>JJAZ_MOUSE (Q80U70) Polycomb protein Suz12 (Suppressor of zeste 12 protein|
           homolog)
          Length = 741

 Score = 37.7 bits (86), Expect = 0.023
 Identities = 20/52 (38%), Positives = 28/52 (53%)
 Frame = -3

Query: 543 PEYGAGPGGSGRTDLSMAAYLAAGEKGGWNCGGTGTAEGWSSAEH*WAGAPG 388
           P  G+G GG G +  ++AA  + G+ GG  CGG G+    SS+    A A G
Sbjct: 16  PSAGSGGGGFGGSAAAVAAAASGGKSGGGGCGGGGSYSASSSSAAAAAAAAG 67

>SUZ12_HUMAN (Q15022) Polycomb protein SUZ12 (Suppressor of zeste 12 protein|
           homolog) (Joined to JAZF1 protein) (Chromatin
           precipitated E2F target 9 protein) (ChET 9 protein)
          Length = 739

 Score = 35.0 bits (79), Expect = 0.15
 Identities = 17/43 (39%), Positives = 24/43 (55%)
 Frame = -3

Query: 543 PEYGAGPGGSGRTDLSMAAYLAAGEKGGWNCGGTGTAEGWSSA 415
           P  G+G GG G +    AA  + G+ GG +CGG G+    SS+
Sbjct: 16  PSAGSGGGGFGGSAAVAAATASGGKSGGGSCGGGGSYSASSSS 58

>APP1_SCHPO (Q9P7E8) Protein app1|
          Length = 857

 Score = 34.7 bits (78), Expect = 0.19
 Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
 Frame = +2

Query: 164 PRPPRLSVSKDSHKIRKPPVVPLPHGHGARQLQA---APANRHQQAQPRAPVIIYDASPK 334
           P+PP + V  ++ ++ +P V PLP     ++ Q      A  H Q      ++IYD SP+
Sbjct: 680 PQPPAVPVVPEAGQLNEPVVPPLPPHDETQEPQVGGDVKATEHTQPTKTPAIVIYDYSPE 739



 Score = 29.6 bits (65), Expect = 6.1
 Identities = 15/51 (29%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
 Frame = +2

Query: 164 PRPPRLSVSKDSHKIRKPPVVPL-PHGHGARQLQAAPANRHQQAQPRAPVI 313
           P+PP   V  ++  + +PP  P+ P    A Q  AAP      + P+ P +
Sbjct: 515 PQPPAAPVVPEAPSVHQPPAAPVAPEVPSAPQRPAAPVVPEAPSVPQRPAV 565

>BLNK_MOUSE (Q9QUN3) B-cell linker protein (Cytoplasmic adapter protein)|
           (B-cell adapter containing SH2 domain protein) (B-cell
           adapter containing Src homology 2 domain protein) (Src
           homology 2 domain-containing leukocyte protein of 65
           kDa) (Slp-65) (Lymp
          Length = 457

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 20/83 (24%), Positives = 37/83 (44%), Gaps = 3/83 (3%)
 Frame = +2

Query: 164 PRPPRLSVSKDSHKIRKPPVVPLPHGHGARQLQAAPANRHQQAQPRAPVI---IYDASPK 334
           P P   +  K +  ++  PV PLP+     + +  PA RH+ +  R   +   ++  + K
Sbjct: 243 PSPLPRAGKKPATPLKTTPVPPLPNASNVCEEKPVPAERHRGSSHRQDTVQSPVFPPTQK 302

Query: 335 VIHTQPGEFLALVQRLTGPGAPA 403
            +H +P      + R    G+PA
Sbjct: 303 PVHQKP----VPLPRFPEAGSPA 321

>ICAM5_RABIT (Q28730) Intercellular adhesion molecule 5 precursor (ICAM-5)|
           (Telencephalin)
          Length = 912

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 27/77 (35%), Positives = 31/77 (40%), Gaps = 8/77 (10%)
 Frame = -3

Query: 495 MAAYLAAGEKGGWNCGGTGT----AEGWSSAEH*WAGAPGPVRRWTSARNS----PGWVW 340
           + A LAA   GG   GG  T    AE W  A+  W   PG      S+ NS    PG + 
Sbjct: 739 VVAELAASPSGGVRPGGNFTLTCRAEAWPPAQISWRAPPGAPNIGLSSNNSTLSVPGAMG 798

