ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart48c07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_462833.1| Oryza sativa (japonica cultivar-group), predic... 48 0.032
2dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.032
3dbj|AP003103.2| Oryza sativa (japonica cultivar-group) genomic D... 48 0.032
4dbj|AK108762.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.032
5dbj|AP002862.2| Oryza sativa (japonica cultivar-group) genomic D... 48 0.032
6gb|AF349677.1| Cochliobolus carbonum histone deacetylase 2 (HDC2... 44 0.51
7gb|AC023787.8| Homo sapiens BAC clone RP11-546M8 from 2, complet... 44 0.51
8gb|CP000148.1| Geobacter metallireducens GS-15, complete genome 42 2.0
9ref|XM_482371.1| Oryza sativa (japonica cultivar-group), mRNA 42 2.0
10gb|AC007589.8| Drosophila melanogaster clone BACR20D10, complete... 42 2.0
11gb|AC009537.6| Drosophila melanogaster clone BACR11M01, complete... 42 2.0
12gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 42 2.0
13gb|AY359007.1| Homo sapiens clone DNA57694 KIPV467 (UNQ467) mRNA... 42 2.0
14ref|XM_501233.1| Yarrowia lipolytica CLIB122, YALI0B22704g predi... 42 2.0
15gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete ... 42 2.0
16gb|CP000088.1| Thermobifida fusca YX, complete genome 42 2.0
17emb|AL939113.1|SCO939113 Streptomyces coelicolor A3(2) complete ... 42 2.0
18gb|AD001502.1|CH19F21246 Homo sapiens DNA from chromosome 19-cos... 42 2.0
19dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.0
20dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.0
21gb|AC134234.3| Oryza sativa (japonica cultivar-group) chromosome... 42 2.0
22ref|NM_207392.1| Homo sapiens KIPV467 (UNQ467), mRNA 42 2.0
23dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 42 2.0
24gb|AE005129.1| Halobacterium sp. NRC-1 section 160 of 170 of the... 42 2.0
25gb|AE005007.1| Halobacterium sp. NRC-1 section 38 of 170 of the ... 42 2.0
26dbj|AP005158.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.0
27dbj|AK119809.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.0
28dbj|AP004658.4| Oryza sativa (japonica cultivar-group) genomic D... 42 2.0
29gb|AE003604.4| Drosophila melanogaster chromosome 3R, section 4 ... 42 2.0
30emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB1... 42 2.0
31emb|AJ293408.1|HSA293408 Homo sapiens mRNA differentially expres... 42 2.0
32ref|NM_187610.1| Oryza sativa (japonica cultivar-group), predic... 40 7.9
33ref|NM_184914.1| Oryza sativa (japonica cultivar-group), mRNA 40 7.9
34gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome 40 7.9
35gb|AC130597.2| Oryza sativa (japonica cultivar-group) chromosome... 40 7.9
36gb|AY062258.1| Oryza sativa (japonica cultivar-group) dev-stage ... 40 7.9
37gb|AC107226.2| Oryza sativa (japonica cultivar-group) chromosome... 40 7.9
38emb|AL139044.15| Human DNA sequence from clone RP11-6B20 on chro... 40 7.9
39gb|AY310358.1| Oryza sativa (japonica cultivar-group) allene oxi... 40 7.9
40gb|DQ398934.1| Petromyzon marinus neurofilament subunit NF-95 mR... 40 7.9
41gb|DQ398933.1| Petromyzon marinus neurofilament subunit NF-132 m... 40 7.9
42gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hilde... 40 7.9
43gb|AE016820.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10... 40 7.9
44dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.9
45dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.9
46gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome 40 7.9
47dbj|AP005589.2| Oryza sativa (japonica cultivar-group) genomic D... 40 7.9
48emb|AL512543.1|H0505A02 Oryza sativa genomic DNA, chromosome 4, ... 40 7.9
49ref|NM_211996.1| Eremothecium gossypii AGR268Wp (AGR268W), mRNA 40 7.9
50dbj|AK066138.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.9
51dbj|AK061758.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.9
52dbj|AK060312.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.9
53emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome 40 7.9
54gb|U19361.1|PMU19361 Petromyzon marinus neurofilament subunit NF... 40 7.9
55gb|AC091494.9| Oryza sativa chromosome 3 BAC OSJNBa0070N04 genom... 40 7.9
56emb|AL596088.14| Mouse DNA sequence from clone RP23-157O10 on ch... 40 7.9 
>ref|XM_462833.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 597

