ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart46h05 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 131 bits (66), Expect = 3e-27 Identities = 90/98 (91%) Strand = Plus / Plus Query: 293 cagccgcgggcgccggtcatcatctacgacgcctcgcccaaggtcatccacacccagccc 352 |||||||||||||||||||||||||||||||||||||| ||||| || |||||| |||| Sbjct: 20020562 cagccgcgggcgccggtcatcatctacgacgcctcgccgaaggttattcacaccaggccc 20020621 Query: 353 ggcgagttcctggcgctcgtccagcgcctcaccggccc 390 |||||||| |||||||||||||||||||||| ||||| Sbjct: 20020622 agcgagttcatggcgctcgtccagcgcctcactggccc 20020659 Score = 119 bits (60), Expect = 1e-23 Identities = 75/80 (93%) Strand = Plus / Plus Query: 151 gcagctgcagggcccgcggcccccgcggctgtccgtcagcaaggactcccacaagatcag 210 |||||||||||||||||| || ||||||||| ||||||||||||||||||||||| |||| Sbjct: 20020426 gcagctgcagggcccgcgcccgccgcggctggccgtcagcaaggactcccacaaggtcag 20020485 Query: 211 gaagccgccggtcgtgccgc 230 ||||||||| |||||||||| Sbjct: 20020486 gaagccgcccgtcgtgccgc 20020505 Score = 67.9 bits (34), Expect = 3e-08 Identities = 37/38 (97%) Strand = Plus / Plus Query: 479 gcgaggtacgccgccatcgagaggtccgtccggccgct 516 ||||||||||||||||||||||||||||| |||||||| Sbjct: 20020817 gcgaggtacgccgccatcgagaggtccgtacggccgct 20020854 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 101 gcgccgccgtcggaggaggag 121 ||||||||||||||||||||| Sbjct: 26046907 gcgccgccgtcggaggaggag 26046927
>dbj|AP005609.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0014M17 Length = 156778 Score = 131 bits (66), Expect = 3e-27 Identities = 90/98 (91%) Strand = Plus / Plus Query: 293 cagccgcgggcgccggtcatcatctacgacgcctcgcccaaggtcatccacacccagccc 352 |||||||||||||||||||||||||||||||||||||| ||||| || |||||| |||| Sbjct: 124683 cagccgcgggcgccggtcatcatctacgacgcctcgccgaaggttattcacaccaggccc 124742 Query: 353 ggcgagttcctggcgctcgtccagcgcctcaccggccc 390 |||||||| |||||||||||||||||||||| ||||| Sbjct: 124743 agcgagttcatggcgctcgtccagcgcctcactggccc 124780 Score = 119 bits (60), Expect = 1e-23 Identities = 75/80 (93%) Strand = Plus / Plus Query: 151 gcagctgcagggcccgcggcccccgcggctgtccgtcagcaaggactcccacaagatcag 210 |||||||||||||||||| || ||||||||| ||||||||||||||||||||||| |||| Sbjct: 124547 gcagctgcagggcccgcgcccgccgcggctggccgtcagcaaggactcccacaaggtcag 124606 Query: 211 gaagccgccggtcgtgccgc 230 ||||||||| |||||||||| Sbjct: 124607 gaagccgcccgtcgtgccgc 124626 Score = 67.9 bits (34), Expect = 3e-08 Identities = 37/38 (97%) Strand = Plus / Plus Query: 479 gcgaggtacgccgccatcgagaggtccgtccggccgct 516 ||||||||||||||||||||||||||||| |||||||| Sbjct: 124938 gcgaggtacgccgccatcgagaggtccgtacggccgct 124975
>ref|XM_472436.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 927 Score = 101 bits (51), Expect = 2e-18 Identities = 87/99 (87%) Strand = Plus / Plus Query: 295 gccgcgggcgccggtcatcatctacgacgcctcgcccaaggtcatccacacccagcccgg 354 ||||||||||||||| |||||||||||||| ||||| ||| | |||||| || ||||| Sbjct: 237 gccgcgggcgccggtgatcatctacgacgcgtcgccgaagattatccacgccaagcccaa 296 Query: 355 cgagttcctggcgctcgtccagcgcctcaccggcccggg 393 ||||||| |||||||||| ||||| |||||||||||||| Sbjct: 297 cgagttcatggcgctcgtgcagcggctcaccggcccggg 335 Score = 44.1 bits (22), Expect = 0.49 Identities = 28/30 (93%) Strand = Plus / Plus Query: 151 gcagctgcagggcccgcggcccccgcggct 180 |||||| ||||||||||| ||||||||||| Sbjct: 81 gcagcttcagggcccgcgccccccgcggct 110 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 492 ccatcgagaggtccgtccggccgctgcc 519 ||||||||||||||||||| ||| |||| Sbjct: 482 ccatcgagaggtccgtccgcccgatgcc 509
>emb|AL606598.3|OSJN00036 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0033G16, complete sequence Length = 114051 Score = 101 bits (51), Expect = 2e-18 Identities = 87/99 (87%) Strand = Plus / Plus Query: 295 gccgcgggcgccggtcatcatctacgacgcctcgcccaaggtcatccacacccagcccgg 354 ||||||||||||||| |||||||||||||| ||||| ||| | |||||| || ||||| Sbjct: 68224 gccgcgggcgccggtgatcatctacgacgcgtcgccgaagattatccacgccaagcccaa 68283 Query: 355 cgagttcctggcgctcgtccagcgcctcaccggcccggg 393 ||||||| |||||||||| ||||| |||||||||||||| Sbjct: 68284 cgagttcatggcgctcgtgcagcggctcaccggcccggg 68322 Score = 44.1 bits (22), Expect = 0.49 Identities = 28/30 (93%) Strand = Plus / Plus Query: 151 gcagctgcagggcccgcggcccccgcggct 180 |||||| ||||||||||| ||||||||||| Sbjct: 68068 gcagcttcagggcccgcgccccccgcggct 68097 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 492 ccatcgagaggtccgtccggccgctgcc 519 ||||||||||||||||||| ||| |||| Sbjct: 68469 ccatcgagaggtccgtccgcccgatgcc 68496
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 101 bits (51), Expect = 2e-18 Identities = 87/99 (87%) Strand = Plus / Plus Query: 295 gccgcgggcgccggtcatcatctacgacgcctcgcccaaggtcatccacacccagcccgg 354 ||||||||||||||| |||||||||||||| ||||| ||| | |||||| || ||||| Sbjct: 20633790 gccgcgggcgccggtgatcatctacgacgcgtcgccgaagattatccacgccaagcccaa 20633849 Query: 355 cgagttcctggcgctcgtccagcgcctcaccggcccggg 393 ||||||| |||||||||| ||||| |||||||||||||| Sbjct: 20633850 cgagttcatggcgctcgtgcagcggctcaccggcccggg 20633888 Score = 44.1 bits (22), Expect = 0.49 Identities = 28/30 (93%) Strand = Plus / Plus Query: 151 gcagctgcagggcccgcggcccccgcggct 180 |||||| ||||||||||| ||||||||||| Sbjct: 20633634 gcagcttcagggcccgcgccccccgcggct 20633663 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 102 cgccgccgtcggaggaggag 121 |||||||||||||||||||| Sbjct: 21281529 cgccgccgtcggaggaggag 21281548 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 492 ccatcgagaggtccgtccggccgctgcc 519 ||||||||||||||||||| ||| |||| Sbjct: 20634035 ccatcgagaggtccgtccgcccgatgcc 20634062
>ref|NM_185772.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 198 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 484 gtacgccgccatcgagaggtccgtccggcc 513 |||||||||||||||||||||||| ||||| Sbjct: 159 gtacgccgccatcgagaggtccgtacggcc 130
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 484 gtacgccgccatcgagaggtccgtccggcc 513 |||||||||||||||||||||||| ||||| Sbjct: 9237046 gtacgccgccatcgagaggtccgtacggcc 9237017 Score = 44.1 bits (22), Expect = 0.49 Identities = 64/78 (82%) Strand = Plus / Minus Query: 326 tcgcccaaggtcatccacacccagcccggcgagttcctggcgctcgtccagcgcctcacc 385 ||||||||| |||||||| | || || ||||||| || |||| || ||||| |||||| Sbjct: 23480655 tcgcccaagatcatccacgtcgaggcccacgagttcatgtcgctggtgcagcggctcacc 23480596 Query: 386 ggcccgggcgcgccggcc 403 |||||||| ||| ||||| Sbjct: 23480595 ggcccgggggcggcggcc 23480578
>dbj|AP003491.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0662B01 Length = 155913 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 484 gtacgccgccatcgagaggtccgtccggcc 513 |||||||||||||||||||||||| ||||| Sbjct: 131068 gtacgccgccatcgagaggtccgtacggcc 131039
>dbj|AP005813.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0676F10 Length = 142510 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 484 gtacgccgccatcgagaggtccgtccggcc 513 |||||||||||||||||||||||| ||||| Sbjct: 4387 gtacgccgccatcgagaggtccgtacggcc 4358
>gb|BC050747.1| Mus musculus pumilio 1 (Drosophila), mRNA (cDNA clone MGC:58112 IMAGE:6593374), complete cds Length = 4037 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 138 gcagcaggcagctgcagctgcag 160 ||||||||||||||||||||||| Sbjct: 1518 gcagcaggcagctgcagctgcag 1540