Query: 339 MTLGEAS*MMTGARGWA 289
              GE     T A G A
Sbjct: 799 SHGGEYECEATNAHGHA 815

>FIBA1_PETMA (P02674) Fibrinogen alpha-1 chain precursor [Contains:|
           Fibrinopeptide A] (Fragment)
          Length = 966

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 5/47 (10%)
 Frame = -3

Query: 546 DPEYGAGPGGSGRTDLSMAAYLAAGEKGGWNCGG-----TGTAEGWS 421
           +P  G+G GGS  T         +G+ G W  GG     TG+A+G S
Sbjct: 695 EPNTGSGQGGSWSTGGRTEPNTGSGQGGSWGTGGRTEPNTGSAQGGS 741



 Score = 31.2 bits (69), Expect = 2.1
 Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 5/47 (10%)
 Frame = -3

Query: 546 DPEYGAGPGGSGRTDLSMAAYLAAGEKGGWNCGG-----TGTAEGWS 421
           +P  G+G GGS  T         +G+ G W  GG     TG+A+G S
Sbjct: 443 EPNTGSGQGGSWGTGGRTEPNTGSGQGGSWGTGGRTEPNTGSAQGGS 489



 Score = 30.4 bits (67), Expect = 3.6
 Identities = 28/102 (27%), Positives = 42/102 (41%), Gaps = 5/102 (4%)
 Frame = -3

Query: 546 DPEYGAGPGGSGRTDLSMAAYLAAGEKGGWNCGG-----TGTAEGWSSAEH*WAGAPGPV 382
           +P  G+G GGS  T         +G+ G W+ GG     TG+ +G S     W G  G  
Sbjct: 677 EPNTGSGQGGSWGTGGRTEPNTGSGQGGSWSTGGRTEPNTGSGQGGS-----W-GTGG-- 728

Query: 381 RRWTSARNSPGWVWMTLGEAS*MMTGARGWACWWRLAGAACS 256
           R   +  ++ G  W T G        A+G +  W   G+  +
Sbjct: 729 RTEPNTGSAQGGSWGTGGRTEPNTGSAQGGS--WGTGGSTAT 768



 Score = 29.6 bits (65), Expect = 6.1
 Identities = 26/89 (29%), Positives = 36/89 (40%), Gaps = 5/89 (5%)
 Frame = -3

Query: 546 DPEYGAGPGGSGRTDLSMAAYLAAGEKGGWNCGG-----TGTAEGWSSAEH*WAGAPGPV 382
           +P  G+G GGS  T         + + G W  GG     TG+A+G S     W G  G  
Sbjct: 461 EPNTGSGQGGSWGTGGRTEPNTGSAQGGSWGTGGRTEPNTGSAQGGS-----W-GTGG-- 512

Query: 381 RRWTSARNSPGWVWMTLGEAS*MMTGARG 295
           R   +  ++ G  W T G        A+G
Sbjct: 513 RTEPNTGSAQGGSWSTGGRTEPNTGSAKG 541



 Score = 29.6 bits (65), Expect = 6.1
 Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 5/47 (10%)
 Frame = -3

Query: 546 DPEYGAGPGGSGRTDLSMAAYLAAGEKGGWNCGG-----TGTAEGWS 421
           +P  G+G GGS  T         +G+ G W  GG     TG+ +G S
Sbjct: 425 EPNTGSGQGGSWGTGGRTEPNTGSGQGGSWGTGGRTEPNTGSGQGGS 471

>BRD4_HUMAN (O60885) Bromodomain-containing protein 4 (HUNK1 protein)|
          Length = 1362

 Score = 30.8 bits (68), Expect = 2.8
 Identities = 17/59 (28%), Positives = 25/59 (42%)
 Frame = +2

Query: 215  PPVVPLPHGHGARQLQAAPANRHQQAQPRAPVIIYDASPKVIHTQPGEFLALVQRLTGP 391
            PP+ P PH    +QLQ  P           P   +   P+ +H QP +F   +Q+   P
Sbjct: 956  PPLPPPPHPSVQQQLQQQPPPPPPPQPQPPPQQQHQPPPRPVHLQPMQFSTHIQQPPPP 1014

>PCAF_HUMAN (Q92831) Histone acetyltransferase PCAF (EC 2.3.1.48)|
           (P300/CBP-associated factor) (P/CAF) (Histone acetylase
           PCAF)
          Length = 832

