ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart46e01 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_470102.1| Oryza sativa (japonica cultivar-group), mRNA Length = 807 Score = 301 bits (152), Expect = 1e-78 Identities = 212/232 (91%) Strand = Plus / Plus Query: 154 gatggacgcggtgccggcgctggcggtggtggacgcgcgcttctgcgcgggggacgaggc 213 |||||| |||||||||||||||||||||||||||||||| ||| ||||||||||| ||| Sbjct: 6 gatggaggcggtgccggcgctggcggtggtggacgcgcggttcgtcgcgggggacgcggc 65 Query: 214 ggcgctggccgtgaccaagacgctcagcatgtccggcaacgacttcaccgtcacggacgc 273 ||||||| ||||| | |||||||| ||| ||||||| | |||||||||||||| ||||| Sbjct: 66 ggcgctgtccgtggcgaagacgctgagcctgtccgggagtgacttcaccgtcaccgacgc 125 Query: 274 cgccacgggcgccctgctgctgcgcgtcgatggcgtcctcttcagcctccgccgccgctg 333 ||||||||||||| | ||||||||||||| ||||| ||||||||||||||||||||||| Sbjct: 126 cgccacgggcgccgtcgtgctgcgcgtcgacggcgtgctcttcagcctccgccgccgctg 185 Query: 334 cctcctcgccgacgcccaccgccgccccgtcctcaccgtccaagaatcggtg 385 |||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 186 cctcctcgccgacgccgaccgccgccccgtcctcaccgtccaagaatcggtg 237
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 301 bits (152), Expect = 1e-78 Identities = 212/232 (91%) Strand = Plus / Minus Query: 154 gatggacgcggtgccggcgctggcggtggtggacgcgcgcttctgcgcgggggacgaggc 213 |||||| |||||||||||||||||||||||||||||||| ||| ||||||||||| ||| Sbjct: 33942191 gatggaggcggtgccggcgctggcggtggtggacgcgcggttcgtcgcgggggacgcggc 33942132 Query: 214 ggcgctggccgtgaccaagacgctcagcatgtccggcaacgacttcaccgtcacggacgc 273 ||||||| ||||| | |||||||| ||| ||||||| | |||||||||||||| ||||| Sbjct: 33942131 ggcgctgtccgtggcgaagacgctgagcctgtccgggagtgacttcaccgtcaccgacgc 33942072 Query: 274 cgccacgggcgccctgctgctgcgcgtcgatggcgtcctcttcagcctccgccgccgctg 333 ||||||||||||| | ||||||||||||| ||||| ||||||||||||||||||||||| Sbjct: 33942071 cgccacgggcgccgtcgtgctgcgcgtcgacggcgtgctcttcagcctccgccgccgctg 33942012 Query: 334 cctcctcgccgacgcccaccgccgccccgtcctcaccgtccaagaatcggtg 385 |||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 33942011 cctcctcgccgacgccgaccgccgccccgtcctcaccgtccaagaatcggtg 33941960 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 340 cgccgacgcccaccgccgccccgtcctc 367 |||| ||| ||||||||||||||||||| Sbjct: 17373182 cgcccacggccaccgccgccccgtcctc 17373155
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 301 bits (152), Expect = 1e-78 Identities = 212/232 (91%) Strand = Plus / Minus Query: 154 gatggacgcggtgccggcgctggcggtggtggacgcgcgcttctgcgcgggggacgaggc 213 |||||| |||||||||||||||||||||||||||||||| ||| ||||||||||| ||| Sbjct: 34032663 gatggaggcggtgccggcgctggcggtggtggacgcgcggttcgtcgcgggggacgcggc 34032604 Query: 214 ggcgctggccgtgaccaagacgctcagcatgtccggcaacgacttcaccgtcacggacgc 273 ||||||| ||||| | |||||||| ||| ||||||| | |||||||||||||| ||||| Sbjct: 34032603 ggcgctgtccgtggcgaagacgctgagcctgtccgggagtgacttcaccgtcaccgacgc 34032544 Query: 274 cgccacgggcgccctgctgctgcgcgtcgatggcgtcctcttcagcctccgccgccgctg 333 ||||||||||||| | ||||||||||||| ||||| ||||||||||||||||||||||| Sbjct: 34032543 cgccacgggcgccgtcgtgctgcgcgtcgacggcgtgctcttcagcctccgccgccgctg 34032484 Query: 334 cctcctcgccgacgcccaccgccgccccgtcctcaccgtccaagaatcggtg 385 |||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 34032483 cctcctcgccgacgccgaccgccgccccgtcctcaccgtccaagaatcggtg 34032432 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 340 cgccgacgcccaccgccgccccgtcctc 367 |||| ||| ||||||||||||||||||| Sbjct: 17366723 cgcccacggccaccgccgccccgtcctc 17366696