>ref|NM_030722.1| Mus musculus pumilio 1 (Drosophila) (Pum1), mRNA Length = 5029 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 138 gcagcaggcagctgcagctgcag 160 ||||||||||||||||||||||| Sbjct: 1518 gcagcaggcagctgcagctgcag 1540
>dbj|AB243411.1| Bradyrhizobium japonicum DNA, mini-Tn5-flanking sequence, strain: mutant 5C1 Length = 2008 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 263 gccgcccccgccaaccgccaccagcag 289 |||||| |||||||||||||||||||| Sbjct: 63 gccgccgccgccaaccgccaccagcag 89
>dbj|AK141921.1| Mus musculus 12 days embryo spinal ganglion cDNA, RIKEN full-length enriched library, clone:D130063J01 product:pumilio 1 (Drosophila), full insert sequence Length = 5319 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 138 gcagcaggcagctgcagctgcag 160 ||||||||||||||||||||||| Sbjct: 1545 gcagcaggcagctgcagctgcag 1567
>dbj|AK147185.1| Mus musculus 17 days embryo heart cDNA, RIKEN full-length enriched library, clone:I920195H24 product:pumilio 1 (Drosophila), full insert sequence Length = 4586 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 138 gcagcaggcagctgcagctgcag 160 ||||||||||||||||||||||| Sbjct: 791 gcagcaggcagctgcagctgcag 813
>dbj|AK154059.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN full-length enriched library, clone:E430031D14 product:pumilio 1 (Drosophila), full insert sequence Length = 3721 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 138 gcagcaggcagctgcagctgcag 160 ||||||||||||||||||||||| Sbjct: 1143 gcagcaggcagctgcagctgcag 1165
>dbj|AK161135.1| Mus musculus 10 days neonate skin cDNA, RIKEN full-length enriched library, clone:4732465P08 product:pumilio 1 (Drosophila), full insert sequence Length = 4535 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 138 gcagcaggcagctgcagctgcag 160 ||||||||||||||||||||||| Sbjct: 1251 gcagcaggcagctgcagctgcag 1273
>dbj|AK163977.1| Mus musculus ES cells cDNA, RIKEN full-length enriched library, clone:C330024P05 product:pumilio 1 (Drosophila), full insert sequence Length = 4120 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 138 gcagcaggcagctgcagctgcag 160 ||||||||||||||||||||||| Sbjct: 1536 gcagcaggcagctgcagctgcag 1558
>dbj|AK162742.1| Mus musculus 16 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A130009G24 product:pumilio 1 (Drosophila), full insert sequence Length = 4478 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 138 gcagcaggcagctgcagctgcag 160 ||||||||||||||||||||||| Sbjct: 1478 gcagcaggcagctgcagctgcag 1500
>gb|AF321909.1| Mus musculus pumilio 1 (Pumm1) mRNA, complete cds Length = 5029 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 138 gcagcaggcagctgcagctgcag 160 ||||||||||||||||||||||| Sbjct: 1518 gcagcaggcagctgcagctgcag 1540
>gb|BC048174.1| Mus musculus pumilio 1 (Drosophila), mRNA (cDNA clone MGC:61243 IMAGE:6825203), complete cds Length = 4002 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 138 gcagcaggcagctgcagctgcag 160 ||||||||||||||||||||||| Sbjct: 1498 gcagcaggcagctgcagctgcag 1520
>dbj|AK122205.1| Mus musculus mRNA for mKIAA0099 protein Length = 5329 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 138 gcagcaggcagctgcagctgcag 160 ||||||||||||||||||||||| Sbjct: 1528 gcagcaggcagctgcagctgcag 1550
>emb|BX004791.6| Mouse DNA sequence from clone RP24-233L10 on chromosome 4, complete sequence Length = 123244 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 138 gcagcaggcagctgcagctgcag 160 ||||||||||||||||||||||| Sbjct: 117574 gcagcaggcagctgcagctgcag 117596
>ref|XM_469713.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3150 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 8 aaagcacgctcgtcttcttcct 29 |||||||||||||||||||||| Sbjct: 1889 aaagcacgctcgtcttcttcct 1910
>gb|AY389733.1| Hyacinthus orientalis lysophospholipase mRNA, partial cds Length = 774 Score = 44.1 bits (22), Expect = 0.49 Identities = 28/30 (93%) Strand = Plus / Plus Query: 502 gtccgtccggccgctgccgccgggccccgc 531 |||| |||| |||||||||||||||||||| Sbjct: 160 gtccttccgcccgctgccgccgggccccgc 189
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 511 gccgctgccgccgggccccgcg 532 |||||||||||||||||||||| Sbjct: 2359051 gccgctgccgccgggccccgcg 2359072
>ref|XM_419975.1| PREDICTED: Gallus gallus similar to pumilio homolog 2; pumilio (Drosphila) homolog 2 (LOC421964), mRNA Length = 1835 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Minus Query: 509 cggccgctgccgccgggccccgcgcc 534 ||||| |||||||||||||||||||| Sbjct: 646 cggcccctgccgccgggccccgcgcc 621
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 8 aaagcacgctcgtcttcttcct 29 |||||||||||||||||||||| Sbjct: 30360105 aaagcacgctcgtcttcttcct 30360126 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 479 gcgaggtacgccgccatcgagaggtc 504 |||||||| ||||||||||||||||| Sbjct: 8816720 gcgaggtatgccgccatcgagaggtc 8816745 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 111 cggaggaggaggagcggcag 130 |||||||||||||||||||| Sbjct: 10878135 cggaggaggaggagcggcag 10878154
>emb|BX842578.1| Mycobacterium tuberculosis H37Rv complete genome; segment 7/13 Length = 346186 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 511 gccgctgccgccgggccccgcg 532 |||||||||||||||||||||| Sbjct: 278080 gccgctgccgccgggccccgcg 278101
>emb|BX248341.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 8/14 Length = 306050 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 511 gccgctgccgccgggccccgcg 532 |||||||||||||||||||||| Sbjct: 133626 gccgctgccgccgggccccgcg 133647
>gb|AC087852.11| Oryza sativa chromosome 3 BAC OJ1124_H03 genomic sequence, complete sequence Length = 149380 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 8 aaagcacgctcgtcttcttcct 29 |||||||||||||||||||||| Sbjct: 116910 aaagcacgctcgtcttcttcct 116889
>gb|AC139168.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJA1364E02, complete sequence Length = 126027 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 479 gcgaggtacgccgccatcgagaggtc 504 |||||||| ||||||||||||||||| Sbjct: 7608 gcgaggtatgccgccatcgagaggtc 7633
>gb|AC135208.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1364E02, complete sequence Length = 112265 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 479 gcgaggtacgccgccatcgagaggtc 504 |||||||| ||||||||||||||||| Sbjct: 59873 gcgaggtatgccgccatcgagaggtc 59898
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 8 aaagcacgctcgtcttcttcct 29 |||||||||||||||||||||| Sbjct: 30451527 aaagcacgctcgtcttcttcct 30451548 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 479 gcgaggtacgccgccatcgagaggtc 504 |||||||| ||||||||||||||||| Sbjct: 8814555 gcgaggtatgccgccatcgagaggtc 8814580 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 111 cggaggaggaggagcggcag 130 |||||||||||||||||||| Sbjct: 10876236 cggaggaggaggagcggcag 10876255
>gb|AC010148.13| Homo sapiens BAC clone RP11-367B19 from 2, complete sequence Length = 231562 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 139 cagcaggcagctgcagctgcag 160 |||||||||||||||||||||| Sbjct: 139280 cagcaggcagctgcagctgcag 139259
