ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart48c04 |
|---|---|
| Clone Library Name | barley_pub |
>PEX14_HUMAN (O75381) Peroxisomal membrane protein PEX14 (Peroxin-14)| (Peroxisomal membrane anchor protein PEX14) (PTS1 receptor docking protein) Length = 377 Score = 58.2 bits (139), Expect = 2e-08 Identities = 36/88 (40%), Positives = 48/88 (54%) Frame = +2 Query: 209 REDYIQNAVKFLEHPKVKGSPVSYRYSFLEKKGLTKEEIDEAFRRVPDPPTNSTDAAAVG 388 RE I AVKFL++ +V+ SP++ R +FL+KKGLT EEID AF++ + AA Sbjct: 25 REPLIATAVKFLQNSRVRQSPLATRRAFLKKKGLTDEEIDMAFQQ--------SGTAADE 76 Query: 389 SQQASNPNQSAGVQPYASIQSPQAPTGS 472 Q VQP I P +P GS Sbjct: 77 PSSLGPATQVVPVQPPHLISQPYSPAGS 104
>PEX14_MOUSE (Q9R0A0) Peroxisomal membrane protein PEX14 (Peroxin-14)| (Peroxisomal membrane anchor protein PEX14) (PTS1 receptor docking protein) Length = 376 Score = 54.7 bits (130), Expect = 2e-07 Identities = 36/90 (40%), Positives = 51/90 (56%) Frame = +2 Query: 203 VAREDYIQNAVKFLEHPKVKGSPVSYRYSFLEKKGLTKEEIDEAFRRVPDPPTNSTDAAA 382 V RE I AVKFL++ +V+ SP++ R +FL+KKGLT EEID AF++ T + + + Sbjct: 23 VPREPLIATAVKFLQNSRVRQSPLATRRAFLKKKGLTDEEIDLAFQQ---SGTAADEPSP 79 Query: 383 VGSQQASNPNQSAGVQPYASIQSPQAPTGS 472 +G P VQP P +P GS Sbjct: 80 LGPATPVVP-----VQPPHLTPQPYSPRGS 104
>PEX14_PICPA (Q9HG09) Peroxisomal membrane protein PEX14 (Peroxin-14)| Length = 425 Score = 49.3 bits (116), Expect = 8e-06 Identities = 25/75 (33%), Positives = 42/75 (56%) Frame = +2 Query: 209 REDYIQNAVKFLEHPKVKGSPVSYRYSFLEKKGLTKEEIDEAFRRVPDPPTNSTDAAAVG 388 RE+ + +AV+FL++P++ SP++ + F+E KGL + E+ EA R +S+ A+ V Sbjct: 5 REEMVTSAVEFLKNPQIADSPLAKKIEFIESKGLNEAEVKEALLRSQGGNGSSSVASQVS 64 Query: 389 SQQASNPNQSAGVQP 433 S S S P Sbjct: 65 SYSPSASQSSVAPSP 79
>PEX14_PICAN (P78723) Peroxisomal membrane protein PER10 (Peroxin-14)| Length = 351 Score = 47.4 bits (111), Expect = 3e-05 Identities = 31/93 (33%), Positives = 49/93 (52%), Gaps = 2/93 (2%) Frame = +2 Query: 191 QSPQVAREDYIQNAVKFLEHPKVKGSPVSYRYSFLEKKGLTKEEIDEAFRRVPDPPTNST 370 Q +R + + +AV+FL + SP++ + FLE KGLT++EI+EA ++ Sbjct: 4 QPATTSRAELVSSAVEFLLDQSIADSPLAKKVEFLESKGLTQQEIEEALQK--------- 54 Query: 371 DAAAVGSQQASNPNQSAGVQPYASIQS--PQAP 463 A G+ QAS P+Q + V P + P AP Sbjct: 55 --ARTGTVQAS-PSQQSVVPPRPPVPDYYPSAP 84