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                   
Query: 322 tcgcccgcgtccatcccgccgtcg 345
           ||||||||||||||||||||||||
Sbjct: 563 tcgcccgcgtccatcccgccgtcg 540
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                        
Query: 322      tcgcccgcgtccatcccgccgtcg 345
                ||||||||||||||||||||||||
Sbjct: 10028092 tcgcccgcgtccatcccgccgtcg 10028069
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>dbj|AP003103.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1085F09
          Length = 132713

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                      
Query: 322    tcgcccgcgtccatcccgccgtcg 345
              ||||||||||||||||||||||||
Sbjct: 108374 tcgcccgcgtccatcccgccgtcg 108351
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>dbj|AK108762.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-150-G07, full
           insert sequence
          Length = 1619

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 322 tcgcccgcgtccatcccgccgtcg 345
           ||||||||||||||||||||||||
Sbjct: 953 tcgcccgcgtccatcccgccgtcg 976
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>dbj|AP002862.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:OSJNBa0036E02
          Length = 145931

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                      
Query: 322    tcgcccgcgtccatcccgccgtcg 345
              ||||||||||||||||||||||||
Sbjct: 122585 tcgcccgcgtccatcccgccgtcg 122562
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>gb|AF349677.1| Cochliobolus carbonum histone deacetylase 2 (HDC2) gene, complete cds
          Length = 2906

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 16   ctgctgtgcctgctacaatggc 37
            ||||||||||||||||||||||
Sbjct: 2460 ctgctgtgcctgctacaatggc 2481
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>gb|AC023787.8| Homo sapiens BAC clone RP11-546M8 from 2, complete sequence
          Length = 144620

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 497   ggtggaggtgctgaggaggttc 518
             ||||||||||||||||||||||
Sbjct: 56987 ggtggaggtgctgaggaggttc 57008
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>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome
          Length = 3997420

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 54     gccgtgctgctcctctccctc 74
              |||||||||||||||||||||
Sbjct: 999802 gccgtgctgctcctctccctc 999822
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>ref|XM_482371.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1449

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 52 tcgccgtgctgctcctctccc 72
          |||||||||||||||||||||
Sbjct: 41 tcgccgtgctgctcctctccc 61
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>gb|AC007589.8| Drosophila melanogaster clone BACR20D10, complete sequence
          Length = 164712

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 331   tccatcccgccgtcgacgtcg 351
             |||||||||||||||||||||
Sbjct: 28367 tccatcccgccgtcgacgtcg 28347
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>gb|AC009537.6| Drosophila melanogaster clone BACR11M01, complete sequence
          Length = 160712

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 331    tccatcccgccgtcgacgtcg 351
              |||||||||||||||||||||
Sbjct: 155857 tccatcccgccgtcgacgtcg 155837
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 63      ctcctctccctcctggccgtc 83
               |||||||||||||||||||||
Sbjct: 8172064 ctcctctccctcctggccgtc 8172044



 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 312      caccacggcctcgcccgcgt 331
                ||||||||||||||||||||
Sbjct: 31898709 caccacggcctcgcccgcgt 31898690



 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 59      gctgctcctctccctcctgg 78
               ||||||||||||||||||||
Sbjct: 6577491 gctgctcctctccctcctgg 6577510
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>gb|AY359007.1| Homo sapiens clone DNA57694 KIPV467 (UNQ467) mRNA, complete cds
          Length = 415

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 54 gccgtgctgctcctctccctcctgg 78
          |||||| ||||||||||||||||||
Sbjct: 34 gccgtggtgctcctctccctcctgg 58
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>ref|XM_501233.1| Yarrowia lipolytica CLIB122, YALI0B22704g predicted mRNA
          Length = 4824

