ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart46h08 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_450158.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1243 Score = 270 bits (136), Expect = 4e-69 Identities = 175/188 (93%) Strand = Plus / Plus Query: 341 gcggcgctcaagcagaagctcaaggcggcgctgtacgggacggagcgcggcctgcgcgct 400 |||| ||||||| |||||| |||| |||||||||||| |||||||||||||||||||| Sbjct: 338 gcggagctcaaggcgaagctgaaggaggcgctgtacggtacggagcgcggcctgcgcgcg 397 Query: 401 tccagcgagacgcgcgcggaggtcgtcgagctcatcacgcagctcgaggcgcgcaacccc 460 ||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||| Sbjct: 398 tccagcgagacgcgcgcggaggtggtcgagctcatcacgcagctcgaggcccgcaacccc 457 Query: 461 acgccggcccccaccgaggctctcacccttctcaacggcaagtggatcctcgcgtacaca 520 |||||||| ||||||||||| |||||||| ||||||||||||||||||||||||||||| Sbjct: 458 acgccggcgcccaccgaggcgctcaccctcctcaacggcaagtggatcctcgcgtacacc 517 Query: 521 tcattttc 528 |||||||| Sbjct: 518 tcattttc 525 Score = 77.8 bits (39), Expect = 3e-11 Identities = 86/99 (86%), Gaps = 2/99 (2%) Strand = Plus / Plus Query: 184 ggcccggcgcttcccgtcgctgcgggccgcgcggc-gcgtcgtcacggcgcgggcggttc 242 ||||| ||| |||||| ||||||||||||||| | ||| | | |||||||||||||| Sbjct: 172 ggccccgcggttcccgacgctgcgggccgcgccacggcggc-tgacggcgcgggcggtgg 230 Query: 243 ccgtggacgccgacgacgagtgggggaaggagccggcgg 281 ||| ||||||||| ||||||||||||||||||||||||| Sbjct: 231 ccggggacgccgaggacgagtgggggaaggagccggcgg 269
>gb|AY224474.1| Oryza sativa (japonica cultivar-group) isolate 29042 fibrillin-like protein mRNA, complete cds Length = 960 Score = 270 bits (136), Expect = 4e-69 Identities = 175/188 (93%) Strand = Plus / Plus Query: 341 gcggcgctcaagcagaagctcaaggcggcgctgtacgggacggagcgcggcctgcgcgct 400 |||| ||||||| |||||| |||| |||||||||||| |||||||||||||||||||| Sbjct: 277 gcggagctcaaggcgaagctgaaggaggcgctgtacggtacggagcgcggcctgcgcgcg 336 Query: 401 tccagcgagacgcgcgcggaggtcgtcgagctcatcacgcagctcgaggcgcgcaacccc 460 ||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||| Sbjct: 337 tccagcgagacgcgcgcggaggtggtcgagctcatcacgcagctcgaggcccgcaacccc 396 Query: 461 acgccggcccccaccgaggctctcacccttctcaacggcaagtggatcctcgcgtacaca 520 |||||||| ||||||||||| |||||||| ||||||||||||||||||||||||||||| Sbjct: 397 acgccggcgcccaccgaggcgctcaccctcctcaacggcaagtggatcctcgcgtacacc 456 Query: 521 tcattttc 528 |||||||| Sbjct: 457 tcattttc 464 Score = 73.8 bits (37), Expect = 5e-10 Identities = 85/99 (85%), Gaps = 2/99 (2%) Strand = Plus / Plus Query: 184 ggcccggcgcttcccgtcgctgcgggccgcgcggc-gcgtcgtcacggcgcgggcggttc 242 ||||| ||| |||||| ||||||||||||||| | ||| | | |||||||||||||| Sbjct: 111 ggccccgcggttcccgacgctgcgggccgcgccacggcggc-tgacggcgcgggcggtgg 169 Query: 243 ccgtggacgccgacgacgagtgggggaaggagccggcgg 281 ||| ||||||||| ||||||| ||||||||||||||||| Sbjct: 170 ccggggacgccgaggacgagtkggggaaggagccggcgg 208
>dbj|AK099394.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000I12, full insert sequence Length = 1243 Score = 270 bits (136), Expect = 4e-69 Identities = 175/188 (93%) Strand = Plus / Plus Query: 341 gcggcgctcaagcagaagctcaaggcggcgctgtacgggacggagcgcggcctgcgcgct 400 |||| ||||||| |||||| |||| |||||||||||| |||||||||||||||||||| Sbjct: 338 gcggagctcaaggcgaagctgaaggaggcgctgtacggtacggagcgcggcctgcgcgcg 397 Query: 401 tccagcgagacgcgcgcggaggtcgtcgagctcatcacgcagctcgaggcgcgcaacccc 460 ||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||| Sbjct: 398 tccagcgagacgcgcgcggaggtggtcgagctcatcacgcagctcgaggcccgcaacccc 457 Query: 461 acgccggcccccaccgaggctctcacccttctcaacggcaagtggatcctcgcgtacaca 520 |||||||| ||||||||||| |||||||| ||||||||||||||||||||||||||||| Sbjct: 458 acgccggcgcccaccgaggcgctcaccctcctcaacggcaagtggatcctcgcgtacacc 517 Query: 521 tcattttc 528 |||||||| Sbjct: 518 tcattttc 525 Score = 77.8 bits (39), Expect = 3e-11 Identities = 86/99 (86%), Gaps = 2/99 (2%) Strand = Plus / Plus Query: 184 ggcccggcgcttcccgtcgctgcgggccgcgcggc-gcgtcgtcacggcgcgggcggttc 242 ||||| ||| |||||| ||||||||||||||| | ||| | | |||||||||||||| Sbjct: 172 ggccccgcggttcccgacgctgcgggccgcgccacggcggc-tgacggcgcgggcggtgg 230 Query: 243 ccgtggacgccgacgacgagtgggggaaggagccggcgg 281 ||| ||||||||| ||||||||||||||||||||||||| Sbjct: 231 ccggggacgccgaggacgagtgggggaaggagccggcgg 269