 Score = 30.4 bits (67), Expect = 3.6
 Identities = 21/79 (26%), Positives = 35/79 (44%), Gaps = 5/79 (6%)
 Frame = +2

Query: 173 PRLSVSKDSHKIRKPPVVPLPHGHGARQLQAAPANRHQQAQPRAPVIIYDASPKVI---- 340
           P LS  KD   +R+ P+  +P   G R+    P+ + +  +PR P  +Y     ++    
Sbjct: 686 PGLSCFKDG--VRQIPIESIP---GIRETGWKPSGKEKSKEPRDPDQLYSTLKSILQQVK 740

Query: 341 -HTQPGEFLALVQRLTGPG 394
            H     F+  V+R   PG
Sbjct: 741 SHQSAWPFMEPVKRTEAPG 759

>GSK3A_HUMAN (P49840) Glycogen synthase kinase-3 alpha (EC 2.7.11.26) (GSK-3|
           alpha)
          Length = 483

 Score = 30.4 bits (67), Expect = 3.6
 Identities = 25/71 (35%), Positives = 30/71 (42%), Gaps = 1/71 (1%)
 Frame = -3

Query: 558 MSSQDPEYGAGPGGSGRT-DLSMAAYLAAGEKGGWNCGGTGTAEGWSSAEH*WAGAPGPV 382
           MS   P  G GPGGSGR    S A     G  GG   GG+ +  G +       GA G  
Sbjct: 1   MSGGGPS-GGGPGGSGRARTSSFAEPGGGGGGGGGGPGGSASGPGGTGGGKASVGAMGGG 59

Query: 381 RRWTSARNSPG 349
              +S+   PG
Sbjct: 60  VGASSSGGGPG 70

>WNK2_HUMAN (Q9Y3S1) Serine/threonine-protein kinase WNK2 (EC 2.7.11.1)|
           (Protein kinase with no lysine 2) (Protein kinase,
           lysine-deficient 2)
          Length = 2297

 Score = 30.4 bits (67), Expect = 3.6
 Identities = 23/61 (37%), Positives = 28/61 (45%), Gaps = 4/61 (6%)
 Frame = +2

Query: 248 ARQLQAAPANRHQQAQPRAPVIIYDASPKVIHTQ---PGEFLALVQRLTGP-GAPAHQCS 415
           AR   AAPA     AQP AP    DA P+ + TQ   P    A V+    P G P  + +
Sbjct: 89  ARGRPAAPAPAALVAQPGAPGAPADAGPEPVGTQEPGPDPIAAAVETAPAPDGGPREEAA 148

Query: 416 A 418
           A
Sbjct: 149 A 149

>BRO1_USTMA (Q4PHA8) Vacuolar protein-sorting protein BRO1 (BRO domain-containing|
            protein 1)
          Length = 1076

 Score = 30.4 bits (67), Expect = 3.6
 Identities = 23/83 (27%), Positives = 31/83 (37%)
 Frame = +2

Query: 161  GPRPPRLSVSKDSHKIRKPPVVPLPHGHGARQLQAAPANRHQQAQPRAPVIIYDASPKVI 340
            GP P  L   + +     PP  PLPH   + Q Q  PA       P + +          
Sbjct: 841  GPPPAALPGVRQTSNSGPPPPPPLPHQQASYQQQPPPAAAAPAHDPYSSMF--------- 891

Query: 341  HTQPGEFLALVQRLTGPGAPAHQ 409
                G F A +Q+   P +P HQ
Sbjct: 892  --SSGPFSAALQQ---PASPQHQ 909

>INO80_GIBZE (Q4IL82) Putative DNA helicase INO80 (EC 3.6.1.-)|
          Length = 1904

 Score = 30.0 bits (66), Expect = 4.7
 Identities = 28/77 (36%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
 Frame = +2

Query: 182 SVSKDSHKIRKPPVVPLPHGHGARQLQAAPANRHQQAQPRAPVIIYDASPKVIHTQPGEF 361
           S S  +H ++ PP   LP+ + +     AP      A P  PV I  +S       PG  
Sbjct: 104 STSSANHSLQSPPRPALPNPYMSSST-GAPGGPVAPALP-PPVGINSSS------SPGSS 155

