Clone Name | bart48a06 |
---|---|
Clone Library Name | barley_pub |
>gb|AC154317.2| Mus musculus BAC clone RP23-346H4 from chromosome 13, complete sequence Length = 205164 Score = 42.1 bits (21), Expect = 0.42 Identities = 21/21 (100%) Strand = Plus / Minus Query: 60 cttatgaccaacaattcaagg 80 ||||||||||||||||||||| Sbjct: 98174 cttatgaccaacaattcaagg 98154
>gb|AY294226.1| Uncultured bacterium cosmid gbiox603r, complete sequence Length = 40150 Score = 38.2 bits (19), Expect = 6.5 Identities = 22/23 (95%) Strand = Plus / Plus Query: 97 gatcgtgcaagagctggtaggcg 119 ||||||||||||||||| ||||| Sbjct: 38499 gatcgtgcaagagctggaaggcg 38521
>gb|AF117829.3| Homo sapiens chromosome 8 multiple clones map q21.3, complete sequence Length = 320187 Score = 38.2 bits (19), Expect = 6.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 14 tggaagctcaatataccaa 32 ||||||||||||||||||| Sbjct: 285874 tggaagctcaatataccaa 285892
>gb|AC008958.7| Homo sapiens chromosome 5 clone CTD-2353N24, complete sequence Length = 109526 Score = 38.2 bits (19), Expect = 6.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 109 gctggtaggcgccggcgtg 127 ||||||||||||||||||| Sbjct: 60565 gctggtaggcgccggcgtg 60547
>dbj|AP006436.1| Sus scrofa CC chemokine receptor genes(CCR3, CCR1, CCXCR1, FYCO1), complete and partial cds, clone: 0659A02 Length = 167298 Score = 38.2 bits (19), Expect = 6.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 42 agcaagcaaccatggcttc 60 ||||||||||||||||||| Sbjct: 37312 agcaagcaaccatggcttc 37330
>gb|AC074178.1|AC074178 Homo sapiens PAC clone RP5-1098O20 from 8, complete sequence Length = 107549 Score = 38.2 bits (19), Expect = 6.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 14 tggaagctcaatataccaa 32 ||||||||||||||||||| Sbjct: 29850 tggaagctcaatataccaa 29868
>gb|AC007591.2|F9L1 Arabidopsis thaliana chromosome 1 BAC F9L1 sequence, complete sequence Length = 141984 Score = 38.2 bits (19), Expect = 6.5 Identities = 22/23 (95%) Strand = Plus / Minus Query: 35 ctctaacagcaagcaaccatggc 57 ||||| ||||||||||||||||| Sbjct: 104274 ctctaccagcaagcaaccatggc 104252
>emb|AL158801.4|CNS01RGN Human chromosome 14 DNA sequence BAC R-665C16 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 205860 Score = 38.2 bits (19), Expect = 6.5 Identities = 22/23 (95%) Strand = Plus / Minus Query: 43 gcaagcaaccatggcttcttatg 65 |||||||| |||||||||||||| Sbjct: 173476 gcaagcaaacatggcttcttatg 173454
>emb|AL139316.5|CNS01DXH Human chromosome 14 DNA sequence BAC R-698F20 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 192440 Score = 38.2 bits (19), Expect = 6.5 Identities = 22/23 (95%) Strand = Plus / Minus Query: 43 gcaagcaaccatggcttcttatg 65 |||||||| |||||||||||||| Sbjct: 19876 gcaagcaaacatggcttcttatg 19854
>gb|AF069291.1|AF069291 Homo sapiens BAC clone 255A7 from 8q21 containing NBS1 gene, complete sequence Length = 184919 Score = 38.2 bits (19), Expect = 6.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 14 tggaagctcaatataccaa 32 ||||||||||||||||||| Sbjct: 55607 tggaagctcaatataccaa 55625
>emb|AL808131.9| Mouse DNA sequence from clone RP23-367H7 on chromosome X, complete sequence Length = 210322 Score = 38.2 bits (19), Expect = 6.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 43 gcaagcaaccatggcttct 61 ||||||||||||||||||| Sbjct: 111651 gcaagcaaccatggcttct 111669 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 774,805 Number of Sequences: 3902068 Number of extensions: 774805 Number of successful extensions: 46496 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 11 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 46482 Number of HSP's gapped (non-prelim): 14 length of query: 138 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 117 effective length of database: 17,151,101,840 effective search space: 2006678915280 effective search space used: 2006678915280 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)