ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart46h11
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1CO410_WHEAT (P46524) Dehydrin COR410 (Cold-induced COR410 protein) 50 1e-06

>CO410_WHEAT (P46524) Dehydrin COR410 (Cold-induced COR410 protein)|
          Length = 262

 Score = 50.4 bits (119), Expect = 1e-06
 Identities = 32/85 (37%), Positives = 35/85 (41%), Gaps = 4/85 (4%)
 Frame = +3

Query: 6   GAEADQVEVTDRXXXXXXXXXXXXXXXXXXXXXXVTGMXXXXXXX----XXXXXDGEKKE 173
           G  A+QVEVTDR                      VTGM                DGEKKE
Sbjct: 13  GEAAEQVEVTDRGLLGNLLGKKKAEEDKEKEEELVTGMEKVSVEEPEVKKEEHEDGEKKE 72

Query: 174 TLFSKLHRXXXXXXXXXDQEEEEEV 248
           TLFSKLHR         D+EEEE +
Sbjct: 73  TLFSKLHRSSSSSSSSSDEEEEEVI 97


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,956,398
Number of Sequences: 219361
Number of extensions: 143819
Number of successful extensions: 1163
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 891
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1148
length of database: 80,573,946
effective HSP length: 59
effective length of database: 67,631,647
effective search space used: 1623159528
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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