>gb|AC133007.4| Oryza sativa chromosome 3 BAC OSJNBa0094J08 genomic sequence, complete sequence Length = 172337 Score = 301 bits (152), Expect = 1e-78 Identities = 212/232 (91%) Strand = Plus / Plus Query: 154 gatggacgcggtgccggcgctggcggtggtggacgcgcgcttctgcgcgggggacgaggc 213 |||||| |||||||||||||||||||||||||||||||| ||| ||||||||||| ||| Sbjct: 115500 gatggaggcggtgccggcgctggcggtggtggacgcgcggttcgtcgcgggggacgcggc 115559 Query: 214 ggcgctggccgtgaccaagacgctcagcatgtccggcaacgacttcaccgtcacggacgc 273 ||||||| ||||| | |||||||| ||| ||||||| | |||||||||||||| ||||| Sbjct: 115560 ggcgctgtccgtggcgaagacgctgagcctgtccgggagtgacttcaccgtcaccgacgc 115619 Query: 274 cgccacgggcgccctgctgctgcgcgtcgatggcgtcctcttcagcctccgccgccgctg 333 ||||||||||||| | ||||||||||||| ||||| ||||||||||||||||||||||| Sbjct: 115620 cgccacgggcgccgtcgtgctgcgcgtcgacggcgtgctcttcagcctccgccgccgctg 115679 Query: 334 cctcctcgccgacgcccaccgccgccccgtcctcaccgtccaagaatcggtg 385 |||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 115680 cctcctcgccgacgccgaccgccgccccgtcctcaccgtccaagaatcggtg 115731
>dbj|AK071618.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023104J18, full insert sequence Length = 916 Score = 297 bits (150), Expect = 2e-77 Identities = 210/230 (91%) Strand = Plus / Plus Query: 154 gatggacgcggtgccggcgctggcggtggtggacgcgcgcttctgcgcgggggacgaggc 213 |||||| |||||||||||||||||||||||||||||||| ||| ||||||||||| ||| Sbjct: 137 gatggaggcggtgccggcgctggcggtggtggacgcgcggttcgtcgcgggggacgcggc 196 Query: 214 ggcgctggccgtgaccaagacgctcagcatgtccggcaacgacttcaccgtcacggacgc 273 ||||||| ||||| | |||||||| ||| ||||||| | |||||||||||||| ||||| Sbjct: 197 ggcgctgtccgtggcgaagacgctgagcctgtccgggagtgacttcaccgtcaccgacgc 256 Query: 274 cgccacgggcgccctgctgctgcgcgtcgatggcgtcctcttcagcctccgccgccgctg 333 ||||||||||||| | ||||||||||||| ||||| ||||||||||||||||||||||| Sbjct: 257 cgccacgggcgccgtcgtgctgcgcgtcgacggcgtgctcttcagcctccgccgccgctg 316 Query: 334 cctcctcgccgacgcccaccgccgccccgtcctcaccgtccaagaatcgg 383 |||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 317 cctcctcgccgacgccgaccgccgccccgtcctcaccgtccaagaatcgg 366
>ref|XM_479698.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1599 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 318 gcctccgccgccgctgcctcctc 340 ||||||||||||||||||||||| Sbjct: 74 gcctccgccgccgctgcctcctc 52
>ref|NM_001031208.1| Gallus gallus cleavage and polyadenylation specific factor 2, 100kDa (CPSF2), mRNA Length = 3762 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Plus Query: 161 gcggtgccggcgctggcggtggtggacgcgc 191 |||||||||| |||||||||||||| ||||| Sbjct: 23 gcggtgccggtgctggcggtggtgggcgcgc 53
>gb|DQ479921.1| Mus musculus Pdcd4 gene, complete cds Length = 8151 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 315 tcagcctccgccgccgctgcctc 337 ||||||||||||||||||||||| Sbjct: 404 tcagcctccgccgccgctgcctc 382
>gb|AC117612.9| Mus musculus chromosome 19, clone RP23-103G8, complete sequence Length = 186038 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 315 tcagcctccgccgccgctgcctc 337 ||||||||||||||||||||||| Sbjct: 50803 tcagcctccgccgccgctgcctc 50781
