| |||| Sbjct: 355 gacgagatcgacttcgagttcctcggccacga 386
>ref|XM_467280.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1368 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Plus Query: 356 cacgacgagatcgacttcgagttcctgggca 386 ||||||||| | ||||||||||||||||||| Sbjct: 480 cacgacgagctggacttcgagttcctgggca 510
>ref|XM_506903.1| PREDICTED Oryza sativa (japonica cultivar-group), B1053A04.26-1 mRNA Length = 1395 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Plus Query: 356 cacgacgagatcgacttcgagttcctgggca 386 ||||||||| | ||||||||||||||||||| Sbjct: 482 cacgacgagctggacttcgagttcctgggca 512
>ref|XM_450915.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1457 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Plus Query: 355 ccacgacgagatcgacttcgagttcctgggcaacg 389 |||||||||| | |||||||||||||| ||||||| Sbjct: 403 ccacgacgaggtggacttcgagttcctcggcaacg 437
>emb|AJ295944.1|FPR295944 Festuca pratensis mRNA for Xet2 protein Length = 1189 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 302 ggcaactccgccggcaccgtcac 324 ||||||||||||||||||||||| Sbjct: 301 ggcaactccgccggcaccgtcac 323
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 355 ccacgacgagatcgacttcgagttcctgggcaacg 389 |||||||||| | |||||||||||||| ||||||| Sbjct: 13727111 ccacgacgaggtggacttcgagttcctcggcaacg 13727077
>dbj|AP005859.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1053A04 Length = 144321 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Plus Query: 356 cacgacgagatcgacttcgagttcctgggca 386 ||||||||| | ||||||||||||||||||| Sbjct: 106130 cacgacgagctggacttcgagttcctgggca 106160
>dbj|AP006056.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1172G12 Length = 171974 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 358 cgacgagatcgacttcgagttcctgggcaac 388 ||||||| | ||||||||||||||||||||| Sbjct: 15969 cgacgagctggacttcgagttcctgggcaac 15939 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 358 cgacgagatcgacttcgagttcctgggcaac 388 ||||||| | ||||||||||||||||||||| Sbjct: 857 cgacgagctggacttcgagttcctgggcaac 827
>dbj|AP003510.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0528E04 Length = 170701 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 358 cgacgagatcgacttcgagttcctgggcaac 388 ||||||| | ||||||||||||||||||||| Sbjct: 161338 cgacgagctggacttcgagttcctgggcaac 161308 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 358 cgacgagatcgacttcgagttcctgggcaac 388 ||||||| | ||||||||||||||||||||| Sbjct: 146226 cgacgagctggacttcgagttcctgggcaac 146196
>dbj|AP005904.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1040D06 Length = 155034 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 355 ccacgacgagatcgacttcgagttcctgggcaacg 389 |||||||||| | |||||||||||||| ||||||| Sbjct: 125225 ccacgacgaggtggacttcgagttcctcggcaacg 125191
>dbj|AK122079.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033119N05, full insert sequence Length = 1621 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Plus Query: 355 ccacgacgagatcgacttcgagttcctgggcaacg 389 |||||||||| | |||||||||||||| ||||||| Sbjct: 595 ccacgacgaggtggacttcgagttcctcggcaacg 629
>dbj|AK105864.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-A05, full insert sequence Length = 1368 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Plus Query: 356 cacgacgagatcgacttcgagttcctgggca 386 ||||||||| | ||||||||||||||||||| Sbjct: 480 cacgacgagctggacttcgagttcctgggca 510
