Clone Name | bart48c07 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | WRIP1_HUMAN (Q96S55) ATPase WRNIP1 (Werner helicase-interacting ... | 32 | 1.0 | 2 | FHL1_SCHPO (O14270) Fork head transcription factor 1 | 31 | 3.0 | 3 | SNX19_HUMAN (Q92543) Sorting nexin-19 | 29 | 8.6 | 4 | MOT8_HUMAN (P36021) Monocarboxylate transporter 8 (MCT 8) (X-lin... | 29 | 8.6 |
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>WRIP1_HUMAN (Q96S55) ATPase WRNIP1 (Werner helicase-interacting protein 1)| Length = 665 Score = 32.3 bits (72), Expect = 1.0 Identities = 29/114 (25%), Positives = 38/114 (33%) Frame = +3 Query: 153 DDQSDAAADVTLPALPTPAGENIVLSHGAPTPMLRLPSHRSTCXXXXXXXXXXXXGLARV 332 DD + + + A PTP+G ++ P RS+ A Sbjct: 100 DDGGETESRESYDAPPTPSGARLIPD---------FPVARSSSPGRKGSGKRPAAAAA-- 148 Query: 333 HPAVDVVPAELARGEEQEPREAVAEPDPDSRPDTDAEQKPLHGXXXXXXAAKAW 494 A P E QE EAV + D D D D E P H AA A+ Sbjct: 149 --AGSASPRSWDEAEAQEEEEAVGDGDGDGDADADGEDDPGHWDADAAEAATAF 200
>FHL1_SCHPO (O14270) Fork head transcription factor 1| Length = 743 Score = 30.8 bits (68), Expect = 3.0 Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 1/32 (3%) Frame = +3 Query: 360 ELARGEEQEPREAVAEPDPDSRPDT-DAEQKP 452 EL +G+ P + V PD + PDT DA QKP Sbjct: 261 ELKQGKSTSPSDTVLHPDLNGSPDTGDATQKP 292
>SNX19_HUMAN (Q92543) Sorting nexin-19| Length = 992 Score = 29.3 bits (64), Expect = 8.6 Identities = 12/39 (30%), Positives = 21/39 (53%) Frame = +3 Query: 330 VHPAVDVVPAELARGEEQEPREAVAEPDPDSRPDTDAEQ 446 V VD + R E Q P E ++E + +S+P T+ ++ Sbjct: 681 VSAIVDTLKTAFPRSEPQSPTEELSEAETESKPQTEGKK 719
>MOT8_HUMAN (P36021) Monocarboxylate transporter 8 (MCT 8) (X-linked| PEST-containing transporter) (MCT 7) Length = 613 Score = 29.3 bits (64), Expect = 8.6 Identities = 10/26 (38%), Positives = 18/26 (69%) Frame = +3 Query: 378 EQEPREAVAEPDPDSRPDTDAEQKPL 455 +QE +E V P+P+S P+ + E +P+ Sbjct: 93 DQEQQEPVGSPEPESEPEPEPEPEPV 118 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 39,922,127 Number of Sequences: 219361 Number of extensions: 629599 Number of successful extensions: 2834 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 2639 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2821 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4986986160 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)