>dbj|AP003615.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0486H12 Length = 179085 Score = 44.1 bits (22), Expect = 0.49 Identities = 64/78 (82%) Strand = Plus / Minus Query: 326 tcgcccaaggtcatccacacccagcccggcgagttcctggcgctcgtccagcgcctcacc 385 ||||||||| |||||||| | || || ||||||| || |||| || ||||| |||||| Sbjct: 140210 tcgcccaagatcatccacgtcgaggcccacgagttcatgtcgctggtgcagcggctcacc 140151 Query: 386 ggcccgggcgcgccggcc 403 |||||||| ||| ||||| Sbjct: 140150 ggcccgggggcggcggcc 140133
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 160 gggcccgcggcccccgcggctg 181 |||||||||||||||||||||| Sbjct: 3657049 gggcccgcggcccccgcggctg 3657028
>emb|AL773595.10| Mouse DNA sequence from clone RP23-297I16 on chromosome 2, complete sequence Length = 173925 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 420 aggaccatccctctgccgtgcc 441 |||||||||||||||||||||| Sbjct: 58396 aggaccatccctctgccgtgcc 58417
>ref|XM_508743.1| PREDICTED: Pan troglodytes similar to exophilin 5 (LOC451533), mRNA Length = 7605 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 145 gcagctgcagctgcagggcccgcgg 169 ||||||||||| ||||||||||||| Sbjct: 5869 gcagctgcagcagcagggcccgcgg 5845
>ref|XM_467034.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1199 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 101 gcgccgccgtcggaggaggag 121 ||||||||||||||||||||| Sbjct: 532 gcgccgccgtcggaggaggag 552
>gb|CP000127.1| Nitrosococcus oceani ATCC 19707, complete genome Length = 3481691 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 96 tggacgcgccgccgtcggagg 116 ||||||||||||||||||||| Sbjct: 3289839 tggacgcgccgccgtcggagg 3289859
>ref|XM_880846.1| PREDICTED: Bos taurus hypothetical protein LOC615872 (LOC615872), mRNA Length = 1411 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 151 gcagctgcagggcccgcggcccccg 175 ||||| ||||||||||||||||||| Sbjct: 975 gcagcagcagggcccgcggcccccg 951
>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome Length = 5650368 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 244 cggagcccggcaactgcaagc 264 ||||||||||||||||||||| Sbjct: 942157 cggagcccggcaactgcaagc 942177
>ref|NM_153705.2| Homo sapiens KDEL (Lys-Asp-Glu-Leu) containing 2 (KDELC2), mRNA Length = 4269 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 145 gcagctgcagctgcagggcccgcgg 169 ||||||||||| ||||||||||||| Sbjct: 62 gcagctgcagcagcagggcccgcgg 38
>ref|XM_548446.2| PREDICTED: Canis familiaris similar to cyclin-dependent kinase 9 (LOC491325), mRNA Length = 1605 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 105 cgccgtcggaggaggaggagc 125 ||||||||||||||||||||| Sbjct: 43 cgccgtcggaggaggaggagc 63
>gb|AY281353.1| Uncultured Acidobacteria bacterium clone 32d1 genomic sequence Length = 35153 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 129 agtcgccgcgcagcaggcagc 149 ||||||||||||||||||||| Sbjct: 23838 agtcgccgcgcagcaggcagc 23858
>emb|AL162586.26| Human DNA sequence from clone RP11-228B15 on chromosome 9 Contains the 5' end of the SH2D3C gene for SH2 domain containing 3C (CHAT,NSP3), the CDK9 gene for cyclin-dependent kinase 9 (CDC2-related kinase) (TAK, C-2k, CDC2L4, PITALRE), the FPGS gene for folylpolyglutamate synthase (folylpolyglutamate synthetase), the 3' end fo the ENG gene for endoglin (Osler-Rendu-Weber syndrome 1)(END, ORW, HHT1, ORW1, CD105), a novel gene and five CpG islands, complete sequence Length = 80642 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 105 cgccgtcggaggaggaggagc 125 ||||||||||||||||||||| Sbjct: 37680 cgccgtcggaggaggaggagc 37700
>gb|AF533708.1| Homo sapiens tissue-type testis unknown protein mRNA, complete cds Length = 4269 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 145 gcagctgcagctgcagggcccgcgg 169 ||||||||||| ||||||||||||| Sbjct: 62 gcagctgcagcagcagggcccgcgg 38
>gb|BC036526.2| Homo sapiens KDEL (Lys-Asp-Glu-Leu) containing 2, mRNA (cDNA clone MGC:33424 IMAGE:5266665), complete cds Length = 4294 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 145 gcagctgcagctgcagggcccgcgg 169 ||||||||||| ||||||||||||| Sbjct: 57 gcagctgcagcagcagggcccgcgg 33
>gb|DQ397611.1| Cenarchaeum symbiosum clone C15A07, complete sequence Length = 43680 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 516 tgccgccgggccccgcgccgt 536 ||||||||||||||||||||| Sbjct: 33653 tgccgccgggccccgcgccgt 33673
>gb|DQ397598.1| Cenarchaeum symbiosum clone C06E05, complete sequence Length = 42858 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 516 tgccgccgggccccgcgccgt 536 ||||||||||||||||||||| Sbjct: 26473 tgccgccgggccccgcgccgt 26493
>gb|DQ397591.1| Cenarchaeum symbiosum clone C01G08, complete sequence Length = 41923 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 516 tgccgccgggccccgcgccgt 536 ||||||||||||||||||||| Sbjct: 1227 tgccgccgggccccgcgccgt 1247
>gb|AF517840.1| Homo sapiens cyclin-dependent kinase 9 (CDC2-related kinase) (CDK9) gene, complete cds Length = 6333 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 105 cgccgtcggaggaggaggagc 125 ||||||||||||||||||||| Sbjct: 1297 cgccgtcggaggaggaggagc 1317
>ref|NM_142644.1| Drosophila melanogaster CG5466-RA (CG5466), mRNA Length = 2879 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 437 gtgccggtgccgccgcagttccagc 461 |||||||||||||||||||| |||| Sbjct: 977 gtgccggtgccgccgcagttgcagc 1001
>gb|AY060383.1| Drosophila melanogaster LD27620 full length cDNA Length = 1979 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 437 gtgccggtgccgccgcagttccagc 461 |||||||||||||||||||| |||| Sbjct: 49 gtgccggtgccgccgcagttgcagc 73
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 151 gcagctgcagggcccgcggcccccgcggc 179 ||||| ||||||||||||| ||||||||| Sbjct: 4822512 gcagcggcagggcccgcggaccccgcggc 4822540
>gb|AE016814.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome I, complete sequence Length = 691920 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 133 gccgcgcagcaggcagctgca 153 ||||||||||||||||||||| Sbjct: 591272 gccgcgcagcaggcagctgca 591292
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 502 gtccgtccggccgctgccgcc 522 ||||||||||||||||||||| Sbjct: 43209225 gtccgtccggccgctgccgcc 43209205 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 101 gcgccgccgtcggaggaggaggag 124 ||||||||||| |||||||||||| Sbjct: 6791857 gcgccgccgtccgaggaggaggag 6791880
>gb|AF327569.1|AF327569 Mus musculus cyclin-dependent kinase 9 (Cdk9) gene, complete cds Length = 5719 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 105 cgccgtcggaggaggaggagc 125 ||||||||||||||||||||| Sbjct: 47 cgccgtcggaggaggaggagc 67
>gb|AC007771.7|AC007771 Drosophila melanogaster, chromosome 3R, region 92E-92F, BAC clone BACR26M03, complete sequence Length = 197071 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 437 gtgccggtgccgccgcagttccagc 461 |||||||||||||||||||| |||| Sbjct: 29074 gtgccggtgccgccgcagttgcagc 29098
>gb|AC007757.5|AC007757 Drosophila melanogaster, chromosome 3R, region 92E-92F, BAC clone BACR13J19, complete sequence Length = 170939 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 437 gtgccggtgccgccgcagttccagc 461 |||||||||||||||||||| |||| Sbjct: 141046 gtgccggtgccgccgcagttgcagc 141070
>dbj|AP003228.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0020E09 Length = 149195 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 502 gtccgtccggccgctgccgcc 522 ||||||||||||||||||||| Sbjct: 96680 gtccgtccggccgctgccgcc 96660