>EVE_DROME (P06602) Segmentation protein even-skipped| Length = 376 Score = 32.7 bits (73), Expect = 0.82 Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 4/65 (6%) Frame = +2 Query: 344 VPDPP--TNSTDAAAVGSQQASNPNQSAGVQPYASIQSP--QAPTGSVATGHIVPQTQTQ 511 +P PP + AAA + A+NP + G+ P Q P Q P S GH P Q + Sbjct: 159 MPYPPYAPAAAAAAAAAAAVATNPMMATGMPPMGMPQMPTMQMPGHSGHAGHPSPYGQYR 218 Query: 512 FSWYH 526 ++ YH Sbjct: 219 YTPYH 223
>CO8A2_MOUSE (P25318) Collagen alpha-2(VIII) chain precursor (Endothelial| collagen) Length = 699 Score = 32.3 bits (72), Expect = 1.1 Identities = 23/72 (31%), Positives = 26/72 (36%), Gaps = 3/72 (4%) Frame = -3 Query: 380 PQHPYCLSADQEPDGRPRRFPPL*ALSSPGKSTCRTPE---SPSPLDARGT*RRSVCNPP 210 P P L + P G+P P PGK P P P G R PP Sbjct: 65 PMLPMDLKGEPGPPGKPGPRGPPGPPGFPGKPGTGKPGVHGQPGPAGPPGFSRMGKAGPP 124 Query: 209 VLPAGIGIPGFP 174 LP +G PG P Sbjct: 125 GLPGKVGPPGQP 136
>FARP2_HUMAN (O94887) FERM, RhoGEF and pleckstrin domain-containing protein 2| (FERM domain including RhoGEF) (FIR) Length = 1054 Score = 31.6 bits (70), Expect = 1.8 Identities = 25/95 (26%), Positives = 41/95 (43%), Gaps = 6/95 (6%) Frame = +2 Query: 236 KFLEHPKVKGSPV------SYRYSFLEKKGLTKEEIDEAFRRVPDPPTNSTDAAAVGSQQ 397 + L+ PK K V S+RYS +K L D +R+P +S +V + Sbjct: 321 RLLDQPKPKAKAVFFSRGSSFRYSGRTQKQLVDYFKDSGMKRIPYERRHSKTHTSVRALT 380 Query: 398 ASNPNQSAGVQPYASIQSPQAPTGSVATGHIVPQT 502 A P QS +++P +P+ + A + P T Sbjct: 381 ADLPKQSISFP--EGLRTPASPSSANAFYSLSPST 413
>CO8A2_HUMAN (P25067) Collagen alpha-2(VIII) chain precursor (Endothelial| collagen) Length = 703 Score = 31.6 bits (70), Expect = 1.8 Identities = 23/72 (31%), Positives = 26/72 (36%), Gaps = 3/72 (4%) Frame = -3 Query: 380 PQHPYCLSADQEPDGRPRRFPPL*ALSSPGKSTCRTPE---SPSPLDARGT*RRSVCNPP 210 P P L + P G+P P PGK P P P G R PP Sbjct: 69 PLLPMDLKGEPGPPGKPGPRGPPGPPGFPGKPGMGKPGLHGQPGPAGPPGFSRMGKAGPP 128 Query: 209 VLPAGIGIPGFP 174 LP +G PG P Sbjct: 129 GLPGKVGPPGQP 140
>FTSK_SHIFL (Q83S00) DNA translocase ftsK| Length = 1342 Score = 31.6 bits (70), Expect = 1.8 Identities = 27/123 (21%), Positives = 48/123 (39%), Gaps = 5/123 (4%) Frame = +2 Query: 128 PPMAAQQDXXXXXXXXENLVFQSPQVAREDYIQNAVKFLEHPKVKGSPVSYRYSFLEKKG 307 P Q + + ++Q PQ + + +E K P+ Y EK+ Sbjct: 445 PQSTYQTEQTYQQPAAQEPLYQQPQPVEQQPVVEPEPVVEETKPARPPLYYFEEVEEKRA 504 Query: 308 LTKEEIDEAFRRVPDP---PTNSTDAAAVGSQQASNP-NQSAGVQPYAS-IQSPQAPTGS 472 +E++ ++ +P+P P + S A P +A V P AS ++ TG+ Sbjct: 505 REREQLAAWYQPIPEPVKEPEPIKSSLKAPSVAAVPPVEAAAAVSPLASGVKKATLATGA 564 Query: 473 VAT 481 AT Sbjct: 565 AAT 567
