ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart48c01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_450259.1| Oryza sativa (japonica cultivar-group), mRNA 525 e-146
2dbj|AK106209.1| Oryza sativa (japonica cultivar-group) cDNA clon... 517 e-143
3ref|XM_450260.1| Oryza sativa (japonica cultivar-group), mRNA 513 e-142
4dbj|AK120327.1| Oryza sativa (japonica cultivar-group) cDNA clon... 513 e-142
5dbj|AK065068.1| Oryza sativa (japonica cultivar-group) cDNA clon... 513 e-142
6dbj|AK100378.1| Oryza sativa (japonica cultivar-group) cDNA clon... 313 3e-82
7dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 220 4e-54
8dbj|AP005571.3| Oryza sativa (japonica cultivar-group) genomic D... 220 4e-54
9dbj|AP005587.3| Oryza sativa (japonica cultivar-group) genomic D... 220 4e-54
10ref|XM_481756.1| Oryza sativa (japonica cultivar-group), mRNA 72 2e-09
11dbj|AK073244.1| Oryza sativa (japonica cultivar-group) cDNA clon... 72 2e-09
12dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 64 5e-07
13dbj|AP005491.3| Oryza sativa (japonica cultivar-group) genomic D... 64 5e-07
14dbj|AP004574.3| Oryza sativa (japonica cultivar-group) genomic D... 64 5e-07
15ref|NM_126426.3| Arabidopsis thaliana GEK1 (GEKO1) AT2G03800 (GE... 48 0.032
16gb|AC133459.9| Mus musculus chromosome 12, clone RP23-383O15, co... 48 0.032
17gb|AC006836.7| Arabidopsis thaliana chromosome 2 clone F19B11 ma... 48 0.032
18emb|BX821728.1|CNS0A88A Arabidopsis thaliana Full-length cDNA Co... 48 0.032
19emb|BX821698.1|CNS0A86Q Arabidopsis thaliana Full-length cDNA Co... 48 0.032
20gb|BT022079.1| Arabidopsis thaliana unknown protein (At2g03800) ... 48 0.032
21dbj|AB091252.1| Arabidopsis thaliana GEK1 mRNA for GEKO1, comple... 48 0.032
22gb|AC140376.3| Mus musculus BAC clone RP24-78P21 from 12, comple... 48 0.032
23ref|NM_001007500.1| Xenopus tropicalis irak2 protein (irak2), mRNA 44 0.50
24gb|BC079937.1| Xenopus tropicalis irak2 protein, mRNA (cDNA clon... 44 0.50
25gb|AC006582.13|AC006582 Pan troglodytes 12cp12 BAC RPCI43-77C18 ... 44 0.50
26gb|AC011604.10| Homo sapiens 12p12-31.7-37.2 BAC RP11-80N2 (Rosw... 44 0.50
27emb|AL773532.5| Mouse DNA sequence from clone RP23-48F16 on chro... 42 2.0
28gb|AC097382.3| Homo sapiens BAC clone RP11-367J11 from 4, comple... 42 2.0
29gb|AC110807.3| Homo sapiens BAC clone RP11-745F5 from 2, complet... 42 2.0
30gb|AC104772.3| Homo sapiens BAC clone RP11-3I22 from 2, complete... 42 2.0
31emb|AL808143.5| Mouse DNA sequence from clone RP23-384K11 on chr... 42 2.0
32gb|AC121281.19| Mus musculus chromosome 3, clone RP23-61G16, com... 40 7.8
33gb|AC102841.7| Mus musculus chromosome 7, clone RP24-371C6, comp... 40 7.8
34gb|AC130529.2| Mus musculus BAC clone RP23-124O11 from chromosom... 40 7.8
35gb|AC156987.7| Mus musculus chromosome 7, clone RP23-78K13, comp... 40 7.8
36gb|AC121546.13| Mus musculus chromosome 6, clone RP24-537N12, co... 40 7.8
37gb|AC130821.3| Mus musculus BAC clone RP23-205K12 from chromosom... 40 7.8
38ref|XM_548372.2| PREDICTED: Canis familiaris similar to small nu... 40 7.8
39gb|AC123043.2| Mus musculus BAC clone RP24-547G7 from 13, comple... 40 7.8
40emb|AL662858.15| Mouse DNA sequence from clone RP23-166O21 on ch... 40 7.8
41gb|AC112221.2| Homo sapiens chromosome 3 clone RP11-11C8, comple... 40 7.8
42gb|AC115014.6| Mus musculus chromosome 3, clone RP24-196G4, comp... 40 7.8
43dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.8
44dbj|AP005452.5| Oryza sativa (japonica cultivar-group) genomic D... 40 7.8
45emb|Z22577.1|SAGLCTRAA S.antibioticus membrane protein, lipoprot... 40 7.8
46gb|AY104706.1| Zea mays PCO076122 mRNA sequence 40 7.8
47gb|AC163763.3| Pan troglodytes BAC clone CH251-180G5 from chromo... 40 7.8
48gb|AC154677.2| Mus musculus BAC clone RP24-299I4 from chromosome... 40 7.8
49gb|AC142502.3| Mus musculus BAC clone RP24-530L11 from 3, comple... 40 7.8
50emb|AL807795.7| Mouse DNA sequence from clone RP23-199A9 on chro... 40 7.8
51gb|AC135851.1| Homo sapiens chromosome 3 clone RP11-152N21, comp... 40 7.8 
>ref|XM_450259.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1411

 Score =  525 bits (265), Expect = e-146
 Identities = 426/482 (88%)
 Strand = Plus / Plus

                                                                       
Query: 82  gcgacggcgtccgacccggcgtccatcggccccgccgccgcgttcctggccatgcctggc 141
           ||||||||||| ||||||||||| |||||||| |||||||| ||||| |||||||| |||
Sbjct: 93  gcgacggcgtcggacccggcgtctatcggcccagccgccgccttcctcgccatgcccggc 152

                                                                       
Query: 142 tggtcccccggcccgcccatcccggaggggatggagagctttacaaatgggaatgttagg 201
           ||||| ||||||||||||||||| ||||||||||||||||||||||| ||| | ||| | 
Sbjct: 153 tggtctcccggcccgcccatccccgaggggatggagagctttacaaacggggacgttcga 212