Query: 362 LA-LVQRLTGPGAPAHQ 409
            A L QR   PGAPAHQ
Sbjct: 156 AAGLHQRHHQPGAPAHQ 172

>DED1_CRYNE (Q5KN36) ATP-dependent RNA helicase ded1 (EC 3.6.1.-)|
          Length = 637

 Score = 30.0 bits (66), Expect = 4.7
 Identities = 16/44 (36%), Positives = 16/44 (36%)
 Frame = -3

Query: 534 GAGPGGSGRTDLSMAAYLAAGEKGGWNCGGTGTAEGWSSAEH*W 403
           G G GG GRT      Y   G   GW  GG     G  S    W
Sbjct: 594 GGGYGGGGRTSGYGGGYGGGGGGAGWGSGGGFPPAGGDSGASWW 637

>OSBP1_HUMAN (P22059) Oxysterol-binding protein 1|
          Length = 807

 Score = 30.0 bits (66), Expect = 4.7
 Identities = 16/38 (42%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
 Frame = -3

Query: 534 GAGPGGSGRTDLSMAAYLAAGEKGGWNCGGTGTA-EGW 424
           G GPG  G      A     G  GG   GG+G+A EGW
Sbjct: 57  GPGPGAGGVAAAGPAPAPPTGGSGGSGAGGSGSAREGW 94

>LIPE_AERHY (P40600) Extracellular lipase precursor (EC 3.1.1.3)|
           (Triacylglycerol lipase)
          Length = 684

 Score = 30.0 bits (66), Expect = 4.7
 Identities = 27/91 (29%), Positives = 41/91 (45%), Gaps = 3/91 (3%)
 Frame = -3

Query: 534 GAGPGGSGRTDLSMAAYLAAGEKGGWNCGGTGTAEGWSSAEH*WAGAPGPVRRWTSARNS 355
           GAGP      DL      A G++GG   GG  +    S+A   W    G +   T++ N 
Sbjct: 469 GAGP------DLEDLCRHAGGQEGG--AGGDRS----SAARRAWLRLSGSMDTVTTSDNP 516

Query: 354 PGWV---WMTLGEAS*MMTGARGWACWWRLA 271
             ++   ++T+   +   + A  WAC WRLA
Sbjct: 517 TPYLNLSYLTVARDNLKQSVAICWACVWRLA 547

>SPD1_NEPCL (P19837) Spidroin 1 (Dragline silk fibroin 1) (Fragment)|
          Length = 747

 Score = 30.0 bits (66), Expect = 4.7
 Identities = 16/36 (44%), Positives = 17/36 (47%)
 Frame = -3

Query: 534 GAGPGGSGRTDLSMAAYLAAGEKGGWNCGGTGTAEG 427
           GAG GG G      AA  AAG  G    GG G  +G
Sbjct: 204 GAGRGGLGGQGAGAAAAAAAGGAGQGGLGGQGAGQG 239

>SNX15_HUMAN (Q9NRS6) Sorting nexin-15|
          Length = 342

 Score = 30.0 bits (66), Expect = 4.7
 Identities = 19/51 (37%), Positives = 24/51 (47%)
 Frame = +2

Query: 179 LSVSKDSHKIRKPPVVPLPHGHGARQLQAAPANRHQQAQPRAPVIIYDASP 331
           L VS+D H I  PP++P P     R  Q  PA R    +   PV    +SP
Sbjct: 132 LEVSRDLH-ILPPPLIPTPPPDDPRLSQLLPAERRGLEELEVPVDPPPSSP 181

>CNR14_CAEEL (P41830) Steroid hormone receptor family member cnr14|
          Length = 534

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = +2

Query: 224 VPLPHGHGARQLQAAPANRHQQAQPRAP 307
           +PLP  H  ++ Q  PA  HQ  QP+ P
Sbjct: 496 LPLPVNHNNQENQYTPAPEHQSPQPQQP 523

>LAMA5_HUMAN (O15230) Laminin alpha-5 chain precursor|
          Length = 3695

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
 Frame = +2

Query: 164  PRPPRLSVSKDSHKIRKPPVVPLPHGHGARQLQAAPANRHQQAQPRAPVII-YDASPKVI 340
            P+PP+  + +D   I  PP +PL H          PA      +PR P  +  DA P ++
Sbjct: 1226 PKPPQPIILRDCQVIPLPPGLPLTHAQ-----DLTPAMSPAGPRPRPPTAVDPDAEPTLL 1280