>FTSK_ECO57 (Q8X5H9) DNA translocase ftsK| Length = 1342 Score = 31.6 bits (70), Expect = 1.8 Identities = 27/123 (21%), Positives = 48/123 (39%), Gaps = 5/123 (4%) Frame = +2 Query: 128 PPMAAQQDXXXXXXXXENLVFQSPQVAREDYIQNAVKFLEHPKVKGSPVSYRYSFLEKKG 307 P Q + + ++Q PQ + + +E K P+ Y EK+ Sbjct: 445 PQSTYQTEQTYQQPAAQEPLYQQPQPVEQQPVVEPEPVVEETKPARPPLYYFEEVEEKRA 504 Query: 308 LTKEEIDEAFRRVPDP---PTNSTDAAAVGSQQASNP-NQSAGVQPYAS-IQSPQAPTGS 472 +E++ ++ +P+P P + S A P +A V P AS ++ TG+ Sbjct: 505 REREQLAAWYQPIPEPVKEPEPIKSSLKAPSVAAVPPVEAAAAVSPLASGVKKATLATGA 564 Query: 473 VAT 481 AT Sbjct: 565 AAT 567
>FTSK_ECOLI (P46889) DNA translocase ftsK| Length = 1329 Score = 31.6 bits (70), Expect = 1.8 Identities = 27/123 (21%), Positives = 48/123 (39%), Gaps = 5/123 (4%) Frame = +2 Query: 128 PPMAAQQDXXXXXXXXENLVFQSPQVAREDYIQNAVKFLEHPKVKGSPVSYRYSFLEKKG 307 P Q + + ++Q PQ + + +E K P+ Y EK+ Sbjct: 445 PQSTYQTEQTYQQPAAQEPLYQQPQPVEQQPVVEPEPVVEETKPARPPLYYFEEVEEKRA 504 Query: 308 LTKEEIDEAFRRVPDP---PTNSTDAAAVGSQQASNP-NQSAGVQPYAS-IQSPQAPTGS 472 +E++ ++ +P+P P + S A P +A V P AS ++ TG+ Sbjct: 505 REREQLAAWYQPIPEPVKEPEPIKSSLKAPSVAAVPPVEAAAAVSPLASGVKKATLATGA 564 Query: 473 VAT 481 AT Sbjct: 565 AAT 567
>FTSK_ECOL6 (Q8FJC7) DNA translocase ftsK| Length = 1347 Score = 31.6 bits (70), Expect = 1.8 Identities = 27/123 (21%), Positives = 48/123 (39%), Gaps = 5/123 (4%) Frame = +2 Query: 128 PPMAAQQDXXXXXXXXENLVFQSPQVAREDYIQNAVKFLEHPKVKGSPVSYRYSFLEKKG 307 P Q + + ++Q PQ + + +E K P+ Y EK+ Sbjct: 458 PQSTYQTEQTYQQPAAQEPLYQQPQPVEQQPVVEPEPVVEETKPTRPPLYYFEEVEEKRA 517 Query: 308 LTKEEIDEAFRRVPDP---PTNSTDAAAVGSQQASNP-NQSAGVQPYAS-IQSPQAPTGS 472 +E++ ++ +P+P P + S A P +A V P AS ++ TG+ Sbjct: 518 REREQLAAWYQPIPEPVKEPEPIKSSLKAPSVAAVPPVEAAAAVSPLASGVKKATLATGA 577 Query: 473 VAT 481 AT Sbjct: 578 AAT 580
>CAPP3_SORBI (P15804) Phosphoenolpyruvate carboxylase 3 (EC 4.1.1.31) (PEPCase 3)| (PEPC 3) (CP46) Length = 960 Score = 30.8 bits (68), Expect = 3.1 Identities = 35/138 (25%), Positives = 52/138 (37%) Frame = +2 Query: 176 ENLVFQSPQVAREDYIQNAVKFLEHPKVKGSPVSYRYSFLEKKGLTKEEIDEAFRRVPDP 355 ENL FQS Q +++ + HP V P +R E + EE + P Sbjct: 675 ENLCFQSLQRFTAATLEHGM----HPPVSPKP-EWRKLMEEMAVVATEEYRSVVVKEP-- 727 Query: 356 PTNSTDAAAVGSQQASNPNQSAGVQPYASIQSPQAPTGSVATGHIVPQTQTQFSWYHTLL 535 V +++ P G S + + P G + T +P FSW T Sbjct: 728 -------RFVEYFRSATPETEYGKMNIGSRPAKRRPGGGITTLRAIPWI---FSWTQTRF 777 Query: 536 GAGIFLGVGASSVLIIKK 589 ++LGVGA+ I K Sbjct: 778 HLPVWLGVGAAFKWAIDK 795