                                                                       
Query: 202 ttattgaagcatgaacgcagcattgttgcagaggatgatcttgaccgtcggtggcaggaa 261
            ||||||||||||||||||||||  |||| |||||||||||||||   |||||||||| |
Sbjct: 213 ctattgaagcatgaacgcagcatcattgcggaggatgatcttgacaaccggtggcaggca 272

                                                                       
Query: 262 gccactggagaggctgtttccgaggtcatattcctcagcaaacacactgcagtctccaat 321
           |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| 
Sbjct: 273 gccactggagaggctgtttctgaggtcatattcctcagcaaacacactgctgtctccaac 332

                                                                       
Query: 322 cgccctgcactcactgtccatccaatcggtgtgccacatctgagggaggatgagannnnn 381
           || ||||| || ||||||||||||||||||||||||||||| || || |||||||     
Sbjct: 333 cgtcctgcgcttactgtccatccaatcggtgtgccacatctaagagaagatgagacgcca 392

                                                                       
Query: 382 nntcaaggagggaggcctggatgggcagcggtgccaaaccctcgaattggcccatggtta 441
             |||||||||||| || |||||||||||  |||| || ||||||||||| |||||| | 
Sbjct: 393 cctcaaggagggagaccaggatgggcagctctgcccaatcctcgaattggtccatggctc 452

                                                                       
Query: 442 cggttgatgcaaaaggttgctgcagaccaaggtcttgttccagagttcgagattacactt 501
           || |||||||||||| |||| | |||||||||||||||||||||||| ||||||||||| 
Sbjct: 453 cgtttgatgcaaaagattgcggtagaccaaggtcttgttccagagtttgagattacactg 512

                                                                       
Query: 502 gaagctactcaccatggaccacttaccagtacacccacgatgtttgttgagataggaagt 561
           ||||||||||||||||||||| | |||| |||||| ||||||||||||||||||||||||
Sbjct: 513 gaagctactcaccatggaccagtcaccaatacaccaacgatgtttgttgagataggaagt 572

             
Query: 562 ac 563
           ||
Sbjct: 573 ac 574
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>dbj|AK106209.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-208-G05, full
           insert sequence
          Length = 1411

 Score =  517 bits (261), Expect = e-143
 Identities = 425/482 (88%)
 Strand = Plus / Plus

                                                                       
Query: 82  gcgacggcgtccgacccggcgtccatcggccccgccgccgcgttcctggccatgcctggc 141
           ||||||||||| ||||||||||| |||||||| |||||||| ||||| |||||||| |||
Sbjct: 93  gcgacggcgtcggacccggcgtctatcggcccagccgccgccttcctcgccatgcccggc 152

                                                                       
Query: 142 tggtcccccggcccgcccatcccggaggggatggagagctttacaaatgggaatgttagg 201
           ||||| ||||||||||||||||| ||||||||||||||||||||||| ||| | ||| | 
Sbjct: 153 tggtctcccggcccgcccatccccgaggggatggagagctttacaaacggggacgttcga 212

                                                                       
Query: 202 ttattgaagcatgaacgcagcattgttgcagaggatgatcttgaccgtcggtggcaggaa 261
            ||||||||||||||||||||||  |||| |||||||||||||||   |||||| ||| |
Sbjct: 213 ctattgaagcatgaacgcagcatcattgcggaggatgatcttgacaaccggtggaaggca 272

                                                                       
Query: 262 gccactggagaggctgtttccgaggtcatattcctcagcaaacacactgcagtctccaat 321
           |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| 
Sbjct: 273 gccactggagaggctgtttctgaggtcatattcctcagcaaacacactgctgtctccaac 332

                                                                       
Query: 322 cgccctgcactcactgtccatccaatcggtgtgccacatctgagggaggatgagannnnn 381
           || ||||| || ||||||||||||||||||||||||||||| || || |||||||     
Sbjct: 333 cgtcctgcgcttactgtccatccaatcggtgtgccacatctaagagaagatgagacgcca 392

                                                                       
Query: 382 nntcaaggagggaggcctggatgggcagcggtgccaaaccctcgaattggcccatggtta 441
             |||||||||||| || |||||||||||  |||| || ||||||||||| |||||| | 
Sbjct: 393 cctcaaggagggagaccaggatgggcagctctgcccaatcctcgaattggtccatggctc 452

                                                                       
Query: 442 cggttgatgcaaaaggttgctgcagaccaaggtcttgttccagagttcgagattacactt 501
           || |||||||||||| |||| | |||||||||||||||||||||||| ||||||||||| 
Sbjct: 453 cgtttgatgcaaaagattgcggtagaccaaggtcttgttccagagtttgagattacactg 512

                                                                       
Query: 502 gaagctactcaccatggaccacttaccagtacacccacgatgtttgttgagataggaagt 561
           ||||||||||||||||||||| | |||| |||||| ||||||||||||||||||||||||
Sbjct: 513 gaagctactcaccatggaccagtcaccaatacaccaacgatgtttgttgagataggaagt 572

             
Query: 562 ac 563
           ||
Sbjct: 573 ac 574
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>ref|XM_450260.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 839

 Score =  513 bits (259), Expect = e-142
 Identities = 420/476 (88%)
 Strand = Plus / Plus

                                                                       
Query: 82  gcgacggcgtccgacccggcgtccatcggccccgccgccgcgttcctggccatgcctggc 141
           ||||||||||| ||||||||||| |||||||| |||||||| ||||| |||||||| |||
Sbjct: 154 gcgacggcgtcggacccggcgtctatcggcccagccgccgccttcctcgccatgcccggc 213

                                                                       
Query: 142 tggtcccccggcccgcccatcccggaggggatggagagctttacaaatgggaatgttagg 201
           ||||| ||||||||||||||||| ||||||||||||||||||||||| ||| | ||| | 
Sbjct: 214 tggtctcccggcccgcccatccccgaggggatggagagctttacaaacggggacgttcga 273

                                                                       
Query: 202 ttattgaagcatgaacgcagcattgttgcagaggatgatcttgaccgtcggtggcaggaa 261
            ||||||||||||||||||||||  |||| |||||||||||||||   |||||||||| |
Sbjct: 274 ctattgaagcatgaacgcagcatcattgcggaggatgatcttgacaaccggtggcaggca 333