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 552  gagcaggacgtggaggagcacgacg 576
            |||||||||||||||||||| ||||
Sbjct: 3412 gagcaggacgtggaggagcaggacg 3436



 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 552  gagcaggacgtggaggagca 571
            ||||||||||||||||||||
Sbjct: 3427 gagcaggacgtggaggagca 3446
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>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence
          Length = 3806533

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 301     ggtggacgcgccaccacggcc 321
               |||||||||||||||||||||
Sbjct: 2920891 ggtggacgcgccaccacggcc 2920911
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>gb|CP000088.1| Thermobifida fusca YX, complete genome
          Length = 3642249

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 41      gctcgccaccctcgccgtgct 61
               |||||||||||||||||||||
Sbjct: 3365831 gctcgccaccctcgccgtgct 3365851
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>emb|AL939113.1|SCO939113 Streptomyces coelicolor A3(2) complete genome; segment 10/29
          Length = 310550

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 41     gctcgccaccctcgccgtgctgctc 65
              ||||||||||||||||| |||||||
Sbjct: 247473 gctcgccaccctcgccgggctgctc 247449
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>gb|AD001502.1|CH19F21246 Homo sapiens DNA from chromosome 19-cosmid f21246, genomic sequence
          Length = 44679

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 54    gccgtgctgctcctctccctcctgg 78
             |||||| ||||||||||||||||||
Sbjct: 24550 gccgtggtgctcctctccctcctgg 24526
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 52       tcgccgtgctgctcctctccc 72
                |||||||||||||||||||||
Sbjct: 19676173 tcgccgtgctgctcctctccc 19676193
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 63      ctcctctccctcctggccgtc 83
               |||||||||||||||||||||
Sbjct: 8169899 ctcctctccctcctggccgtc 8169879



 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 312      caccacggcctcgcccgcgt 331
                ||||||||||||||||||||
Sbjct: 31989225 caccacggcctcgcccgcgt 31989206



 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 59      gctgctcctctccctcctgg 78
               ||||||||||||||||||||
Sbjct: 6576704 gctgctcctctccctcctgg 6576723
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>gb|AC134234.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0019J12,
              complete sequence
          Length = 195583

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 63     ctcctctccctcctggccgtc 83
              |||||||||||||||||||||
Sbjct: 103494 ctcctctccctcctggccgtc 103474
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>ref|NM_207392.1| Homo sapiens KIPV467 (UNQ467), mRNA
          Length = 415

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 54 gccgtgctgctcctctccctcctgg 78
          |||||| ||||||||||||||||||
Sbjct: 34 gccgtggtgctcctctccctcctgg 58
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 356     cgccgagcttgcccgcggcga 376
               |||||||||||||||||||||
Sbjct: 4660535 cgccgagcttgcccgcggcga 4660515



 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 356     cgccgagcttgcccgcggcg 375
               ||||||||||||||||||||
Sbjct: 2442974 cgccgagcttgcccgcggcg 2442993
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>gb|AE005129.1| Halobacterium sp. NRC-1 section 160 of 170 of the complete genome
          Length = 18209

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 427  cggacaccgacgccgagcaga 447
            |||||||||||||||||||||
Sbjct: 3959 cggacaccgacgccgagcaga 3939
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>gb|AE005007.1| Halobacterium sp. NRC-1 section 38 of 170 of the complete genome
          Length = 10293

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 424  gcccggacaccgacgccgagc 444
            |||||||||||||||||||||
Sbjct: 8209 gcccggacaccgacgccgagc 8229
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>dbj|AP005158.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
            clone:OSJNBa0007M04
          Length = 176293

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 52   tcgccgtgctgctcctctccc 72
            |||||||||||||||||||||
Sbjct: 5124 tcgccgtgctgctcctctccc 5144
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>dbj|AK119809.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-176-H02, full
            insert sequence
          Length = 3078

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 63   ctcctctccctcctggccgtc 83
            |||||||||||||||||||||
Sbjct: 2904 ctcctctccctcctggccgtc 2924
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>dbj|AP004658.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0042B03
          Length = 167669

