>PAP2_ORYSA (Q6K439) Probable plastid-lipid-associated protein 2, chloroplast|
           precursor (Fibrillin-like protein 2)
          Length = 319

 Score =  136 bits (342), Expect = 4e-32
 Identities = 88/164 (53%), Positives = 96/164 (58%), Gaps = 10/164 (6%)
 Frame = +2

Query: 83  MAGVASLNAXXXXXXXXXXXXGASSARGRLLSPA------ARRFPSLXXXXXXXXXXXXX 244
           MAG +SL+              AS+   RL++PA      A RFP+L             
Sbjct: 1   MAGSSSLSTLSLCTQSPSPSPVASA---RLVAPAVLGFAGAPRFPTLRAAPRRLTARAVA 57

Query: 245 XXXXXEWGKEPA--EGGTA--VAEAPSXXXXXXXXXXXXXXXXXXXXYGTERGLRASSET 412
                EWGKEPA  +GG A  VAEAP+                    YGTERGLRASSET
Sbjct: 58  GDAEDEWGKEPAADQGGAAAAVAEAPADVPVTSEVAELKAKLKEAL-YGTERGLRASSET 116

Query: 413 RAEVVELITQLEARNPTPAPTEALTLLNGKWILAYTSFSQLFPL 544
           RAEVVELITQLEARNPTPAPTEALTLLNGKWILAYTSFSQLFPL
Sbjct: 117 RAEVVELITQLEARNPTPAPTEALTLLNGKWILAYTSFSQLFPL 160

>PAP_CITUN (Q9ZWQ8) Plastid-lipid associated protein, chloroplast precursor|
           (CitPAP)
          Length = 323

 Score =  110 bits (275), Expect = 3e-24
 Identities = 59/96 (61%), Positives = 64/96 (66%), Gaps = 1/96 (1%)
 Frame = +2

Query: 260 EWGKEPA-EGGTAVAEAPSXXXXXXXXXXXXXXXXXXXXYGTERGLRASSETRAEVVELI 436
           EWG E   EGG A+A A                      YGT+RGL A+SETRAE+VELI
Sbjct: 69  EWGPEKEKEGGGALAVAEEESPKEVTEIDNLKKALVDSFYGTDRGLNATSETRAEIVELI 128

Query: 437 TQLEARNPTPAPTEALTLLNGKWILAYTSFSQLFPL 544
           TQLEA+NPTPAPTEALTLLN KWIL YTSFS LFPL
Sbjct: 129 TQLEAKNPTPAPTEALTLLNAKWILVYTSFSGLFPL 164

>LIPC_SOLTU (P80471) Light-induced protein, chloroplast precursor|
           (Chloroplastic drought-induced stress protein CDSP-34)
          Length = 326

 Score =  104 bits (260), Expect = 1e-22
 Identities = 59/98 (60%), Positives = 63/98 (64%), Gaps = 3/98 (3%)
 Frame = +2

Query: 260 EWGKEPAE---GGTAVAEAPSXXXXXXXXXXXXXXXXXXXXYGTERGLRASSETRAEVVE 430
           EWG E  +   GG AV E                       YGT RGL ASSETRAE+VE
Sbjct: 72  EWGPEVEQIRPGGVAVVEEEPPKEPSEIELLKKQLADSL--YGTNRGLSASSETRAEIVE 129

Query: 431 LITQLEARNPTPAPTEALTLLNGKWILAYTSFSQLFPL 544
           LITQLE++NP PAPTEALTLLNGKWILAYTSFS LFPL
Sbjct: 130 LITQLESKNPNPAPTEALTLLNGKWILAYTSFSGLFPL 167

>LIPC_SOLDE (O99019) Light-induced protein, chloroplast precursor (C40.4)|
          Length = 326

 Score =  104 bits (260), Expect = 1e-22
 Identities = 59/98 (60%), Positives = 63/98 (64%), Gaps = 3/98 (3%)
 Frame = +2

Query: 260 EWGKEPAE---GGTAVAEAPSXXXXXXXXXXXXXXXXXXXXYGTERGLRASSETRAEVVE 430
           EWG E  +   GG AV E                       YGT RGL ASSETRAE+VE
Sbjct: 72  EWGPEVEQIRPGGVAVVEEEPPKEPSEIELLKKQLADSL--YGTNRGLSASSETRAEIVE 129

