Clone Name | bart48b04 |
---|---|
Clone Library Name | barley_pub |
>dbj|AK100605.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023107G12, full insert sequence Length = 2461 Score = 375 bits (189), Expect = e-100 Identities = 324/369 (87%) Strand = Plus / Plus Query: 160 gcccctggcgtccgcctccgagtccgatcacaagtacaaaatttcagaaccagttaagct 219 |||||| || ||||||||||||||||| |||||||||||| | |||| | ||||| || Sbjct: 204 gcccctcgcttccgcctccgagtccgaccacaagtacaaagctgaagaaacggttaaact 263 Query: 220 ctgggtaaacaaggttggcccgtacaataatcctcaggaaacatacaactattacagcct 279 |||||||||||||||||||||||||||||| || || ||||| ||||||||||||||||| Sbjct: 264 ctgggtaaacaaggttggcccgtacaataacccgcaagaaacttacaactattacagcct 323 Query: 280 tccgttttgtcaaccagctgaaaaccctgcacataaatggggtggacttggagaggttct 339 || |||||||| ||| |||||||||| ||||| ||||||||||| || |||||||| || Sbjct: 324 cccattttgtcagccatctgaaaaccccgcacacaaatggggtggtctcggagaggtcct 383 Query: 340 gggtggaaatgagctgattgatagtcagattgatatacagtttttgaaaaatgtggacaa 399 || || ||||||||||| ||||||||| |||||||| ||||||| ||||||||||| || Sbjct: 384 tggcggcaatgagctgatcgatagtcaggttgatataaagtttttaaaaaatgtggagaa 443 Query: 400 gggccccgtttgcacaattgaacttgatgctaaaaaggttcagcaatttactgatgccat 459 ||| ||| ||||||||||||||||||||| || ||| |||| ||||||||||||||||| Sbjct: 444 gggtcccatttgcacaattgaacttgatgacaacaagattcaacaatttactgatgccat 503 Query: 460 tgaaagctcatactggtttgagcttttcatagatgatctgccattgtggggttttgttgg 519 |||||| ||||| |||||||| || |||||||||||||| ||||| |||||||||||||| Sbjct: 504 tgaaaggtcatattggtttgaactcttcatagatgatcttccattatggggttttgttgg 563 Query: 520 ggagactga 528 |||||||| Sbjct: 564 tgagactga 572
>dbj|AK069143.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023004K23, full insert sequence Length = 2132 Score = 349 bits (176), Expect = 6e-93 Identities = 311/356 (87%) Strand = Plus / Plus Query: 170 tccgcctccgagtccgatcacaagtacaaaatttcagaaccagttaagctctgggtaaac 229 |||||||||||||| || |||||||||||| || ||||||||||||||||||||| ||| Sbjct: 156 tccgcctccgagtcagaccacaagtacaaagttgaagaaccagttaagctctgggtgaac 215 Query: 230 aaggttggcccgtacaataatcctcaggaaacatacaactattacagccttccgttttgt 289 || || ||||| ||||||||||| || ||||| ||||||||| |||||||||| |||||| Sbjct: 216 aaagtcggcccttacaataatccacaagaaacttacaactatcacagccttccattttgt 275 Query: 290 caaccagctgaaaaccctgcacataaatggggtggacttggagaggttctgggtggaaat 349 |||||| |||| |||||||| |||||||||||||| ||||||||||| |||||||||||| Sbjct: 276 caaccatctgagaaccctgcgcataaatggggtggtcttggagaggtcctgggtggaaat 335 Query: 350 gagctgattgatagtcagattgatatacagtttttgaaaaatgtggacaagggccccgtt 409 ||||||||||||||||||||||| ||| |||| || | ||||| ||| | |||| || || Sbjct: 336 gagctgattgatagtcagattgacataaagttcttaagaaatgaggagaggggctccatt 395 Query: 410 tgcacaattgaacttgatgctaaaaaggttcagcaatttactgatgccattgaaagctca 469 || ||| |||| |||||| |||||||||||||||| || | ||||||||||| | |||| Sbjct: 396 tgtacacttgagcttgattctaaaaaggttcagcagttctccgatgccattgataactca 455 Query: 470 tactggtttgagcttttcatagatgatctgccattgtggggttttgttggggagac 525 |||||||| ||| ||||||| ||||||||||| | |||||||||||||||||||| Sbjct: 456 tactggttcgagtttttcatggatgatctgcctctttggggttttgttggggagac 511
>gb|BT018834.1| Zea mays clone EL01N0552D02.d mRNA sequence Length = 2172 Score = 347 bits (175), Expect = 2e-92 Identities = 313/359 (87%) Strand = Plus / Plus Query: 170 tccgcctccgagtccgatcacaagtacaaaatttcagaaccagttaagctctgggtaaac 229 ||||||||||||||||| ||||||||||||| | ||| ||||||||||| ||||| || Sbjct: 194 tccgcctccgagtccgaccacaagtacaaaactgaagagccagttaagctttgggtgaat 253 Query: 230 aaggttggcccgtacaataatcctcaggaaacatacaactattacagccttccgttttgt 289 || |||||||| |||||||||||||| ||||| |||||||||||||||||||| |||||| Sbjct: 254 aaagttggcccttacaataatcctcaagaaacctacaactattacagccttccattttgt 313 Query: 290 caaccagctgaaaaccctgcacataaatggggtggacttggagaggttctgggtggaaat 349 ||||| |||| ||||| |||||||||||||||| ||||||||||| || ||||||||| Sbjct: 314 caaccgtctgagaaccccacacataaatggggtggtcttggagaggtccttggtggaaat 373 Query: 350 gagctgattgatagtcagattgatatacagtttttgaaaaatgtggacaagggccccgtt 409 |||||||||||||||||| |||| ||| |||| || ||||| ||||| |||||| | || Sbjct: 374 gagctgattgatagtcagcttgaaataaagttcttaaaaaacgtggagaagggcttcatt 433 Query: 410 tgcacaattgaacttgatgctaaaaaggttcagcaatttactgatgccattgaaagctca 469 || ||| |||| ||||||||||||||||| ||||| ||| |||||||||||||||||||| Sbjct: 434 tgtacacttgagcttgatgctaaaaaggtccagcagtttgctgatgccattgaaagctca 493 Query: 470 tactggtttgagcttttcatagatgatctgccattgtggggttttgttggggagactga 528 || ||||| || |||| |||||||||||||| | |||||||||||||||||| |||| Sbjct: 494 tattggttcgaattttttatagatgatctgcctctttggggttttgttggggagtctga 552