                                                                       
Query: 262 gccactggagaggctgtttccgaggtcatattcctcagcaaacacactgcagtctccaat 321
           |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| 
Sbjct: 334 gccactggagaggctgtttctgaggtcatattcctcagcaaacacactgctgtctccaac 393

                                                                       
Query: 322 cgccctgcactcactgtccatccaatcggtgtgccacatctgagggaggatgagannnnn 381
           || ||||| || ||||||||||||||||||||||||||||| || || |||||||     
Sbjct: 394 cgtcctgcgcttactgtccatccaatcggtgtgccacatctaagagaagatgagacgcca 453

                                                                       
Query: 382 nntcaaggagggaggcctggatgggcagcggtgccaaaccctcgaattggcccatggtta 441
             |||||||||||| || |||||||||||  |||| || ||||||||||| |||||| | 
Sbjct: 454 cctcaaggagggagaccaggatgggcagctctgcccaatcctcgaattggtccatggctc 513

                                                                       
Query: 442 cggttgatgcaaaaggttgctgcagaccaaggtcttgttccagagttcgagattacactt 501
           || |||||||||||| |||| | |||||||||||||||||||||||| ||||||||||| 
Sbjct: 514 cgtttgatgcaaaagattgcggtagaccaaggtcttgttccagagtttgagattacactg 573

                                                                   
Query: 502 gaagctactcaccatggaccacttaccagtacacccacgatgtttgttgagatagg 557
           ||||||||||||||||||||| | |||| |||||| ||||||||||||||||||||
Sbjct: 574 gaagctactcaccatggaccagtcaccaatacaccaacgatgtttgttgagatagg 629
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>dbj|AK120327.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013058A15, full
           insert sequence
          Length = 839

 Score =  513 bits (259), Expect = e-142
 Identities = 420/476 (88%)
 Strand = Plus / Plus

                                                                       
Query: 82  gcgacggcgtccgacccggcgtccatcggccccgccgccgcgttcctggccatgcctggc 141
           ||||||||||| ||||||||||| |||||||| |||||||| ||||| |||||||| |||
Sbjct: 154 gcgacggcgtcggacccggcgtctatcggcccagccgccgccttcctcgccatgcccggc 213

                                                                       
Query: 142 tggtcccccggcccgcccatcccggaggggatggagagctttacaaatgggaatgttagg 201
           ||||| ||||||||||||||||| ||||||||||||||||||||||| ||| | ||| | 
Sbjct: 214 tggtctcccggcccgcccatccccgaggggatggagagctttacaaacggggacgttcga 273

                                                                       
Query: 202 ttattgaagcatgaacgcagcattgttgcagaggatgatcttgaccgtcggtggcaggaa 261
            ||||||||||||||||||||||  |||| |||||||||||||||   |||||||||| |
Sbjct: 274 ctattgaagcatgaacgcagcatcattgcggaggatgatcttgacaaccggtggcaggca 333

                                                                       
Query: 262 gccactggagaggctgtttccgaggtcatattcctcagcaaacacactgcagtctccaat 321
           |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| 
Sbjct: 334 gccactggagaggctgtttctgaggtcatattcctcagcaaacacactgctgtctccaac 393

                                                                       
Query: 322 cgccctgcactcactgtccatccaatcggtgtgccacatctgagggaggatgagannnnn 381
           || ||||| || ||||||||||||||||||||||||||||| || || |||||||     
Sbjct: 394 cgtcctgcgcttactgtccatccaatcggtgtgccacatctaagagaagatgagacgcca 453

                                                                       
Query: 382 nntcaaggagggaggcctggatgggcagcggtgccaaaccctcgaattggcccatggtta 441
             |||||||||||| || |||||||||||  |||| || ||||||||||| |||||| | 
Sbjct: 454 cctcaaggagggagaccaggatgggcagctctgcccaatcctcgaattggtccatggctc 513

                                                                       
Query: 442 cggttgatgcaaaaggttgctgcagaccaaggtcttgttccagagttcgagattacactt 501
           || |||||||||||| |||| | |||||||||||||||||||||||| ||||||||||| 
Sbjct: 514 cgtttgatgcaaaagattgcggtagaccaaggtcttgttccagagtttgagattacactg 573

                                                                   
Query: 502 gaagctactcaccatggaccacttaccagtacacccacgatgtttgttgagatagg 557
           ||||||||||||||||||||| | |||| |||||| ||||||||||||||||||||
Sbjct: 574 gaagctactcaccatggaccagtcaccaatacaccaacgatgtttgttgagatagg 629
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>dbj|AK065068.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001K02, full
           insert sequence
          Length = 2943

 Score =  513 bits (259), Expect = e-142
 Identities = 420/476 (88%)
 Strand = Plus / Plus

                                                                       
Query: 82  gcgacggcgtccgacccggcgtccatcggccccgccgccgcgttcctggccatgcctggc 141
           ||||||||||| ||||||||||| |||||||| |||||||| ||||| |||||||| |||
Sbjct: 138 gcgacggcgtcggacccggcgtctatcggcccagccgccgccttcctcgccatgcccggc 197

                                                                       
Query: 142 tggtcccccggcccgcccatcccggaggggatggagagctttacaaatgggaatgttagg 201
           ||||| ||||||||||||||||| ||||||||||||||||||||||| ||| | ||| | 
Sbjct: 198 tggtctcccggcccgcccatccccgaggggatggagagctttacaaacggggacgttcga 257

                                                                       
Query: 202 ttattgaagcatgaacgcagcattgttgcagaggatgatcttgaccgtcggtggcaggaa 261
            ||||||||||||||||||||||  |||| |||||||||||||||   |||||||||| |
Sbjct: 258 ctattgaagcatgaacgcagcatcattgcggaggatgatcttgacaaccggtggcaggca 317

                                                                       
Query: 262 gccactggagaggctgtttccgaggtcatattcctcagcaaacacactgcagtctccaat 321
           |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| 
Sbjct: 318 gccactggagaggctgtttctgaggtcatattcctcagcaaacacactgctgtctccaac 377

                                                                       
Query: 322 cgccctgcactcactgtccatccaatcggtgtgccacatctgagggaggatgagannnnn 381
           || ||||| || ||||||||||||||||||||||||||||| || || |||||||     
Sbjct: 378 cgtcctgcgcttactgtccatccaatcggtgtgccacatctaagagaagatgagacgcca 437