Query: 431 LITQLEARNPTPAPTEALTLLNGKWILAYTSFSQLFPL 544
           LITQLE++NP PAPTEALTLLNGKWILAYTSFS LFPL
Sbjct: 130 LITQLESKNPNPAPTEALTLLNGKWILAYTSFSGLFPL 167

>CHRC_CUCSA (Q96398) Chromoplast-specific carotenoid-associated protein,|
           chloroplast precursor
          Length = 322

 Score =  104 bits (259), Expect = 2e-22
 Identities = 55/100 (55%), Positives = 64/100 (64%), Gaps = 5/100 (5%)
 Frame = +2

Query: 260 EWGKEPAE-----GGTAVAEAPSXXXXXXXXXXXXXXXXXXXXYGTERGLRASSETRAEV 424
           EWG++  E        AVAE                       YGT+RGLR S +TRAE+
Sbjct: 65  EWGEDKDEKYGDDSSVAVAEKEEEKPLEPSEIYKLKKALVDSFYGTDRGLRVSRDTRAEI 124

Query: 425 VELITQLEARNPTPAPTEALTLLNGKWILAYTSFSQLFPL 544
           VELITQLE++NPTPAPTEALTLLNGKWILAYT+F+ LFPL
Sbjct: 125 VELITQLESKNPTPAPTEALTLLNGKWILAYTTFAGLFPL 164

>PAP2_ARATH (O49629) Probable plastid-lipid associated protein 2, chloroplast|
           precursor (AtPap2) (Fibrillin 2)
          Length = 310

 Score = 98.2 bits (243), Expect = 1e-20
 Identities = 47/57 (82%), Positives = 52/57 (91%)
 Frame = +2

Query: 374 YGTERGLRASSETRAEVVELITQLEARNPTPAPTEALTLLNGKWILAYTSFSQLFPL 544
           YGT+RGL ASSETRAE+ +LITQLE++NPTPAPTEAL LLNGKWILAYTSF  LFPL
Sbjct: 95  YGTDRGLSASSETRAEIGDLITQLESKNPTPAPTEALFLLNGKWILAYTSFVNLFPL 151

>PAP2_BRACM (Q94KU6) Plastid lipid-associated protein 2, chloroplast precursor|
          Length = 319

 Score = 96.7 bits (239), Expect = 4e-20
 Identities = 51/95 (53%), Positives = 59/95 (62%)
 Frame = +2

Query: 260 EWGKEPAEGGTAVAEAPSXXXXXXXXXXXXXXXXXXXXYGTERGLRASSETRAEVVELIT 439
           E   E +EGG +                          YGT+RGL ASSETRAE+ +LIT
Sbjct: 66  ELDPETSEGGGSALLMAEEAIESVEETEVLKRSLVDSLYGTDRGLSASSETRAEIGDLIT 125

Query: 440 QLEARNPTPAPTEALTLLNGKWILAYTSFSQLFPL 544
           QLE++NPTPAPT+AL LLNGKWILAYTSF  LFPL
Sbjct: 126 QLESKNPTPAPTDALFLLNGKWILAYTSFVGLFPL 160

>PAP1_BRACM (Q94FZ9) Plastid lipid-associated protein 1, chloroplast precursor|
          Length = 327

 Score = 95.9 bits (237), Expect = 6e-20
 Identities = 49/95 (51%), Positives = 55/95 (57%)
 Frame = +2

Query: 260 EWGKEPAEGGTAVAEAPSXXXXXXXXXXXXXXXXXXXXYGTERGLRASSETRAEVVELIT 439
           EWG E     +   +                       YGT+RGL ASSETRAE+ ELIT
Sbjct: 74  EWGPEIGLNSSVAEKVAEEAIESAEETERLKRVLAGSLYGTDRGLSASSETRAEISELIT 133

Query: 440 QLEARNPTPAPTEALTLLNGKWILAYTSFSQLFPL 544
           QLE++NP PAP EAL LLNGKWIL YTSF  LFPL
Sbjct: 134 QLESKNPNPAPNEALFLLNGKWILVYTSFVGLFPL 168