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 226 bits (114), Expect = 6e-56 Identities = 171/190 (90%) Strand = Plus / Plus Query: 192 agtacaaaatttcagaaccagttaagctctgggtaaacaaggttggcccgtacaataatc 251 |||||||| || ||||||||||||||||||||| ||||| || ||||| |||||||||| Sbjct: 3855895 agtacaaagttgaagaaccagttaagctctgggtgaacaaagtcggcccttacaataatc 3855954 Query: 252 ctcaggaaacatacaactattacagccttccgttttgtcaaccagctgaaaaccctgcac 311 | || ||||| ||||||||| |||||||||| |||||||||||| |||| |||||||| | Sbjct: 3855955 cacaagaaacttacaactatcacagccttccattttgtcaaccatctgagaaccctgcgc 3856014 Query: 312 ataaatggggtggacttggagaggttctgggtggaaatgagctgattgatagtcagattg 371 ||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 3856015 ataaatggggtggtcttggagaggtcctgggtggaaatgagctgattgatagtcagattg 3856074 Query: 372 atatacagtt 381 | ||| |||| Sbjct: 3856075 acataaagtt 3856084 Score = 67.9 bits (34), Expect = 3e-08 Identities = 70/82 (85%) Strand = Plus / Plus Query: 408 tttgcacaattgaacttgatgctaaaaaggttcagcaatttactgatgccattgaaagct 467 |||| ||| |||| |||||| |||||||||||||||| || | ||||||||||| | || Sbjct: 3856227 tttgtacacttgagcttgattctaaaaaggttcagcagttctccgatgccattgataact 3856286 Query: 468 catactggtttgagcttttcat 489 |||||||||| ||| ||||||| Sbjct: 3856287 catactggttcgagtttttcat 3856308
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 226 bits (114), Expect = 6e-56 Identities = 171/190 (90%) Strand = Plus / Plus Query: 192 agtacaaaatttcagaaccagttaagctctgggtaaacaaggttggcccgtacaataatc 251 |||||||| || ||||||||||||||||||||| ||||| || ||||| |||||||||| Sbjct: 3855869 agtacaaagttgaagaaccagttaagctctgggtgaacaaagtcggcccttacaataatc 3855928 Query: 252 ctcaggaaacatacaactattacagccttccgttttgtcaaccagctgaaaaccctgcac 311 | || ||||| ||||||||| |||||||||| |||||||||||| |||| |||||||| | Sbjct: 3855929 cacaagaaacttacaactatcacagccttccattttgtcaaccatctgagaaccctgcgc 3855988 Query: 312 ataaatggggtggacttggagaggttctgggtggaaatgagctgattgatagtcagattg 371 ||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 3855989 ataaatggggtggtcttggagaggtcctgggtggaaatgagctgattgatagtcagattg 3856048 Query: 372 atatacagtt 381 | ||| |||| Sbjct: 3856049 acataaagtt 3856058 Score = 67.9 bits (34), Expect = 3e-08 Identities = 70/82 (85%) Strand = Plus / Plus Query: 408 tttgcacaattgaacttgatgctaaaaaggttcagcaatttactgatgccattgaaagct 467 |||| ||| |||| |||||| |||||||||||||||| || | ||||||||||| | || Sbjct: 3856201 tttgtacacttgagcttgattctaaaaaggttcagcagttctccgatgccattgataact 3856260 Query: 468 catactggtttgagcttttcat 489 |||||||||| ||| ||||||| Sbjct: 3856261 catactggttcgagtttttcat 3856282
>emb|AL732376.2|CNS08C8Z Oryza sativa chromosome 12, . BAC OSJNBa0086B10 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 152090 Score = 226 bits (114), Expect = 6e-56 Identities = 171/190 (90%) Strand = Plus / Plus Query: 192 agtacaaaatttcagaaccagttaagctctgggtaaacaaggttggcccgtacaataatc 251 |||||||| || ||||||||||||||||||||| ||||| || ||||| |||||||||| Sbjct: 17871 agtacaaagttgaagaaccagttaagctctgggtgaacaaagtcggcccttacaataatc 17930 Query: 252 ctcaggaaacatacaactattacagccttccgttttgtcaaccagctgaaaaccctgcac 311 | || ||||| ||||||||| |||||||||| |||||||||||| |||| |||||||| | Sbjct: 17931 cacaagaaacttacaactatcacagccttccattttgtcaaccatctgagaaccctgcgc 17990 Query: 312 ataaatggggtggacttggagaggttctgggtggaaatgagctgattgatagtcagattg 371 ||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 17991 ataaatggggtggtcttggagaggtcctgggtggaaatgagctgattgatagtcagattg 18050 Query: 372 atatacagtt 381 | ||| |||| Sbjct: 18051 acataaagtt 18060 Score = 67.9 bits (34), Expect = 3e-08 Identities = 70/82 (85%) Strand = Plus / Plus Query: 408 tttgcacaattgaacttgatgctaaaaaggttcagcaatttactgatgccattgaaagct 467 |||| ||| |||| |||||| |||||||||||||||| || | ||||||||||| | || Sbjct: 18203 tttgtacacttgagcttgattctaaaaaggttcagcagttctccgatgccattgataact 18262 Query: 468 catactggtttgagcttttcat 489 |||||||||| ||| ||||||| Sbjct: 18263 catactggttcgagtttttcat 18284
