ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart48b01
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1IPMK_RAT (Q99NI4) Inositol polyphosphate multikinase (EC 2.7.1.1... 32 1.4
2IPMK_MOUSE (Q7TT16) Inositol polyphosphate multikinase (EC 2.7.1... 32 1.4
3IPMK_HUMAN (Q8NFU5) Inositol polyphosphate multikinase (EC 2.7.1... 32 1.4

>IPMK_RAT (Q99NI4) Inositol polyphosphate multikinase (EC 2.7.1.151)|
           (Inositol 1,3,4,6-tetrakisphosphate 5-kinase)
          Length = 396

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 15/39 (38%), Positives = 23/39 (58%)
 Frame = -1

Query: 269 GEVAVPDEVDGDAAGEERALVVLHGDGRVLHQRREPPRG 153
           G V +  +V G   G+++  ++ H DG VL Q + PPRG
Sbjct: 28  GCVPLSHQVAGHMYGKDKVGILQHPDGTVLKQLQPPPRG 66



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>IPMK_MOUSE (Q7TT16) Inositol polyphosphate multikinase (EC 2.7.1.151)|
           (Inositol 1,3,4,6-tetrakisphosphate 5-kinase)
          Length = 396

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 15/39 (38%), Positives = 23/39 (58%)
 Frame = -1

Query: 269 GEVAVPDEVDGDAAGEERALVVLHGDGRVLHQRREPPRG 153
           G V +  +V G   G+++  ++ H DG VL Q + PPRG
Sbjct: 28  GCVPLSHQVAGHMYGKDKVGILQHPDGTVLKQLQPPPRG 66



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>IPMK_HUMAN (Q8NFU5) Inositol polyphosphate multikinase (EC 2.7.1.151)|
           (Inositol 1,3,4,6-tetrakisphosphate 5-kinase)
          Length = 416

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 15/39 (38%), Positives = 23/39 (58%)
 Frame = -1

Query: 269 GEVAVPDEVDGDAAGEERALVVLHGDGRVLHQRREPPRG 153
           G V +  +V G   G+++  ++ H DG VL Q + PPRG
Sbjct: 45  GCVPLSHQVAGHMYGKDKVGILQHPDGTVLKQLQPPPRG 83


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 35,805,582
Number of Sequences: 219361
Number of extensions: 460104
Number of successful extensions: 1599
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1572
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1599
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 5158951200
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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