ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart46e07 |
|---|---|
| Clone Library Name | barley_pub |
>NRL4_TOBAC (Q42965) Nitrilase 4 (EC 3.5.5.1)| Length = 349 Score = 152 bits (385), Expect = 5e-37 Identities = 74/111 (66%), Positives = 92/111 (82%) Frame = +2 Query: 236 AAMALPPASVEPVIAEVEMNAGADQGATTVRATVVQASSVFYDTPATLDKAEKLIAEAAG 415 A + P + P+ AEV+M G + TVRATVVQAS++FYDTPATL KAE+L+AEAA Sbjct: 2 ALVPTPAVNEGPLFAEVDM--GDNSSTPTVRATVVQASTIFYDTPATLVKAERLLAEAAS 59 Query: 416 YGSQLVLFPEVFVGGYPHGSTFGLTIGSRSAKGKEDFRKYHAAAIDVPGPE 568 YG+QLV+FPE F+GGYP GSTFG++IG+R+AKGKE+FRKYHA+AIDVPGPE Sbjct: 60 YGAQLVVFPEAFIGGYPRGSTFGVSIGNRTAKGKEEFRKYHASAIDVPGPE 110
>NRL4_ARATH (P46011) Nitrilase 4 (EC 3.5.5.1)| Length = 355 Score = 147 bits (372), Expect = 2e-35 Identities = 72/108 (66%), Positives = 89/108 (82%) Frame = +2 Query: 245 ALPPASVEPVIAEVEMNAGADQGATTVRATVVQASSVFYDTPATLDKAEKLIAEAAGYGS 424 A P + + E++M+AG ++ VRATVVQAS+VFYDTPATLDKAE+L++EAA GS Sbjct: 12 AAPQTNGHQIFPEIDMSAG--DSSSIVRATVVQASTVFYDTPATLDKAERLLSEAAENGS 69 Query: 425 QLVLFPEVFVGGYPHGSTFGLTIGSRSAKGKEDFRKYHAAAIDVPGPE 568 QLV+FPE F+GGYP GSTF L IGSR+AKG++DFRKYHA+AIDVPGPE Sbjct: 70 QLVVFPEAFIGGYPRGSTFELAIGSRTAKGRDDFRKYHASAIDVPGPE 117
>NRL1_ARATH (P32961) Nitrilase 1 (EC 3.5.5.1)| Length = 346 Score = 119 bits (298), Expect = 6e-27 Identities = 54/85 (63%), Positives = 70/85 (82%) Frame = +2 Query: 314 ATTVRATVVQASSVFYDTPATLDKAEKLIAEAAGYGSQLVLFPEVFVGGYPHGSTFGLTI 493 +TTVR T+VQ+S+V+ DTPAT+DKAEK I EAA G++LVLFPE F+GGYP G FGL + Sbjct: 22 STTVRVTIVQSSTVYNDTPATIDKAEKYIVEAASKGAELVLFPEGFIGGYPRGFRFGLAV 81 Query: 494 GSRSAKGKEDFRKYHAAAIDVPGPE 568 G + +G+++FRKYHA+AI VPGPE Sbjct: 82 GVHNEEGRDEFRKYHASAIHVPGPE 106
>NRL2_ARATH (P32962) Nitrilase 2 (EC 3.5.5.1)| Length = 339 Score = 117 bits (294), Expect = 2e-26 Identities = 54/85 (63%), Positives = 69/85 (81%) Frame = +2 Query: 314 ATTVRATVVQASSVFYDTPATLDKAEKLIAEAAGYGSQLVLFPEVFVGGYPHGSTFGLTI 493 +T VRAT+VQAS+V+ DTPATL+KA K I EAA GS+LV+FPE F+GGYP G FGL + Sbjct: 15 STIVRATIVQASTVYNDTPATLEKANKFIVEAASKGSELVVFPEAFIGGYPRGFRFGLGV 74 Query: 494 GSRSAKGKEDFRKYHAAAIDVPGPE 568 G + +G+++FRKYHA+AI VPGPE Sbjct: 75 GVHNEEGRDEFRKYHASAIKVPGPE 99
>NRL3_ARATH (P46010) Nitrilase 3 (EC 3.5.5.1)| Length = 346 Score = 117 bits (294), Expect = 2e-26 Identities = 53/85 (62%), Positives = 69/85 (81%) Frame = +2 Query: 314 ATTVRATVVQASSVFYDTPATLDKAEKLIAEAAGYGSQLVLFPEVFVGGYPHGSTFGLTI 493 ++TVR T+VQ+S+V+ DTPATLDKAEK I EAA G++LVLFPE F+GGYP G FGL + Sbjct: 22 SSTVRVTIVQSSTVYNDTPATLDKAEKFIVEAASKGAKLVLFPEAFIGGYPRGFRFGLAV 81 Query: 494 GSRSAKGKEDFRKYHAAAIDVPGPE 568 G + +G+++FR YHA+AI VPGPE Sbjct: 82 GVHNEEGRDEFRNYHASAIKVPGPE 106