>dbj|AK101915.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033071H14, full insert sequence Length = 1394 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Plus Query: 356 cacgacgagatcgacttcgagttcctgggca 386 ||||||||| | ||||||||||||||||||| Sbjct: 481 cacgacgagctggacttcgagttcctgggca 511
>dbj|AK060495.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-016-E08, full insert sequence Length = 1457 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Plus Query: 355 ccacgacgagatcgacttcgagttcctgggcaacg 389 |||||||||| | |||||||||||||| ||||||| Sbjct: 403 ccacgacgaggtggacttcgagttcctcggcaacg 437
>emb|AL807773.7| Mouse DNA sequence from clone RP23-228L24 on chromosome X, complete sequence Length = 186645 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 221 agcaacatctcaggcagtatgct 243 ||||||||||||||||||||||| Sbjct: 91274 agcaacatctcaggcagtatgct 91252
>ref|XM_749570.1| Aspergillus fumigatus Af293 DNA polymerase epsilon, catalytic subunit A/POL2 (Afu3g09560) partial mRNA Length = 6693 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 113 aagctcgggctcgtcggcgcca 134 |||||||||||||||||||||| Sbjct: 3863 aagctcgggctcgtcggcgcca 3884
>gb|AY144593.1| Malus x domestica xyloglucan endotransglycosylase (XET01) mRNA, complete cds Length = 1268 Score = 44.1 bits (22), Expect = 0.56 Identities = 31/34 (91%) Strand = Plus / Plus Query: 351 acgaccacgacgagatcgacttcgagttcctggg 384 |||| |||||||||||||| ||||||||| |||| Sbjct: 365 acgaacacgacgagatcgatttcgagttcttggg 398
>gb|AC118981.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0060E18, from chromosome 3, complete sequence Length = 147983 Score = 44.1 bits (22), Expect = 0.56 Identities = 31/34 (91%) Strand = Plus / Minus Query: 356 cacgacgagatcgacttcgagttcctgggcaacg 389 ||||||||| | ||||||||||||||||| |||| Sbjct: 62922 cacgacgagctggacttcgagttcctggggaacg 62889
>dbj|AK061284.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-G03, full insert sequence Length = 1194 Score = 44.1 bits (22), Expect = 0.56 Identities = 31/34 (91%) Strand = Plus / Plus Query: 356 cacgacgagatcgacttcgagttcctgggcaacg 389 ||||||||| | ||||||||||||||||| |||| Sbjct: 437 cacgacgagctggacttcgagttcctggggaacg 470
>gb|AY106609.1| Zea mays PCO140750 mRNA sequence Length = 634 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 121 gctcgtcggcgccaacttcgcg 142 |||||||||||||||||||||| Sbjct: 417 gctcgtcggcgccaacttcgcg 438
>dbj|AB095368.1| Pyrus communis PC-XET1 mRNA for xyloglucan endotransglycosylase, partial cds Length = 1292 Score = 44.1 bits (22), Expect = 0.56 Identities = 31/34 (91%) Strand = Plus / Plus Query: 351 acgaccacgacgagatcgacttcgagttcctggg 384 |||| |||||||||||||| ||||||||| |||| Sbjct: 431 acgaacacgacgagatcgatttcgagttcttggg 464
>ref|XM_470453.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1215 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Plus Query: 356 cacgacgagatcgacttcgagttcctgggcaac 388 ||||||||| | |||||||||||| |||||||| Sbjct: 460 cacgacgagctggacttcgagttcttgggcaac 492
>gb|BT016517.1| Zea mays clone Contig350 mRNA sequence Length = 1236 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 494 aactacaccatcttctggaac 514 ||||||||||||||||||||| Sbjct: 830 aactacaccatcttctggaac 850
>gb|AY023104.1| Oryza sativa microsatellite MRG5429 containing (GAG)X9, genomic sequence Length = 227 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 304 caactccgccggcaccgtcac 324 ||||||||||||||||||||| Sbjct: 169 caactccgccggcaccgtcac 149
>gb|AC120506.5| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0006O08 map S15179S, complete sequence Length = 166005 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Minus Query: 356 cacgacgagatcgacttcgagttcctgggcaac 388 ||||||||| | |||||||||||| |||||||| Sbjct: 89250 cacgacgagctggacttcgagttcttgggcaac 89218