>gb|BT024452.1| Drosophila melanogaster GH15831 full insert cDNA Length = 2893 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 437 gtgccggtgccgccgcagttccagc 461 |||||||||||||||||||| |||| Sbjct: 972 gtgccggtgccgccgcagttgcagc 996
>gb|AF255306.1|AF255306 Homo sapiens protein kinase CDK9 (CDK9) gene, complete cds Length = 5572 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 105 cgccgtcggaggaggaggagc 125 ||||||||||||||||||||| Sbjct: 1193 cgccgtcggaggaggaggagc 1213
>dbj|AP004839.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0519A12 Length = 156676 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 101 gcgccgccgtcggaggaggag 121 ||||||||||||||||||||| Sbjct: 54353 gcgccgccgtcggaggaggag 54373
>dbj|AP005306.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0030D07 Length = 133321 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 101 gcgccgccgtcggaggaggag 121 ||||||||||||||||||||| Sbjct: 110780 gcgccgccgtcggaggaggag 110800
>dbj|BS000240.1| Pan troglodytes chromosome 22 clone:RP43-055A16, map 22, complete sequences Length = 185079 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 275 aaccgccaccagcaggcccag 295 ||||||||||||||||||||| Sbjct: 137687 aaccgccaccagcaggcccag 137667
>dbj|AK071507.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023090D24, full insert sequence Length = 1200 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 101 gcgccgccgtcggaggaggag 121 ||||||||||||||||||||| Sbjct: 532 gcgccgccgtcggaggaggag 552
>ref|NM_208034.1| Eremothecium gossypii AAR139Wp (AAR139W), mRNA Length = 1317 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 133 gccgcgcagcaggcagctgca 153 ||||||||||||||||||||| Sbjct: 451 gccgcgcagcaggcagctgca 471
>gb|AE003731.3| Drosophila melanogaster chromosome 3R, section 69 of 118 of the complete sequence Length = 230001 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 437 gtgccggtgccgccgcagttccagc 461 |||||||||||||||||||| |||| Sbjct: 95289 gtgccggtgccgccgcagttgcagc 95313
>dbj|AP000871.7| Homo sapiens genomic DNA, chromosome 11 clone:RP11-709J7, complete sequence Length = 199118 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 145 gcagctgcagctgcagggcccgcgg 169 ||||||||||| ||||||||||||| Sbjct: 90287 gcagctgcagcagcagggcccgcgg 90311
>dbj|AP005718.3| Homo sapiens genomic DNA, chromosome 11 clone:RP11-415G10, complete sequence Length = 186104 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 145 gcagctgcagctgcagggcccgcgg 169 ||||||||||| ||||||||||||| Sbjct: 174439 gcagctgcagcagcagggcccgcgg 174463
>dbj|AP001770.4| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-27I22, complete sequence Length = 73589 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 145 gcagctgcagctgcagggcccgcgg 169 ||||||||||| ||||||||||||| Sbjct: 61642 gcagctgcagcagcagggcccgcgg 61666
>emb|AL772271.11| Mouse DNA sequence from clone RP23-17P12 on chromosome 2, complete sequence Length = 204136 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 105 cgccgtcggaggaggaggagc 125 ||||||||||||||||||||| Sbjct: 127964 cgccgtcggaggaggaggagc 127944
>ref|NM_125378.2| Arabidopsis thaliana structural constituent of ribosome AT5G59850 mRNA, complete cds Length = 796 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 14 cgctcgtcttcttccttcca 33 |||||||||||||||||||| Sbjct: 374 cgctcgtcttcttccttcca 393
>gb|AC102907.11| Mus musculus chromosome 1, clone RP24-291E1, complete sequence Length = 185121 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 cttcttccttccatccccat 40 |||||||||||||||||||| Sbjct: 175005 cttcttccttccatccccat 174986
>ref|NM_188529.1| Oryza sativa (japonica cultivar-group), Ozsa8198 predicted mRNA Length = 2349 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 101 gcgccgccgtcggaggaggaggag 124 ||||||||||| |||||||||||| Sbjct: 395 gcgccgccgtccgaggaggaggag 372
>ref|XM_514485.1| PREDICTED: Pan troglodytes similar to a disintegrin and metalloprotease domain 33 (LOC458061), mRNA Length = 3789 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 512 ccgctgccgccgggccccgcgccg 535 ||||||||||||||||| |||||| Sbjct: 3378 ccgctgccgccgggccctgcgccg 3401
>ref|XM_480346.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1974 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 102 cgccgccgtcggaggaggaggagc 125 |||||||| ||||||||||||||| Sbjct: 1217 cgccgccgccggaggaggaggagc 1240
>ref|NM_145762.1| Homo sapiens GDNF family receptor alpha 4 (GFRA4), transcript variant 2, mRNA Length = 1517 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 512 ccgctgccgccgggccccgcgccg 535 ||||||||||||||||| |||||| Sbjct: 186 ccgctgccgccgggccctgcgccg 209
>ref|NM_022139.2| Homo sapiens GDNF family receptor alpha 4 (GFRA4), transcript variant 1, mRNA Length = 1427 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 512 ccgctgccgccgggccccgcgccg 535 ||||||||||||||||| |||||| Sbjct: 186 ccgctgccgccgggccctgcgccg 209
>ref|NM_185230.2| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 690 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 102 cgccgccgtcggaggaggag 121 |||||||||||||||||||| Sbjct: 221 cgccgccgtcggaggaggag 240
>gb|AC138197.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0055D24 map C535, complete sequence Length = 174759 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 101 gcgccgccgtcggaggaggaggagcggc 128 |||||||||||||||| || |||||||| Sbjct: 51671 gcgccgccgtcggaggcggcggagcggc 51698
>gb|AC134926.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0056I10, complete sequence Length = 158833 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 cgccgtcggaggaggaggag 124 |||||||||||||||||||| Sbjct: 138805 cgccgtcggaggaggaggag 138824
>ref|XM_423069.1| PREDICTED: Gallus gallus similar to phosphatidylinositol 4-kinase type II (LOC425291), mRNA Length = 1420 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 511 gccgctgccgccgggccccgcgcc 534 ||||| |||||||||||||||||| Sbjct: 210 gccgccgccgccgggccccgcgcc 187
>gb|BC029014.1| Mus musculus thromboxane A synthase 1, platelet, mRNA (cDNA clone MGC:32210 IMAGE:5007629), complete cds Length = 2079 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 280 ccaccagcaggcccagccgc 299 |||||||||||||||||||| Sbjct: 1634 ccaccagcaggcccagccgc 1615
>gb|AC137113.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0006N14, complete sequence Length = 155730 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 105 cgccgtcggaggaggaggag 124 |||||||||||||||||||| Sbjct: 118422 cgccgtcggaggaggaggag 118403
>ref|NM_011539.3| Mus musculus thromboxane A synthase 1, platelet (Tbxas1), mRNA Length = 1992 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 280 ccaccagcaggcccagccgc 299 |||||||||||||||||||| Sbjct: 1632 ccaccagcaggcccagccgc 1613
>ref|NM_001039179.1| Mus musculus bicaudal D homolog 2 (Drosophila) (Bicd2), transcript variant 1, mRNA Length = 6351 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 cgccgtcggaggaggaggag 124 |||||||||||||||||||| Sbjct: 130 cgccgtcggaggaggaggag 149
>ref|NM_029791.3| Mus musculus bicaudal D homolog 2 (Drosophila) (Bicd2), transcript variant 2, mRNA Length = 4634 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 cgccgtcggaggaggaggag 124 |||||||||||||||||||| Sbjct: 130 cgccgtcggaggaggaggag 149