>NRLB_KLEPO (P10045) Nitrilase, bromoxynil-specific (EC 3.5.5.1)| Length = 349 Score = 58.9 bits (141), Expect = 1e-08 Identities = 34/84 (40%), Positives = 44/84 (52%) Frame = +2 Query: 317 TTVRATVVQASSVFYDTPATLDKAEKLIAEAAGYGSQLVLFPEVFVGGYPHGSTFGLTIG 496 TT +A VQA V+ D AT DK L+A+AA G+QLV FPE+++ GYP G + Sbjct: 3 TTFKAAAVQAEPVWMDAAATADKTVTLVAKAAAAGAQLVAFPELWIPGYP-----GFMLT 57 Query: 497 SRSAKGKEDFRKYHAAAIDVPGPE 568 + KY AI GPE Sbjct: 58 HNQTETLPFIIKYRKQAIAADGPE 81
>NIT1_YEAST (P40447) Putative nitrilase-like protein NIT1| Length = 199 Score = 55.5 bits (132), Expect = 1e-07 Identities = 30/77 (38%), Positives = 43/77 (55%) Frame = +2 Query: 338 VQASSVFYDTPATLDKAEKLIAEAAGYGSQLVLFPEVFVGGYPHGSTFGLTIGSRSAKGK 517 +Q S T TL K E G++LV+ PE +GGYP GS FG+ +G R +G+ Sbjct: 9 LQIGSCPGSTKDTLKKILSYEKEIKESGAKLVVIPEATLGGYPKGSNFGVYLGYRLQEGR 68 Query: 518 EDFRKYHAAAIDVPGPE 568 E++ KY A AI++ E Sbjct: 69 EEYAKYLAEAIEIGNGE 85
>NRL2_RHORH (Q03217) Aliphatic nitrilase (EC 3.5.5.7)| Length = 365 Score = 54.3 bits (129), Expect = 2e-07 Identities = 25/50 (50%), Positives = 33/50 (66%) Frame = +2 Query: 320 TVRATVVQASSVFYDTPATLDKAEKLIAEAAGYGSQLVLFPEVFVGGYPH 469 T + VQA V++D T+DK +IAEAA G +LV FPEVF+ GYP+ Sbjct: 6 TFKVAAVQAQPVWFDAAKTVDKTVSIIAEAARNGCELVAFPEVFIPGYPY 55
>NRL_BACSX (P82605) Nitrilase (EC 3.5.5.1)| Length = 338 Score = 50.8 bits (120), Expect = 3e-06 Identities = 23/47 (48%), Positives = 31/47 (65%) Frame = +2 Query: 326 RATVVQASSVFYDTPATLDKAEKLIAEAAGYGSQLVLFPEVFVGGYP 466 R VQAS V D AT+DK +L+ EAA G++++ FPE F+ GYP Sbjct: 7 RVAAVQASPVLLDLDATIDKTCRLVDEAAANGAKVIAFPEAFIPGYP 53
>NRL1_RHORH (Q02068) Aliphatic nitrilase (EC 3.5.5.7)| Length = 383 Score = 49.7 bits (117), Expect = 6e-06 Identities = 24/54 (44%), Positives = 33/54 (61%) Frame = +2 Query: 323 VRATVVQASSVFYDTPATLDKAEKLIAEAAGYGSQLVLFPEVFVGGYPHGSTFG 484 V+ VQA V D AT+DKA I EAA G++ + FPEV++ GYP+ + G Sbjct: 13 VKVATVQAEPVILDADATIDKAIGFIEEAAKNGAEFLAFPEVWIPGYPYWAWIG 66
>NRLA_ALCFA (P20960) Nitrilase, arylacetone-specific (EC 3.5.5.1)| (Arylacetonitrilase) Length = 356 Score = 40.0 bits (92), Expect = 0.005 Identities = 27/82 (32%), Positives = 43/82 (52%) Frame = +2 Query: 323 VRATVVQASSVFYDTPATLDKAEKLIAEAAGYGSQLVLFPEVFVGGYPHGSTFGLTIGSR 502 VRA VQA+S YD +DK +L +A G L++F E ++ GYP F + +G+ Sbjct: 7 VRAAAVQAASPNYDLATGVDKTIELARQARDEGCDLIVFGETWLPGYP----FHVWLGAP 62 Query: 503 SAKGKEDFRKYHAAAIDVPGPE 568 + K R Y+A ++ + E Sbjct: 63 AWSLKYSAR-YYANSLSLDSAE 83