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 52     tcgccgtgctgctcctctccc 72
              |||||||||||||||||||||
Sbjct: 151733 tcgccgtgctgctcctctccc 151753
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>gb|AE003604.4| Drosophila melanogaster chromosome 3R, section 4 of 118 of the complete
              sequence
          Length = 303434

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 331    tccatcccgccgtcgacgtcg 351
              |||||||||||||||||||||
Sbjct: 123348 tccatcccgccgtcgacgtcg 123328
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>emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB122 of Yarrowia lipolytica
          Length = 3066374

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 552     gagcaggacgtggaggagcacgacg 576
               |||||||||||||||||||| ||||
Sbjct: 2981782 gagcaggacgtggaggagcaggacg 2981758



 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 552     gagcaggacgtggaggagca 571
               ||||||||||||||||||||
Sbjct: 2981767 gagcaggacgtggaggagca 2981748
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>emb|AJ293408.1|HSA293408 Homo sapiens mRNA differentially expressed in malignant melanoma,
          clone NN i5
          Length = 529

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 54 gccgtgctgctcctctccctcctgg 78
          |||||| ||||||||||||||||||
Sbjct: 72 gccgtggtgctcctctccctcctgg 96
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>ref|NM_187610.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1437

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 59  gctgctcctctccctcctgg 78
           ||||||||||||||||||||
Sbjct: 372 gctgctcctctccctcctgg 391
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>ref|NM_184914.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 4185

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 312 caccacggcctcgcccgcgt 331
           ||||||||||||||||||||
Sbjct: 712 caccacggcctcgcccgcgt 693
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>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome
          Length = 6438405

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 337     ccgccgtcgacgtcgtgcccgccgagct 364
               |||||||||||| | |||||||||||||
Sbjct: 1517589 ccgccgtcgacgccctgcccgccgagct 1517562
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>gb|AC130597.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0017K09, complete sequence
          Length = 155525

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 557   ggacgtggaggagcacgacg 576
             ||||||||||||||||||||
Sbjct: 65586 ggacgtggaggagcacgacg 65567
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>gb|AY062258.1| Oryza sativa (japonica cultivar-group) dev-stage seedling allene
           oxide synthase (AOS) gene, complete cds
          Length = 2465

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 59  gctgctcctctccctcctgg 78
           ||||||||||||||||||||
Sbjct: 767 gctgctcctctccctcctgg 786
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>gb|AC107226.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0081P02,
              complete sequence
          Length = 162425

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 59     gctgctcctctccctcctgg 78
              ||||||||||||||||||||
Sbjct: 120253 gctgctcctctccctcctgg 120272
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>emb|AL139044.15| Human DNA sequence from clone RP11-6B20 on chromosome 6 Contains the
             ITPR3 gene for inositol 1,4,5-triphosphate receptor type
             3, a novel gene and the IHPK3 gene for inositol
             hexaphosphate kinase 3, complete sequence
          Length = 134250

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 184   cccttccggctctgcccacc 203
             ||||||||||||||||||||
Sbjct: 14188 cccttccggctctgcccacc 14169
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>gb|AY310358.1| Oryza sativa (japonica cultivar-group) allene oxide synthase mRNA,
           complete cds
          Length = 1775

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 59  gctgctcctctccctcctgg 78
           ||||||||||||||||||||
Sbjct: 489 gctgctcctctccctcctgg 508
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>gb|DQ398934.1| Petromyzon marinus neurofilament subunit NF-95 mRNA, complete cds
          Length = 2229

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 536 ccaccaccgccaccatgagc 555
           ||||||||||||||||||||
Sbjct: 119 ccaccaccgccaccatgagc 138
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>gb|DQ398933.1| Petromyzon marinus neurofilament subunit NF-132 mRNA, complete cds
          Length = 2518

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 536 ccaccaccgccaccatgagc 555
           ||||||||||||||||||||
Sbjct: 124 ccaccaccgccaccatgagc 143
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>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete genome
          Length = 3570858