>LIN36_CAEEL (P34427) Protein lin-36 (Abnormal cell lineage protein 36)| Length = 962 Score = 30.8 bits (68), Expect = 3.1 Identities = 29/113 (25%), Positives = 49/113 (43%), Gaps = 15/113 (13%) Frame = +2 Query: 179 NLVFQSPQVAREDYIQNAVKFLE--HPKVKGSPVSYRYSFLEKKGLT--------KEEID 328 N + +P ++ Y+QN + + H + K SF+ K+G T + ++ Sbjct: 381 NEIVLTPSPTKKAYVQNPEERTKMVHDEEKRKKAVRTLSFVGKEGGTSVNDLNVMQRQVF 440 Query: 329 EAFRRVPDPPTNSTDAAAVGSQQASNPNQSA-----GVQPYASIQSPQAPTGS 472 RR + T + ++A +Q S+ + A V S QSPQAP GS Sbjct: 441 LQLRREAEINTKAEESAQGTKEQESSQKKHAEEESDDVSELTSHQSPQAPMGS 493
>NCOR1_HUMAN (O75376) Nuclear receptor corepressor 1 (N-CoR1) (N-CoR)| Length = 2440 Score = 30.8 bits (68), Expect = 3.1 Identities = 34/119 (28%), Positives = 46/119 (38%), Gaps = 21/119 (17%) Frame = -3 Query: 434 KAAPRQIDLDCLLVANRQPQHPYC-------LSADQEPDGRPRR---FP----PL*ALSS 297 K PR DL N Q P SAD++ DG P R FP P L+ Sbjct: 852 KVEPRDEDLVVAQQINAQRPEPQSDNDSSATCSADEDVDGEPERQRMFPMDSKPS-LLNP 910 Query: 296 PGKSTCRTPESPSPLDARGT*RRSVCNPPV-------LPAGIGIPGFPRILLRRNHLAA 141 G +P P+PLD R+ PP+ +P G + G+ L + H+ A Sbjct: 911 TGSILVSSPLKPNPLDLPQLQHRAAVIPPMVSCTPCNIPIGTPVSGY---ALYQRHIKA 966
>G3PB_ARATH (P25857) Glyceraldehyde-3-phosphate dehydrogenase B, chloroplast| precursor (EC 1.2.1.13) (NADP-dependent glyceraldehydephosphate dehydrogenase subunit B) Length = 447 Score = 30.8 bits (68), Expect = 3.1 Identities = 12/22 (54%), Positives = 18/22 (81%) Frame = +2 Query: 293 LEKKGLTKEEIDEAFRRVPDPP 358 +EKKGLT E+++EAFR+ + P Sbjct: 331 VEKKGLTAEDVNEAFRKAANGP 352
>RGT2_YEAST (Q12300) High-affinity glucose transporter RGT2| Length = 763 Score = 30.4 bits (67), Expect = 4.1 Identities = 13/28 (46%), Positives = 19/28 (67%) Frame = +2 Query: 284 YSFLEKKGLTKEEIDEAFRRVPDPPTNS 367 ++ E +GLT EEIDE FR+ P+ +S Sbjct: 542 FAVYETRGLTLEEIDELFRKAPNSVISS 569
>CO4A1_MOUSE (P02463) Collagen alpha-1(IV) chain precursor| Length = 1669 Score = 30.4 bits (67), Expect = 4.1 Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 4/59 (6%) Frame = +1 Query: 175 GKPGIPIPAGSTGGL----HTERRQVPRASKGEGLSGVLQVLFPGEERAHKGGNRRGLP 339 G PG+P P GS GG+ + VP +G+ G PGE+ A + GLP Sbjct: 1002 GSPGLPGPKGSVGGMGLPGSPGEKGVPGIPGSQGVPG-----SPGEKGAKGEKGQSGLP 1055