                                                                       
Query: 382 nntcaaggagggaggcctggatgggcagcggtgccaaaccctcgaattggcccatggtta 441
             |||||||||||| || |||||||||||  |||| || ||||||||||| |||||| | 
Sbjct: 438 cctcaaggagggagaccaggatgggcagctctgcccaatcctcgaattggtccatggctc 497

                                                                       
Query: 442 cggttgatgcaaaaggttgctgcagaccaaggtcttgttccagagttcgagattacactt 501
           || |||||||||||| |||| | |||||||||||||||||||||||| ||||||||||| 
Sbjct: 498 cgtttgatgcaaaagattgcggtagaccaaggtcttgttccagagtttgagattacactg 557

                                                                   
Query: 502 gaagctactcaccatggaccacttaccagtacacccacgatgtttgttgagatagg 557
           ||||||||||||||||||||| | |||| |||||| ||||||||||||||||||||
Sbjct: 558 gaagctactcaccatggaccagtcaccaatacaccaacgatgtttgttgagatagg 613
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>dbj|AK100378.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023085B20, full
           insert sequence
          Length = 3357

 Score =  313 bits (158), Expect = 3e-82
 Identities = 242/270 (89%)
 Strand = Plus / Plus

                                                                       
Query: 82  gcgacggcgtccgacccggcgtccatcggccccgccgccgcgttcctggccatgcctggc 141
           ||||||||||| | ||||||||| |||||||| |||||||| ||||| |||||||| |||
Sbjct: 94  gcgacggcgtcgggcccggcgtctatcggcccagccgccgccttcctcgccatgcccggc 153

                                                                       
Query: 142 tggtcccccggcccgcccatcccggaggggatggagagctttacaaatgggaatgttagg 201
           ||||| ||||||||||||||||| ||||||||||||||||||||||| ||| | ||| | 
Sbjct: 154 tggtctcccggcccgcccatccccgaggggatggagagctttacaaacggggacgttcga 213

                                                                       
Query: 202 ttattgaagcatgaacgcagcattgttgcagaggatgatcttgaccgtcggtggcaggaa 261
            ||||||||||||||||||||||  |||| |||||||||||||||   |||||||||| |
Sbjct: 214 ctattgaagcatgaacgcagcatcattgcggaggatgatcttgacaaccggtggcaggca 273

                                                                       
Query: 262 gccactggagaggctgtttccgaggtcatattcctcagcaaacacactgcagtctccaat 321
           |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| 
Sbjct: 274 gccactggagaggctgtttctgaggtcatattcctcagcaaacacactgctgtctccaac 333

                                         
Query: 322 cgccctgcactcactgtccatccaatcggt 351
           || ||||| || ||||||||||||||||||
Sbjct: 334 cgtcctgcgcttactgtccatccaatcggt 363



 Score =  198 bits (100), Expect = 1e-47
 Identities = 180/209 (86%)
 Strand = Plus / Plus

                                                                       
Query: 349 ggtgtgccacatctgagggaggatgagannnnnnntcaaggagggaggcctggatgggca 408
           |||||||||||||| || || |||||||       |||||||||||| || |||||||||
Sbjct: 680 ggtgtgccacatctaagagaagatgagacgccacctcaaggagggagaccaggatgggca 739

                                                                       
Query: 409 gcggtgccaaaccctcgaattggcccatggttacggttgatgcaaaaggttgctgcagac 468
           ||  |||| || ||||||||||| |||||| | || |||||||||||| |||| | ||||
Sbjct: 740 gctctgcccaatcctcgaattggtccatggctccgtttgatgcaaaagattgcggtagac 799

                                                                       
Query: 469 caaggtcttgttccagagttcgagattacacttgaagctactcaccatggaccacttacc 528
           |||||||||||||||||||| ||||||||||| ||||||||||||||||||||| | |||
Sbjct: 800 caaggtcttgttccagagtttgagattacactggaagctactcaccatggaccagtcacc 859

                                        
Query: 529 agtacacccacgatgtttgttgagatagg 557
           | |||||| ||||||||||||||||||||
Sbjct: 860 aatacaccaacgatgtttgttgagatagg 888
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score =  220 bits (111), Expect = 4e-54
 Identities = 168/187 (89%)
 Strand = Plus / Plus

                                                                           
Query: 165     ggaggggatggagagctttacaaatgggaatgttaggttattgaagcatgaacgcagcat 224
               |||||||||||||||||||||||| ||| | ||| |  ||||||||||||||||||||||
Sbjct: 3567361 ggaggggatggagagctttacaaacggggacgttcgactattgaagcatgaacgcagcat 3567420

                                                                           
Query: 225     tgttgcagaggatgatcttgaccgtcggtggcaggaagccactggagaggctgtttccga 284
                 |||| |||||||||||||||   |||||||||| ||||||||||||||||||||| ||
Sbjct: 3567421 cattgcggaggatgatcttgacaaccggtggcaggcagccactggagaggctgtttctga 3567480

                                                                           
Query: 285     ggtcatattcctcagcaaacacactgcagtctccaatcgccctgcactcactgtccatcc 344
               ||||||||||||||||||||||||||| |||||||| || ||||| || |||||||||||
Sbjct: 3567481 ggtcatattcctcagcaaacacactgctgtctccaaccgtcctgcgcttactgtccatcc 3567540

                      
Query: 345     aatcggt 351
               |||||||
Sbjct: 3567541 aatcggt 3567547



 Score =  109 bits (55), Expect = 1e-20
 Identities = 117/140 (83%)
 Strand = Plus / Plus

                                                                           
Query: 349     ggtgtgccacatctgagggaggatgagannnnnnntcaaggagggaggcctggatgggca 408
               |||||||||||||| || || |||||||       |||||||||||| || |||||||||
Sbjct: 3567864 ggtgtgccacatctaagagaagatgagacgccacctcaaggagggagaccaggatgggca 3567923

                                                                           
Query: 409     gcggtgccaaaccctcgaattggcccatggttacggttgatgcaaaaggttgctgcagac 468
               ||  |||| || ||||||||||| |||||| | || |||||||||||| |||| | ||||
Sbjct: 3567924 gctctgcccaatcctcgaattggtccatggctccgtttgatgcaaaagattgcggtagac 3567983

