>AMY_STRLI (Q05884) Alpha-amylase precursor (EC 3.2.1.1) (1,4-alpha-D-glucan|
           glucanohydrolase)
          Length = 919

 Score = 35.4 bits (80), Expect = 0.12
 Identities = 32/71 (45%), Positives = 34/71 (47%), Gaps = 4/71 (5%)
 Frame = +1

Query: 358 AHRRASGRLAVRRAVV--GHHRPAVPLPRERQVQRRGRE--HPCPARGPALRRRVLHGQV 525
           A R ASGRL  R      G HR  +P PR R +Q R RE     P R    RRR  H   
Sbjct: 700 AGRTASGRLHHRHPARRGGAHR-RLPGPRGRPLQARRRELRRLGPVRLGRPRRREAHHLA 758

Query: 526 PHPRADHRPGR 558
            HP   HRPGR
Sbjct: 759 RHPPL-HRPGR 768

>LTBP4_MOUSE (Q8K4G1) Latent transforming growth factor beta-binding protein 4|
           precursor (LTBP-4)
          Length = 1666

 Score = 34.3 bits (77), Expect = 0.28
 Identities = 38/136 (27%), Positives = 43/136 (31%), Gaps = 4/136 (2%)
 Frame = +1

Query: 157 SRGGDACDRGTRL---HGREAAHGAVPAGPGRHALLPQWXXXXXXXXXXXXXXXXXXXGA 327
           SR G A  RG +L   +G E      PAGPG H                           
Sbjct: 433 SRVGKAWGRGCQLCPPYGSEGFREICPAGPGYH-------YSASDLRYNTRPLNQDPPRV 485

Query: 328 EGGDPRLPPLAHRRASGRLAVRRAVVGHHRPAVPLPRERQVQR-RGREHPCPARGPALRR 504
               PR+PP   R  +G L  RR          P PR R   R R    P P   P    
Sbjct: 486 TFNQPRVPPATPRPPTGFLPTRRPEPRPDPGPQPEPRPRPEPRPRPESRPRPEPRPRPEP 545

Query: 505 RVLHGQVPHPRADHRP 552
           R      P P +  RP
Sbjct: 546 RPQPESQPRPESRPRP 561

>PKN2_MYXXA (P54736) Serine/threonine-protein kinase pkn2 (EC 2.7.11.1)|
          Length = 830

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 26/90 (28%), Positives = 44/90 (48%), Gaps = 1/90 (1%)
 Frame = +2

Query: 209 RRMELYRPDPADMLSYHNGAVLHGDIAVSVLWYGNFKPAQKAVILDFLLSLTAEPQAASP 388
           R + L +     + + H+  ++H D+    ++       ++A +LDF ++   EP AAS 
Sbjct: 111 RALPLLQQLAEGLAAIHDKGIIHRDLKPENVFISKSARGEQARLLDFGIARLVEPDAAS- 169

Query: 389 SVAQWWGTI-DQQYLSPASAKSSGAGESTR 475
           SV+Q    +   +YLSP  A   GA   TR
Sbjct: 170 SVSQIGVVLGTPEYLSPEQA--VGAKVDTR 197

>SRRM1_MOUSE (Q52KI8) Serine/arginine repetitive matrix protein 1|
           (Plenty-of-prolines 101)
          Length = 946

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 27/82 (32%), Positives = 32/82 (39%), Gaps = 3/82 (3%)
 Frame = +1

Query: 352 PLAHRRASGRLAVRRAVVGHHRPAVPLPRERQVQRRGREHPCPARGPALRRRVLHGQVPH 531
           P +  R+  R   R     H RP     R R      R  P P R P+ RRR    ++P 
Sbjct: 274 PRSRSRSKSRSRTRSRSPSHTRPR-RRHRSRSRSYSPRRRPSPRRRPSPRRRTPPRRMPP 332

Query: 532 P---RADHRPGRDG*TQERRRR 588
           P   R    PGR      RRRR
Sbjct: 333 PPRHRRSRSPGR------RRRR 348

>ADCY5_RABIT (P40144) Adenylate cyclase type 5 (EC 4.6.1.1) (Adenylate cyclase|
           type V) (ATP pyrophosphate-lyase 5) (Adenylyl cyclase 5)
          Length = 1264

 Score = 30.8 bits (68), Expect = 3.1
 Identities = 19/43 (44%), Positives = 21/43 (48%), Gaps = 4/43 (9%)
 Frame = +1

Query: 124 GMALRLCKGSASRGGDACDRGTRLHGREAAHG----AVPAGPG 240
           G + R       RGGD C RG+R   R AA G    A PAG G
Sbjct: 97  GFSFRSKSAWQERGGDDCGRGSRRQRRGAAGGGSTRAPPAGGG 139