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 254 bits (128), Expect = 3e-64 Identities = 164/176 (93%) Strand = Plus / Plus Query: 341 gcggcgctcaagcagaagctcaaggcggcgctgtacgggacggagcgcggcctgcgcgct 400 |||| ||||||| |||||| |||| |||||||||||| |||||||||||||||||||| Sbjct: 2496140 gcggagctcaaggcgaagctgaaggaggcgctgtacggtacggagcgcggcctgcgcgcg 2496199 Query: 401 tccagcgagacgcgcgcggaggtcgtcgagctcatcacgcagctcgaggcgcgcaacccc 460 ||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||| Sbjct: 2496200 tccagcgagacgcgcgcggaggtggtcgagctcatcacgcagctcgaggcccgcaacccc 2496259 Query: 461 acgccggcccccaccgaggctctcacccttctcaacggcaagtggatcctcgcgta 516 |||||||| ||||||||||| |||||||| |||||||||||||||||||||||||| Sbjct: 2496260 acgccggcgcccaccgaggcgctcaccctcctcaacggcaagtggatcctcgcgta 2496315 Score = 77.8 bits (39), Expect = 3e-11 Identities = 86/99 (86%), Gaps = 2/99 (2%) Strand = Plus / Plus Query: 184 ggcccggcgcttcccgtcgctgcgggccgcgcggc-gcgtcgtcacggcgcgggcggttc 242 ||||| ||| |||||| ||||||||||||||| | ||| | | |||||||||||||| Sbjct: 2495974 ggccccgcggttcccgacgctgcgggccgcgccacggcggc-tgacggcgcgggcggtgg 2496032 Query: 243 ccgtggacgccgacgacgagtgggggaaggagccggcgg 281 ||| ||||||||| ||||||||||||||||||||||||| Sbjct: 2496033 ccggggacgccgaggacgagtgggggaaggagccggcgg 2496071
>dbj|AP005583.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0406E03 Length = 201069 Score = 254 bits (128), Expect = 3e-64 Identities = 164/176 (93%) Strand = Plus / Plus Query: 341 gcggcgctcaagcagaagctcaaggcggcgctgtacgggacggagcgcggcctgcgcgct 400 |||| ||||||| |||||| |||| |||||||||||| |||||||||||||||||||| Sbjct: 82730 gcggagctcaaggcgaagctgaaggaggcgctgtacggtacggagcgcggcctgcgcgcg 82789 Query: 401 tccagcgagacgcgcgcggaggtcgtcgagctcatcacgcagctcgaggcgcgcaacccc 460 ||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||| Sbjct: 82790 tccagcgagacgcgcgcggaggtggtcgagctcatcacgcagctcgaggcccgcaacccc 82849 Query: 461 acgccggcccccaccgaggctctcacccttctcaacggcaagtggatcctcgcgta 516 |||||||| ||||||||||| |||||||| |||||||||||||||||||||||||| Sbjct: 82850 acgccggcgcccaccgaggcgctcaccctcctcaacggcaagtggatcctcgcgta 82905 Score = 77.8 bits (39), Expect = 3e-11 Identities = 86/99 (86%), Gaps = 2/99 (2%) Strand = Plus / Plus Query: 184 ggcccggcgcttcccgtcgctgcgggccgcgcggc-gcgtcgtcacggcgcgggcggttc 242 ||||| ||| |||||| ||||||||||||||| | ||| | | |||||||||||||| Sbjct: 82564 ggccccgcggttcccgacgctgcgggccgcgccacggcggc-tgacggcgcgggcggtgg 82622 Query: 243 ccgtggacgccgacgacgagtgggggaaggagccggcgg 281 ||| ||||||||| ||||||||||||||||||||||||| Sbjct: 82623 ccggggacgccgaggacgagtgggggaaggagccggcgg 82661
>ref|XM_506635.1| PREDICTED Oryza sativa (japonica cultivar-group), P0406E03.32-1 patrial mRNA Length = 954 Score = 216 bits (109), Expect = 6e-53 Identities = 130/137 (94%) Strand = Plus / Plus Query: 392 ctgcgcgcttccagcgagacgcgcgcggaggtcgtcgagctcatcacgcagctcgaggcg 451 |||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 94 ctgcgcgcgtccagcgagacgcgcgcggaggtggtcgagctcatcacgcagctcgaggcc 153 Query: 452 cgcaaccccacgccggcccccaccgaggctctcacccttctcaacggcaagtggatcctc 511 ||||||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 154 cgcaaccccacgccggcgcccaccgaggcgctcaccctcctcaacggcaagtggatcctc 213 Query: 512 gcgtacacatcattttc 528 |||||||| |||||||| Sbjct: 214 gcgtacacctcattttc 230
>dbj|AK104742.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-E02, full insert sequence Length = 954 Score = 216 bits (109), Expect = 6e-53 Identities = 130/137 (94%) Strand = Plus / Plus Query: 392 ctgcgcgcttccagcgagacgcgcgcggaggtcgtcgagctcatcacgcagctcgaggcg 451 |||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 94 ctgcgcgcgtccagcgagacgcgcgcggaggtggtcgagctcatcacgcagctcgaggcc 153 Query: 452 cgcaaccccacgccggcccccaccgaggctctcacccttctcaacggcaagtggatcctc 511 ||||||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 154 cgcaaccccacgccggcgcccaccgaggcgctcaccctcctcaacggcaagtggatcctc 213 Query: 512 gcgtacacatcattttc 528 |||||||| |||||||| Sbjct: 214 gcgtacacctcattttc 230