                                   
Query: 469     caaggtcttgttccagagtt 488
               ||||||||||||||||||||
Sbjct: 3567984 caaggtcttgttccagagtt 3568003



 Score =  109 bits (55), Expect = 1e-20
 Identities = 76/83 (91%)
 Strand = Plus / Plus

                                                                           
Query: 82      gcgacggcgtccgacccggcgtccatcggccccgccgccgcgttcctggccatgcctggc 141
               ||||||||||| ||||||||||| |||||||| |||||||| ||||| |||||||| |||
Sbjct: 3566027 gcgacggcgtcggacccggcgtctatcggcccagccgccgccttcctcgccatgcccggc 3566086

                                      
Query: 142     tggtcccccggcccgcccatccc 164
               ||||| |||||||||||||||||
Sbjct: 3566087 tggtctcccggcccgcccatccc 3566109



 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 62/67 (92%)
 Strand = Plus / Plus

                                                                           
Query: 491     agattacacttgaagctactcaccatggaccacttaccagtacacccacgatgtttgttg 550
               |||||||||| ||||||||||||||||||||| | |||| |||||| |||||||||||||
Sbjct: 3568083 agattacactggaagctactcaccatggaccagtcaccaatacaccaacgatgtttgttg 3568142

                      
Query: 551     agatagg 557
               |||||||
Sbjct: 3568143 agatagg 3568149
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>dbj|AP005571.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OJ1451_A02
          Length = 135861

 Score =  220 bits (111), Expect = 4e-54
 Identities = 168/187 (89%)
 Strand = Plus / Plus

                                                                          
Query: 165    ggaggggatggagagctttacaaatgggaatgttaggttattgaagcatgaacgcagcat 224
              |||||||||||||||||||||||| ||| | ||| |  ||||||||||||||||||||||
Sbjct: 120249 ggaggggatggagagctttacaaacggggacgttcgactattgaagcatgaacgcagcat 120308

                                                                          
Query: 225    tgttgcagaggatgatcttgaccgtcggtggcaggaagccactggagaggctgtttccga 284
                |||| |||||||||||||||   |||||||||| ||||||||||||||||||||| ||
Sbjct: 120309 cattgcggaggatgatcttgacaaccggtggcaggcagccactggagaggctgtttctga 120368

                                                                          
Query: 285    ggtcatattcctcagcaaacacactgcagtctccaatcgccctgcactcactgtccatcc 344
              ||||||||||||||||||||||||||| |||||||| || ||||| || |||||||||||
Sbjct: 120369 ggtcatattcctcagcaaacacactgctgtctccaaccgtcctgcgcttactgtccatcc 120428

                     
Query: 345    aatcggt 351
              |||||||
Sbjct: 120429 aatcggt 120435



 Score =  109 bits (55), Expect = 1e-20
 Identities = 117/140 (83%)
 Strand = Plus / Plus

                                                                          
Query: 349    ggtgtgccacatctgagggaggatgagannnnnnntcaaggagggaggcctggatgggca 408
              |||||||||||||| || || |||||||       |||||||||||| || |||||||||
Sbjct: 120752 ggtgtgccacatctaagagaagatgagacgccacctcaaggagggagaccaggatgggca 120811

                                                                          
Query: 409    gcggtgccaaaccctcgaattggcccatggttacggttgatgcaaaaggttgctgcagac 468
              ||  |||| || ||||||||||| |||||| | || |||||||||||| |||| | ||||
Sbjct: 120812 gctctgcccaatcctcgaattggtccatggctccgtttgatgcaaaagattgcggtagac 120871

                                  
Query: 469    caaggtcttgttccagagtt 488
              ||||||||||||||||||||
Sbjct: 120872 caaggtcttgttccagagtt 120891



 Score =  109 bits (55), Expect = 1e-20
 Identities = 76/83 (91%)
 Strand = Plus / Plus

                                                                          
Query: 82     gcgacggcgtccgacccggcgtccatcggccccgccgccgcgttcctggccatgcctggc 141
              ||||||||||| ||||||||||| |||||||| |||||||| ||||| |||||||| |||
Sbjct: 118915 gcgacggcgtcggacccggcgtctatcggcccagccgccgccttcctcgccatgcccggc 118974

                                     
Query: 142    tggtcccccggcccgcccatccc 164
              ||||| |||||||||||||||||
Sbjct: 118975 tggtctcccggcccgcccatccc 118997



 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 62/67 (92%)
 Strand = Plus / Plus

                                                                          
Query: 491    agattacacttgaagctactcaccatggaccacttaccagtacacccacgatgtttgttg 550
              |||||||||| ||||||||||||||||||||| | |||| |||||| |||||||||||||
Sbjct: 120971 agattacactggaagctactcaccatggaccagtcaccaatacaccaacgatgtttgttg 121030

                     
Query: 551    agatagg 557
              |||||||
Sbjct: 121031 agatagg 121037
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>dbj|AP005587.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0499G10
          Length = 158375

 Score =  220 bits (111), Expect = 4e-54
 Identities = 168/187 (89%)
 Strand = Plus / Plus

                                                                         
Query: 165   ggaggggatggagagctttacaaatgggaatgttaggttattgaagcatgaacgcagcat 224
             |||||||||||||||||||||||| ||| | ||| |  ||||||||||||||||||||||
Sbjct: 53136 ggaggggatggagagctttacaaacggggacgttcgactattgaagcatgaacgcagcat 53195

                                                                         
Query: 225   tgttgcagaggatgatcttgaccgtcggtggcaggaagccactggagaggctgtttccga 284
               |||| |||||||||||||||   |||||||||| ||||||||||||||||||||| ||
Sbjct: 53196 cattgcggaggatgatcttgacaaccggtggcaggcagccactggagaggctgtttctga 53255

                                                                         
Query: 285   ggtcatattcctcagcaaacacactgcagtctccaatcgccctgcactcactgtccatcc 344
             ||||||||||||||||||||||||||| |||||||| || ||||| || |||||||||||
Sbjct: 53256 ggtcatattcctcagcaaacacactgctgtctccaaccgtcctgcgcttactgtccatcc 53315