>gb|AC135794.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0084H09, complete sequence Length = 130151 Score = 184 bits (93), Expect = 2e-43 Identities = 153/173 (88%) Strand = Plus / Plus Query: 212 gttaagctctgggtaaacaaggttggcccgtacaataatcctcaggaaacatacaactat 271 ||||| |||||||||||||||||||||||||||||||| || || ||||| ||||||||| Sbjct: 31289 gttaaactctgggtaaacaaggttggcccgtacaataacccgcaagaaacttacaactat 31348 Query: 272 tacagccttccgttttgtcaaccagctgaaaaccctgcacataaatggggtggacttgga 331 |||||||| || |||||||| ||| |||||||||| ||||| ||||||||||| || ||| Sbjct: 31349 tacagcctcccattttgtcagccatctgaaaaccccgcacacaaatggggtggtctcgga 31408 Query: 332 gaggttctgggtggaaatgagctgattgatagtcagattgatatacagttttt 384 ||||| || || || ||||||||||| ||||||||| |||||||| ||||||| Sbjct: 31409 gaggtccttggcggcaatgagctgatcgatagtcaggttgatataaagttttt 31461 Score = 113 bits (57), Expect = 6e-22 Identities = 93/105 (88%) Strand = Plus / Plus Query: 387 aaaatgtggacaagggccccgtttgcacaattgaacttgatgctaaaaaggttcagcaat 446 |||||||||| ||||| ||| ||||||||||||||||||||| || ||| |||| |||| Sbjct: 31583 aaaatgtggagaagggtcccatttgcacaattgaacttgatgacaacaagattcaacaat 31642 Query: 447 ttactgatgccattgaaagctcatactggtttgagcttttcatag 491 ||||||||||||||||||| ||||| |||||||| || ||||||| Sbjct: 31643 ttactgatgccattgaaaggtcatattggtttgaactcttcatag 31687 Score = 44.1 bits (22), Expect = 0.46 Identities = 31/34 (91%) Strand = Plus / Plus Query: 160 gcccctggcgtccgcctccgagtccgatcacaag 193 |||||| || ||||||||||||||||| |||||| Sbjct: 29167 gcccctcgcttccgcctccgagtccgaccacaag 29200
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 184 bits (93), Expect = 2e-43 Identities = 153/173 (88%) Strand = Plus / Plus Query: 212 gttaagctctgggtaaacaaggttggcccgtacaataatcctcaggaaacatacaactat 271 ||||| |||||||||||||||||||||||||||||||| || || ||||| ||||||||| Sbjct: 4059627 gttaaactctgggtaaacaaggttggcccgtacaataacccgcaagaaacttacaactat 4059686 Query: 272 tacagccttccgttttgtcaaccagctgaaaaccctgcacataaatggggtggacttgga 331 |||||||| || |||||||| ||| |||||||||| ||||| ||||||||||| || ||| Sbjct: 4059687 tacagcctcccattttgtcagccatctgaaaaccccgcacacaaatggggtggtctcgga 4059746 Query: 332 gaggttctgggtggaaatgagctgattgatagtcagattgatatacagttttt 384 ||||| || || || ||||||||||| ||||||||| |||||||| ||||||| Sbjct: 4059747 gaggtccttggcggcaatgagctgatcgatagtcaggttgatataaagttttt 4059799 Score = 113 bits (57), Expect = 6e-22 Identities = 93/105 (88%) Strand = Plus / Plus Query: 387 aaaatgtggacaagggccccgtttgcacaattgaacttgatgctaaaaaggttcagcaat 446 |||||||||| ||||| ||| ||||||||||||||||||||| || ||| |||| |||| Sbjct: 4059921 aaaatgtggagaagggtcccatttgcacaattgaacttgatgacaacaagattcaacaat 4059980 Query: 447 ttactgatgccattgaaagctcatactggtttgagcttttcatag 491 ||||||||||||||||||| ||||| |||||||| || ||||||| Sbjct: 4059981 ttactgatgccattgaaaggtcatattggtttgaactcttcatag 4060025 Score = 44.1 bits (22), Expect = 0.46 Identities = 31/34 (91%) Strand = Plus / Plus Query: 160 gcccctggcgtccgcctccgagtccgatcacaag 193 |||||| || ||||||||||||||||| |||||| Sbjct: 4057505 gcccctcgcttccgcctccgagtccgaccacaag 4057538
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 184 bits (93), Expect = 2e-43 Identities = 153/173 (88%) Strand = Plus / Plus Query: 212 gttaagctctgggtaaacaaggttggcccgtacaataatcctcaggaaacatacaactat 271 ||||| |||||||||||||||||||||||||||||||| || || ||||| ||||||||| Sbjct: 4068321 gttaaactctgggtaaacaaggttggcccgtacaataacccgcaagaaacttacaactat 4068380 Query: 272 tacagccttccgttttgtcaaccagctgaaaaccctgcacataaatggggtggacttgga 331 |||||||| || |||||||| ||| |||||||||| ||||| ||||||||||| || ||| Sbjct: 4068381 tacagcctcccattttgtcagccatctgaaaaccccgcacacaaatggggtggtctcgga 4068440 Query: 332 gaggttctgggtggaaatgagctgattgatagtcagattgatatacagttttt 384 ||||| || || || ||||||||||| ||||||||| |||||||| ||||||| Sbjct: 4068441 gaggtccttggcggcaatgagctgatcgatagtcaggttgatataaagttttt 4068493 Score = 113 bits (57), Expect = 6e-22 Identities = 93/105 (88%) Strand = Plus / Plus Query: 387 aaaatgtggacaagggccccgtttgcacaattgaacttgatgctaaaaaggttcagcaat 446 |||||||||| ||||| ||| ||||||||||||||||||||| || ||| |||| |||| Sbjct: 4068615 aaaatgtggagaagggtcccatttgcacaattgaacttgatgacaacaagattcaacaat 4068674 Query: 447 ttactgatgccattgaaagctcatactggtttgagcttttcatag 491 ||||||||||||||||||| ||||| |||||||| || ||||||| Sbjct: 4068675 ttactgatgccattgaaaggtcatattggtttgaactcttcatag 4068719 Score = 44.1 bits (22), Expect = 0.46 Identities = 31/34 (91%) Strand = Plus / Plus Query: 160 gcccctggcgtccgcctccgagtccgatcacaag 193 |||||| || ||||||||||||||||| |||||| Sbjct: 4066199 gcccctcgcttccgcctccgagtccgaccacaag 4066232