>dbj|AK061477.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-F11, full insert sequence Length = 954 Score = 216 bits (109), Expect = 6e-53 Identities = 130/137 (94%) Strand = Plus / Plus Query: 392 ctgcgcgcttccagcgagacgcgcgcggaggtcgtcgagctcatcacgcagctcgaggcg 451 |||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 94 ctgcgcgcgtccagcgagacgcgcgcggaggtggtcgagctcatcacgcagctcgaggcc 153 Query: 452 cgcaaccccacgccggcccccaccgaggctctcacccttctcaacggcaagtggatcctc 511 ||||||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 154 cgcaaccccacgccggcgcccaccgaggcgctcaccctcctcaacggcaagtggatcctc 213 Query: 512 gcgtacacatcattttc 528 |||||||| |||||||| Sbjct: 214 gcgtacacctcattttc 230
>gb|AY105489.1| Zea mays PCO103470 mRNA sequence Length = 1278 Score = 176 bits (89), Expect = 5e-41 Identities = 155/177 (87%) Strand = Plus / Plus Query: 368 gcgctgtacgggacggagcgcggcctgcgcgcttccagcgagacgcgcgcggaggtcgtc 427 ||||||||||| || ||||| |||||||| || ||||||||| |||| || |||| | Sbjct: 409 gcgctgtacggcacagagcggggcctgcgggcgtccagcgagtcgcgggccaaggtgttg 468 Query: 428 gagctcatcacgcagctcgaggcgcgcaaccccacgccggcccccaccgaggctctcacc 487 ||||||||||||||||||||| ||||||||||||||||||| || ||||| || || || Sbjct: 469 gagctcatcacgcagctcgagacgcgcaaccccacgccggcgcctaccgaagcgctgacg 528 Query: 488 cttctcaacggcaagtggatcctcgcgtacacatcattttcgcaattgttcccactg 544 || |||||||||||||||||||||||||||||||||||||| ||| ||||||||||| Sbjct: 529 ctcctcaacggcaagtggatcctcgcgtacacatcattttcccaactgttcccactg 585
>gb|AF290564.1|AF290564 Brassica rapa plastid-lipid associated protein PAP2 mRNA, complete cds; nuclear gene for plastid product Length = 1151 Score = 73.8 bits (37), Expect = 5e-10 Identities = 49/53 (92%) Strand = Plus / Plus Query: 470 cccaccgaggctctcacccttctcaacggcaagtggatcctcgcgtacacatc 522 |||||||| |||||| ||||||||||||||| |||||||||||||||||||| Sbjct: 428 cccaccgatgctctcttccttctcaacggcaaatggatcctcgcgtacacatc 480
>gb|AF290567.1|AF290567 Brassica rapa plastid-lipid associated protein PAP2 gene, complete cds; nuclear gene for plastid product Length = 1057 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 470 cccaccgaggctctcacccttctcaacggcaagtggatcctcgcgta 516 |||||||| |||||| ||||||||||||||| |||||||||||||| Sbjct: 422 cccaccgatgctctcttccttctcaacggcaaatggatcctcgcgta 468
>gb|BT020480.1| Arabidopsis thaliana At4g22240 gene, complete cds Length = 946 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 487 ccttctcaacggcaagtggatcctcgcgtacacatc 522 ||||||||||||||| ||||||||||| |||||||| Sbjct: 399 ccttctcaacggcaaatggatcctcgcctacacatc 434
>gb|BT020429.1| Arabidopsis thaliana At4g22240 mRNA, complete cds Length = 933 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 487 ccttctcaacggcaagtggatcctcgcgtacacatc 522 ||||||||||||||| ||||||||||| |||||||| Sbjct: 396 ccttctcaacggcaaatggatcctcgcctacacatc 431
>ref|NM_118350.2| Arabidopsis thaliana structural molecule AT4G22240 mRNA, complete cds Length = 1297 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 487 ccttctcaacggcaagtggatcctcgcgtacacatc 522 ||||||||||||||| ||||||||||| |||||||| Sbjct: 473 ccttctcaacggcaaatggatcctcgcctacacatc 508
>gb|AY074581.1| Arabidopsis thaliana AT4g22240/T10I14_70 mRNA, complete cds Length = 1096 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 487 ccttctcaacggcaagtggatcctcgcgtacacatc 522 ||||||||||||||| ||||||||||| |||||||| Sbjct: 433 ccttctcaacggcaaatggatcctcgcctacacatc 468
>emb|AL161557.2|ATCHRIV57 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 57 Length = 199577 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 487 ccttctcaacggcaagtggatcctcgcgta 516 ||||||||||||||| |||||||||||||| Sbjct: 3539 ccttctcaacggcaaatggatcctcgcgta 3510
>emb|AL161556.2|ATCHRIV56 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 56 Length = 196247 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 487 ccttctcaacggcaagtggatcctcgcgta 516 ||||||||||||||| |||||||||||||| Sbjct: 194786 ccttctcaacggcaaatggatcctcgcgta 194757
>emb|AL021712.2|ATT10I14 Arabidopsis thaliana DNA chromosome 4, BAC clone T10I14 (ESSA project) Length = 82891 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 487 ccttctcaacggcaagtggatcctcgcgta 516 ||||||||||||||| |||||||||||||| Sbjct: 37444 ccttctcaacggcaaatggatcctcgcgta 37415
>emb|BX828186.1|CNS0A3YI Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH61ZC09 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1313 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 487 ccttctcaacggcaagtggatcctcgcgta 516 ||||||||||||||| |||||||||||||| Sbjct: 408 ccttctcaacggcaaatggatcctcgcgta 437