>ADCY5_CANFA (P30803) Adenylate cyclase type 5 (EC 4.6.1.1) (Adenylate cyclase|
           type V) (ATP pyrophosphate-lyase 5) (Adenylyl cyclase 5)
           (Ca(2+)-inhibitable adenylyl cyclase)
          Length = 1265

 Score = 30.8 bits (68), Expect = 3.1
 Identities = 19/43 (44%), Positives = 21/43 (48%), Gaps = 4/43 (9%)
 Frame = +1

Query: 124 GMALRLCKGSASRGGDACDRGTRLHGREAAHG----AVPAGPG 240
           G + R       RGGD C RG+R   R AA G    A PAG G
Sbjct: 111 GFSFRSRSAWQERGGDDCGRGSRRRRRGAAGGGSSRAPPAGGG 153

>SRRM1_CHICK (Q5ZMJ9) Serine/arginine repetitive matrix protein 1|
          Length = 888

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 23/72 (31%), Positives = 30/72 (41%)
 Frame = +1

Query: 367 RASGRLAVRRAVVGHHRPAVPLPRERQVQRRGREHPCPARGPALRRRVLHGQVPHPRADH 546
           R+  R   R     H RP       R+ + R R  P P R P+ RRR    ++P P   H
Sbjct: 282 RSKSRSRSRSRSPSHSRP------RRRHRSRSRRRPSPRRRPSPRRRTPPRRMP-PPPRH 334

Query: 547 RPGRDG*TQERR 582
           R  R    + RR
Sbjct: 335 RRSRSPVRRRRR 346



 Score = 30.0 bits (66), Expect = 5.2
 Identities = 22/57 (38%), Positives = 24/57 (42%), Gaps = 3/57 (5%)
 Frame = +1

Query: 391 RRAVVGHHRPAVPLPRERQVQ---RRGREHPCPARGPALRRRVLHGQVPHPRADHRP 552
           RR    H R   P PR+RQ +   RR R  P P   P  RRR      P PR    P
Sbjct: 514 RRRRHSHSRSPSPSPRKRQKEPSPRRRRRSPSP---PPARRRRSPSPPPPPRRRRSP 567

>DNAE2_PROAC (Q6A780) Error-prone DNA polymerase (EC 2.7.7.7)|
          Length = 1134

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 17/56 (30%), Positives = 23/56 (41%)
 Frame = +1

Query: 349 PPLAHRRASGRLAVRRAVVGHHRPAVPLPRERQVQRRGREHPCPARGPALRRRVLH 516
           PP+  R   GR++ R A  GH          R V++    HP    GP +    LH
Sbjct: 6   PPIPWRELEGRISGRPAPHGHQESHADQVGYRHVRKPFDRHPVRPEGPVVPYAELH 61

>L_VSVJO (P16379) Large structural protein (L protein) (Transcriptase)|
           (Replicase) [Includes: RNA-directed RNA polymerase (EC
           2.7.7.48); mRNA (guanine-N(7)-)-methyltransferase (EC
           2.1.1.56); mRNA guanylyltransferase (EC 2.7.7.-)]
          Length = 2109

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
 Frame = +3

Query: 27  HRVLPRSLISLCGRLDLDTLCSST--TATAHKVLWNG 131
           H    +SLI   GR DL T+ + T   +T H+V WNG
Sbjct: 639 HEFFEKSLIYYNGRPDLMTIRNGTLCNSTKHRVCWNG 675

>SWC4_NEUCR (Q870Q1) SWR1-complex protein 4|
          Length = 771

 Score = 30.0 bits (66), Expect = 5.2
 Identities = 15/44 (34%), Positives = 19/44 (43%)
 Frame = +1

Query: 340 PRLPPLAHRRASGRLAVRRAVVGHHRPAVPLPRERQVQRRGREH 471
           P +PP A RR S   +       HH P V  P  R  ++  R H
Sbjct: 366 PEVPPAASRRESLAASSTAGANDHHEPPVREPPVRHERQESRSH 409

>SRRM1_HUMAN (Q8IYB3) Serine/arginine repetitive matrix protein 1|
           (Ser/Arg-related nuclear matrix protein) (SR-related
           nuclear matrix protein of 160 kDa) (SRm160)
          Length = 904

 Score = 29.6 bits (65), Expect = 6.8
 Identities = 24/77 (31%), Positives = 30/77 (38%)
 Frame = +1

Query: 352 PLAHRRASGRLAVRRAVVGHHRPAVPLPRERQVQRRGREHPCPARGPALRRRVLHGQVPH 531
           P +  R+  R   R     H RP     R R      R  P P R P+ RRR    ++P 
Sbjct: 276 PRSRSRSKSRSRTRSRSPSHTRPR-RRHRSRSRSYSPRRRPSPRRRPSPRRRTPPRRMP- 333