>IF4G3_HUMAN (O43432) Eukaryotic translation initiation factor 4 gamma 3| (eIF-4-gamma 3) (eIF-4G 3) (eIF4G 3) (eIF-4-gamma II) (eIF4GII) Length = 1585 Score = 30.4 bits (67), Expect = 4.1 Identities = 23/83 (27%), Positives = 37/83 (44%), Gaps = 4/83 (4%) Frame = +2 Query: 308 LTKEEIDEAFRRVPDPPTNSTDAAAVGSQQASNP----NQSAGVQPYASIQSPQAPTGSV 475 +TK IDE + VP S + G +AS + ++ + ++++Q P AP+GS Sbjct: 1055 ITKPTIDEKIQLVPKAQLGSWGKGSSGGAKASETDALRSSASSLNRFSALQ-PPAPSGS- 1112 Query: 476 ATGHIVPQTQTQFSWYHTLLGAG 544 P T +F TL G Sbjct: 1113 -----TPSTPVEFDSRRTLTSRG 1130
>MIS_PIG (P79295) Muellerian-inhibiting factor precursor (MIS)| (Anti-Muellerian hormone) (AMH) (Mullerian-inhibiting substance) Length = 575 Score = 30.4 bits (67), Expect = 4.1 Identities = 21/79 (26%), Positives = 33/79 (41%) Frame = -1 Query: 478 GDRASWCLWRLNGCVRLHPGRLIWIACLLRTDSRSIRTVCRRIRNPTEGLVDFLLCEPFL 299 G + CL LNG +W+ L + ++ R R + L +F LC P L Sbjct: 62 GPQDPLCLVTLNGTPGNGSSPFLWVVGTLSSYEQAFLEAVRHARWGPQDLANFGLCPPSL 121 Query: 298 LQERVPVGHRRALHLWMLE 242 Q +P+ + L W+ E Sbjct: 122 RQAALPL--LQQLQAWLGE 138
>PHC1_MOUSE (Q64028) Polyhomeotic-like protein 1 (mPH1) (Early development| regulatory protein 1) (RAE-28) Length = 1012 Score = 30.4 bits (67), Expect = 4.1 Identities = 28/140 (20%), Positives = 59/140 (42%), Gaps = 1/140 (0%) Frame = +2 Query: 140 AQQDXXXXXXXXENLVFQSPQVARED-YIQNAVKFLEHPKVKGSPVSYRYSFLEKKGLTK 316 ++Q+ + PQ+A+ Y + AV+ L+ + + + Y + F+ ++ L+ Sbjct: 5 SEQNSSSTNGSSSSGASSRPQIAQMSLYERQAVQALQALQRQPNAAQYFHQFMLQQQLSN 64 Query: 317 EEIDEAFRRVPDPPTNSTDAAAVGSQQASNPNQSAGVQPYASIQSPQAPTGSVATGHIVP 496 ++ A S+QAS+PN S Q A+ Q+ + + ++ Sbjct: 65 AQLHSL--------AAVQQATIAASRQASSPNSSTAQQQTATTQA-SMNLATTSAAQLIS 115 Query: 497 QTQTQFSWYHTLLGAGIFLG 556 ++Q+ S T L + LG Sbjct: 116 RSQSVSSPSATTLTQSVLLG 135
>SIF2_DROME (P91620) Protein still life, isoforms C/SIF type 2| Length = 2061 Score = 30.4 bits (67), Expect = 4.1 Identities = 15/40 (37%), Positives = 23/40 (57%) Frame = +3 Query: 264 ALRCPTGTLSWRRKGSQRRKSTRPSVGFLIRRQTVRMLRL 383 ALR P L W + +Q+R S R + G +R +T+ L+L Sbjct: 49 ALRQPPEQLEWFDRRAQQRHSARSAEGGQVREETMEWLKL 88
>ZAN_MOUSE (O88799) Zonadhesin precursor| Length = 5376 Score = 30.0 bits (66), Expect = 5.3 Identities = 17/62 (27%), Positives = 28/62 (45%) Frame = +2 Query: 344 VPDPPTNSTDAAAVGSQQASNPNQSAGVQPYASIQSPQAPTGSVATGHIVPQTQTQFSWY 523 VP T ST+ V ++ + P + P I++ +PTG + VP T+ + Sbjct: 733 VPTEETISTEVTTVSPEETTVPTEV----PIVLIEATASPTGEITLYTEVPTVPTEVTGV 788 Query: 524 HT 529 HT Sbjct: 789 HT 790
