Clone Name | bart46h06 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | Y593_PYRFU (Q8U378) UPF0282 protein PF0593 | 30 | 6.5 | 2 | FBXL5_HUMAN (Q9UKA1) F-box/LRR-repeat protein 5 (F-box and leuci... | 30 | 6.5 |
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>Y593_PYRFU (Q8U378) UPF0282 protein PF0593| Length = 310 Score = 29.6 bits (65), Expect = 6.5 Identities = 12/24 (50%), Positives = 15/24 (62%) Frame = +3 Query: 156 GDSVVLQYGDGRAEFLPPVADGRD 227 GDS +GD + EF PPV GR+ Sbjct: 138 GDSKTFDFGDFKIEFSPPVPHGRE 161
>FBXL5_HUMAN (Q9UKA1) F-box/LRR-repeat protein 5 (F-box and leucine-rich repeat| protein 5) (F-box protein FBL4/FBL5) (p45SKP2-like protein) Length = 691 Score = 29.6 bits (65), Expect = 6.5 Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 3/42 (7%) Frame = +1 Query: 163 QWFSNMVMDEPSFFHQWQTDATL---EQYTEQQIAVAFGQGE 279 +W N DE FH+W DA + E+ E+ IA++ Q E Sbjct: 273 EWVKNR-KDESRAFHEWDEDADIDESEESAEESIAISIAQME 313 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 41,499,291 Number of Sequences: 219361 Number of extensions: 645684 Number of successful extensions: 2234 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 2194 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2233 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4929664480 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)