>gb|AY196994.1| Streptomyces griseoruber heda cluster, complete sequence Length = 45603 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 422 gtgttcgcggacggcgtgggc 442 ||||||||||||||||||||| Sbjct: 37843 gtgttcgcggacggcgtgggc 37823
>gb|AC117644.6| Mus musculus chromosome 7, clone RP23-238L7, complete sequence Length = 217015 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 44 acaggcaaggaggagatggggatgt 68 ||||| ||||||||||||||||||| Sbjct: 8484 acaggtaaggaggagatggggatgt 8508
>gb|AC156555.8| Mus musculus chromosome 7, clone RP23-59P20, complete sequence Length = 247652 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 44 acaggcaaggaggagatggggatgt 68 ||||| ||||||||||||||||||| Sbjct: 27747 acaggtaaggaggagatggggatgt 27723
>gb|AE012494.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 402 of 460 of the complete genome Length = 10873 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 100 cgcggcggtgctgaagctcgg 120 ||||||||||||||||||||| Sbjct: 7430 cgcggcggtgctgaagctcgg 7450
>gb|AF223419.1|AF223419 Asparagus officinalis xyloglucan endotransglycosylase XET1 (AoXET1) mRNA, complete cds Length = 1128 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Plus Query: 356 cacgacgagatcgacttcgagttcctgggcaac 388 ||||| |||||||||||||| ||||| |||||| Sbjct: 314 cacgatgagatcgacttcgaattcctcggcaac 346
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 349 cgacgaccacgacgagatcga 369 ||||||||||||||||||||| Sbjct: 427437 cgacgaccacgacgagatcga 427457 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 95 gccttcgcggcggtgctgaa 114 |||||||||||||||||||| Sbjct: 860228 gccttcgcggcggtgctgaa 860209
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 100 cgcggcggtgctgaagctcgg 120 ||||||||||||||||||||| Sbjct: 4501730 cgcggcggtgctgaagctcgg 4501750
>gb|AC006063.1|AC006063 Homo sapiens 12p13.3 PAC RP3-377H17 (Roswell Park Cancer Institute Human PAC Library) complete sequence Length = 150001 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 488 ttccacaactacaccatcttc 508 ||||||||||||||||||||| Sbjct: 135522 ttccacaactacaccatcttc 135542
>dbj|AK104577.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-307-A12, full insert sequence Length = 1326 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Plus Query: 356 cacgacgagatcgacttcgagttcctgggcaac 388 ||||||||| | |||||||||||| |||||||| Sbjct: 411 cacgacgagctggacttcgagttcttgggcaac 443
>dbj|AK071886.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013047H18, full insert sequence Length = 1359 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Plus Query: 356 cacgacgagatcgacttcgagttcctgggcaac 388 ||||||||| | |||||||||||| |||||||| Sbjct: 464 cacgacgagctggacttcgagttcttgggcaac 496
>gb|DQ279095.1| Rosa x borboniana xyloglucan endotransglucosylase hydrolase mRNA, complete cds Length = 1130 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 356 cacgacgagatcgacttcgagttcctggg 384 ||||| |||||||||||||||||| |||| Sbjct: 354 cacgatgagatcgacttcgagttcttggg 382
>ref|NM_118714.3| Arabidopsis thaliana XTR9 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 9); hydrolase, acting on glycosyl bonds / hydrolase, hydrolyzing O-glycosyl compounds AT4G25820 (XTR9) mRNA, complete cds Length = 1089 Score = 40.1 bits (20), Expect = 8.7 Identities = 56/68 (82%) Strand = Plus / Plus Query: 449 gagatgcagttctacccctggttcgaccccaccgccgacttccacaactacaccatcttc 508 |||||||||||| | ||||||||| ||||| || || ||||||| ||||||| || | Sbjct: 449 gagatgcagttccgtctctggttcgatcccactgcggatttccacacctacaccgtccac 508 Query: 509 tggaaccc 516 |||||||| Sbjct: 509 tggaaccc 516