>ref|XM_466169.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2240 Score = 135 bits (68), Expect = 2e-28 Identities = 248/308 (80%) Strand = Plus / Plus Query: 212 gttaagctctgggtaaacaaggttggcccgtacaataatcctcaggaaacatacaactat 271 |||| ||||||||| |||||||||||||||||||| || || |||||||| |||||||| Sbjct: 212 gttatgctctgggtgaacaaggttggcccgtacaacaacccacaggaaacttacaactac 271 Query: 272 tacagccttccgttttgtcaaccagctgaaaaccctgcacataaatggggtggacttgga 331 ||||||||||||||||| || || | | ||||| | ||||||||||| || ||||| Sbjct: 272 tacagccttccgttttgccatccgtccaataaccccgtgcataaatggggagggcttggg 331 Query: 332 gaggttctgggtggaaatgagctgattgatagtcagattgatatacagtttttgaaaaat 391 |||||||| |||||||||||||||||||| || ||||| || ||| ||||| | || Sbjct: 332 gaggttctcggtggaaatgagctgattgacagccagatcgacataaagtttggaagggat 391 Query: 392 gtggacaagggccccgtttgcacaattgaacttgatgctaaaaaggttcagcaatttact 451 || |||||||| || |||| |||||||||||||| || | |||| | || || || Sbjct: 392 gttgacaagggtaccatttgttcaattgaacttgatcctgacaaggccaaacagttatct 451 Query: 452 gatgccattgaaagctcatactggtttgagcttttcatagatgatctgccattgtggggt 511 ||||| ||||| || ||||| |||||||| | ||||| |||||| |||| | |||||| Sbjct: 452 gatgcgattgagagttcatattggtttgaattcttcattgatgatttgcctctatggggt 511 Query: 512 tttgttgg 519 |||||||| Sbjct: 512 tttgttgg 519
>ref|XM_506821.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1004_H01.22 mRNA Length = 2266 Score = 135 bits (68), Expect = 2e-28 Identities = 248/308 (80%) Strand = Plus / Plus Query: 212 gttaagctctgggtaaacaaggttggcccgtacaataatcctcaggaaacatacaactat 271 |||| ||||||||| |||||||||||||||||||| || || |||||||| |||||||| Sbjct: 238 gttatgctctgggtgaacaaggttggcccgtacaacaacccacaggaaacttacaactac 297 Query: 272 tacagccttccgttttgtcaaccagctgaaaaccctgcacataaatggggtggacttgga 331 ||||||||||||||||| || || | | ||||| | ||||||||||| || ||||| Sbjct: 298 tacagccttccgttttgccatccgtccaataaccccgtgcataaatggggagggcttggg 357 Query: 332 gaggttctgggtggaaatgagctgattgatagtcagattgatatacagtttttgaaaaat 391 |||||||| |||||||||||||||||||| || ||||| || ||| ||||| | || Sbjct: 358 gaggttctcggtggaaatgagctgattgacagccagatcgacataaagtttggaagggat 417 Query: 392 gtggacaagggccccgtttgcacaattgaacttgatgctaaaaaggttcagcaatttact 451 || |||||||| || |||| |||||||||||||| || | |||| | || || || Sbjct: 418 gttgacaagggtaccatttgttcaattgaacttgatcctgacaaggccaaacagttatct 477 Query: 452 gatgccattgaaagctcatactggtttgagcttttcatagatgatctgccattgtggggt 511 ||||| ||||| || ||||| |||||||| | ||||| |||||| |||| | |||||| Sbjct: 478 gatgcgattgagagttcatattggtttgaattcttcattgatgatttgcctctatggggt 537 Query: 512 tttgttgg 519 |||||||| Sbjct: 538 tttgttgg 545
>dbj|AK099161.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023068L16, full insert sequence Length = 2240 Score = 135 bits (68), Expect = 2e-28 Identities = 248/308 (80%) Strand = Plus / Plus Query: 212 gttaagctctgggtaaacaaggttggcccgtacaataatcctcaggaaacatacaactat 271 |||| ||||||||| |||||||||||||||||||| || || |||||||| |||||||| Sbjct: 212 gttatgctctgggtgaacaaggttggcccgtacaacaacccacaggaaacttacaactac 271 Query: 272 tacagccttccgttttgtcaaccagctgaaaaccctgcacataaatggggtggacttgga 331 ||||||||||||||||| || || | | ||||| | ||||||||||| || ||||| Sbjct: 272 tacagccttccgttttgccatccgtccaataaccccgtgcataaatggggagggcttggg 331 Query: 332 gaggttctgggtggaaatgagctgattgatagtcagattgatatacagtttttgaaaaat 391 |||||||| |||||||||||||||||||| || ||||| || ||| ||||| | || Sbjct: 332 gaggttctcggtggaaatgagctgattgacagccagatcgacataaagtttggaagggat 391 Query: 392 gtggacaagggccccgtttgcacaattgaacttgatgctaaaaaggttcagcaatttact 451 || |||||||| || |||| |||||||||||||| || | |||| | || || || Sbjct: 392 gttgacaagggtaccatttgttcaattgaacttgatcctgacaaggccaaacagttatct 451 Query: 452 gatgccattgaaagctcatactggtttgagcttttcatagatgatctgccattgtggggt 511 ||||| ||||| || ||||| |||||||| | ||||| |||||| |||| | |||||| Sbjct: 452 gatgcgattgagagttcatattggtttgaattcttcattgatgatttgcctctatggggt 511 Query: 512 tttgttgg 519 |||||||| Sbjct: 512 tttgttgg 519
>dbj|AK067736.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013117E08, full insert sequence Length = 2265 Score = 135 bits (68), Expect = 2e-28 Identities = 248/308 (80%) Strand = Plus / Plus Query: 212 gttaagctctgggtaaacaaggttggcccgtacaataatcctcaggaaacatacaactat 271 |||| ||||||||| |||||||||||||||||||| || || |||||||| |||||||| Sbjct: 237 gttatgctctgggtgaacaaggttggcccgtacaacaacccacaggaaacttacaactac 296 Query: 272 tacagccttccgttttgtcaaccagctgaaaaccctgcacataaatggggtggacttgga 331 ||||||||||||||||| || || | | ||||| | ||||||||||| || ||||| Sbjct: 297 tacagccttccgttttgccatccgtccaataaccccgtgcataaatggggagggcttggg 356 Query: 332 gaggttctgggtggaaatgagctgattgatagtcagattgatatacagtttttgaaaaat 391 |||||||| |||||||||||||||||||| || ||||| || ||| ||||| | || Sbjct: 357 gaggttctcggtggaaatgagctgattgacagccagatcgacataaagtttggaagggat 416 Query: 392 gtggacaagggccccgtttgcacaattgaacttgatgctaaaaaggttcagcaatttact 451 || |||||||| || |||| |||||||||||||| || | |||| | || || || Sbjct: 417 gttgacaagggtaccatttgttcaattgaacttgatcctgacaaggccaaacagttatct 476 Query: 452 gatgccattgaaagctcatactggtttgagcttttcatagatgatctgccattgtggggt 511 ||||| ||||| || ||||| |||||||| | ||||| |||||| |||| | |||||| Sbjct: 477 gatgcgattgagagttcatattggtttgaattcttcattgatgatttgcctctatggggt 536 Query: 512 tttgttgg 519 |||||||| Sbjct: 537 tttgttgg 544