>NADE2_THEMA (Q9X0Y0) Probable glutamine-dependent NAD(+) synthetase (EC| 6.3.5.1) (NAD(+) synthase [glutamine-hydrolyzing]) Length = 576 Score = 37.0 bits (84), Expect = 0.039 Identities = 18/48 (37%), Positives = 27/48 (56%) Frame = +2 Query: 323 VRATVVQASSVFYDTPATLDKAEKLIAEAAGYGSQLVLFPEVFVGGYP 466 +R T+ Q + D L KA + + A GS L++FPE+F+ GYP Sbjct: 4 LRVTLAQLNPTLGDFEGNLKKAIEALRVAEDRGSDLLVFPELFLPGYP 51
>CYHY_GLOSO (P32964) Cyanide hydratase (EC 4.2.1.66) (Formamide hydrolyase)| Length = 368 Score = 35.0 bits (79), Expect = 0.15 Identities = 17/48 (35%), Positives = 28/48 (58%) Frame = +2 Query: 326 RATVVQASSVFYDTPATLDKAEKLIAEAAGYGSQLVLFPEVFVGGYPH 469 +A VV + V+ + + K + I EA G +L+ FPEV++ GYP+ Sbjct: 7 KAAVVTSEPVWENLEGGVVKTIEFINEAGKAGCKLIAFPEVWIPGYPY 54
>CYHY_GIBBA (P32963) Cyanide hydratase (EC 4.2.1.66) (Formamide hydrolyase)| Length = 357 Score = 34.3 bits (77), Expect = 0.26 Identities = 17/51 (33%), Positives = 26/51 (50%) Frame = +2 Query: 317 TTVRATVVQASSVFYDTPATLDKAEKLIAEAAGYGSQLVLFPEVFVGGYPH 469 T +A V + ++D + K I EA G + V FPEV++ GYP+ Sbjct: 4 TKYKAAAVTSEPGWFDLEGGVRKTIDFINEAGEAGCKFVAFPEVWIPGYPY 54
>TTP_BOVIN (P53781) Tristetraproline (TTP) (Zinc finger protein 36 homolog)| (Zfp-36) (TIS11A protein) (TIS11) Length = 324 Score = 32.7 bits (73), Expect = 0.74 Identities = 20/59 (33%), Positives = 22/59 (37%) Frame = +3 Query: 192 HLLS*SARFLALPARRRWLCPPXXXXXXXXXXXXTPAPIRVPPPCGQLLCRPPACSTTP 368 H+L S F LP+ RR PP PPP G LL P A S P Sbjct: 177 HVLRQSISFSGLPSGRRTSPPPASLAGPSVSSWSFSPSSSPPPPPGDLLLSPSAFSAAP 235
>MTR1L_HUMAN (Q13585) Melatonin-related receptor (G protein-coupled receptor 50)| (H9) Length = 613 Score = 32.3 bits (72), Expect = 0.97 Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 2/59 (3%) Frame = +2 Query: 101 EPQRARTLARDQFVRDYLRRKHDK*HAPPTA--SPLLVRSIPRPSCSAAMALPPASVEP 271 E Q ARTLAR + R+ D+ HA P +P+ VR++P P +AA AS P Sbjct: 328 EMQEARTLARARAHARDQAREQDRAHACPAVEETPMNVRNVPLPGDAAAGHPDRASGHP 386
>PULA_KLEPN (P07206) Pullulanase precursor (EC 3.2.1.41) (Alpha-dextrin| endo-1,6-alpha-glucosidase) (Pullulan 6-glucanohydrolase) Length = 1090 Score = 32.0 bits (71), Expect = 1.3 Identities = 27/84 (32%), Positives = 37/84 (44%), Gaps = 1/84 (1%) Frame = +2 Query: 182 PPTASPLLVRSIPRPSCSAAMALPP-ASVEPVIAEVEMNAGADQGATTVRATVVQASSVF 358 P T S + P S AA LP A+V+ ++ + A + + AT VQ + V Sbjct: 232 PTTVSQQVSMRFPHLSSYAAFKLPDNANVDELLQGETVAIAAAEDGILISATQVQTAGV- 290 Query: 359 YDTPATLDKAEKLIAEAAGYGSQL 430 LD A AEA YG+QL Sbjct: 291 ------LDDAYAEAAEALSYGAQL 308
