ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart48a01
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1EXG_ASPOR (Q7Z9L3) Glucan 1,3-beta-glucosidase precursor (EC 3.2... 36 0.070
2EXG_YARLI (Q12725) Glucan 1,3-beta-glucosidase precursor (EC 3.2... 34 0.35
3EXG1_SCHPO (Q9URU6) Glucan 1,3-beta-glucosidase 1 precursor (EC ... 33 0.59
4EXG_BLUGR (Q96V64) Glucan 1,3-beta-glucosidase precursor (EC 3.2... 33 0.77
5EXG_SACBA (Q876J3) Glucan 1,3-beta-glucosidase precursor (EC 3.2... 33 0.77
6EXG2_HANAN (O93983) Glucan 1,3-beta-glucosidase 2 precursor (EC ... 32 1.0
7EXG_DEBOC (Q12700) Glucan 1,3-beta-glucosidase precursor (EC 3.2... 32 1.0
8SPR1_YEAST (P32603) Sporulation-specific glucan 1,3-beta-glucosi... 32 1.3
9EXG_PICAN (Q12626) Glucan 1,3-beta-glucosidase precursor (EC 3.2... 32 1.3
10EXG1_YEAST (P23776) Glucan 1,3-beta-glucosidase I/II precursor (... 32 1.7
11EXG_KLULA (Q12628) Glucan 1,3-beta-glucosidase precursor (EC 3.2... 32 1.7
12SPR1_SACBA (Q876J2) Sporulation-specific glucan 1,3-beta-glucosi... 31 2.2
13RF1_MYCLE (P45833) Peptide chain release factor 1 (RF-1) 31 2.9
14EXG_SACKL (Q875R9) Glucan 1,3-beta-glucosidase precursor (EC 3.2... 30 3.8
15EXG_CANAL (P29717) Glucan 1,3-beta-glucosidase precursor (EC 3.2... 30 3.8
16RF1_MYCTU (P66016) Peptide chain release factor 1 (RF-1) 30 6.5
17RF1_MYCBO (P66017) Peptide chain release factor 1 (RF-1) 30 6.5
18EXG_CANOL (Q8NKF9) Glucan 1,3-beta-glucosidase precursor (EC 3.2... 30 6.5
19VTS1_NEUCR (Q7RZQ3) Protein VTS1 30 6.5
20RS20_AZOSE (Q5P102) 30S ribosomal protein S20 30 6.5
21ZN236_HUMAN (Q9UL36) Zinc finger protein 236 29 8.5
22EXG2_YEAST (P52911) Glucan 1,3-beta-glucosidase 2 precursor (EC ... 29 8.5

>EXG_ASPOR (Q7Z9L3) Glucan 1,3-beta-glucosidase precursor (EC 3.2.1.58)|
           (Exo-1,3-beta-glucanase)
          Length = 405

 Score = 36.2 bits (82), Expect = 0.070
 Identities = 14/18 (77%), Positives = 15/18 (83%)
 Frame = +2

Query: 170 NLGGWLVTEGWILPSLFD 223
           NLGGWLV E WI PS+FD
Sbjct: 35  NLGGWLVLEPWITPSIFD 52



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>EXG_YARLI (Q12725) Glucan 1,3-beta-glucosidase precursor (EC 3.2.1.58)|
           (Exo-1,3-beta-glucanase)
          Length = 421

 Score = 33.9 bits (76), Expect = 0.35
 Identities = 14/24 (58%), Positives = 16/24 (66%)
 Frame = +2

Query: 170 NLGGWLVTEGWILPSLFDGIPNKD 241
           NLGGW V E +I PSLF+   N D
Sbjct: 41  NLGGWFVLEPFITPSLFEAFGNND 64



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>EXG1_SCHPO (Q9URU6) Glucan 1,3-beta-glucosidase 1 precursor (EC 3.2.1.58)|
           (Exo-1,3-beta-glucanase)
          Length = 407

 Score = 33.1 bits (74), Expect = 0.59
 Identities = 12/17 (70%), Positives = 13/17 (76%)
 Frame = +2

Query: 170 NLGGWLVTEGWILPSLF 220
           N+GGWLV E WI P LF
Sbjct: 43  NIGGWLVLENWITPQLF 59



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>EXG_BLUGR (Q96V64) Glucan 1,3-beta-glucosidase precursor (EC 3.2.1.58)|
           (Exo-1,3-beta-glucanase)
          Length = 426

 Score = 32.7 bits (73), Expect = 0.77
 Identities = 15/28 (53%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
 Frame = +2

Query: 170 NLGGWLVTEGWILPSLFDGIPN-KDLLD 250
           NLGGW V E WI PS+F    N  D++D
Sbjct: 41  NLGGWFVLEPWITPSIFQQWANGGDVID 68



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>EXG_SACBA (Q876J3) Glucan 1,3-beta-glucosidase precursor (EC 3.2.1.58)|
           (Exo-1,3-beta-glucanase)
          Length = 448

 Score = 32.7 bits (73), Expect = 0.77
 Identities = 13/24 (54%), Positives = 16/24 (66%)
 Frame = +2