                    
Query: 345   aatcggt 351
             |||||||
Sbjct: 53316 aatcggt 53322



 Score =  109 bits (55), Expect = 1e-20
 Identities = 117/140 (83%)
 Strand = Plus / Plus

                                                                         
Query: 349   ggtgtgccacatctgagggaggatgagannnnnnntcaaggagggaggcctggatgggca 408
             |||||||||||||| || || |||||||       |||||||||||| || |||||||||
Sbjct: 53639 ggtgtgccacatctaagagaagatgagacgccacctcaaggagggagaccaggatgggca 53698

                                                                         
Query: 409   gcggtgccaaaccctcgaattggcccatggttacggttgatgcaaaaggttgctgcagac 468
             ||  |||| || ||||||||||| |||||| | || |||||||||||| |||| | ||||
Sbjct: 53699 gctctgcccaatcctcgaattggtccatggctccgtttgatgcaaaagattgcggtagac 53758

                                 
Query: 469   caaggtcttgttccagagtt 488
             ||||||||||||||||||||
Sbjct: 53759 caaggtcttgttccagagtt 53778



 Score =  109 bits (55), Expect = 1e-20
 Identities = 76/83 (91%)
 Strand = Plus / Plus

                                                                         
Query: 82    gcgacggcgtccgacccggcgtccatcggccccgccgccgcgttcctggccatgcctggc 141
             ||||||||||| ||||||||||| |||||||| |||||||| ||||| |||||||| |||
Sbjct: 51802 gcgacggcgtcggacccggcgtctatcggcccagccgccgccttcctcgccatgcccggc 51861

                                    
Query: 142   tggtcccccggcccgcccatccc 164
             ||||| |||||||||||||||||
Sbjct: 51862 tggtctcccggcccgcccatccc 51884



 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 62/67 (92%)
 Strand = Plus / Plus

                                                                         
Query: 491   agattacacttgaagctactcaccatggaccacttaccagtacacccacgatgtttgttg 550
             |||||||||| ||||||||||||||||||||| | |||| |||||| |||||||||||||
Sbjct: 53858 agattacactggaagctactcaccatggaccagtcaccaatacaccaacgatgtttgttg 53917

                    
Query: 551   agatagg 557
             |||||||
Sbjct: 53918 agatagg 53924
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>ref|XM_481756.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1162

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 60/68 (88%)
 Strand = Plus / Plus

                                                                       
Query: 115 gccgccgcgttcctggccatgcctggctggtcccccggcccgcccatcccggaggggatg 174
           |||||||||||||| |||||||| |||||| ||||||||||  |||||||||| ||  ||
Sbjct: 143 gccgccgcgttcctcgccatgcccggctggacccccggcccctccatcccggacggcgtg 202

                   
Query: 175 gagagctt 182
           ||||||||
Sbjct: 203 gagagctt 210
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>dbj|AK073244.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033001O09, full
           insert sequence
          Length = 1161

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 60/68 (88%)
 Strand = Plus / Plus

                                                                       
Query: 115 gccgccgcgttcctggccatgcctggctggtcccccggcccgcccatcccggaggggatg 174
           |||||||||||||| |||||||| |||||| ||||||||||  |||||||||| ||  ||
Sbjct: 142 gccgccgcgttcctcgccatgcccggctggacccccggcccctccatcccggacggcgtg 201

                   
Query: 175 gagagctt 182
           ||||||||
Sbjct: 202 gagagctt 209
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 47/52 (90%)
 Strand = Plus / Plus

                                                                    
Query: 115      gccgccgcgttcctggccatgcctggctggtcccccggcccgcccatcccgg 166
                |||||||||||||| |||||||| |||||| ||||||||||  |||||||||
Sbjct: 15266451 gccgccgcgttcctcgccatgcccggctggacccccggcccctccatcccgg 15266502
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>dbj|AP005491.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0062G05
          Length = 152802

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 47/52 (90%)
 Strand = Plus / Plus

                                                                 
Query: 115   gccgccgcgttcctggccatgcctggctggtcccccggcccgcccatcccgg 166
             |||||||||||||| |||||||| |||||| ||||||||||  |||||||||
Sbjct: 52082 gccgccgcgttcctcgccatgcccggctggacccccggcccctccatcccgg 52133
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>dbj|AP004574.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0702G08
          Length = 144596

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 47/52 (90%)
 Strand = Plus / Plus

                                                                  
Query: 115    gccgccgcgttcctggccatgcctggctggtcccccggcccgcccatcccgg 166
              |||||||||||||| |||||||| |||||| ||||||||||  |||||||||
Sbjct: 114276 gccgccgcgttcctcgccatgcccggctggacccccggcccctccatcccgg 114327
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>ref|NM_126426.3| Arabidopsis thaliana GEK1 (GEKO1) AT2G03800 (GEK1) mRNA, complete
           cds
          Length = 1197

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 48/56 (85%)
 Strand = Plus / Plus

                                                                   
Query: 385 caaggagggaggcctggatgggcagcggtgccaaaccctcgaattggcccatggtt 440
           |||||||| | |||||||||||| ||| |||||| | || ||||||| ||||||||
Sbjct: 327 caaggaggaaagcctggatgggcggcgttgccaagcactagaattggtccatggtt 382



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 39/45 (86%)
 Strand = Plus / Plus

                                                        
Query: 478 gttccagagttcgagattacacttgaagctactcaccatggacca 522
           ||||| ||||| ||||| ||| | ||||||||||| |||||||||
Sbjct: 420 gttcctgagtttgagataacattggaagctactcatcatggacca 464
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>gb|AC133459.9| Mus musculus chromosome 12, clone RP23-383O15, complete sequence
          Length = 227171

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                              
Query: 31     agcagagtcggaggaggaggggaataggagaa 62
              |||||||| ||||||||||||||||| |||||
Sbjct: 207520 agcagagttggaggaggaggggaatatgagaa 207489
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>gb|AC006836.7| Arabidopsis thaliana chromosome 2 clone F19B11 map RNSI, complete
             sequence
          Length = 87543

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 48/56 (85%)
 Strand = Plus / Plus

                                                                     
Query: 385   caaggagggaggcctggatgggcagcggtgccaaaccctcgaattggcccatggtt 440
             |||||||| | |||||||||||| ||| |||||| | || ||||||| ||||||||
Sbjct: 78458 caaggaggaaagcctggatgggcggcgttgccaagcactagaattggtccatggtt 78513
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>emb|BX821728.1|CNS0A88A Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL69ZB07 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 1072