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 133 bits (67), Expect = 6e-28 Identities = 145/171 (84%) Strand = Plus / Plus Query: 212 gttaagctctgggtaaacaaggttggcccgtacaataatcctcaggaaacatacaactat 271 |||| ||||||||| |||||||||||||||||||| || || |||||||| |||||||| Sbjct: 20831516 gttatgctctgggtgaacaaggttggcccgtacaacaacccacaggaaacttacaactac 20831575 Query: 272 tacagccttccgttttgtcaaccagctgaaaaccctgcacataaatggggtggacttgga 331 ||||||||||||||||| || || | | ||||| | ||||||||||| || ||||| Sbjct: 20831576 tacagccttccgttttgccatccgtccaataaccccgtgcataaatggggagggcttggg 20831635 Query: 332 gaggttctgggtggaaatgagctgattgatagtcagattgatatacagttt 382 |||||||| |||||||||||||||||||| || ||||| || ||| ||||| Sbjct: 20831636 gaggttctcggtggaaatgagctgattgacagccagatcgacataaagttt 20831686
>dbj|AP004038.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1004_H01 Length = 121377 Score = 133 bits (67), Expect = 6e-28 Identities = 145/171 (84%) Strand = Plus / Plus Query: 212 gttaagctctgggtaaacaaggttggcccgtacaataatcctcaggaaacatacaactat 271 |||| ||||||||| |||||||||||||||||||| || || |||||||| |||||||| Sbjct: 73977 gttatgctctgggtgaacaaggttggcccgtacaacaacccacaggaaacttacaactac 74036 Query: 272 tacagccttccgttttgtcaaccagctgaaaaccctgcacataaatggggtggacttgga 331 ||||||||||||||||| || || | | ||||| | ||||||||||| || ||||| Sbjct: 74037 tacagccttccgttttgccatccgtccaataaccccgtgcataaatggggagggcttggg 74096 Query: 332 gaggttctgggtggaaatgagctgattgatagtcagattgatatacagttt 382 |||||||| |||||||||||||||||||| || ||||| || ||| ||||| Sbjct: 74097 gaggttctcggtggaaatgagctgattgacagccagatcgacataaagttt 74147
>ref|NM_100970.2| Arabidopsis thaliana transporter AT1G10950 mRNA, complete cds Length = 2238 Score = 109 bits (55), Expect = 9e-21 Identities = 127/151 (84%) Strand = Plus / Plus Query: 221 tgggtaaacaaggttggcccgtacaataatcctcaggaaacatacaactattacagcctt 280 ||||||||||| |||||||| || || ||||| || |||||||||||||||||||| ||| Sbjct: 224 tgggtaaacaaagttggcccatataacaatccacaagaaacatacaactattacagtctt 283 Query: 281 ccgttttgtcaaccagctgaaaaccctgcacataaatggggtggacttggagaggttctg 340 || ||||| | ||| ||| |||| || || ||||||||||| ||||| || ||||| Sbjct: 284 ccattttgccgcccatctggaaacaatgttcacaaatggggtggtcttggtgaagttcta 343 Query: 341 ggtggaaatgagctgattgatagtcagattg 371 |||||||||||||||||||| ||| |||||| Sbjct: 344 ggtggaaatgagctgattgacagtgagattg 374
>gb|AY063907.1| Arabidopsis thaliana putative endomembrane protein EMP70 precusor isolog (At1g10950) mRNA, complete cds Length = 2113 Score = 109 bits (55), Expect = 9e-21 Identities = 127/151 (84%) Strand = Plus / Plus Query: 221 tgggtaaacaaggttggcccgtacaataatcctcaggaaacatacaactattacagcctt 280 ||||||||||| |||||||| || || ||||| || |||||||||||||||||||| ||| Sbjct: 201 tgggtaaacaaagttggcccatataacaatccacaagaaacatacaactattacagtctt 260 Query: 281 ccgttttgtcaaccagctgaaaaccctgcacataaatggggtggacttggagaggttctg 340 || ||||| | ||| ||| |||| || || ||||||||||| ||||| || ||||| Sbjct: 261 ccattttgccgcccatctggaaacaatgttcacaaatggggtggtcttggtgaagttcta 320 Query: 341 ggtggaaatgagctgattgatagtcagattg 371 |||||||||||||||||||| ||| |||||| Sbjct: 321 ggtggaaatgagctgattgacagtgagattg 351
>gb|BT008600.1| Arabidopsis thaliana clone U11293 putative endomembrane protein 70 (At1g10950) mRNA, complete cds Length = 1966 Score = 109 bits (55), Expect = 9e-21 Identities = 127/151 (84%) Strand = Plus / Plus Query: 221 tgggtaaacaaggttggcccgtacaataatcctcaggaaacatacaactattacagcctt 280 ||||||||||| |||||||| || || ||||| || |||||||||||||||||||| ||| Sbjct: 118 tgggtaaacaaagttggcccatataacaatccacaagaaacatacaactattacagtctt 177 Query: 281 ccgttttgtcaaccagctgaaaaccctgcacataaatggggtggacttggagaggttctg 340 || ||||| | ||| ||| |||| || || ||||||||||| ||||| || ||||| Sbjct: 178 ccattttgccgcccatctggaaacaatgttcacaaatggggtggtcttggtgaagttcta 237 Query: 341 ggtggaaatgagctgattgatagtcagattg 371 |||||||||||||||||||| ||| |||||| Sbjct: 238 ggtggaaatgagctgattgacagtgagattg 268