>ref|NM_197337.1| Oryza sativa (japonica cultivar-group) putative cytochrome P450 (OSJNBa0026L12.10), mRNA Length = 1545 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 348 gcgacgaccacgacgagatc 367 |||||||||||||||||||| Sbjct: 1040 gcgacgaccacgacgagatc 1059
>ref|NM_197336.1| Oryza sativa (japonica cultivar-group) putative cytochrome P450 (OSJNBa0026L12.11), mRNA Length = 612 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 348 gcgacgaccacgacgagatc 367 |||||||||||||||||||| Sbjct: 68 gcgacgaccacgacgagatc 87
>ref|NM_197334.1| Oryza sativa (japonica cultivar-group) putative cytochrome P450 (OSJNBa0026L12.29), mRNA Length = 1451 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 348 gcgacgaccacgacgagatc 367 |||||||||||||||||||| Sbjct: 956 gcgacgaccacgacgagatc 975
>ref|NM_196893.1| Oryza sativa (japonica cultivar-group) putative early nodulin gene (Enod) related protein (OSJNBa0071K18.9), mRNA Length = 1384 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 122 ctcgtcggcgccaacttcgc 141 |||||||||||||||||||| Sbjct: 336 ctcgtcggcgccaacttcgc 355
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence Length = 3587082 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 100 cgcggcggtgctgaagctcgggct 123 |||||||||||||| ||||||||| Sbjct: 1231656 cgcggcggtgctgacgctcgggct 1231679
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 348 gcgacgaccacgacgagatc 367 |||||||||||||||||||| Sbjct: 2336493 gcgacgaccacgacgagatc 2336474
>ref|XM_473111.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1107 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 122 ctcgtcggcgccaacttcgc 141 |||||||||||||||||||| Sbjct: 313 ctcgtcggcgccaacttcgc 332
>gb|AY234385.1|AY234384S2 Rubrivivax gelatinosus strain S1 3' region photosynthesis gene cluster, partial sequence Length = 5220 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 cgtggccttcgcggcggtgc 110 |||||||||||||||||||| Sbjct: 4634 cgtggccttcgcggcggtgc 4653
>gb|BC079169.1| Rattus norvegicus similar to hypothetical protein FLJ20436, mRNA (cDNA clone MGC:94200 IMAGE:7129861), complete cds Length = 1964 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 195 gggagcacctcacgctctccctcg 218 |||||||||||||||||| ||||| Sbjct: 1576 gggagcacctcacgctcttcctcg 1553
>gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome Length = 3814139 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 349 cgacgaccacgacgagatcgacttcgag 376 ||||||||||||||||| || ||||||| Sbjct: 256516 cgacgaccacgacgagagcgtcttcgag 256543
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome Length = 3928089 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 553 ccgcgtgttccgcaactacg 572 |||||||||||||||||||| Sbjct: 96186 ccgcgtgttccgcaactacg 96205
>gb|AC129177.3| Mus musculus BAC clone RP23-175A22 from 3, complete sequence Length = 229072 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 276 tatccaccttgatcaagctggtca 299 ||||| |||||||||||||||||| Sbjct: 201950 tatcccccttgatcaagctggtca 201973
>gb|AC110508.8| Mus musculus chromosome 3, clone RP23-382L1, complete sequence Length = 224790 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 276 tatccaccttgatcaagctggtca 299 ||||| |||||||||||||||||| Sbjct: 187821 tatcccccttgatcaagctggtca 187798
>ref|NM_001004244.1| Rattus norvegicus similar to hypothetical protein FLJ20436 (RGD1303127), mRNA Length = 1964 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 195 gggagcacctcacgctctccctcg 218 |||||||||||||||||| ||||| Sbjct: 1576 gggagcacctcacgctcttcctcg 1553