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 509 cggccgctgccgccgggccccgcg 532 |||||||||||||||||| ||||| Sbjct: 3757950 cggccgctgccgccgggcgccgcg 3757927
>gb|AE007202.1| Sinorhizobium meliloti 1021 plasmid pSymA section 8 of 121 of the complete plasmid sequence Length = 10381 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 465 ctttctcgccggcagcgagg 484 |||||||||||||||||||| Sbjct: 8658 ctttctcgccggcagcgagg 8677
>gb|AC132003.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0091D07, complete sequence Length = 144652 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 105 cgccgtcggaggaggaggag 124 |||||||||||||||||||| Sbjct: 4980 cgccgtcggaggaggaggag 4961
>gb|AY143389.1| Eimeria tenella lactate dehydrogenase (LDH) mRNA, complete cds Length = 1876 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 tcgtcttcttccttccatcc 36 |||||||||||||||||||| Sbjct: 1279 tcgtcttcttccttccatcc 1298
>gb|AY491808.1| Euphydryas aurinia clone EA28 microsatellite sequence Length = 336 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 388 cccgggcgcgccggcccatc 407 |||||||||||||||||||| Sbjct: 334 cccgggcgcgccggcccatc 315
>ref|XM_975837.1| PREDICTED: Mus musculus tetratricopeptide repeat domain 7B (Ttc7b), mRNA Length = 4484 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 512 ccgctgccgccgggccccgcgccg 535 |||| ||||||||||||||||||| Sbjct: 749 ccgccgccgccgggccccgcgccg 726
>ref|XM_127105.7| PREDICTED: Mus musculus tetratricopeptide repeat domain 7B, transcript variant 1 (Ttc7b), mRNA Length = 4400 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 512 ccgctgccgccgggccccgcgccg 535 |||| ||||||||||||||||||| Sbjct: 666 ccgccgccgccgggccccgcgccg 643
>ref|XM_543684.2| PREDICTED: Canis familiaris similar to Myeloid/lymphoid or mixed-lineage leukemia protein 2 (ALL1-related protein) (LOC486558), mRNA Length = 18674 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 392 ggcgcgccggcccatcagtg 411 |||||||||||||||||||| Sbjct: 14395 ggcgcgccggcccatcagtg 14376
>ref|XM_976293.1| PREDICTED: Mus musculus hypothetical protein LOC669641 (LOC669641), mRNA Length = 1370 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 510 ggccgctgccgccgggccccgcgc 533 |||||||||| ||||||||||||| Sbjct: 461 ggccgctgccaccgggccccgcgc 438
>ref|XM_976818.1| PREDICTED: Mus musculus hypothetical protein LOC674754 (LOC674754), mRNA Length = 1370 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 510 ggccgctgccgccgggccccgcgc 533 |||||||||| ||||||||||||| Sbjct: 461 ggccgctgccaccgggccccgcgc 438
>ref|XM_001004902.1| PREDICTED: Mus musculus hypothetical protein LOC668937 (LOC668937), mRNA Length = 1370 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 510 ggccgctgccgccgggccccgcgc 533 |||||||||| ||||||||||||| Sbjct: 461 ggccgctgccaccgggccccgcgc 438
>gb|AC132245.3| Mus musculus BAC clone RP24-420M8 from chromosome 13, complete sequence Length = 148654 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 cgccgtcggaggaggaggag 124 |||||||||||||||||||| Sbjct: 78843 cgccgtcggaggaggaggag 78862
>ref|XM_538669.2| PREDICTED: Canis familiaris similar to CG5020-PA, isoform A (LOC481548), mRNA Length = 4782 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 339 tccacacccagcccggcgag 358 |||||||||||||||||||| Sbjct: 271 tccacacccagcccggcgag 290
>gb|AC125327.4| Mus musculus BAC clone RP23-346B17 from chromosome 6, complete sequence Length = 224846 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 280 ccaccagcaggcccagccgc 299 |||||||||||||||||||| Sbjct: 215513 ccaccagcaggcccagccgc 215494
>gb|AC113114.9| Mus musculus chromosome 17, clone RP23-338H10, complete sequence Length = 183828 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 19 gtcttcttccttccatcccc 38 |||||||||||||||||||| Sbjct: 174892 gtcttcttccttccatcccc 174873
>emb|AL606632.5| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042L16, complete sequence Length = 163738 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 102 cgccgccgtcggaggaggag 121 |||||||||||||||||||| Sbjct: 95003 cgccgccgtcggaggaggag 95022
>ref|XM_541330.2| PREDICTED: Canis familiaris similar to bicaudal D homolog 2 isoform 1 (LOC484214), mRNA Length = 3209 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 cgccgtcggaggaggaggag 124 |||||||||||||||||||| Sbjct: 94 cgccgtcggaggaggaggag 113
>gb|AC144726.6| Medicago truncatula clone mth2-7k13, complete sequence Length = 138586 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 108 cgtcggaggaggaggagcgg 127 |||||||||||||||||||| Sbjct: 100963 cgtcggaggaggaggagcgg 100982
>gb|AC109612.22| Mus musculus strain C57BL/6J clone rp23-37i3 map 17, complete sequence Length = 179382 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 gtcttcttccttccatcccc 38 |||||||||||||||||||| Sbjct: 155568 gtcttcttccttccatcccc 155587
>gb|BC055078.1| Mus musculus cDNA clone IMAGE:30068404, **** WARNING: chimeric clone **** Length = 5065 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 280 ccaccagcaggcccagccgc 299 |||||||||||||||||||| Sbjct: 4698 ccaccagcaggcccagccgc 4679
>emb|AL929554.20| Human DNA sequence from clone RP11-350O14 on chromosome 9 Contains the 3' end of the MAN1B1 gene for mannosidase alpha class 1B member 1, the DPP7 gene for dipeptidylpeptidase 7, the GRIN1 gene for glutamate receptor ionotropic N-methyl D-aspartate 1, a novel gene, the gene for anaphase-promoting complex subunit 2 (ANAPC2), the SSNA1 gene for Sjogren's syndrome nuclear autoantigen 1, three novel genes (FLJ90254), a novel pseudogene, the 5' end of the gene for NADPH-dependent FMN and FAD containing oxidoreductase (NR1) and thirteen CpG islands, complete sequence Length = 119883 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 146 cagctgcagctgcagggccc 165 |||||||||||||||||||| Sbjct: 54113 cagctgcagctgcagggccc 54132
>ref|XM_505211.1| Yarrowia lipolytica CLIB122, YALI0F09515g predicted mRNA Length = 549 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 274 caaccgccaccagcaggccc 293 |||||||||||||||||||| Sbjct: 133 caaccgccaccagcaggccc 152
>emb|AL356755.12| Human DNA sequence from clone RP5-964F7 on chromosome 20 Contains the GFRA4 gene for GDNF family receptor alpha 4, the 3' end of the ADAM33 gene for a disintegrin and metalloproteinase domain 33 protein and two CpG islands, complete sequence Length = 23379 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 512 ccgctgccgccgggccccgcgccg 535 ||||||||||||||||| |||||| Sbjct: 9015 ccgctgccgccgggccctgcgccg 8992
>emb|AL162718.15| Human DNA sequence from clone RP11-274H24 on chromosome 6, complete sequence Length = 178872 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 138 gcagcaggcagctgcagctg 157 |||||||||||||||||||| Sbjct: 58777 gcagcaggcagctgcagctg 58758
>gb|AC134769.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OJ1145F05, from chromosome 3, complete sequence Length = 127348 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 111 cggaggaggaggagcggcag 130 |||||||||||||||||||| Sbjct: 102894 cggaggaggaggagcggcag 102875
>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence Length = 2726152 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 431 tctgccgtgccggtgccgccgcag 454 |||||| ||||||||||||||||| Sbjct: 1002336 tctgccttgccggtgccgccgcag 1002313