>NEB2_MOUSE (Q6R891) Neurabin-2 (Neurabin-II) (Spinophilin) (Protein|
           phosphatase 1 regulatory subunit 9B)
          Length = 817

 Score = 29.3 bits (64), Expect = 8.0
 Identities = 19/61 (31%), Positives = 26/61 (42%), Gaps = 13/61 (21%)
 Frame = +2

Query: 164 PRPPRLS---------VSKDSHKIRKPPVVPLPHGHGARQLQAAPAN----RHQQAQPRA 304
           P PPR +         V+K S   + PP  P P G GA + +  P      +H+ A  R 
Sbjct: 228 PGPPRAAGAPQVNSKLVTKRSRVFQPPPPPPAPSGDGATEKERGPGGQQPPQHRVAPARP 287

Query: 305 P 307
           P
Sbjct: 288 P 288

>CU36A_MANSE (Q8T634) Pupal cuticle protein 36a precursor (CP36a)|
          Length = 280

 Score = 29.3 bits (64), Expect = 8.0
 Identities = 15/40 (37%), Positives = 21/40 (52%)
 Frame = -3

Query: 534 GAGPGGSGRTDLSMAAYLAAGEKGGWNCGGTGTAEGWSSA 415
           GAG GG+G    +      AG  GG+  GG G A G +++
Sbjct: 229 GAGAGGAGGYSGAGGCSGGAGGAGGFGAGGAGRAGGTATS 268

>ARI1B_HUMAN (Q8NFD5) AT-rich interactive domain-containing protein 1B (ARID|
           domain-containing protein 1B) (Osa homolog 2) (hOsa2)
           (p250R) (BRG1-binding protein hELD/OSA1)
           (BRG1-associated factor 250b) (BAF250B)
          Length = 2236

 Score = 29.3 bits (64), Expect = 8.0
 Identities = 15/32 (46%), Positives = 18/32 (56%)
 Frame = -3

Query: 534 GAGPGGSGRTDLSMAAYLAAGEKGGWNCGGTG 439
           GAG GG+G   ++ AA  AA   GG   GG G
Sbjct: 328 GAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYG 359

>CEA7_ECOLI (Q47112) Colicin-E7 (EC 3.1.-.-)|
          Length = 576

 Score = 29.3 bits (64), Expect = 8.0
 Identities = 18/54 (33%), Positives = 19/54 (35%), Gaps = 4/54 (7%)
 Frame = -3

Query: 522 GGSGRTDLSMAAYLAAGEKGG----WNCGGTGTAEGWSSAEH*WAGAPGPVRRW 373
           GG GR   S A        GG       GG     GWSS  + W G  G    W
Sbjct: 3   GGDGRGHNSGAHNTGGNINGGPTGLGGNGGASDGSGWSSENNPWGGGSGSGVHW 56

>LORI_MOUSE (P18165) Loricrin|
          Length = 486

 Score = 29.3 bits (64), Expect = 8.0
 Identities = 20/63 (31%), Positives = 27/63 (42%)
 Frame = -3

Query: 534 GAGPGGSGRTDLSMAAYLAAGEKGGWNCGGTGTAEGWSSAEH*WAGAPGPVRRWTSARNS 355
           G G G SG +        + G  GG +CGG G++ G S       G   PV   T  + +
Sbjct: 427 GCGGGSSGGSGGGCGGGYSGGGGGGSSCGG-GSSGGGSG-----GGKGVPVCHQTQQKQA 480

Query: 354 PGW 346
           P W
Sbjct: 481 PTW 483



 Score = 29.3 bits (64), Expect = 8.0
 Identities = 15/48 (31%), Positives = 21/48 (43%)
 Frame = -3

Query: 531 AGPGGSGRTDLSMAAYLAAGEKGGWNCGGTGTAEGWSSAEH*WAGAPG 388
           +G GG G +          G  GG +CGG  +  G SS    ++G  G
Sbjct: 264 SGGGGGGSSQQYQCQSYGGGSSGGSSCGGRYSGGGGSSCGGGYSGGGG 311


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 47,262,987
Number of Sequences: 219361
Number of extensions: 795180
Number of successful extensions: 4025
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 3567
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3985
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4643056080
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)