>UXAA_BACSU (O34673) Altronate hydrolase (EC 4.2.1.7) (Altronic acid hydratase)| Length = 497 Score = 30.0 bits (66), Expect = 5.3 Identities = 23/91 (25%), Positives = 32/91 (35%) Frame = +1 Query: 190 PIPAGSTGGLHTERRQVPRASKGEGLSGVLQVLFPGEERAHKGGNRRGLPSGS*SADKQY 369 P P GG+ T + ++ G+S V VL GE KG P A Sbjct: 344 PSPGNKAGGISTLEDKSLGCTQKAGISPVTDVLKYGEVLKTKGLTLLSAPGNDLIASSAL 403 Query: 370 GCCGCRFATSKQSKSICRGAALRIHSVATST 462 GC+ + G + VAT+T Sbjct: 404 AAAGCQIVLFTTGRGTPFGTFVPTVKVATNT 434
>DRP2_HUMAN (Q13474) Dystrophin-related protein 2| Length = 954 Score = 30.0 bits (66), Expect = 5.3 Identities = 13/27 (48%), Positives = 16/27 (59%) Frame = +2 Query: 353 PPTNSTDAAAVGSQQASNPNQSAGVQP 433 PPT S + + GS AS+P QS G P Sbjct: 874 PPTESDGSGSAGSSLASSPQQSEGSHP 900
>ZDHC8_MOUSE (Q5Y5T5) Probable palmitoyltransferase ZDHHC8 (EC 2.3.1.-) (Zinc| finger DHHC domain-containing protein 8) (DHHC-8) Length = 762 Score = 30.0 bits (66), Expect = 5.3 Identities = 23/72 (31%), Positives = 31/72 (43%), Gaps = 6/72 (8%) Frame = +2 Query: 347 PDPPTNSTDA--AAVGSQQASNPNQSAG----VQPYASIQSPQAPTGSVATGHIVPQTQT 508 P PP N+TDA A+ S ++ G +QP S P P S+ H +P Sbjct: 414 PSPPLNTTDAFSGALRSLSLKAASRRGGDHMTLQPLRSEGGPPTPHRSLFAPHALPNRNG 473 Query: 509 QFSWYHTLLGAG 544 S Y +LL G Sbjct: 474 SLS-YDSLLNPG 484
>MAGD1_PIG (Q6ITT4) Melanoma-associated antigen D1 (MAGE-D1 antigen)| Length = 784 Score = 29.6 bits (65), Expect = 6.9 Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 6/61 (9%) Frame = +2 Query: 293 LEKKGLTKEEIDEAFRRVPDPPTNSTDAAAVG---SQQASNP---NQSAGVQPYASIQSP 454 +E L + + EA + PPTN AAA G S Q+S P N+ A +Q A+ P Sbjct: 20 VEDSTLLMQTLMEAIQISEAPPTNQATAAASGPNASPQSSQPPSANEVADIQALAAATKP 79 Query: 455 Q 457 + Sbjct: 80 K 80
>MSX1_LEPED (Q2VL77) Homeobox protein MSX-1 (Msh homeobox 1-like protein)| Length = 297 Score = 29.6 bits (65), Expect = 6.9 Identities = 16/38 (42%), Positives = 22/38 (57%) Frame = +2 Query: 374 AAAVGSQQASNPNQSAGVQPYASIQSPQAPTGSVATGH 487 AA+ G+Q A QS GV+P S+ +P AP+ GH Sbjct: 75 AASEGAQAAGGSAQSLGVRP-GSLGAPDAPSSPRPLGH 111
>XKR7_RAT (Q5GH56) XK-related protein 7| Length = 580 Score = 29.6 bits (65), Expect = 6.9 Identities = 26/80 (32%), Positives = 33/80 (41%), Gaps = 3/80 (3%) Frame = -3 Query: 404 CLLVANRQ---PQHPYCLSADQEPDGRPRRFPPL*ALSSPGKSTCRTPESPSPLDARGT* 234 CLL N PQ P C+ P+ PP A++SP +S RT + A G Sbjct: 437 CLLHPNGPMLGPQAPGCIF----PEAPGPCGPPADAITSPPRSLPRTTGAERDGAAVGGE 492 Query: 233 RRSVCNPPVLPAGIGIPGFP 174 R PPV G+P P Sbjct: 493 RAGTPTPPVFQVRPGLPPTP 512