>PAP1_ARATH (O81439) Probable plastid-lipid associated protein 1, chloroplast|
           precursor (AtPap1) (Fibrillin 1)
          Length = 318

 Score = 94.7 bits (234), Expect = 1e-19
 Identities = 49/98 (50%), Positives = 58/98 (59%), Gaps = 3/98 (3%)
 Frame = +2

Query: 260 EWGKEPAE---GGTAVAEAPSXXXXXXXXXXXXXXXXXXXXYGTERGLRASSETRAEVVE 430
           EWG++  E     ++                          YGT+RGL  SS+TRAE+ E
Sbjct: 62  EWGQDGVERVFASSSTVSVADKAIESVEETERLKRSLADSLYGTDRGLSVSSDTRAEISE 121

Query: 431 LITQLEARNPTPAPTEALTLLNGKWILAYTSFSQLFPL 544
           LITQLE++NPTPAP EAL LLNGKWILAYTSF  LFPL
Sbjct: 122 LITQLESKNPTPAPNEALFLLNGKWILAYTSFVGLFPL 159

>PAP3_ARATH (O82291) Probable plastid-lipid associated protein 3, chloroplast|
           precursor (AtPap3) (Fibrillin 3)
          Length = 376

 Score = 79.7 bits (195), Expect = 5e-15
 Identities = 37/57 (64%), Positives = 44/57 (77%)
 Frame = +2

Query: 374 YGTERGLRASSETRAEVVELITQLEARNPTPAPTEALTLLNGKWILAYTSFSQLFPL 544
           YGTE G +A SE RAEV+EL+ QLEA NPTPAP E   LL+G W+L YT+FS+L PL
Sbjct: 162 YGTELGFKAGSEVRAEVLELVNQLEALNPTPAPLENPELLDGNWVLLYTAFSELIPL 218

>PAP3_ORYSA (Q7XBW5) Probable plastid-lipid associated protein 3, chloroplast|
           precursor
          Length = 374

 Score = 77.8 bits (190), Expect = 2e-14
 Identities = 35/57 (61%), Positives = 44/57 (77%)
 Frame = +2

Query: 374 YGTERGLRASSETRAEVVELITQLEARNPTPAPTEALTLLNGKWILAYTSFSQLFPL 544
           YG++ G RASSE R EV+EL+TQLEA NPTP P +A  LL G WIL YT++S+L P+
Sbjct: 158 YGSDLGFRASSEVRGEVLELVTQLEATNPTPEPVQATHLLAGNWILIYTAYSELLPI 214

>PG1_PEA (Q9ZP40) Plastoglobulin 1, chloroplast precursor|
          Length = 358

 Score = 77.8 bits (190), Expect = 2e-14
 Identities = 37/57 (64%), Positives = 41/57 (71%)
 Frame = +2

Query: 374 YGTERGLRASSETRAEVVELITQLEARNPTPAPTEALTLLNGKWILAYTSFSQLFPL 544
           YGTE G RA SE RAEV E + QLEA NPTPAP E   LLNG W+L YT+ S+L PL
Sbjct: 144 YGTELGFRARSEVRAEVSEFVAQLEAANPTPAPVEEPDLLNGNWVLLYTASSELLPL 200

>PAP3_BRACM (Q94KU5) Plastid lipid-associated protein 3, chloroplast precursor|
          Length = 360

 Score = 77.4 bits (189), Expect = 2e-14
 Identities = 36/57 (63%), Positives = 43/57 (75%)
 Frame = +2

Query: 374 YGTERGLRASSETRAEVVELITQLEARNPTPAPTEALTLLNGKWILAYTSFSQLFPL 544
           YGTE G RA SE RAEV+E++ QLEA NPT AP E   LL+G W+L YT+FS+L PL
Sbjct: 146 YGTELGFRAGSEVRAEVLEIVNQLEALNPTQAPVENPELLDGNWVLLYTAFSELLPL 202


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,379,690
Number of Sequences: 219361
Number of extensions: 442808
Number of successful extensions: 1953
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1774
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1952
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4315578075
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)