Clone Name | bart46h11 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | CO410_WHEAT (P46524) Dehydrin COR410 (Cold-induced COR410 protein) | 50 | 1e-06 |
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>CO410_WHEAT (P46524) Dehydrin COR410 (Cold-induced COR410 protein)| Length = 262 Score = 50.4 bits (119), Expect = 1e-06 Identities = 32/85 (37%), Positives = 35/85 (41%), Gaps = 4/85 (4%) Frame = +3 Query: 6 GAEADQVEVTDRXXXXXXXXXXXXXXXXXXXXXXVTGMXXXXXXX----XXXXXDGEKKE 173 G A+QVEVTDR VTGM DGEKKE Sbjct: 13 GEAAEQVEVTDRGLLGNLLGKKKAEEDKEKEEELVTGMEKVSVEEPEVKKEEHEDGEKKE 72 Query: 174 TLFSKLHRXXXXXXXXXDQEEEEEV 248 TLFSKLHR D+EEEE + Sbjct: 73 TLFSKLHRSSSSSSSSSDEEEEEVI 97 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 14,956,398 Number of Sequences: 219361 Number of extensions: 143819 Number of successful extensions: 1163 Number of sequences better than 10.0: 1 Number of HSP's better than 10.0 without gapping: 891 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1148 length of database: 80,573,946 effective HSP length: 59 effective length of database: 67,631,647 effective search space used: 1623159528 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)