>gb|AY084549.1| Arabidopsis thaliana clone 111376 mRNA, complete sequence Length = 1143 Score = 48.1 bits (24), Expect = 0.030 Identities = 33/36 (91%) Strand = Plus / Plus Query: 487 ccttctcaacggcaagtggatcctcgcgtacacatc 522 ||||||||||||||| ||||||||||| | |||||| Sbjct: 482 ccttctcaacggcaaatggatcctcgcctgcacatc 517
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 48.1 bits (24), Expect = 0.030 Identities = 24/24 (100%) Strand = Plus / Minus Query: 201 cgctgcgggccgcgcggcgcgtcg 224 |||||||||||||||||||||||| Sbjct: 2710213 cgctgcgggccgcgcggcgcgtcg 2710190
>emb|Y15269.1|STY15269 Solanum tuberosum mRNA for CDSP34 protein Length = 1261 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Plus Query: 488 cttctcaacggcaagtggatcctcgcgtacacatc 522 |||||||||||||| ||||| || ||||||||||| Sbjct: 516 cttctcaacggcaaatggattcttgcgtacacatc 550
>emb|AJ131455.1|SDE131455 Solanum demissum mRNA for chloroplast fibrillin Length = 1199 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Plus Query: 488 cttctcaacggcaagtggatcctcgcgtacacatc 522 |||||||||||||| ||||| || ||||||||||| Sbjct: 478 cttctcaacggcaaatggattcttgcgtacacatc 512
>ref|XM_468631.1| Oryza sativa (japonica cultivar-group), mRNA Length = 345 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Minus Query: 300 cggaggcgccctcggaggcggc 321 |||||||||||||||||||||| Sbjct: 286 cggaggcgccctcggaggcggc 265
>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome Length = 6093698 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Minus Query: 174 tctccccggcggcccggcgctt 195 |||||||||||||||||||||| Sbjct: 253759 tctccccggcggcccggcgctt 253738
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 300 cggaggcgccctcggaggcggc 321 |||||||||||||||||||||| Sbjct: 16732801 cggaggcgccctcggaggcggc 16732822 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 208 ggccgcgcggcgcgtcgtcacggc 231 |||||||||||||||||| ||||| Sbjct: 26869900 ggccgcgcggcgcgtcgtgacggc 26869923 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 281 gagggagggacggcggtggc 300 |||||||||||||||||||| Sbjct: 6395634 gagggagggacggcggtggc 6395653
>gb|AC113433.8| Oryza sativa chromosome 3 BAC OSJNBb0108E08 genomic sequence, complete sequence Length = 129167 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 300 cggaggcgccctcggaggcggc 321 |||||||||||||||||||||| Sbjct: 83594 cggaggcgccctcggaggcggc 83615
>emb|BX927154.1| Corynebacterium glutamicum ATCC 13032, IS fingerprint type 4-5, complete genome; segment 7/10 Length = 349575 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Minus Query: 229 ggcgcgggcggttcccgtggac 250 |||||||||||||||||||||| Sbjct: 300239 ggcgcgggcggttcccgtggac 300218
>emb|AL161499.2|ATCHRIV11 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 11 Length = 198022 Score = 44.1 bits (22), Expect = 0.47 Identities = 25/26 (96%) Strand = Plus / Plus Query: 491 ctcaacggcaagtggatcctcgcgta 516 ||||||||||| |||||||||||||| Sbjct: 47379 ctcaacggcaaatggatcctcgcgta 47404
>emb|X95593.1|CSCHRCPRT C.sativus mRNA for carotenoid-associated protein CHRC Length = 1336 Score = 44.1 bits (22), Expect = 0.47 Identities = 28/30 (93%) Strand = Plus / Plus Query: 491 ctcaacggcaagtggatcctcgcgtacaca 520 ||||||||||||||||| || ||||||||| Sbjct: 513 ctcaacggcaagtggattctagcgtacaca 542
>gb|DQ122887.1| Chlamydomonas incerta mitochondrial cytochrome c oxidase subunit II (cox2b) mRNA, complete cds; nuclear gene for mitochondrial product Length = 715 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 347 ctcaagcagaagctcaaggcgg 368 |||||||||||||||||||||| Sbjct: 34 ctcaagcagaagctcaaggcgg 55
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 300 cggaggcgccctcggaggcggc 321 |||||||||||||||||||||| Sbjct: 16726434 cggaggcgccctcggaggcggc 16726455 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 208 ggccgcgcggcgcgtcgtcacggc 231 |||||||||||||||||| ||||| Sbjct: 26961223 ggccgcgcggcgcgtcgtgacggc 26961246 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 281 gagggagggacggcggtggc 300 |||||||||||||||||||| Sbjct: 6394847 gagggagggacggcggtggc 6394866