>gb|AY081536.1| Arabidopsis thaliana endomembrane protein EMP70 precusor isolog (At1g10950) mRNA, complete cds Length = 1888 Score = 109 bits (55), Expect = 9e-21 Identities = 127/151 (84%) Strand = Plus / Plus Query: 221 tgggtaaacaaggttggcccgtacaataatcctcaggaaacatacaactattacagcctt 280 ||||||||||| |||||||| || || ||||| || |||||||||||||||||||| ||| Sbjct: 118 tgggtaaacaaagttggcccatataacaatccacaagaaacatacaactattacagtctt 177 Query: 281 ccgttttgtcaaccagctgaaaaccctgcacataaatggggtggacttggagaggttctg 340 || ||||| | ||| ||| |||| || || ||||||||||| ||||| || ||||| Sbjct: 178 ccattttgccgcccatctggaaacaatgttcacaaatggggtggtcttggtgaagttcta 237 Query: 341 ggtggaaatgagctgattgatagtcagattg 371 |||||||||||||||||||| ||| |||||| Sbjct: 238 ggtggaaatgagctgattgacagtgagattg 268
>gb|AF446365.1|AF446365 Arabidopsis thaliana At1g10950/T19D16_13 mRNA, complete cds Length = 2094 Score = 109 bits (55), Expect = 9e-21 Identities = 127/151 (84%) Strand = Plus / Plus Query: 221 tgggtaaacaaggttggcccgtacaataatcctcaggaaacatacaactattacagcctt 280 ||||||||||| |||||||| || || ||||| || |||||||||||||||||||| ||| Sbjct: 224 tgggtaaacaaagttggcccatataacaatccacaagaaacatacaactattacagtctt 283 Query: 281 ccgttttgtcaaccagctgaaaaccctgcacataaatggggtggacttggagaggttctg 340 || ||||| | ||| ||| |||| || || ||||||||||| ||||| || ||||| Sbjct: 284 ccattttgccgcccatctggaaacaatgttcacaaatggggtggtcttggtgaagttcta 343 Query: 341 ggtggaaatgagctgattgatagtcagattg 371 |||||||||||||||||||| ||| |||||| Sbjct: 344 ggtggaaatgagctgattgacagtgagattg 374
>gb|AY054666.1| Arabidopsis thaliana endomembrane protein EMP70 precusor isolog (At1g10950; T19D16.13) mRNA, complete cds Length = 2062 Score = 109 bits (55), Expect = 9e-21 Identities = 127/151 (84%) Strand = Plus / Plus Query: 221 tgggtaaacaaggttggcccgtacaataatcctcaggaaacatacaactattacagcctt 280 ||||||||||| |||||||| || || ||||| || |||||||||||||||||||| ||| Sbjct: 177 tgggtaaacaaagttggcccatataacaatccacaagaaacatacaactattacagtctt 236 Query: 281 ccgttttgtcaaccagctgaaaaccctgcacataaatggggtggacttggagaggttctg 340 || ||||| | ||| ||| |||| || || ||||||||||| ||||| || ||||| Sbjct: 237 ccattttgccgcccatctggaaacaatgttcacaaatggggtggtcttggtgaagttcta 296 Query: 341 ggtggaaatgagctgattgatagtcagattg 371 |||||||||||||||||||| ||| |||||| Sbjct: 297 ggtggaaatgagctgattgacagtgagattg 327
>gb|U95973.1|U95973 Arabidopsis thaliana chromosome 1 BAC T19D16 genomic sequence, complete sequence Length = 115641 Score = 109 bits (55), Expect = 9e-21 Identities = 127/151 (84%) Strand = Plus / Minus Query: 221 tgggtaaacaaggttggcccgtacaataatcctcaggaaacatacaactattacagcctt 280 ||||||||||| |||||||| || || ||||| || |||||||||||||||||||| ||| Sbjct: 67634 tgggtaaacaaagttggcccatataacaatccacaagaaacatacaactattacagtctt 67575 Query: 281 ccgttttgtcaaccagctgaaaaccctgcacataaatggggtggacttggagaggttctg 340 || ||||| | ||| ||| |||| || || ||||||||||| ||||| || ||||| Sbjct: 67574 ccattttgccgcccatctggaaacaatgttcacaaatggggtggtcttggtgaagttcta 67515 Query: 341 ggtggaaatgagctgattgatagtcagattg 371 |||||||||||||||||||| ||| |||||| Sbjct: 67514 ggtggaaatgagctgattgacagtgagattg 67484
>gb|AC134322.25| Medicago truncatula clone mth2-17i21, complete sequence Length = 136954 Score = 63.9 bits (32), Expect = 5e-07 Identities = 59/68 (86%) Strand = Plus / Plus Query: 221 tgggtaaacaaggttggcccgtacaataatcctcaggaaacatacaactattacagcctt 280 ||||| ||||| || || ||||||||||||||||| |||||||| || ||||||||||| Sbjct: 61849 tgggtcaacaaagtaggtccgtacaataatcctcaagaaacatataattattacagcctg 61908 Query: 281 ccgttttg 288 || ||||| Sbjct: 61909 ccattttg 61916
>gb|AC153000.5| Medicago truncatula clone mth2-94c2, complete sequence Length = 97390 Score = 60.0 bits (30), Expect = 8e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 306 ctgcacataaatggggtggacttggagaggttctgggtggaaatga 351 ||||||| ||||||||||| ||||| |||||||||||||| ||||| Sbjct: 7619 ctgcacacaaatggggtggtcttggtgaggttctgggtggcaatga 7664
>gb|AY020119.1| Oryza sativa microsatellite MRG2444 containing (CT)X19, genomic sequence Length = 238 Score = 44.1 bits (22), Expect = 0.46 Identities = 31/34 (91%) Strand = Plus / Plus Query: 160 gcccctggcgtccgcctccgagtccgatcacaag 193 |||||| || ||||||||||||||||| |||||| Sbjct: 40 gcccctcgcttccgcctccgagtccgaccacaag 73
>gb|AY017991.1| Oryza sativa microsatellite MRG0316 containing (AG)X19, genomic sequence Length = 238 Score = 44.1 bits (22), Expect = 0.46 Identities = 31/34 (91%) Strand = Plus / Minus Query: 160 gcccctggcgtccgcctccgagtccgatcacaag 193 |||||| || ||||||||||||||||| |||||| Sbjct: 199 gcccctcgcttccgcctccgagtccgaccacaag 166