>emb|AL136981.22| Human DNA sequence from clone RP11-526D8 on chromosome 9 Contains the 5' end of the gene for coiled-coil protein (BICD2) (KIAA0699), a novel gene, a eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein) (EEF1D) pseudogene, the gene for a novel KRAB box-containing C2H2 type zinc finger protein, a novel gene, a pseudogene similar to part of sorting nexin associated golgi protein 1 (SNAG1), a novel pseudogene, a melanoma antigen pseudogene and three CpG islands, complete sequence Length = 182280 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 105 cgccgtcggaggaggaggag 124 |||||||||||||||||||| Sbjct: 34375 cgccgtcggaggaggaggag 34356
>gb|BT000671.1| Arabidopsis thaliana clone RAFL07-08-L21 (R10754) putative cytoplasmic ribosomal protein S15a (At5g59850) mRNA, complete cds Length = 798 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 14 cgctcgtcttcttccttcca 33 |||||||||||||||||||| Sbjct: 374 cgctcgtcttcttccttcca 393
>gb|AY063028.1| Arabidopsis thaliana putative cytoplasmic ribosomal protein S15a (At5g59850) mRNA, complete cds Length = 424 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 14 cgctcgtcttcttccttcca 33 |||||||||||||||||||| Sbjct: 270 cgctcgtcttcttccttcca 289
>gb|AY035157.1| Arabidopsis thaliana putative cytoplasmic ribosomal protein S15a (At5g59850) mRNA, complete cds Length = 760 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 14 cgctcgtcttcttccttcca 33 |||||||||||||||||||| Sbjct: 369 cgctcgtcttcttccttcca 388
>gb|AC177794.2| Mus musculus chromosome 1, clone wi1-176I16, complete sequence Length = 40705 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 cttcttccttccatccccat 40 |||||||||||||||||||| Sbjct: 2519 cttcttccttccatccccat 2500
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 509 cggccgctgccgccgggccccgcg 532 |||||||||||||||||| ||||| Sbjct: 3498316 cggccgctgccgccgggcgccgcg 3498293
>emb|AL939108.1|SCO939108 Streptomyces coelicolor A3(2) complete genome; segment 5/29 Length = 339650 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 gggcccgcggcccccgcggc 179 |||||||||||||||||||| Sbjct: 145259 gggcccgcggcccccgcggc 145240
>emb|AL939112.1|SCO939112 Streptomyces coelicolor A3(2) complete genome; segment 9/29 Length = 300800 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 365 gcgctcgtccagcgcctcaccggc 388 |||||| ||||||||||||||||| Sbjct: 203212 gcgctcctccagcgcctcaccggc 203235
>dbj|AB207102.1| Acidovorax avenae subsp. avenae Hrp gene cluster, complete cds, strain: N1141 Length = 66987 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 121 ggagcggcagtcgccgcgca 140 |||||||||||||||||||| Sbjct: 46294 ggagcggcagtcgccgcgca 46275
>gb|AC023715.4| Drosophila melanogaster X BAC RP98-17H6 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 160629 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 139 cagcaggcagctgcagctgc 158 |||||||||||||||||||| Sbjct: 86964 cagcaggcagctgcagctgc 86945
>gb|AC112236.3| Homo sapiens BAC clone RP11-308D13 from 4, complete sequence Length = 160615 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 138 gcagcaggcagctgcagctg 157 |||||||||||||||||||| Sbjct: 99718 gcagcaggcagctgcagctg 99699
>gb|AE012127.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 35 of 460 of the complete genome Length = 10675 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 gcaggcagctgcagctgcag 160 |||||||||||||||||||| Sbjct: 8244 gcaggcagctgcagctgcag 8263
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome Length = 4712337 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 516 tgccgccgggccccgcgccgtact 539 |||||||| ||||||||||||||| Sbjct: 3986795 tgccgccgtgccccgcgccgtact 3986772
>gb|AY052562.1| Homo sapiens coiled-coil protein BICD2 mRNA, complete cds Length = 2727 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 cgccgtcggaggaggaggag 124 |||||||||||||||||||| Sbjct: 65 cgccgtcggaggaggaggag 84
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 276 accgccaccagcaggcccag 295 |||||||||||||||||||| Sbjct: 217472 accgccaccagcaggcccag 217491
>gb|M35878.1|HUMIBP3 Homo sapiens growth factor-binding protein-3 precursor (IGFBP3) gene, complete cds Length = 10884 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 385 cggcccgggcgcgccggccc 404 |||||||||||||||||||| Sbjct: 1902 cggcccgggcgcgccggccc 1883
>gb|AC079264.23| Homo sapiens Xp BAC RP11-315B16 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 194851 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 137 cgcagcaggcagctgcagct 156 |||||||||||||||||||| Sbjct: 103658 cgcagcaggcagctgcagct 103677
>dbj|AK139479.1| Mus musculus 10 days neonate cortex cDNA, RIKEN full-length enriched library, clone:A830097I09 product:thromboxane A synthase 1, platelet, full insert sequence Length = 4556 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 280 ccaccagcaggcccagccgc 299 |||||||||||||||||||| Sbjct: 4211 ccaccagcaggcccagccgc 4192
>gb|AC098679.3| Homo sapiens BAC clone RP11-597D13 from 4, complete sequence Length = 188513 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 138 gcagcaggcagctgcagctg 157 |||||||||||||||||||| Sbjct: 131936 gcagcaggcagctgcagctg 131955
>dbj|AK148363.1| Mus musculus B16 F10Y cells cDNA, RIKEN full-length enriched library, clone:G370113O18 product:hypothetical protein, full insert sequence Length = 3348 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 512 ccgctgccgccgggccccgcgccg 535 |||| ||||||||||||||||||| Sbjct: 58 ccgccgccgccgggccccgcgccg 35
>gb|AF317226.1|AF317226 Aeromonas hydrophila superoxide dismutase MnSOD (sodA) gene, complete cds Length = 898 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 280 ccaccagcaggcccagccgc 299 |||||||||||||||||||| Sbjct: 605 ccaccagcaggcccagccgc 586
>dbj|AK156407.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830020K11 product:bicaudal D homolog 2 (Drosophila), full insert sequence Length = 4427 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 cgccgtcggaggaggaggag 124 |||||||||||||||||||| Sbjct: 85 cgccgtcggaggaggaggag 104
>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete genome Length = 3570858 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 325 ctcgcccaaggtcatccaca 344 |||||||||||||||||||| Sbjct: 2443430 ctcgcccaaggtcatccaca 2443449
>dbj|AK046740.1| Mus musculus adult male cortex cDNA, RIKEN full-length enriched library, clone:B530045F04 product:weakly similar to HYPOTHETICAL PROTEIN KIAA1140 (FRAGMENT) [Homo sapiens], full insert sequence Length = 3368 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 512 ccgctgccgccgggccccgcgccg 535 |||| ||||||||||||||||||| Sbjct: 55 ccgccgccgccgggccccgcgccg 32
>gb|AC153818.5| Mus musculus 6 BAC RP23-345F4 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 193079 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 280 ccaccagcaggcccagccgc 299 |||||||||||||||||||| Sbjct: 118815 ccaccagcaggcccagccgc 118834
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 gcaggcagctgcagctgcag 160 |||||||||||||||||||| Sbjct: 384533 gcaggcagctgcagctgcag 384552