>dbj|BA000036.3| Corynebacterium glutamicum ATCC 13032 DNA, complete genome Length = 3309401 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Minus Query: 229 ggcgcgggcggttcccgtggac 250 |||||||||||||||||||||| Sbjct: 2423540 ggcgcgggcggttcccgtggac 2423519
>dbj|AK104174.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-C05, full insert sequence Length = 917 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Minus Query: 300 cggaggcgccctcggaggcggc 321 |||||||||||||||||||||| Sbjct: 422 cggaggcgccctcggaggcggc 401
>dbj|AK071843.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023117M08, full insert sequence Length = 1045 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Minus Query: 300 cggaggcgccctcggaggcggc 321 |||||||||||||||||||||| Sbjct: 557 cggaggcgccctcggaggcggc 536
>gb|AF075598.1|T24H24 Arabidopsis thaliana BAC T24H24 Length = 88848 Score = 44.1 bits (22), Expect = 0.47 Identities = 25/26 (96%) Strand = Plus / Minus Query: 491 ctcaacggcaagtggatcctcgcgta 516 ||||||||||| |||||||||||||| Sbjct: 70056 ctcaacggcaaatggatcctcgcgta 70031
>ref|NM_116640.3| Arabidopsis thaliana structural molecule AT4G04020 mRNA, complete cds Length = 1371 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 491 ctcaacggcaagtggatcctcgcgtacac 519 ||||||||||| ||||||||||| ||||| Sbjct: 434 ctcaacggcaaatggatcctcgcctacac 462
>ref|NM_197256.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0062C05.31), mRNA Length = 801 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 271 ggagccggcggagggagggacggcggtgg 299 |||||| | |||||||||||||||||||| Sbjct: 224 ggagccaggggagggagggacggcggtgg 252
>gb|BT017836.1| Zea mays clone EL01N0509F09.c mRNA sequence Length = 1379 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 419 gaggtcgtcgagctcatcacgcagctcgaggcg 451 |||||||||||||| |||| |||||||||||| Sbjct: 576 gaggtcgtcgagctagtcacccagctcgaggcg 608
>gb|AC084023.8| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0062C05 map S21174S, complete sequence Length = 178867 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 271 ggagccggcggagggagggacggcggtgg 299 |||||| | |||||||||||||||||||| Sbjct: 149410 ggagccaggggagggagggacggcggtgg 149438
>gb|AC125137.3| Mus musculus BAC clone RP24-324K9 from chromosome 6, complete sequence Length = 170336 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 107 gccgtgtccctgtccgtgccgtcgc 131 |||||||||||||||||||| |||| Sbjct: 145104 gccgtgtccctgtccgtgccttcgc 145080
>emb|AL354879.12| Human DNA sequence from clone RP11-4E23 on chromosome 9 Contains the 5' end of the MLLT3 gene for myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3 (AF9), a novel gene, the 5' end of a novel gene (FLJ2035, KIAA1797) and two CpG islands, complete sequence Length = 82270 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 447 aggcgcgcaaccccacgccgg 467 ||||||||||||||||||||| Sbjct: 74884 aggcgcgcaaccccacgccgg 74904
>gb|AY120766.2| Arabidopsis thaliana putative fibrillin (At4g04020) mRNA, complete cds Length = 1093 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 491 ctcaacggcaagtggatcctcgcgtacac 519 ||||||||||| ||||||||||| ||||| Sbjct: 435 ctcaacggcaaatggatcctcgcctacac 463
>gb|BT000148.1| Arabidopsis thaliana putative fibrillin (At4g04020) mRNA, complete cds Length = 1066 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 491 ctcaacggcaagtggatcctcgcgtacac 519 ||||||||||| ||||||||||| ||||| Sbjct: 424 ctcaacggcaaatggatcctcgcctacac 452
>emb|AJ421798.1|SCA421798 Streptomyces cattleya thienamycin gene cluster Length = 32329 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 201 cgctgcgggccgcgcggcgcg 221 ||||||||||||||||||||| Sbjct: 4388 cgctgcgggccgcgcggcgcg 4408
>gb|AC155839.4| Mus musculus 6 BAC RP24-96J4 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 173368 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 107 gccgtgtccctgtccgtgccgtcgc 131 |||||||||||||||||||| |||| Sbjct: 33706 gccgtgtccctgtccgtgccttcgc 33682
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 271 ggagccggcggagggagggacggcggtgg 299 |||||| | |||||||||||||||||||| Sbjct: 18851674 ggagccaggggagggagggacggcggtgg 18851702
>emb|BX828265.1|CNS0A2XC Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH6ZB04 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1356 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 491 ctcaacggcaagtggatcctcgcgtacac 519 ||||||||||| ||||||||||| ||||| Sbjct: 417 ctcaacggcaaatggatcctcgcctacac 445