>IRBP_MOUSE (P49194) Interphotoreceptor retinoid-binding protein precursor| (IRBP) (Interstitial retinol-binding protein) Length = 1234 Score = 29.6 bits (65), Expect = 6.9 Identities = 17/44 (38%), Positives = 21/44 (47%) Frame = -3 Query: 302 SSPGKSTCRTPESPSPLDARGT*RRSVCNPPVLPAGIGIPGFPR 171 + P +S TPE P+ DAR SV VLP +G F R Sbjct: 401 TGPNESPAATPEVPTEEDARRALVDSVFQVSVLPGNVGYLRFDR 444
>CAPP_ECOLI (P00864) Phosphoenolpyruvate carboxylase (EC 4.1.1.31) (PEPCase)| (PEPC) Length = 883 Score = 29.6 bits (65), Expect = 6.9 Identities = 31/123 (25%), Positives = 51/123 (41%), Gaps = 11/123 (8%) Frame = +2 Query: 251 PKVKGSPVS-YRYSFLEKKGLTKEEIDEAFRRVPDP-PTNSTDAAA---------VGSQQ 397 P++ S +S Y + LE L E E++RR+ D S D V + Sbjct: 624 PEITVSSLSLYTGAILEANLLPPPEPKESWRRIMDELSVISCDVYRGYVRENKDFVPYFR 683 Query: 398 ASNPNQSAGVQPYASIQSPQAPTGSVATGHIVPQTQTQFSWYHTLLGAGIFLGVGASSVL 577 ++ P Q G P S + + PTG V + +P F+W L +LG G + Sbjct: 684 SATPEQELGKLPLGSRPAKRRPTGGVESLRAIPWI---FAWTQNRLMLPAWLGAGTALQK 740 Query: 578 IIK 586 +++ Sbjct: 741 VVE 743
>RAB4A_ECHMU (Q9GP33) Probable Ras-related protein Rab-4A| Length = 223 Score = 29.3 bits (64), Expect = 9.1 Identities = 21/69 (30%), Positives = 28/69 (40%), Gaps = 3/69 (4%) Frame = +2 Query: 290 FLEKKGLTKEEIDEAFRRVPDPPTNSTDAAAVGSQQ---ASNPNQSAGVQPYASIQSPQA 460 F+E LT E ID+AF + + +G+ + SN V AS S A Sbjct: 149 FIETSALTGENIDDAFTSCVRVLLSKVKSGELGADRLLVGSNKQHLQAVNLTASATSVSA 208 Query: 461 PTGSVATGH 487 S AT H Sbjct: 209 SQSSAATAH 217
>RREB1_HUMAN (Q92766) RAS-responsive element-binding protein 1 (RREB-1)| (Raf-responsive zinc finger protein LZ321) Length = 755 Score = 29.3 bits (64), Expect = 9.1 Identities = 20/60 (33%), Positives = 26/60 (43%) Frame = +1 Query: 205 STGGLHTERRQVPRASKGEGLSGVLQVLFPGEERAHKGGNRRGLPSGS*SADKQYGCCGC 384 STG R +V + G GL L G GG RRG P G+ S +++ C C Sbjct: 413 STGDADGGRGRVEQPEPGPGLRHQAHGLQAG------GGRRRGRPGGAASQEQKLACDTC 466
>CUF2_SCHPO (O94588) Copper-binding regulatory protein cuf2 (Copper homeostasis| protein) Length = 177 Score = 29.3 bits (64), Expect = 9.1 Identities = 13/26 (50%), Positives = 16/26 (61%) Frame = -1 Query: 181 VFRGSSSAGTILLRGHRGSSRPHQPR 104 + G + A + LRGHRGSS HQ R Sbjct: 3 IIDGKNYACVVCLRGHRGSSCQHQER 28
>STAP2_MOUSE (Q8R0L1) Signal-transducing adaptor protein 2 (STAP-2)| Length = 411 Score = 29.3 bits (64), Expect = 9.1 Identities = 14/20 (70%), Positives = 17/20 (85%), Gaps = 1/20 (5%) Frame = +2 Query: 251 PKVKGSPVSYRY-SFLEKKG 307 PK+KG+P S+ Y SFLEKKG Sbjct: 11 PKLKGAPPSHYYESFLEKKG 30