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 48/56 (85%)
 Strand = Plus / Plus

                                                                   
Query: 385 caaggagggaggcctggatgggcagcggtgccaaaccctcgaattggcccatggtt 440
           |||||||| | |||||||||||| ||| |||||| | || ||||||| ||||||||
Sbjct: 296 caaggaggaaagcctggatgggcggcgttgccaagcactagaattggtccatggtt 351



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 39/45 (86%)
 Strand = Plus / Plus

                                                        
Query: 478 gttccagagttcgagattacacttgaagctactcaccatggacca 522
           ||||| ||||| ||||| ||| | ||||||||||| |||||||||
Sbjct: 389 gttcctgagtttgagataacattggaagctactcatcatggacca 433
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>emb|BX821698.1|CNS0A86Q Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL66ZB06 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 1139

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 48/56 (85%)
 Strand = Plus / Plus

                                                                   
Query: 385 caaggagggaggcctggatgggcagcggtgccaaaccctcgaattggcccatggtt 440
           |||||||| | |||||||||||| ||| |||||| | || ||||||| ||||||||
Sbjct: 310 caaggaggaaagcctggatgggcggcgttgccaagcactagaattggtccatggtt 365
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>gb|BT022079.1| Arabidopsis thaliana unknown protein (At2g03800) mRNA, complete cds
          Length = 990

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 48/56 (85%)
 Strand = Plus / Plus

                                                                   
Query: 385 caaggagggaggcctggatgggcagcggtgccaaaccctcgaattggcccatggtt 440
           |||||||| | |||||||||||| ||| |||||| | || ||||||| ||||||||
Sbjct: 334 caaggaggaaagcctggatgggcggcgttgccaagcactagaattggaccatggtt 389



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 39/45 (86%)
 Strand = Plus / Plus

                                                        
Query: 478 gttccagagttcgagattacacttgaagctactcaccatggacca 522
           ||||| ||||| ||||| ||| | ||||||||||| |||||||||
Sbjct: 427 gttcctgagtttgagataacattggaagctactcatcatggacca 471
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>dbj|AB091252.1| Arabidopsis thaliana GEK1 mRNA for GEKO1, complete cds
          Length = 1217

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 48/56 (85%)
 Strand = Plus / Plus

                                                                   
Query: 385 caaggagggaggcctggatgggcagcggtgccaaaccctcgaattggcccatggtt 440
           |||||||| | |||||||||||| ||| |||||| | || ||||||| ||||||||
Sbjct: 346 caaggaggaaagcctggatgggcggcgttgccaagcactagaattggtccatggtt 401



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 39/45 (86%)
 Strand = Plus / Plus

                                                        
Query: 478 gttccagagttcgagattacacttgaagctactcaccatggacca 522
           ||||| ||||| ||||| ||| | ||||||||||| |||||||||
Sbjct: 439 gttcctgagtttgagataacattggaagctactcatcatggacca 483
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>gb|AC140376.3| Mus musculus BAC clone RP24-78P21 from 12, complete sequence
          Length = 246636

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                              
Query: 31     agcagagtcggaggaggaggggaataggagaa 62
              |||||||| ||||||||||||||||| |||||
Sbjct: 111744 agcagagttggaggaggaggggaatatgagaa 111775
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>ref|NM_001007500.1| Xenopus tropicalis irak2 protein (irak2), mRNA
          Length = 2652

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 327 tgcactcactgtccatccaatc 348
           ||||||||||||||||||||||
Sbjct: 743 tgcactcactgtccatccaatc 764
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>gb|BC079937.1| Xenopus tropicalis irak2 protein, mRNA (cDNA clone MGC:79591
           IMAGE:6979096), complete cds
          Length = 2652

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 327 tgcactcactgtccatccaatc 348
           ||||||||||||||||||||||
Sbjct: 743 tgcactcactgtccatccaatc 764
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>gb|AC006582.13|AC006582 Pan troglodytes 12cp12 BAC RPCI43-77C18 (Roswell Park Cancer Institute
              Human BAC Library) complete sequence
          Length = 186092

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 292    ttcctcagcaaacacactgcagtctc 317
              ||||||||||||||||||| ||||||
Sbjct: 115206 ttcctcagcaaacacactgaagtctc 115181
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>gb|AC011604.10| Homo sapiens 12p12-31.7-37.2 BAC RP11-80N2 (Roswell Park Cancer
             Institute Human BAC Library) complete sequence
          Length = 175606

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 292   ttcctcagcaaacacactgcagtctc 317
             ||||||||||||||||||| ||||||
Sbjct: 74361 ttcctcagcaaacacactgaagtctc 74386
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>emb|AL773532.5| Mouse DNA sequence from clone RP23-48F16 on chromosome 11, complete
            sequence
          Length = 72745

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 40   ggaggaggaggggaataggagaaga 64
            ||||||||||||||| |||||||||
Sbjct: 2418 ggaggaggaggggaaaaggagaaga 2442
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>gb|AC097382.3| Homo sapiens BAC clone RP11-367J11 from 4, complete sequence
          Length = 210515

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 41     gaggaggaggggaataggaga 61
              |||||||||||||||||||||
Sbjct: 171457 gaggaggaggggaataggaga 171437
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>gb|AC110807.3| Homo sapiens BAC clone RP11-745F5 from 2, complete sequence
          Length = 124489

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 543   gtttgttgagataggaagtac 563
             |||||||||||||||||||||
Sbjct: 20829 gtttgttgagataggaagtac 20809
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>gb|AC104772.3| Homo sapiens BAC clone RP11-3I22 from 2, complete sequence
          Length = 106526

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 302   aacacactgcagtctccaatc 322
             |||||||||||||||||||||
Sbjct: 71045 aacacactgcagtctccaatc 71025
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>emb|AL808143.5| Mouse DNA sequence from clone RP23-384K11 on chromosome 2, complete
             sequence
          Length = 202474

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 42    aggaggaggggaataggagaa 62
             |||||||||||||||||||||
Sbjct: 60406 aggaggaggggaataggagaa 60386
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>gb|AC121281.19| Mus musculus chromosome 3, clone RP23-61G16, complete sequence
          Length = 196761