Query: 170 NLGGWLVTEGWILPSLFDGIPNKD 241
           N+GGWLV E +I PSLF+     D
Sbjct: 57  NIGGWLVLEPYITPSLFEAFRTND 80



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>EXG2_HANAN (O93983) Glucan 1,3-beta-glucosidase 2 precursor (EC 3.2.1.58)|
           (Exo-1,3-beta-glucanase 2)
          Length = 427

 Score = 32.3 bits (72), Expect = 1.0
 Identities = 13/23 (56%), Positives = 16/23 (69%)
 Frame = +2

Query: 170 NLGGWLVTEGWILPSLFDGIPNK 238
           NLGGW V E +I PSLF+   N+
Sbjct: 46  NLGGWFVLEPFITPSLFEAFENQ 68



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>EXG_DEBOC (Q12700) Glucan 1,3-beta-glucosidase precursor (EC 3.2.1.58)|
           (Exo-1,3-beta-glucanase)
          Length = 425

 Score = 32.3 bits (72), Expect = 1.0
 Identities = 16/26 (61%), Positives = 17/26 (65%), Gaps = 2/26 (7%)
 Frame = +2

Query: 170 NLGGWLVTEGWILPSLFD--GIPNKD 241
           NLGGW V E +I PSLFD    PN D
Sbjct: 46  NLGGWFVLEPFITPSLFDIYSKPNDD 71



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>SPR1_YEAST (P32603) Sporulation-specific glucan 1,3-beta-glucosidase precursor|
           (EC 3.2.1.58) (Exo-1,3-beta-glucanase)
          Length = 445

 Score = 32.0 bits (71), Expect = 1.3
 Identities = 13/18 (72%), Positives = 15/18 (83%)
 Frame = +2

Query: 170 NLGGWLVTEGWILPSLFD 223
           NLGGWLV E +I PSLF+
Sbjct: 58  NLGGWLVLEPYITPSLFE 75



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>EXG_PICAN (Q12626) Glucan 1,3-beta-glucosidase precursor (EC 3.2.1.58)|
           (Exo-1,3-beta-glucanase)
          Length = 435

 Score = 32.0 bits (71), Expect = 1.3
 Identities = 12/20 (60%), Positives = 16/20 (80%)
 Frame = +2

Query: 170 NLGGWLVTEGWILPSLFDGI 229
           N+GGWLV E +I PSLF+ +
Sbjct: 53  NIGGWLVLEPFITPSLFEAV 72



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>EXG1_YEAST (P23776) Glucan 1,3-beta-glucosidase I/II precursor (EC 3.2.1.58)|
           (Exo-1,3-beta-glucanase I/II) (Soluble cell wall protein
           6)
          Length = 448

 Score = 31.6 bits (70), Expect = 1.7
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = +2

Query: 170 NLGGWLVTEGWILPSLFDGIPNKD 241
           N+GGWL+ E +I PSLF+     D
Sbjct: 57  NIGGWLLLEPYITPSLFEAFRTND 80



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>EXG_KLULA (Q12628) Glucan 1,3-beta-glucosidase precursor (EC 3.2.1.58)|
           (Exo-1,3-beta-glucanase)
          Length = 429

 Score = 31.6 bits (70), Expect = 1.7
 Identities = 13/18 (72%), Positives = 15/18 (83%)
 Frame = +2

Query: 170 NLGGWLVTEGWILPSLFD 223
           NLGGWLV E +I PSLF+
Sbjct: 40  NLGGWLVLEPFITPSLFE 57



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>SPR1_SACBA (Q876J2) Sporulation-specific glucan 1,3-beta-glucosidase precursor|
           (EC 3.2.1.58) (Exo-1,3-beta-glucanase)
          Length = 445

 Score = 31.2 bits (69), Expect = 2.2
 Identities = 12/18 (66%), Positives = 15/18 (83%)
 Frame = +2

Query: 170 NLGGWLVTEGWILPSLFD 223
           NLGGWLV E +I PS+F+
Sbjct: 58  NLGGWLVLEPYITPSIFE 75



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>RF1_MYCLE (P45833) Peptide chain release factor 1 (RF-1)|
          Length = 361

 Score = 30.8 bits (68), Expect = 2.9
 Identities = 21/66 (31%), Positives = 33/66 (50%)
 Frame = -1

Query: 424 DELVAEHLQIEGRLVDPP*LEGLPARRLRPVRHQPRAAALLRGHKAVLRHRLELQLRAVQ 245
           D L+ EH ++E  L DP  L   PA   +  R   R A ++  H+ ++  R +LQ    +
Sbjct: 9   DVLLIEHAELELALADPE-LHSNPAEARKAGRRFARLAPIVATHRKLISARDDLQ--TAR 65

Query: 244 EVFVGD 227
           E+  GD
Sbjct: 66  ELAAGD 71



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>EXG_SACKL (Q875R9) Glucan 1,3-beta-glucosidase precursor (EC 3.2.1.58)|
           (Exo-1,3-beta-glucanase)
          Length = 439