>CAPP_SHIFL (Q83IS7) Phosphoenolpyruvate carboxylase (EC 4.1.1.31) (PEPCase)| (PEPC) Length = 883 Score = 29.3 bits (64), Expect = 9.1 Identities = 29/123 (23%), Positives = 52/123 (42%), Gaps = 11/123 (8%) Frame = +2 Query: 251 PKVKGSPVS-YRYSFLEKKGLTKEEIDEAFRRVPDPPTNST----------DAAAVGSQQ 397 P++ S +S Y + LE L E E++RR+ D + + + V + Sbjct: 624 PEITVSSLSLYTGAILEANLLPPPEPKESWRRIMDELSVISCDLYRGYVRENKDFVPYFR 683 Query: 398 ASNPNQSAGVQPYASIQSPQAPTGSVATGHIVPQTQTQFSWYHTLLGAGIFLGVGASSVL 577 ++ P Q G P S + + PTG V + +P F+W L +LG G + Sbjct: 684 SATPEQELGKLPLGSRPAKRRPTGGVESLRAIPWI---FAWTQNRLMLPAWLGAGTALQK 740 Query: 578 IIK 586 +++ Sbjct: 741 VVE 743
>CAPP_ECOL6 (Q8FB98) Phosphoenolpyruvate carboxylase (EC 4.1.1.31) (PEPCase)| (PEPC) Length = 883 Score = 29.3 bits (64), Expect = 9.1 Identities = 29/123 (23%), Positives = 52/123 (42%), Gaps = 11/123 (8%) Frame = +2 Query: 251 PKVKGSPVS-YRYSFLEKKGLTKEEIDEAFRRVPDPPTNST----------DAAAVGSQQ 397 P++ S +S Y + LE L E E++RR+ D + + + V + Sbjct: 624 PEITVSSLSLYTGAILEANLLPPPEPKESWRRIMDELSVISCDLYRGYVRENKDFVPYFR 683 Query: 398 ASNPNQSAGVQPYASIQSPQAPTGSVATGHIVPQTQTQFSWYHTLLGAGIFLGVGASSVL 577 ++ P Q G P S + + PTG V + +P F+W L +LG G + Sbjct: 684 SATPEQELGKLPLGSRPAKRRPTGGVESLRAIPWI---FAWTQNRLMLPAWLGAGTALQK 740 Query: 578 IIK 586 +++ Sbjct: 741 VVE 743
>CAPP_ECO57 (Q8X743) Phosphoenolpyruvate carboxylase (EC 4.1.1.31) (PEPCase)| (PEPC) Length = 883 Score = 29.3 bits (64), Expect = 9.1 Identities = 29/123 (23%), Positives = 52/123 (42%), Gaps = 11/123 (8%) Frame = +2 Query: 251 PKVKGSPVS-YRYSFLEKKGLTKEEIDEAFRRVPDPPTNST----------DAAAVGSQQ 397 P++ S +S Y + LE L E E++RR+ D + + + V + Sbjct: 624 PEITVSSLSLYTGAILEANLLPPPEPKESWRRIMDELSVISCDLYRGYVRENKDFVPYFR 683 Query: 398 ASNPNQSAGVQPYASIQSPQAPTGSVATGHIVPQTQTQFSWYHTLLGAGIFLGVGASSVL 577 ++ P Q G P S + + PTG V + +P F+W L +LG G + Sbjct: 684 SATPEQELGKLPLGSRPAKRRPTGGVESLRAIPWI---FAWTQNRLMLPAWLGAGTALQK 740 Query: 578 IIK 586 +++ Sbjct: 741 VVE 743 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 88,757,029 Number of Sequences: 219361 Number of extensions: 2091628 Number of successful extensions: 7479 Number of sequences better than 10.0: 38 Number of HSP's better than 10.0 without gapping: 6688 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 7454 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5253413348 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