>emb|AL512884.15| Human DNA sequence from clone RP13-775K13 on chromosome Xp11.1-11.22, complete sequence Length = 157064 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 42 ccacaggcaaggaggagatg 61 |||||||||||||||||||| Sbjct: 46936 ccacaggcaaggaggagatg 46917
>gb|AC027038.12| Oryza sativa chromosome 10 BAC OSJNBa0071K18 genomic sequence, complete sequence Length = 149758 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 122 ctcgtcggcgccaacttcgc 141 |||||||||||||||||||| Sbjct: 103137 ctcgtcggcgccaacttcgc 103118
>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome Length = 4501104 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 368 gacttcgagttcctgggcaa 387 |||||||||||||||||||| Sbjct: 3333298 gacttcgagttcctgggcaa 3333279 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 6 actcgaagtcgtcgatcgca 25 |||||||||||||||||||| Sbjct: 270582 actcgaagtcgtcgatcgca 270563
>emb|AL731626.4|OSJN00271 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0002J11, complete sequence Length = 143582 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 122 ctcgtcggcgccaacttcgc 141 |||||||||||||||||||| Sbjct: 126662 ctcgtcggcgccaacttcgc 126681
>emb|AL662969.3|OSJN00169 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0043L24, complete sequence Length = 164577 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 122 ctcgtcggcgccaacttcgc 141 |||||||||||||||||||| Sbjct: 69282 ctcgtcggcgccaacttcgc 69301
>emb|AL161564.2|ATCHRIV64 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 64 Length = 196286 Score = 40.1 bits (20), Expect = 8.7 Identities = 56/68 (82%) Strand = Plus / Plus Query: 449 gagatgcagttctacccctggttcgaccccaccgccgacttccacaactacaccatcttc 508 |||||||||||| | ||||||||| ||||| || || ||||||| ||||||| || | Sbjct: 19332 gagatgcagttccgtctctggttcgatcccactgcggatttccacacctacaccgtccac 19391 Query: 509 tggaaccc 516 |||||||| Sbjct: 19392 tggaaccc 19399
>emb|AL049480.1|ATF14M19 Arabidopsis thaliana DNA chromosome 4, BAC clone F14M19 (ESSA project) Length = 91228 Score = 40.1 bits (20), Expect = 8.7 Identities = 56/68 (82%) Strand = Plus / Plus Query: 449 gagatgcagttctacccctggttcgaccccaccgccgacttccacaactacaccatcttc 508 |||||||||||| | ||||||||| ||||| || || ||||||| ||||||| || | Sbjct: 28253 gagatgcagttccgtctctggttcgatcccactgcggatttccacacctacaccgtccac 28312 Query: 509 tggaaccc 516 |||||||| Sbjct: 28313 tggaaccc 28320
>emb|BX914217.19| Zebrafish DNA sequence from clone DKEY-175H14 in linkage group 18, complete sequence Length = 133981 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 228 tctcaggcagtatgctccgg 247 |||||||||||||||||||| Sbjct: 92422 tctcaggcagtatgctccgg 92403
>gb|AC080128.21| Homo sapiens 3 BAC RP11-404G16 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 181241 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 45 caggcaaggaggagatgggg 64 |||||||||||||||||||| Sbjct: 9758 caggcaaggaggagatgggg 9777
>gb|AC068924.11| Oryza sativa chromosome 10 BAC OSJNBa0026L12 genomic sequence, complete sequence Length = 152172 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 348 gcgacgaccacgacgagatc 367 |||||||||||||||||||| Sbjct: 67663 gcgacgaccacgacgagatc 67644 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 348 gcgacgaccacgacgagatc 367 |||||||||||||||||||| Sbjct: 63355 gcgacgaccacgacgagatc 63336 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 348 gcgacgaccacgacgagatc 367 |||||||||||||||||||| Sbjct: 56639 gcgacgaccacgacgagatc 56620