>dbj|AK082003.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched library, clone:C130093I23 product:hypothetical protein, full insert sequence Length = 1372 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 510 ggccgctgccgccgggccccgcgc 533 |||||||||| ||||||||||||| Sbjct: 462 ggccgctgccaccgggccccgcgc 439
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 cgccgtcggaggaggaggag 124 |||||||||||||||||||| Sbjct: 18403440 cgccgtcggaggaggaggag 18403459 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 105 cgccgtcggaggaggaggag 124 |||||||||||||||||||| Sbjct: 15262789 cgccgtcggaggaggaggag 15262770 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 101 gcgccgccgtcggaggaggaggagcggc 128 |||||||||||||||| || |||||||| Sbjct: 8966556 gcgccgccgtcggaggcggcggagcggc 8966529
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 102 cgccgccgtcggaggaggaggagc 125 |||||||| ||||||||||||||| Sbjct: 4500158 cgccgccgccggaggaggaggagc 4500135
>emb|BX831302.1|CNS0A0UW Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS77ZB12 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 702 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 14 cgctcgtcttcttccttcca 33 |||||||||||||||||||| Sbjct: 325 cgctcgtcttcttccttcca 344
>emb|BX841639.1|CNS09YLU Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB87ZH12 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 742 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 14 cgctcgtcttcttccttcca 33 |||||||||||||||||||| Sbjct: 339 cgctcgtcttcttccttcca 358
>gb|AF253318.1|AF253318 Homo sapiens GFR receptor alpha 4 protein (GFRA4) mRNA, complete cds Length = 1427 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 512 ccgctgccgccgggccccgcgccg 535 ||||||||||||||||| |||||| Sbjct: 186 ccgctgccgccgggccctgcgccg 209
>gb|AY087576.1| Arabidopsis thaliana clone 36757 mRNA, complete sequence Length = 773 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 14 cgctcgtcttcttccttcca 33 |||||||||||||||||||| Sbjct: 369 cgctcgtcttcttccttcca 388
>dbj|AP001800.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0443E05 Length = 176935 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 101 gcgccgccgtcggaggaggaggag 124 ||||||||||| |||||||||||| Sbjct: 144009 gcgccgccgtccgaggaggaggag 144032
>dbj|AP002835.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0417G05 Length = 147803 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 101 gcgccgccgtcggaggaggaggag 124 ||||||||||| |||||||||||| Sbjct: 73918 gcgccgccgtccgaggaggaggag 73941
>gb|AC073895.22| Homo sapiens 3 BAC RP11-622L21 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 167311 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 139 cagcaggcagctgcagctgc 158 |||||||||||||||||||| Sbjct: 105780 cagcaggcagctgcagctgc 105799
>dbj|AP003878.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1120_C08 Length = 150300 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 102 cgccgccgtcggaggaggaggagc 125 |||||||| ||||||||||||||| Sbjct: 24006 cgccgccgccggaggaggaggagc 23983
>emb|AJ250312.1|RNO250312 Rattus norvegicus mRNA for bicaudal D protein, alternatively spliced short form (BicD2 gene) Length = 4550 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 cgccgtcggaggaggaggag 124 |||||||||||||||||||| Sbjct: 78 cgccgtcggaggaggaggag 97
>dbj|AB015475.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MMN10 Length = 84325 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 14 cgctcgtcttcttccttcca 33 |||||||||||||||||||| Sbjct: 26184 cgctcgtcttcttccttcca 26165
>dbj|AP004619.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0583B06 Length = 134442 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 102 cgccgccgtcggaggaggaggagc 125 |||||||| ||||||||||||||| Sbjct: 66048 cgccgccgccggaggaggaggagc 66025
>dbj|AK109929.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-151-H09, full insert sequence Length = 1407 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 111 cggaggaggaggagcggcag 130 |||||||||||||||||||| Sbjct: 748 cggaggaggaggagcggcag 767
>ref|XM_310912.2| Anopheles gambiae str. PEST ENSANGP00000012793 (ENSANGG00000010304), partial mRNA Length = 6702 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 211 gaagccgccggtcgtgccgctgcc 234 |||||||||||||||||| ||||| Sbjct: 2379 gaagccgccggtcgtgccactgcc 2402
>dbj|AK107399.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-127-D08, full insert sequence Length = 1327 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 102 cgccgccgtcggaggaggaggagc 125 |||||||| ||||||||||||||| Sbjct: 506 cgccgccgccggaggaggaggagc 483
>dbj|AK107268.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-125-H08, full insert sequence Length = 1366 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 102 cgccgccgtcggaggaggag 121 |||||||||||||||||||| Sbjct: 615 cgccgccgtcggaggaggag 634
>dbj|AK107028.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-A09, full insert sequence Length = 1974 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 102 cgccgccgtcggaggaggaggagc 125 |||||||| ||||||||||||||| Sbjct: 1217 cgccgccgccggaggaggaggagc 1240
>dbj|AK073354.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033028A21, full insert sequence Length = 2326 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 cgccgtcggaggaggaggag 124 |||||||||||||||||||| Sbjct: 144 cgccgtcggaggaggaggag 163
>emb|AJ291675.1|HSA291675 Homo sapiens mRNA for putative GDNF family receptor alpha 4, secreted isoform c (GFRA4 gene) Length = 549 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 512 ccgctgccgccgggccccgcgccg 535 ||||||||||||||||| |||||| Sbjct: 186 ccgctgccgccgggccctgcgccg 209
>emb|AJ291674.1|HSA291674 Homo sapiens mRNA for putative GDNF family receptor alpha 4, GPI anchored isoform b (GFRA4 gene) Length = 900 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 512 ccgctgccgccgggccccgcgccg 535 ||||||||||||||||| |||||| Sbjct: 186 ccgctgccgccgggccctgcgccg 209
>emb|AJ291673.1|HSA291673 Homo sapiens mRNA for GDNF family receptor alpha 4, GPI anchored isoform (GFRA4 gene) Length = 810 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 512 ccgctgccgccgggccccgcgccg 535 ||||||||||||||||| |||||| Sbjct: 186 ccgctgccgccgggccctgcgccg 209
>gb|AF041706.1|AF041706 Coprinus sclerotiger 25S large subunit ribosomal RNA gene, partial sequence Length = 198 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 330 ccaaggtcatccacacccag 349 |||||||||||||||||||| Sbjct: 144 ccaaggtcatccacacccag 125
>gb|AF041694.1|AF041694 Coprinus dictyocalyptratus 25S large subunit ribosomal RNA gene, partial sequence Length = 197 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 330 ccaaggtcatccacacccag 349 |||||||||||||||||||| Sbjct: 143 ccaaggtcatccacacccag 124
>gb|BC032198.1| Mus musculus bicaudal D homolog 2 (Drosophila), mRNA (cDNA clone MGC:38246 IMAGE:5324113), complete cds Length = 2729 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 cgccgtcggaggaggaggag 124 |||||||||||||||||||| Sbjct: 87 cgccgtcggaggaggaggag 106
>dbj|AK064625.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-113-E12, full insert sequence Length = 805 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 105 cgccgtcggaggaggaggag 124 |||||||||||||||||||| Sbjct: 155 cgccgtcggaggaggaggag 136