>gb|AE004537.1| Pseudomonas aeruginosa PAO1, section 98 of 529 of the complete genome Length = 13946 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 204 tgcgggccgcgcggcgcgtcg 224 ||||||||||||||||||||| Sbjct: 6350 tgcgggccgcgcggcgcgtcg 6370
>gb|AY085330.1| Arabidopsis thaliana clone 1461 mRNA, complete sequence Length = 1140 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 491 ctcaacggcaagtggatcctcgcgtacac 519 ||||||||||| ||||||||||| ||||| Sbjct: 435 ctcaacggcaaatggatcctcgcctacac 463
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 271 ggagccggcggagggagggacggcggtgg 299 |||||| | |||||||||||||||||||| Sbjct: 18862928 ggagccaggggagggagggacggcggtgg 18862956
>ref|XM_507555.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1149_C12.25 mRNA Length = 1525 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 277 ggcggagggagggacggcggtggc 300 |||||||||||| ||||||||||| Sbjct: 171 ggcggagggaggaacggcggtggc 148
>ref|XM_507068.2| PREDICTED Oryza sativa (japonica cultivar-group), OJ1149_C12.25 mRNA Length = 1369 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 277 ggcggagggagggacggcggtggc 300 |||||||||||| ||||||||||| Sbjct: 239 ggcggagggaggaacggcggtggc 216
>ref|XM_468557.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1369 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 277 ggcggagggagggacggcggtggc 300 |||||||||||| ||||||||||| Sbjct: 239 ggcggagggaggaacggcggtggc 216
>ref|XM_469311.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3168 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 208 ggccgcgcggcgcgtcgtcacggc 231 |||||||||||||||||| ||||| Sbjct: 199 ggccgcgcggcgcgtcgtgacggc 176
>ref|XM_479409.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3127 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 243 ccgtggacgccgacgacgag 262 |||||||||||||||||||| Sbjct: 460 ccgtggacgccgacgacgag 441
>ref|XM_418264.1| PREDICTED: Gallus gallus similar to lung enriched kruppel like factor (LOC420148), mRNA Length = 1850 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 127 gtcgccccaggtaccgccgggggc 150 |||||||||||| ||||||||||| Sbjct: 132 gtcgccccaggtgccgccgggggc 109
>ref|XM_867515.1| PREDICTED: Bos taurus hypothetical protein LOC615653 (LOC615653), partial mRNA Length = 891 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 148 ggcgtcctctgcccgcggccgcct 171 |||| ||||||||||||||||||| Sbjct: 431 ggcgccctctgcccgcggccgcct 408
>ref|XM_390252.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG10076.1) partial mRNA Length = 2160 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 346 gctcaagcagaagctcaagg 365 |||||||||||||||||||| Sbjct: 681 gctcaagcagaagctcaagg 700
>emb|CR674167.2|CNS0FJ5P Tetraodon nigroviridis full-length cDNA Length = 1348 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 44 gaggaagaggagcacgagaaccga 67 |||||||||||| ||||||||||| Sbjct: 693 gaggaagaggaggacgagaaccga 716
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence Length = 3806533 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 379 gacggagcgcggcctgcgcg 398 |||||||||||||||||||| Sbjct: 2121322 gacggagcgcggcctgcgcg 2121303
>gb|AC087412.14| Oryza sativa chromosome 3 BAC OSJNBb0070O09 genomic sequence, complete sequence Length = 149303 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 208 ggccgcgcggcgcgtcgtcacggc 231 |||||||||||||||||| ||||| Sbjct: 48900 ggccgcgcggcgcgtcgtgacggc 48923
>emb|BX063239.1|CNS09KYJ Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC44DG11 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 910 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 244 cgtggacgccgacgacgagt 263 |||||||||||||||||||| Sbjct: 442 cgtggacgccgacgacgagt 423
>emb|BX046265.1|CNS097V1 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC2DD07 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 754 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 244 cgtggacgccgacgacgagt 263 |||||||||||||||||||| Sbjct: 423 cgtggacgccgacgacgagt 404
>gb|CP000088.1| Thermobifida fusca YX, complete genome Length = 3642249 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 232 gcgggcggttcccgtggacgccga 255 |||| ||||||||||||||||||| Sbjct: 3383734 gcggacggttcccgtggacgccga 3383757