>gb|AY093183.1| Arabidopsis thaliana putative xyloglucan endo-1, 4-beta-D-glucanase (At4g25820) mRNA, complete cds Length = 1068 Score = 40.1 bits (20), Expect = 8.7 Identities = 56/68 (82%) Strand = Plus / Plus Query: 449 gagatgcagttctacccctggttcgaccccaccgccgacttccacaactacaccatcttc 508 |||||||||||| | ||||||||| ||||| || || ||||||| ||||||| || | Sbjct: 449 gagatgcagttccgtctctggttcgatcccactgcggatttccacacctacaccgtccac 508 Query: 509 tggaaccc 516 |||||||| Sbjct: 509 tggaaccc 516
>gb|AC079349.6| Homo sapiens BAC clone RP11-436A7 from 4, complete sequence Length = 193632 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 31 cagttggctatccacaggca 50 |||||||||||||||||||| Sbjct: 82421 cagttggctatccacaggca 82402
>gb|AF223420.1|AF223420 Asparagus officinalis xyloglucan endotransglycosylase XET2 (AoXET2) mRNA, complete cds Length = 1375 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 362 gagatcgacttcgagttcct 381 |||||||||||||||||||| Sbjct: 345 gagatcgacttcgagttcct 364
>gb|AC091022.4| Homo sapiens chromosome 8, clone RP11-65A5, complete sequence Length = 155949 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 218 gtcagcaacatctcaggcag 237 |||||||||||||||||||| Sbjct: 34643 gtcagcaacatctcaggcag 34624
>gb|AF093672.1|AF093672 Arabidopsis thaliana xyloglucan endotransglycosylase (XTR9) mRNA, complete cds Length = 1100 Score = 40.1 bits (20), Expect = 8.7 Identities = 56/68 (82%) Strand = Plus / Plus Query: 449 gagatgcagttctacccctggttcgaccccaccgccgacttccacaactacaccatcttc 508 |||||||||||| | ||||||||| ||||| || || ||||||| ||||||| || | Sbjct: 438 gagatgcagttccgtctctggttcgatcccactgcggatttccacacctacaccgtccac 497 Query: 509 tggaaccc 516 |||||||| Sbjct: 498 tggaaccc 505
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 122 ctcgtcggcgccaacttcgc 141 |||||||||||||||||||| Sbjct: 17888779 ctcgtcggcgccaacttcgc 17888760
>gb|BT003385.1| Arabidopsis thaliana putative xyloglucan endo-1, 4-beta-D-glucanase (At4g25820) mRNA, complete cds Length = 901 Score = 40.1 bits (20), Expect = 8.7 Identities = 56/68 (82%) Strand = Plus / Plus Query: 449 gagatgcagttctacccctggttcgaccccaccgccgacttccacaactacaccatcttc 508 |||||||||||| | ||||||||| ||||| || || ||||||| ||||||| || | Sbjct: 397 gagatgcagttccgtctctggttcgatcccactgcggatttccacacctacaccgtccac 456 Query: 509 tggaaccc 516 |||||||| Sbjct: 457 tggaaccc 464
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 8.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 100 cgcggcggtgctgaagctcgggctcgtcggcg 131 ||||||||||||| ||||||||| || ||||| Sbjct: 1955817 cgcggcggtgctggagctcgggcgcgccggcg 1955786
>ref|XM_233514.2| PREDICTED: Rattus norvegicus colony stimulating factor 3 receptor (granulocyte) (predicted) (Csf3r_predicted), mRNA Length = 2572 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 493 caactacaccatcttctgga 512 |||||||||||||||||||| Sbjct: 1738 caactacaccatcttctgga 1757
>dbj|AP003077.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0520B06 Length = 142667 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 122 ctcgtcggcgccaacttcgc 141 |||||||||||||||||||| Sbjct: 8614 ctcgtcggcgccaacttcgc 8595
>dbj|AP003435.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0455H03 Length = 175947 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 122 ctcgtcggcgccaacttcgc 141 |||||||||||||||||||| Sbjct: 135901 ctcgtcggcgccaacttcgc 135882
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 359 gacgagatcgacttcgagttcctg 382 |||||||||||||||||| ||||| Sbjct: 4194088 gacgagatcgacttcgagatcctg 4194111