>ref|NM_182791.1| Homo sapiens coiled-coil domain containing 33 (CCDC33), mRNA Length = 2125 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 275 aaccgccaccagcaggccca 294 |||||||||||||||||||| Sbjct: 690 aaccgccaccagcaggccca 709
>gb|AE003432.5| Drosophila melanogaster chromosome X, section 16 of 74 of the complete sequence Length = 319328 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 139 cagcaggcagctgcagctgc 158 |||||||||||||||||||| Sbjct: 16696 cagcaggcagctgcagctgc 16677
>gb|AC123705.12| Mus musculus chromosome 12, clone RP23-355K21, complete sequence Length = 217397 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 512 ccgctgccgccgggccccgcgccg 535 |||| ||||||||||||||||||| Sbjct: 89527 ccgccgccgccgggccccgcgccg 89550
>dbj|AK122348.1| Mus musculus mRNA for mKIAA0699 protein Length = 6318 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 cgccgtcggaggaggaggag 124 |||||||||||||||||||| Sbjct: 103 cgccgtcggaggaggaggag 122
>gb|AF086814.1|AF086814 Ovis aries steroidogenic acute regulatory protein gene, promoter region; and 5'UTR, partial sequence Length = 2433 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 148 gctgcagctgcagggcccgcggcc 171 ||||||||||||||||||| |||| Sbjct: 2347 gctgcagctgcagggcccgaggcc 2370
>gb|DQ071797.1| Physalacria sp. HKAS 32011 28S large subunit ribosomal RNA gene, partial sequence Length = 634 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 330 ccaaggtcatccacacccag 349 |||||||||||||||||||| Sbjct: 561 ccaaggtcatccacacccag 542
>gb|DQ071786.1| Cystolepiota sistrata 28S large subunit ribosomal RNA gene, partial sequence Length = 630 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 330 ccaaggtcatccacacccag 349 |||||||||||||||||||| Sbjct: 561 ccaaggtcatccacacccag 542
>gb|DQ071785.1| Macrolepiota procera 28S large subunit ribosomal RNA gene, partial sequence Length = 634 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 330 ccaaggtcatccacacccag 349 |||||||||||||||||||| Sbjct: 561 ccaaggtcatccacacccag 542
>ref|NM_015250.3| Homo sapiens bicaudal D homolog 2 (Drosophila) (BICD2), transcript variant 2, mRNA Length = 4625 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 cgccgtcggaggaggaggag 124 |||||||||||||||||||| Sbjct: 65 cgccgtcggaggaggaggag 84
>ref|NM_001003800.1| Homo sapiens bicaudal D homolog 2 (Drosophila) (BICD2), transcript variant 1, mRNA Length = 6433 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 cgccgtcggaggaggaggag 124 |||||||||||||||||||| Sbjct: 65 cgccgtcggaggaggaggag 84
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 cgccgtcggaggaggaggag 124 |||||||||||||||||||| Sbjct: 18562841 cgccgtcggaggaggaggag 18562860 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 105 cgccgtcggaggaggaggag 124 |||||||||||||||||||| Sbjct: 15344288 cgccgtcggaggaggaggag 15344269 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 101 gcgccgccgtcggaggaggaggagcggc 128 |||||||||||||||| || |||||||| Sbjct: 9038219 gcgccgccgtcggaggcggcggagcggc 9038192
>ref|NM_198765.2| Rattus norvegicus bicaudal D homolog 2 (Drosophila) (Bicd2), transcript variant 2, mRNA Length = 4586 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 cgccgtcggaggaggaggag 124 |||||||||||||||||||| Sbjct: 78 cgccgtcggaggaggaggag 97
>ref|NM_001033674.1| Rattus norvegicus bicaudal D homolog 2 (Drosophila) (Bicd2), transcript variant 1, mRNA Length = 6341 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 cgccgtcggaggaggaggag 124 |||||||||||||||||||| Sbjct: 98 cgccgtcggaggaggaggag 117
>gb|BC100660.1| Rattus norvegicus bicaudal D homolog 2 (Drosophila), transcript variant 1, mRNA (cDNA clone MGC:124540 IMAGE:7935996), complete cds Length = 6338 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 cgccgtcggaggaggaggag 124 |||||||||||||||||||| Sbjct: 98 cgccgtcggaggaggaggag 117
>gb|BC073970.1| Homo sapiens bicaudal D homolog 2 (Drosophila), transcript variant 1, mRNA (cDNA clone MGC:88049 IMAGE:6169195), complete cds Length = 6478 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 cgccgtcggaggaggaggag 124 |||||||||||||||||||| Sbjct: 80 cgccgtcggaggaggaggag 99
>gb|U41337.1|MMTBXASG12 Mus musculus thromboxane synthase (TBXAS1) gene, exon 12 Length = 183 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 280 ccaccagcaggcccagccgc 299 |||||||||||||||||||| Sbjct: 111 ccaccagcaggcccagccgc 92
>gb|BC025689.1| Homo sapiens coiled-coil domain containing 33, mRNA (cDNA clone MGC:34145 IMAGE:5207361), complete cds Length = 2125 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 275 aaccgccaccagcaggccca 294 |||||||||||||||||||| Sbjct: 690 aaccgccaccagcaggccca 709
>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica Length = 4003362 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 274 caaccgccaccagcaggccc 293 |||||||||||||||||||| Sbjct: 1307738 caaccgccaccagcaggccc 1307757
>gb|L18868.1|MUSTHROSYN Mouse thromboxane synthase mRNA, complete cds Length = 1847 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 280 ccaccagcaggcccagccgc 299 |||||||||||||||||||| Sbjct: 1503 ccaccagcaggcccagccgc 1484
>dbj|AP006674.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT30L06, TM0369c, complete sequence Length = 68065 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 102 cgccgccgtcggaggaggag 121 |||||||||||||||||||| Sbjct: 24437 cgccgccgtcggaggaggag 24456
>dbj|AP004907.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT11D15, TM0065, complete sequence Length = 115046 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 cgccgtcggaggaggaggag 124 |||||||||||||||||||| Sbjct: 68674 cgccgtcggaggaggaggag 68693
>emb|AJ250106.1|MMU250106 Mus musculus mRNA for Bicaudal D protein (BicD2 gene) Length = 2717 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 cgccgtcggaggaggaggag 124 |||||||||||||||||||| Sbjct: 89 cgccgtcggaggaggaggag 108
>emb|AL845429.4| Mouse DNA sequence from clone RP23-290O4 on chromosome 2, complete sequence Length = 97626 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 510 ggccgctgccgccgggccccgcgc 533 |||||||||| ||||||||||||| Sbjct: 53958 ggccgctgccaccgggccccgcgc 53935
>emb|Z32772.1|HSNMDAR1A H.sapiens gene for N-methyl-D-aspartate receptor R1, exon1, exon2 Length = 7282 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 146 cagctgcagctgcagggccc 165 |||||||||||||||||||| Sbjct: 3219 cagctgcagctgcagggccc 3238
>dbj|AP002898.1| Homo sapiens genomic DNA, chromosome 20p, clone:13N6, complete sequence Length = 206647 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 512 ccgctgccgccgggccccgcgccg 535 ||||||||||||||||| |||||| Sbjct: 138504 ccgctgccgccgggccctgcgccg 138481 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,910,113 Number of Sequences: 3902068 Number of extensions: 4910113 Number of successful extensions: 129812 Number of sequences better than 10.0: 193 Number of HSP's better than 10.0 without gapping: 202 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 125787 Number of HSP's gapped (non-prelim): 4023 length of query: 563 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 540 effective length of database: 17,143,297,704 effective search space: 9257380760160 effective search space used: 9257380760160 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