>gb|AC109515.6| Homo sapiens chromosome 17, clone CTD-2503K16, complete sequence Length = 144448 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 316 atggggtggacttggagaggtt 337 |||||||||||||||||||||| Sbjct: 97682 atggggtggacttggagaggtt 97703
>gb|AC087164.9| Homo sapiens chromosome 17, clone RP11-258F1, complete sequence Length = 164429 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 316 atggggtggacttggagaggtt 337 |||||||||||||||||||||| Sbjct: 48394 atggggtggacttggagaggtt 48415
>gb|AC152159.6| Mus musculus chromosome 15, clone RP23-10O8, complete sequence Length = 217045 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Plus Query: 374 atacagtttttgaaaaatgtggacaa 399 ||||||| |||||||||||||||||| Sbjct: 92886 atacagtatttgaaaaatgtggacaa 92911
>gb|AF051976.2|AF051976 Homo sapiens unconventional myosin (MYO15) gene, partial sequence Length = 95255 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 316 atggggtggacttggagaggtt 337 |||||||||||||||||||||| Sbjct: 49811 atggggtggacttggagaggtt 49790
>gb|AC009708.11| Homo sapiens chromosome 8, clone RP11-318G5, complete sequence Length = 220215 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 189 acaagtacaaaatttcagaaccagt 213 |||| |||||||||||||||||||| Sbjct: 28807 acaaatacaaaatttcagaaccagt 28783
>gb|AC026723.5|AC026723 Homo sapiens chromosome 5 clone CTD-2209N14, complete sequence Length = 131999 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 370 tgatatacagtttttgaaaaatgtggaca 398 ||||||||| |||| |||||||||||||| Sbjct: 101170 tgatatacacttttggaaaaatgtggaca 101142
>dbj|AP002981.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1167D1 Length = 166666 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 189 acaagtacaaaatttcagaaccagt 213 |||| |||||||||||||||||||| Sbjct: 3752 acaaatacaaaatttcagaaccagt 3776
>dbj|AP002907.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB431C1 Length = 98146 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 189 acaagtacaaaatttcagaaccagt 213 |||| |||||||||||||||||||| Sbjct: 90791 acaaatacaaaatttcagaaccagt 90815
>gb|AY795482.1| Homo sapiens DnaJ (Hsp40) homolog, subfamily C, member 3 (DNAJC3) gene, complete cds Length = 117695 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 372 atatacagtttttgaaaaat 391 |||||||||||||||||||| Sbjct: 89351 atatacagtttttgaaaaat 89370
>gb|CP000017.1| Streptococcus pyogenes MGAS5005, complete genome Length = 1838554 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 462 aaagctcatactggtttgagcttt 485 ||||| |||||||||||||||||| Sbjct: 1711425 aaagcccatactggtttgagcttt 1711402
>gb|CP000003.1| Streptococcus pyogenes MGAS10394, complete genome Length = 1899877 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 462 aaagctcatactggtttgagcttt 485 ||||| |||||||||||||||||| Sbjct: 1758665 aaagcccatactggtttgagcttt 1758642
>gb|AE006626.1| Streptococcus pyogenes M1 GAS, section 155 of 167 of the complete genome Length = 10069 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 462 aaagctcatactggtttgagcttt 485 ||||| |||||||||||||||||| Sbjct: 5170 aaagcccatactggtttgagcttt 5147
>gb|CP000262.1| Streptococcus pyogenes MGAS10750, complete genome Length = 1937111 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 462 aaagctcatactggtttgagcttt 485 ||||| |||||||||||||||||| Sbjct: 1802659 aaagcccatactggtttgagcttt 1802636
>gb|CP000261.1| Streptococcus pyogenes MGAS2096, complete genome Length = 1860355 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 462 aaagctcatactggtttgagcttt 485 ||||| |||||||||||||||||| Sbjct: 1735929 aaagcccatactggtttgagcttt 1735906
>gb|CP000260.1| Streptococcus pyogenes MGAS10270, complete genome Length = 1928252 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 462 aaagctcatactggtttgagcttt 485 ||||| |||||||||||||||||| Sbjct: 1774095 aaagcccatactggtttgagcttt 1774072
>gb|CP000259.1| Streptococcus pyogenes MGAS9429, complete genome Length = 1836467 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 462 aaagctcatactggtttgagcttt 485 ||||| |||||||||||||||||| Sbjct: 1712052 aaagcccatactggtttgagcttt 1712029
>gb|AC124174.4| Mus musculus BAC clone RP23-181O22 from chromosome 3, complete sequence Length = 197553 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 382 tttgaaaaatgtggacaagg 401 |||||||||||||||||||| Sbjct: 34393 tttgaaaaatgtggacaagg 34374