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 225  tgttgcagaggatgatcttg 244
            ||||||||||||||||||||
Sbjct: 7868 tgttgcagaggatgatcttg 7887
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>gb|AC102841.7| Mus musculus chromosome 7, clone RP24-371C6, complete sequence
          Length = 162151

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 225  tgttgcagaggatgatcttg 244
            ||||||||||||||||||||
Sbjct: 1629 tgttgcagaggatgatcttg 1610
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>gb|AC130529.2| Mus musculus BAC clone RP23-124O11 from chromosome 16, complete sequence
          Length = 231967

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 225    tgttgcagaggatgatcttg 244
              ||||||||||||||||||||
Sbjct: 161039 tgttgcagaggatgatcttg 161058
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>gb|AC156987.7| Mus musculus chromosome 7, clone RP23-78K13, complete sequence
          Length = 231140

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 225   tgttgcagaggatgatcttg 244
             ||||||||||||||||||||
Sbjct: 85215 tgttgcagaggatgatcttg 85234
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>gb|AC121546.13| Mus musculus chromosome 6, clone RP24-537N12, complete sequence
          Length = 207556

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 40     ggaggaggaggggaataggagaag 63
              ||||||||||||||| ||||||||
Sbjct: 156065 ggaggaggaggggaaaaggagaag 156088
to top
>gb|AC130821.3| Mus musculus BAC clone RP23-205K12 from chromosome 13, complete
             sequence
          Length = 227411

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 40    ggaggaggaggggaatagga 59
             ||||||||||||||||||||
Sbjct: 14787 ggaggaggaggggaatagga 14806
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>ref|XM_548372.2| PREDICTED: Canis familiaris similar to small nuclear RNA activating
            complex, polypeptide 4, 190kDa (LOC491251), mRNA
          Length = 5850

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 27   aagaagcagagtcggaggaggagg 50
            ||||||||||||||| ||||||||
Sbjct: 2791 aagaagcagagtcgggggaggagg 2814
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>gb|AC123043.2| Mus musculus BAC clone RP24-547G7 from 13, complete sequence
          Length = 230940

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 40    ggaggaggaggggaatagga 59
             ||||||||||||||||||||
Sbjct: 71384 ggaggaggaggggaatagga 71365
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>emb|AL662858.15| Mouse DNA sequence from clone RP23-166O21 on chromosome 11, complete
             sequence
          Length = 195612

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 225   tgttgcagaggatgatcttg 244
             ||||||||||||||||||||
Sbjct: 70085 tgttgcagaggatgatcttg 70104
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>gb|AC112221.2| Homo sapiens chromosome 3 clone RP11-11C8, complete sequence
          Length = 151382

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 40     ggaggaggaggggaataggagaag 63
              ||||||||||||||| ||||||||
Sbjct: 145019 ggaggaggaggggaagaggagaag 144996



 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 40     ggaggaggaggggaataggagaag 63
              ||||||||||||||| ||||||||
Sbjct: 144988 ggaggaggaggggaagaggagaag 144965
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>gb|AC115014.6| Mus musculus chromosome 3, clone RP24-196G4, complete sequence
          Length = 169069

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 225   tgttgcagaggatgatcttg 244
             ||||||||||||||||||||
Sbjct: 16302 tgttgcagaggatgatcttg 16283
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                            
Query: 40       ggaggaggaggggaataggagaagatgg 67
                ||||||| ||||||| ||||||||||||
Sbjct: 27858834 ggaggagaaggggaagaggagaagatgg 27858861
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>dbj|AP005452.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0453E03
          Length = 159980

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 40    ggaggaggaggggaataggagaagatgg 67
             ||||||| ||||||| ||||||||||||
Sbjct: 22192 ggaggagaaggggaagaggagaagatgg 22219
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>emb|Z22577.1|SAGLCTRAA S.antibioticus membrane protein, lipoprotein, and
           glycosyltransferase genes
          Length = 3389

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 114 cgccgccgcgttcctggcca 133
           ||||||||||||||||||||
Sbjct: 593 cgccgccgcgttcctggcca 612
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>gb|AY104706.1| Zea mays PCO076122 mRNA sequence
          Length = 1382

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 105  catcggccccgccgccgcgttcct 128
            ||||||||||||||||| ||||||
Sbjct: 986  catcggccccgccgccgagttcct 1009
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>gb|AC163763.3| Pan troglodytes BAC clone CH251-180G5 from chromosome unknown,
            complete sequence
          Length = 157645

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 27   aagaagcagagtcggaggaggaggggaa 54
            |||||| ||||| |||||||||||||||
Sbjct: 7135 aagaagaagagtaggaggaggaggggaa 7162
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>gb|AC154677.2| Mus musculus BAC clone RP24-299I4 from chromosome 14, complete sequence
          Length = 149259

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 289   atattcctcagcaaacacac 308
             ||||||||||||||||||||
Sbjct: 97856 atattcctcagcaaacacac 97837
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>gb|AC142502.3| Mus musculus BAC clone RP24-530L11 from 3, complete sequence
          Length = 160259

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 326   ctgcactcactgtccatcca 345
             ||||||||||||||||||||
Sbjct: 63015 ctgcactcactgtccatcca 63034
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>emb|AL807795.7| Mouse DNA sequence from clone RP23-199A9 on chromosome X, complete
              sequence
          Length = 152159

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 165    ggaggggatggagagcttta 184
              ||||||||||||||||||||
Sbjct: 104541 ggaggggatggagagcttta 104560
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>gb|AC135851.1| Homo sapiens chromosome 3 clone RP11-152N21, complete sequence
          Length = 157652

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 40     ggaggaggaggggaataggagaag 63
              ||||||||||||||| ||||||||
Sbjct: 129607 ggaggaggaggggaagaggagaag 129630



 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 40     ggaggaggaggggaataggagaag 63
              ||||||||||||||| ||||||||
Sbjct: 129576 ggaggaggaggggaagaggagaag 129599


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,384,108
Number of Sequences: 3902068
Number of extensions: 5384108
Number of successful extensions: 99057
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 98837
Number of HSP's gapped (non-prelim): 211
length of query: 574
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 551
effective length of database: 17,143,297,704
effective search space: 9445957034904
effective search space used: 9445957034904
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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