Query: 532 PRADHRPGRDG*TQERR 582
           P   HR  R    + RR
Sbjct: 334 PPPRHRRSRSPVRRRRR 350

>POLG_LMVE (P89876) Genome polyprotein [Contains: P1 proteinase (N-terminal|
            protein); Helper component proteinase (EC 3.4.22.45)
            (HC-pro); Protein P3; 6 kDa protein 1 (6K1); Cytoplasmic
            inclusion protein (EC 3.6.1.-) (CI); 6 kDa protein 2
            (6K2); Viral gen
          Length = 3255

 Score = 29.6 bits (65), Expect = 6.8
 Identities = 15/31 (48%), Positives = 19/31 (61%)
 Frame = -3

Query: 522  LPMEHAPSESWSASRTRVLSPAPLDLALAGE 430
            L  E  P E   A++TRV + APLD  LAG+
Sbjct: 2628 LKSELRPMEKVMANKTRVFTAAPLDTLLAGK 2658

>POLG_LMV0 (P31999) Genome polyprotein [Contains: P1 proteinase (N-terminal|
            protein); Helper component proteinase (EC 3.4.22.45)
            (HC-pro); Protein P3; 6 kDa protein 1 (6K1); Cytoplasmic
            inclusion protein (EC 3.6.1.-) (CI); 6 kDa protein 2
            (6K2); Viral gen
          Length = 3255

 Score = 29.6 bits (65), Expect = 6.8
 Identities = 15/31 (48%), Positives = 19/31 (61%)
 Frame = -3

Query: 522  LPMEHAPSESWSASRTRVLSPAPLDLALAGE 430
            L  E  P E   A++TRV + APLD  LAG+
Sbjct: 2628 LKSELRPMEKVMANKTRVFTAAPLDTLLAGK 2658

>CD2_HORSE (P37998) T-cell surface antigen CD2 precursor|
          Length = 347

 Score = 29.6 bits (65), Expect = 6.8
 Identities = 23/71 (32%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
 Frame = +1

Query: 349 PPLAHR-RASGRLAVRRAVVGHHRPAVPLPRERQVQRRGREHPCPARGPALRRRVLHGQV 525
           PP +HR +A G    R  V GH     PLP   +VQ + ++ P P  G    ++     +
Sbjct: 279 PPPSHRPQAPGH---RPQVPGHR----PLPPGHRVQHQQQKRPAPTPGTQAHQQ-KGPPL 330

Query: 526 PHPRADHRPGR 558
           P PR   +P R
Sbjct: 331 PRPRVQPKPPR 341

>SRRM1_PONPY (Q5R5Q2) Serine/arginine repetitive matrix protein 1|
          Length = 917

 Score = 29.6 bits (65), Expect = 6.8
 Identities = 24/77 (31%), Positives = 30/77 (38%)
 Frame = +1

Query: 352 PLAHRRASGRLAVRRAVVGHHRPAVPLPRERQVQRRGREHPCPARGPALRRRVLHGQVPH 531
           P +  R+  R   R     H RP     R R      R  P P R P+ RRR    ++P 
Sbjct: 276 PRSRSRSKSRSRTRSRSPSHTRPR-RRHRSRSRSYSPRRRPSPRRRPSPRRRTPPRRMP- 333

Query: 532 PRADHRPGRDG*TQERR 582
           P   HR  R    + RR
Sbjct: 334 PPPRHRRSRSPVRRRRR 350

>HBP1B_WHEAT (P23923) Transcription factor HBP-1b(c38)|
          Length = 332

 Score = 29.6 bits (65), Expect = 6.8
 Identities = 22/98 (22%), Positives = 39/98 (39%), Gaps = 12/98 (12%)
 Frame = +2

Query: 299 LWYGNFKPAQKAVILDFLL------------SLTAEPQAASPSVAQWWGTIDQQYLSPAS 442
           LW G F+P++   +L   L            +L    Q A  +++Q    + Q      +
Sbjct: 188 LWLGGFRPSELLKLLSTQLEPLTEQQLSGICNLQQSSQQAEDALSQGMEALQQSLAETLA 247

Query: 443 AKSSGAGESTRVLLADQLSDGACSMGKSLTLEQITALA 556
                +G  +   +A+ +   A +MGK  TLE   + A
Sbjct: 248 GSIGSSGSGSTGNVANYMGQMAMAMGKLGTLENFLSQA 285

>PGBM_MOUSE (Q05793) Basement membrane-specific heparan sulfate proteoglycan core|
            protein precursor (HSPG) (Perlecan) (PLC)
          Length = 3707