>gb|AC004890.2| Homo sapiens PAC clone RP4-800G7 from 7, complete sequence Length = 164028 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 299 gaaaaccctgcacataaatg 318 |||||||||||||||||||| Sbjct: 107048 gaaaaccctgcacataaatg 107067
>gb|AC109214.6| Mus musculus chromosome 10, clone RP23-352E22, complete sequence Length = 175569 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 368 attgatatacagtttttgaaaaat 391 ||||| |||||||||||||||||| Sbjct: 23579 attgaaatacagtttttgaaaaat 23602
>emb|AL138955.14| Human DNA sequence from clone RP11-10E18 on chromosome 13 Contains the 5' UTR of the gene for novel zinc-finger protein (DZIP1, KIAA0996), the 3' end of the DNAJC3 gene for DnaJ (Hsp40) homolog, subfamily C, member 3, a pseudogene similar to part of NADH dehydrogenase 5 (MTND5) , a novel cytochrome B pseudogene, a NADH dehydrogenase 6 (MTND6) pseudogene and 4 CpG islands, complete sequence Length = 149704 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 372 atatacagtttttgaaaaat 391 |||||||||||||||||||| Sbjct: 121101 atatacagtttttgaaaaat 121120
>emb|BX649520.20| Zebrafish DNA sequence from clone DKEY-174E3 in linkage group 13, complete sequence Length = 219709 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 189 acaagtacaaaatttcagaa 208 |||||||||||||||||||| Sbjct: 131825 acaagtacaaaatttcagaa 131806
>gb|AC117482.4| Homo sapiens 3 BAC RP11-651J20 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 171333 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 298 tgaaaaccctgcacataaatggggtgga 325 ||||||||||||||||| ||||||||| Sbjct: 109587 tgaaaaccctgcacatagctggggtgga 109560
>gb|AC148926.4| Pan troglodytes BAC clone RP43-136P16 from chromosome 7, complete sequence Length = 178320 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 299 gaaaaccctgcacataaatg 318 |||||||||||||||||||| Sbjct: 148039 gaaaaccctgcacataaatg 148020
>gb|AE010114.1| Streptococcus pyogenes strain MGAS8232, section 162 of 173 of the complete genome Length = 10029 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 462 aaagctcatactggtttgagcttt 485 ||||| |||||||||||||||||| Sbjct: 1002 aaagcccatactggtttgagcttt 979
>gb|AC034213.5|AC034213 Homo sapiens chromosome 5 clone CTC-573N18, complete sequence Length = 150179 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 332 gaggttctgggtggaaatga 351 |||||||||||||||||||| Sbjct: 27075 gaggttctgggtggaaatga 27094
>gb|AC087738.13| Homo sapiens chromosome 15, clone RP11-365F16, complete sequence Length = 181511 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 431 aaaaaggttcagcaatttac 450 |||||||||||||||||||| Sbjct: 77030 aaaaaggttcagcaatttac 77049
>gb|AE014074.1| Streptococcus pyogenes MGAS315, complete genome Length = 1900521 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 462 aaagctcatactggtttgagcttt 485 ||||| |||||||||||||||||| Sbjct: 1775875 aaagcccatactggtttgagcttt 1775852
>gb|AC078991.21| Homo sapiens Xp BAC RP11-459A10 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 169819 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 381 ttttgaaaaatgtggacaag 400 |||||||||||||||||||| Sbjct: 9287 ttttgaaaaatgtggacaag 9306
>dbj|BA000034.2| Streptococcus pyogenes SSI-1 DNA, complete genome Length = 1894275 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 462 aaagctcatactggtttgagcttt 485 ||||| |||||||||||||||||| Sbjct: 1769661 aaagcccatactggtttgagcttt 1769638
>emb|BX005431.3| Zebrafish DNA sequence from clone CH211-214G2 in linkage group 2, complete sequence Length = 200591 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 458 attgaaagctcatactggtt 477 |||||||||||||||||||| Sbjct: 185570 attgaaagctcatactggtt 185589
>gb|AC115895.9| Mus musculus chromosome 5, clone RP24-443E20, complete sequence Length = 174073 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 294 cagctgaaaaccctgcacat 313 |||||||||||||||||||| Sbjct: 60097 cagctgaaaaccctgcacat 60116 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,854,193 Number of Sequences: 3902068 Number of extensions: 3854193 Number of successful extensions: 79653 Number of sequences better than 10.0: 57 Number of HSP's better than 10.0 without gapping: 57 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 79330 Number of HSP's gapped (non-prelim): 315 length of query: 533 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 510 effective length of database: 17,143,297,704 effective search space: 8743081829040 effective search space used: 8743081829040 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)