>CUD1_SCHGR (Q7M4F4) Endocuticle structural glycoprotein SgAbd-1| Length = 184 Score = 32.0 bits (71), Expect = 1.3 Identities = 24/64 (37%), Positives = 30/64 (46%), Gaps = 8/64 (12%) Frame = +2 Query: 185 PTASPLLVRSIPRPSCSAAMALPPAS--------VEPVIAEVEMNAGADQGATTVRATVV 340 P +P+ VR IPRPS + PPAS PV+ + A A Q A T+ Sbjct: 9 PKYNPIDVR-IPRPSATPVRPSPPASRAPPPPPPPRPVVPSQPLPAPAPQPAIVPARTIP 67 Query: 341 QASS 352 QASS Sbjct: 68 QASS 71
>RC3H1_XENLA (Q6NUC6) Roquin (RING finger and C3H zinc finger protein 1)| Length = 1114 Score = 31.2 bits (69), Expect = 2.2 Identities = 19/59 (32%), Positives = 30/59 (50%) Frame = +2 Query: 107 QRARTLARDQFVRDYLRRKHDK*HAPPTASPLLVRSIPRPSCSAAMALPPASVEPVIAE 283 Q+ + + Q+ Y R+ +APP LVR+ P P + +PPA+V P +AE Sbjct: 658 QQYQAIVPTQYQPHYDNRRAYPSNAPPYQREELVRASPVP-----LEMPPAAVSPYVAE 711
>MYO15_HUMAN (Q9UKN7) Myosin-15 (Myosin XV) (Unconventional myosin-15)| Length = 3530 Score = 29.6 bits (65), Expect = 6.3 Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 1/58 (1%) Frame = +2 Query: 185 PTASPLLVRSIPRPSCSAAMA-LPPASVEPVIAEVEMNAGADQGATTVRATVVQASSV 355 P A P+L+R+ P+P A +A P ++PV A V A T+ +V+ S++ Sbjct: 2507 PPAKPVLLRATPKPLAPAPLAKAPRLPIKPVAAPVLAQDQASPETTSPSPELVRYSTL 2564
>AROB_LACSS (Q38X86) 3-dehydroquinate synthase (EC 4.2.3.4)| Length = 355 Score = 29.6 bits (65), Expect = 6.3 Identities = 21/62 (33%), Positives = 31/62 (50%) Frame = +2 Query: 371 ATLDKAEKLIAEAAGYGSQLVLFPEVFVGGYPHGSTFGLTIGSRSAKGKEDFRKYHAAAI 550 A LDKA +LIA + Y +Q+V+ +V G FG TIG + + D H A+ Sbjct: 209 AILDKAPELIARSIAYKAQIVM-ADVQESGQRRLLNFGHTIG-HAVESLADGELTHGEAV 266 Query: 551 DV 556 + Sbjct: 267 SI 268
>ATS20_MOUSE (P59511) ADAMTS-20 precursor (EC 3.4.24.-) (A disintegrin and| metalloproteinase with thrombospondin motifs 20) (ADAM-TS 20) (ADAM-TS20) Length = 1906 Score = 24.6 bits (52), Expect(2) = 7.1 Identities = 13/40 (32%), Positives = 19/40 (47%), Gaps = 6/40 (15%) Frame = -3 Query: 385 FIERCRGV-VEHAGGLHNSC-----PHGGGTLIGAGVHLH 284 +++ CR + A G+H C P GT G G+H H Sbjct: 499 YLKHCRRLWCTSAEGVHKGCRTQHMPLADGTSCGPGMHCH 538 Score = 23.1 bits (48), Expect(2) = 7.1 Identities = 8/18 (44%), Positives = 11/18 (61%) Frame = -2 Query: 203 GEEMPWGARATCRASCVG 150 GE PWG ++C +C G Sbjct: 554 GEWGPWGPYSSCSRTCGG 571
>TTP_RAT (P47973) Tristetraproline (TTP) (Zinc finger protein 36) (Zfp-36)| (TIS11A protein) (TIS11) Length = 320 Score = 29.3 bits (64), Expect = 8.2 Identities = 20/59 (33%), Positives = 24/59 (40%) Frame = +3 Query: 192 HLLS*SARFLALPARRRWLCPPXXXXXXXXXXXXTPAPIRVPPPCGQLLCRPPACSTTP 368 H+L S F LP+ RR PP + +P PPP G L P A S P Sbjct: 172 HVLRQSISFSGLPSGRR-TSPPPPGFSGPSLSSCSFSPSSSPPPPGDLPLSPSAFSAAP 229