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 538     accaccgccaccatgagcag 557
               ||||||||||||||||||||
Sbjct: 1549477 accaccgccaccatgagcag 1549496
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>gb|AE016820.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VII,
               complete sequence
          Length = 1476513

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 552     gagcaggacgtggaggagca 571
               ||||||||||||||||||||
Sbjct: 1242172 gagcaggacgtggaggagca 1242191
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 314     ccacggcctcgcccgcgtcc 333
               ||||||||||||||||||||
Sbjct: 4257259 ccacggcctcgcccgcgtcc 4257240
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 557      ggacgtggaggagcacgacg 576
                ||||||||||||||||||||
Sbjct: 24551404 ggacgtggaggagcacgacg 24551385
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>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome
          Length = 3052398

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 322     tcgcccgcgtccatcccgcc 341
               ||||||||||||||||||||
Sbjct: 1929574 tcgcccgcgtccatcccgcc 1929555



 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 363    cttgcccgcggcgaagaaca 382
              ||||||||||||||||||||
Sbjct: 818765 cttgcccgcggcgaagaaca 818746
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>dbj|AP005589.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0523B07
          Length = 170510

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 314   ccacggcctcgcccgcgtcc 333
             ||||||||||||||||||||
Sbjct: 81018 ccacggcctcgcccgcgtcc 80999
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>emb|AL512543.1|H0505A02 Oryza sativa genomic DNA, chromosome 4, BAC clone: H0505A02, complete
             sequence
          Length = 83989

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 314   ccacggcctcgcccgcgtcc 333
             ||||||||||||||||||||
Sbjct: 53663 ccacggcctcgcccgcgtcc 53682
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>ref|NM_211996.1| Eremothecium gossypii AGR268Wp (AGR268W), mRNA
          Length = 1041

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 552 gagcaggacgtggaggagca 571
           ||||||||||||||||||||
Sbjct: 283 gagcaggacgtggaggagca 302
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>dbj|AK066138.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013052K11, full
           insert sequence
          Length = 1974

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 59  gctgctcctctccctcctgg 78
           ||||||||||||||||||||
Sbjct: 635 gctgctcctctccctcctgg 654
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>dbj|AK061758.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-A10, full
           insert sequence
          Length = 1843

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 59  gctgctcctctccctcctgg 78
           ||||||||||||||||||||
Sbjct: 512 gctgctcctctccctcctgg 531
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>dbj|AK060312.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-C02, full
           insert sequence
          Length = 1118

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 557 ggacgtggaggagcacgacg 576
           ||||||||||||||||||||
Sbjct: 370 ggacgtggaggagcacgacg 351
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>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome
          Length = 2595221

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 334     atcccgccgtcgacgtcgtg 353
               ||||||||||||||||||||
Sbjct: 1063579 atcccgccgtcgacgtcgtg 1063560
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>gb|U19361.1|PMU19361 Petromyzon marinus neurofilament subunit NF-180 mRNA, complete cds
          Length = 3763

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 536 ccaccaccgccaccatgagc 555
           ||||||||||||||||||||
Sbjct: 108 ccaccaccgccaccatgagc 127
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>gb|AC091494.9| Oryza sativa chromosome 3 BAC OSJNBa0070N04 genomic sequence, complete
             sequence
          Length = 150663

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 312   caccacggcctcgcccgcgt 331
             ||||||||||||||||||||
Sbjct: 99962 caccacggcctcgcccgcgt 99943
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>emb|AL596088.14| Mouse DNA sequence from clone RP23-157O10 on chromosome 11, complete
              sequence
          Length = 233204

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 525    ggcatccgcttccaccaccgccac 548
              |||||||||||||||||| |||||
Sbjct: 158413 ggcatccgcttccaccacagccac 158436


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,063,916
Number of Sequences: 3902068
Number of extensions: 4063916
Number of successful extensions: 103006
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 58
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 101493
Number of HSP's gapped (non-prelim): 1513
length of query: 582
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 559
effective length of database: 17,143,297,704
effective search space: 9583103416536
effective search space used: 9583103416536
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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