>gb|AC105364.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1743A09, complete sequence Length = 146568 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 281 gagggagggacggcggtggc 300 |||||||||||||||||||| Sbjct: 75760 gagggagggacggcggtggc 75779
>emb|BX248359.1| Corynebacterium diphtheriae gravis NCTC13129, complete genome; segment 6/8 Length = 349895 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 329 gcaggcgagttggcggcgct 348 |||||||||||||||||||| Sbjct: 112359 gcaggcgagttggcggcgct 112378
>gb|BC062654.1| Mus musculus GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus, mRNA (cDNA clone IMAGE:6822390), complete cds Length = 3917 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 291 cggcggtggcggaggcgccctcgg 314 |||||||||||| ||||||||||| Sbjct: 1013 cggcggtggcggcggcgccctcgg 990
>emb|AL593857.10| Mouse DNA sequence from clone RP23-439H2 on chromosome 2, complete sequence Length = 206452 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 291 cggcggtggcggaggcgccctcgg 314 |||||||||||| ||||||||||| Sbjct: 185105 cggcggtggcggcggcgccctcgg 185082
>dbj|AK134628.1| Mus musculus adult male medulla oblongata cDNA, RIKEN full-length enriched library, clone:6330504O21 product:similar to DJ423B22.1 (Novel protein similar to KIAA0323, KIAA0615 and C.elegans C30F12.1) (Fragment) [Homo sapiens], full insert sequence Length = 1917 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 42 cagaggaagaggagcacgag 61 |||||||||||||||||||| Sbjct: 37 cagaggaagaggagcacgag 56
>tpg|BK001744.1| TPA: TPA_exp: Suid herpesvirus 1, complete genome Length = 143461 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 294 cggtggcggaggcgccctcggaggcggc 321 ||||||||| ||||||||||| |||||| Sbjct: 52636 cggtggcggcggcgccctcgggggcggc 52609
>ref|NM_001034907.1| Mus musculus RIKEN cDNA A130028J20 gene (A130028J20Rik), mRNA Length = 1917 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 42 cagaggaagaggagcacgag 61 |||||||||||||||||||| Sbjct: 37 cagaggaagaggagcacgag 56
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 243 ccgtggacgccgacgacgag 262 |||||||||||||||||||| Sbjct: 27703269 ccgtggacgccgacgacgag 27703288
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 284 ggagggacggcggtggcggaggcg 307 ||||||||||||||||||| |||| Sbjct: 19396812 ggagggacggcggtggcggcggcg 19396835
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 277 ggcggagggagggacggcggtggc 300 |||||||||||| ||||||||||| Sbjct: 35823679 ggcggagggaggaacggcggtggc 35823656
>gb|AF152375.1|AF152375 Mus musculus Gs alpha subunit (Gnas) gene, exons 1A, 1, and 2 and partial cds, alternatively spliced Length = 7345 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 291 cggcggtggcggaggcgccctcgg 314 |||||||||||| ||||||||||| Sbjct: 1647 cggcggtggcggcggcgccctcgg 1624
>dbj|AP003833.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1477_F01 Length = 158792 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 243 ccgtggacgccgacgacgag 262 |||||||||||||||||||| Sbjct: 82371 ccgtggacgccgacgacgag 82390
>dbj|AP005450.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0438E12 Length = 146851 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 284 ggagggacggcggtggcggaggcg 307 ||||||||||||||||||| |||| Sbjct: 101585 ggagggacggcggtggcggcggcg 101608
>dbj|AP004749.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0410C01 Length = 138424 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 284 ggagggacggcggtggcggaggcg 307 ||||||||||||||||||| |||| Sbjct: 15221 ggagggacggcggtggcggcggcg 15244
>dbj|AP005290.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1282_E10 Length = 107284 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 277 ggcggagggagggacggcggtggc 300 |||||||||||| ||||||||||| Sbjct: 14225 ggcggagggaggaacggcggtggc 14202
>dbj|AP004082.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1149_C12 Length = 120743 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 277 ggcggagggagggacggcggtggc 300 |||||||||||| ||||||||||| Sbjct: 94394 ggcggagggaggaacggcggtggc 94371