 Score = 29.6 bits (65), Expect = 6.8
 Identities = 13/41 (31%), Positives = 20/41 (48%)
 Frame = -1

Query: 221  APCAASRPCKRVPRSQASPPREALPLHKRNAIPEHFVGCGC 99
            +P  + R C+R        P +  P H+   +PE  +GCGC
Sbjct: 1238 SPGHSGRHCERCAPGYYGNPSQGQPCHRDGQVPE-VLGCGC 1277

>ISPE_ANADE (Q2IM67) 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC|
           2.7.1.148) (CMK)
           (4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol
           kinase)
          Length = 313

 Score = 29.6 bits (65), Expect = 6.8
 Identities = 19/50 (38%), Positives = 23/50 (46%), Gaps = 14/50 (28%)
 Frame = -3

Query: 525 DLPMEHAPSESWSASRTRVLSPA---PLDLAL-----------AGERYCW 418
           D+P    P  +W+A R   LSPA   PLDL L           AG+ Y W
Sbjct: 136 DVPFFLGPGPAWAAGRGERLSPADVPPLDLVLVYPADPSLAIRAGDAYRW 185

>IBP3_PIG (P16611) Insulin-like growth factor-binding protein 3 precursor|
           (IGFBP-3) (IBP-3) (IGF-binding protein 3)
          Length = 293

 Score = 29.3 bits (64), Expect = 8.9
 Identities = 16/44 (36%), Positives = 19/44 (43%)
 Frame = -1

Query: 230 AGTAPCAASRPCKRVPRSQASPPREALPLHKRNAIPEHFVGCGC 99
           AGT P     PC     +Q +PP  A P  +    P    GCGC
Sbjct: 32  AGTGPVVRCEPCDARALAQCAPPPAAPPCAELVREP----GCGC 71

>PAQR9_HUMAN (Q6ZVX9) Progestin and adipoQ receptor family member 9 (Progestin|
           and adipoQ receptor family member IX)
          Length = 377

 Score = 29.3 bits (64), Expect = 8.9
 Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 12/68 (17%)
 Frame = -1

Query: 221 APCAASRPCKRVPRSQAS--PPREALPLHKRNAIPEHFVGC---GCGRRTECV------- 78
           AP  A+    R   S AS  PP  A PL + + +P+ FV C      RR  C        
Sbjct: 17  APAPAASGAARNSHSAASRDPPASAKPLLRWDEVPDDFVECFILSGYRRLPCTAQECLAS 76

Query: 77  *IKPTTET 54
            +KPT ET
Sbjct: 77  VLKPTNET 84

>CAPP_PSESM (Q886R9) Phosphoenolpyruvate carboxylase (EC 4.1.1.31) (PEPCase)|
           (PEPC)
          Length = 878

 Score = 29.3 bits (64), Expect = 8.9
 Identities = 24/99 (24%), Positives = 37/99 (37%), Gaps = 4/99 (4%)
 Frame = -3

Query: 558 AARAVICSRVRDLPMEHAPSESWSASRTRVLSPAPLDLALAG----ERYCWSMVPHHCAT 391
           A RA I SR++ L      +E+W     R + P P+D A  G    E   W  +P++   
Sbjct: 171 AERAQITSRLQRLI-----AEAWHTEEIRRIRPTPVDEAKWGFAVIEHSLWHAIPNYL-- 223

Query: 390 DGEAA*GSAVSERRKSRITAFCAGLKLPYQRTDTAMSPW 274
                       R+   +     GL LP +      + W
Sbjct: 224 ------------RKADHVLHAATGLHLPLESAPIRFASW 250

>ZDHC1_HUMAN (Q8WTX9) Probable palmitoyltransferase ZDHHC1 (EC 2.3.1.-) (Zinc|
           finger DHHC domain-containing protein 1) (DHHC-1) (Zinc
           finger protein 377) (DHHC-domain-containing
           cysteine-rich protein 1)
          Length = 485

 Score = 29.3 bits (64), Expect = 8.9
 Identities = 17/47 (36%), Positives = 20/47 (42%), Gaps = 9/47 (19%)
 Frame = -3

Query: 369 SAVSERRKSRITAFCAGLKLPYQRTDTAMSPWS---------TAPLW 256
           +A + RR  R  A C  L LP   T    SPW+          APLW
Sbjct: 417 AAPARRRIPRTPALCTPLALPAPTTRRRQSPWTRFQWRRRAWAAPLW 463


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 75,281,967
Number of Sequences: 219361
Number of extensions: 1541954
Number of successful extensions: 5155
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 4947
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5149
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 5158951200
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)