>dbj|AK121383.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023127I10, full insert sequence Length = 1929 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 122 ctcgtcggcgccaacttcgc 141 |||||||||||||||||||| Sbjct: 815 ctcgtcggcgccaacttcgc 834
>dbj|AK025826.1| Homo sapiens cDNA: FLJ22173 fis, clone HRC00751 Length = 1557 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 45 caggcaaggaggagatgggg 64 |||||||||||||||||||| Sbjct: 395 caggcaaggaggagatgggg 414
>ref|XM_321241.2| Anopheles gambiae str. PEST ENSANGP00000018442 (ENSANGG00000015953), partial mRNA Length = 687 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 gacgttcatctacggcagca 275 |||||||||||||||||||| Sbjct: 423 gacgttcatctacggcagca 442
>ref|XM_550978.1| Anopheles gambiae str. PEST ENSANGP00000028680 (ENSANGG00000015953), partial mRNA Length = 1953 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 gacgttcatctacggcagca 275 |||||||||||||||||||| Sbjct: 1119 gacgttcatctacggcagca 1138
>dbj|AK108201.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-140-C12, full insert sequence Length = 1375 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 122 ctcgtcggcgccaacttcgc 141 |||||||||||||||||||| Sbjct: 348 ctcgtcggcgccaacttcgc 367
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 553 ccgcgtgttccgcaactacg 572 |||||||||||||||||||| Sbjct: 326636 ccgcgtgttccgcaactacg 326617
>gb|BC082257.1| Homo sapiens chromosome 3 open reading frame 36, mRNA (cDNA clone IMAGE:6281269) Length = 1683 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 45 caggcaaggaggagatgggg 64 |||||||||||||||||||| Sbjct: 533 caggcaaggaggagatgggg 552
>gb|BC064502.1| Homo sapiens chromosome 3 open reading frame 36, mRNA (cDNA clone IMAGE:6215121) Length = 1683 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 45 caggcaaggaggagatgggg 64 |||||||||||||||||||| Sbjct: 533 caggcaaggaggagatgggg 552
>gb|BC051274.1| Homo sapiens chromosome 3 open reading frame 36, mRNA (cDNA clone IMAGE:6216010) Length = 1683 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 45 caggcaaggaggagatgggg 64 |||||||||||||||||||| Sbjct: 533 caggcaaggaggagatgggg 552
>emb|BX927072.10| Zebrafish DNA sequence from clone CH211-227D19 in linkage group 18, complete sequence Length = 157662 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 228 tctcaggcagtatgctccgg 247 |||||||||||||||||||| Sbjct: 28518 tctcaggcagtatgctccgg 28499
>ref|NM_025041.2| Homo sapiens chromosome 3 open reading frame 36 (C3orf36), mRNA Length = 1683 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 45 caggcaaggaggagatgggg 64 |||||||||||||||||||| Sbjct: 533 caggcaaggaggagatgggg 552
>dbj|AB034704.1| Rubrivivax gelatinosus photosynthetic gene cluster, complete cds, stain:IL144 Length = 58996 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 cgtggccttcgcggcggtgc 110 |||||||||||||||||||| Sbjct: 43655 cgtggccttcgcggcggtgc 43674 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,466,218 Number of Sequences: 3902068 Number of extensions: 3466218 Number of successful extensions: 77481 Number of sequences better than 10.0: 199 Number of HSP's better than 10.0 without gapping: 213 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 74774 Number of HSP's gapped (non-prelim): 2689 length of query: 638 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 615 effective length of database: 17,143,297,704 effective search space: 10543128087960 effective search space used: 10543128087960 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