>TTP_SHEEP (Q6S9E0) Tristetraproline (TTP) (Zinc finger protein 36 homolog)| (Zfp-36) Length = 325 Score = 29.3 bits (64), Expect = 8.2 Identities = 19/59 (32%), Positives = 21/59 (35%) Frame = +3 Query: 192 HLLS*SARFLALPARRRWLCPPXXXXXXXXXXXXTPAPIRVPPPCGQLLCRPPACSTTP 368 H+L S F LP+ RR PP PPP G L P A S P Sbjct: 177 HVLRQSISFSGLPSGRRTSPPPASLAGPSVPSWSFSPSSSPPPPPGDLPLSPSAFSAAP 235
>PDLI7_RAT (Q9Z1Z9) PDZ and LIM domain protein 7 (LIM mineralization protein)| (LMP) (Protein enigma) Length = 457 Score = 29.3 bits (64), Expect = 8.2 Identities = 23/82 (28%), Positives = 35/82 (42%) Frame = +2 Query: 179 APPTASPLLVRSIPRPSCSAAMALPPASVEPVIAEVEMNAGADQGATTVRATVVQASSVF 358 AP AS + S P P+ + + PP +V+P AE D+ +T + A Sbjct: 198 APAPASTIPQESWPGPTTPSPTSRPPWAVDPAFAE---RYAPDKTSTVLTRHSQPA---- 250 Query: 359 YDTPATLDKAEKLIAEAAGYGS 424 TP L ++ AAG G+ Sbjct: 251 --TPTPLQNRTSIVQAAAGGGT 270
>PDLI7_MOUSE (Q3TJD7) PDZ and LIM domain protein 7 (LIM mineralization protein)| (LMP) (Protein enigma) Length = 457 Score = 29.3 bits (64), Expect = 8.2 Identities = 23/82 (28%), Positives = 35/82 (42%) Frame = +2 Query: 179 APPTASPLLVRSIPRPSCSAAMALPPASVEPVIAEVEMNAGADQGATTVRATVVQASSVF 358 AP AS + S P P+ + + PP +V+P AE D+ +T + A Sbjct: 198 APAPASTIPQESWPGPTTPSPTSRPPWAVDPAFAE---RYAPDKTSTVLTRHSQPA---- 250 Query: 359 YDTPATLDKAEKLIAEAAGYGS 424 TP L ++ AAG G+ Sbjct: 251 --TPTPLQNRTSIVQAAAGGGT 270
>TAL_ANAVT (P51778) Transaldolase (EC 2.2.1.2)| Length = 332 Score = 29.3 bits (64), Expect = 8.2 Identities = 16/28 (57%), Positives = 20/28 (71%), Gaps = 2/28 (7%) Frame = +2 Query: 359 YDTPATLDKAEKLIAE--AAGYGSQLVL 436 YDT AT+ KA +LIA+ AAG G + VL Sbjct: 107 YDTEATITKARELIAQYKAAGIGPERVL 134
>TAL_ANASP (P58561) Transaldolase (EC 2.2.1.2)| Length = 332 Score = 29.3 bits (64), Expect = 8.2 Identities = 16/28 (57%), Positives = 20/28 (71%), Gaps = 2/28 (7%) Frame = +2 Query: 359 YDTPATLDKAEKLIAE--AAGYGSQLVL 436 YDT AT+ KA +LIA+ AAG G + VL Sbjct: 107 YDTEATITKARELIAQYKAAGIGPERVL 134
>FHAB_BORPE (P12255) Filamentous hemagglutinin| Length = 3590 Score = 29.3 bits (64), Expect = 8.2 Identities = 15/36 (41%), Positives = 18/36 (50%) Frame = +2 Query: 179 APPTASPLLVRSIPRPSCSAAMALPPASVEPVIAEV 286 +PP S V +PRP A LPP PV A+V Sbjct: 3310 SPPPVSVATVEVVPRPKVETAQPLPP---RPVAAQV 3342 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 80,462,511 Number of Sequences: 219361 Number of extensions: 1688043 Number of successful extensions: 6425 Number of sequences better than 10.0: 29 Number of HSP's better than 10.0 without gapping: 5958 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6416 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4757699440 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