>emb|AL929537.17| Mouse DNA sequence from clone RP23-147E9 on chromosome 2, complete sequence Length = 93822 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 291 cggcggtggcggaggcgccctcgg 314 |||||||||||| ||||||||||| Sbjct: 28603 cggcggtggcggcggcgccctcgg 28626
>gb|AF218843.1|AF218843 Pseudorabies virus UL42 (UL42) gene, partial cds Length = 385 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 294 cggtggcggaggcgccctcggaggcggc 321 ||||||||| ||||||||||| |||||| Sbjct: 178 cggtggcggcggcgccctcgggggcggc 151
>ref|XM_321589.2| Anopheles gambiae str. PEST ENSANGP00000011698 (ENSANGG00000009209), partial mRNA Length = 1089 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 244 cgtggacgccgacgacgagt 263 |||||||||||||||||||| Sbjct: 261 cgtggacgccgacgacgagt 242
>dbj|AK102224.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033087M22, full insert sequence Length = 2187 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 284 ggagggacggcggtggcggaggcg 307 ||||||||||||||||||| |||| Sbjct: 1420 ggagggacggcggtggcggcggcg 1397
>dbj|AK100140.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023010P10, full insert sequence Length = 1368 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 277 ggcggagggagggacggcggtggc 300 |||||||||||| ||||||||||| Sbjct: 238 ggcggagggaggaacggcggtggc 215
>dbj|AK072277.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023010P11, full insert sequence Length = 1368 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 277 ggcggagggagggacggcggtggc 300 |||||||||||| ||||||||||| Sbjct: 238 ggcggagggaggaacggcggtggc 215
>dbj|AK071875.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013038A02, full insert sequence Length = 3128 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 243 ccgtggacgccgacgacgag 262 |||||||||||||||||||| Sbjct: 460 ccgtggacgccgacgacgag 441
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 346 gctcaagcagaagctcaagg 365 |||||||||||||||||||| Sbjct: 2305092 gctcaagcagaagctcaagg 2305073
>dbj|AK058645.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-018-E08, full insert sequence Length = 1525 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 277 ggcggagggagggacggcggtggc 300 |||||||||||| ||||||||||| Sbjct: 171 ggcggagggaggaacggcggtggc 148
>gb|AF010496.1|AF010496 Rhodobacter capsulatus strain SB1003, partial genome Length = 189370 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 219 gcgtcgtcacggcgcgggcg 238 |||||||||||||||||||| Sbjct: 112275 gcgtcgtcacggcgcgggcg 112256
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 gtcgcagaggaagaggagca 57 |||||||||||||||||||| Sbjct: 340389 gtcgcagaggaagaggagca 340408
>gb|U27481.1|SHU27481 Suid herpesvirus 1 UL42 homolog mRNA, partial cds Length = 522 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 294 cggtggcggaggcgccctcggaggcggc 321 ||||||||| ||||||||||| |||||| Sbjct: 356 cggtggcggcggcgccctcgggggcggc 329
>gb|M94355.1|SH1ULHOM Pseudorabies herpesvirus HSV-1 UL42 gene homologue gene, complete cds Length = 1155 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 294 cggtggcggaggcgccctcggaggcggc 321 ||||||||| ||||||||||| |||||| Sbjct: 1009 cggtggcggcggcgccctcgggggcggc 982
>emb|AL671982.4| Mouse DNA sequence from clone RP23-132H1 on chromosome X, complete sequence Length = 190627 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 42 cagaggaagaggagcacgag 61 |||||||||||||||||||| Sbjct: 142084 cagaggaagaggagcacgag 142103
>dbj|AB028186.1| Oryza sativa mRNA for OsNAC7 protein, complete cds Length = 1179 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 284 ggagggacggcggtggcggaggcg 307 ||||||||||||||||||| |||| Sbjct: 831 ggagggacggcggtggcggcggcg 808 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,492,672 Number of Sequences: 3902068 Number of extensions: 3492672 Number of successful extensions: 76302 Number of sequences better than 10.0: 96 Number of HSP's better than 10.0 without gapping: 100 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 74751 Number of HSP's gapped (non-prelim): 1551 length of query: 544 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 521 effective length of database: 17,143,297,704 effective search space: 8931658103784 effective search space used: 8931658103784 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