 Score = 30.4 bits (67), Expect = 3.8
 Identities = 20/65 (30%), Positives = 28/65 (43%)
 Frame = +2

Query: 170 NLGGWLVTEGWILPSLFDGIPNKDLLDGTQLQFKSVTQDGFVAAEKGGGAGLVANRSQAS 349
           N+GGWL+ E +I PSLF+     +  D        +  D +   E  G    VA     +
Sbjct: 52  NIGGWLLLEPYITPSLFEAFRTDENSDA------GIPVDEYHYCEALGSE--VAESRLEA 103

Query: 350 GWETF 364
            W TF
Sbjct: 104 HWSTF 108



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>EXG_CANAL (P29717) Glucan 1,3-beta-glucosidase precursor (EC 3.2.1.58)|
           (Exo-1,3-beta-glucanase)
          Length = 438

 Score = 30.4 bits (67), Expect = 3.8
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = +2

Query: 170 NLGGWLVTEGWILPSLFDGIPN 235
           NLGGW V E ++ PSLF+   N
Sbjct: 57  NLGGWFVLEPYMTPSLFEPFQN 78



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>RF1_MYCTU (P66016) Peptide chain release factor 1 (RF-1)|
          Length = 357

 Score = 29.6 bits (65), Expect = 6.5
 Identities = 19/55 (34%), Positives = 28/55 (50%)
 Frame = -1

Query: 424 DELVAEHLQIEGRLVDPP*LEGLPARRLRPVRHQPRAAALLRGHKAVLRHRLELQ 260
           D L+AEH ++E  L DP  L   PA   R  R   R A ++  H+ +   R +L+
Sbjct: 9   DVLLAEHAELELALADPA-LHSNPAEARRVGRRFARLAPIVATHRKLTSARDDLE 62



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>RF1_MYCBO (P66017) Peptide chain release factor 1 (RF-1)|
          Length = 357

 Score = 29.6 bits (65), Expect = 6.5
 Identities = 19/55 (34%), Positives = 28/55 (50%)
 Frame = -1

Query: 424 DELVAEHLQIEGRLVDPP*LEGLPARRLRPVRHQPRAAALLRGHKAVLRHRLELQ 260
           D L+AEH ++E  L DP  L   PA   R  R   R A ++  H+ +   R +L+
Sbjct: 9   DVLLAEHAELELALADPA-LHSNPAEARRVGRRFARLAPIVATHRKLTSARDDLE 62



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>EXG_CANOL (Q8NKF9) Glucan 1,3-beta-glucosidase precursor (EC 3.2.1.58)|
           (Exo-1,3-beta-glucanase)
          Length = 425

 Score = 29.6 bits (65), Expect = 6.5
 Identities = 12/17 (70%), Positives = 13/17 (76%)
 Frame = +2

Query: 170 NLGGWLVTEGWILPSLF 220
           NLGGW V E +I PSLF
Sbjct: 41  NLGGWFVLEPYITPSLF 57



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>VTS1_NEUCR (Q7RZQ3) Protein VTS1|
          Length = 610

 Score = 29.6 bits (65), Expect = 6.5
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = +2

Query: 251 GTQLQFKSVTQDGFVAAEKGGGAGLVAN 334
           G+ LQF S   +GF++A  GG  GL+ N
Sbjct: 474 GSALQFTSPQNNGFLSAYDGGAPGLINN 501



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>RS20_AZOSE (Q5P102) 30S ribosomal protein S20|
          Length = 88

 Score = 29.6 bits (65), Expect = 6.5
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = -1

Query: 331 RHQPRAAALLRGHKAVLRHRLELQLRAVQEVFVG 230
           R + R A + R H   LR RL   ++AVQ+  VG
Sbjct: 8   RKRARQAVVARAHNGSLRSRLRTAIKAVQKAVVG 41



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>ZN236_HUMAN (Q9UL36) Zinc finger protein 236|
          Length = 1845

 Score = 29.3 bits (64), Expect = 8.5
 Identities = 13/43 (30%), Positives = 24/43 (55%)
 Frame = +2

Query: 443  SVVATATSPGKSETFRLVRNAGQNRMRIMAANGLFLQANKDSS 571
            S++   +S G + T RL++ + Q  + + A    FL+ N+D S
Sbjct: 921  SLLQAPSSDGMNVTTRLIQESSQEELDLQAQGSQFLEDNEDQS 963



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>EXG2_YEAST (P52911) Glucan 1,3-beta-glucosidase 2 precursor (EC 3.2.1.58)|
           (Exo-1,3-beta-glucanase 2)
          Length = 562

 Score = 29.3 bits (64), Expect = 8.5
 Identities = 11/16 (68%), Positives = 14/16 (87%)
 Frame = +2

Query: 173 LGGWLVTEGWILPSLF 220
           +GGWLVTE +I PSL+
Sbjct: 60  IGGWLVTEPYITPSLY 75


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 59,636,696
Number of Sequences: 219361
Number of extensions: 944205
Number of successful extensions: 3329
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 3264
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3328
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4929664480
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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