>ref|XM_983657.1| PREDICTED: Mus musculus similar to programmed cell death 4 (LOC670861), mRNA Length = 3614 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 315 tcagcctccgccgccgctgcctc 337 ||||||||||||||||||||||| Sbjct: 590 tcagcctccgccgccgctgcctc 568
>ref|XM_386275.1| Gibberella zeae PH-1 chromosome 3 hypothetical protein (FG06099.1) partial mRNA Length = 822 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 301 cgatggcgtcctcttcagcctcc 323 ||||||||||||||||||||||| Sbjct: 280 cgatggcgtcctcttcagcctcc 258
>gb|BC038304.1| Mus musculus programmed cell death 4, mRNA (cDNA clone IMAGE:1510935), with apparent retained intron Length = 844 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 315 tcagcctccgccgccgctgcctc 337 ||||||||||||||||||||||| Sbjct: 131 tcagcctccgccgccgctgcctc 109
>gb|U52111.3| Homo sapiens chromosome X clone Qc-7G6, QLL-F1720, QLL-C1335, Qc-8B7, Qc-11H12, Qc-7F6, QLL-E153, Qc-10E8, Qc-10B7 map q28, complete sequence Length = 247592 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 318 gcctccgccgccgctgcctcctc 340 ||||||||||||||||||||||| Sbjct: 25641 gcctccgccgccgctgcctcctc 25619
>emb|AJ851661.1| Gallus gallus mRNA for hypothetical protein, clone 15m16 Length = 3762 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Plus Query: 161 gcggtgccggcgctggcggtggtggacgcgc 191 |||||||||| |||||||||||||| ||||| Sbjct: 23 gcggtgccggtgctggcggtggtgggcgcgc 53
>dbj|AK172654.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830225F13 product:programmed cell death 4, full insert sequence Length = 2274 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 315 tcagcctccgccgccgctgcctc 337 ||||||||||||||||||||||| Sbjct: 35 tcagcctccgccgccgctgcctc 13
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 318 gcctccgccgccgctgcctcctc 340 ||||||||||||||||||||||| Sbjct: 319720 gcctccgccgccgctgcctcctc 319698
>dbj|AP004462.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0450B04 Length = 153268 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 318 gcctccgccgccgctgcctcctc 340 ||||||||||||||||||||||| Sbjct: 29234 gcctccgccgccgctgcctcctc 29212
>dbj|AP003909.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1300_E01 Length = 103022 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 318 gcctccgccgccgctgcctcctc 340 ||||||||||||||||||||||| Sbjct: 86146 gcctccgccgccgctgcctcctc 86124
>ref|NM_197912.1| Oryza sativa (japonica cultivar-group) putative peptide transporter (OSJNBa0056G17.8), mRNA Length = 1748 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 161 gcggtgccggcgctggcggtgg 182 |||||||||||||||||||||| Sbjct: 1317 gcggtgccggcgctggcggtgg 1338
>gb|AC101716.6| Mus musculus chromosome 7, clone RP23-287I20, complete sequence Length = 182151 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 393 ttcccctcttccccccacttcc 414 |||||||||||||||||||||| Sbjct: 92524 ttcccctcttccccccacttcc 92545
>gb|AC104274.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1171_H02, complete sequence Length = 109969 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Minus Query: 86 gccgctcgatccgatccgccgccgcc 111 |||||||||||| ||||||||||||| Sbjct: 66819 gccgctcgatcctatccgccgccgcc 66794
>ref|NM_015431.2| Homo sapiens tripartite motif-containing 58 (TRIM58), mRNA Length = 2594 Score = 44.1 bits (22), Expect = 0.45 Identities = 28/30 (93%) Strand = Plus / Plus Query: 191 cgcttctgcgcgggggacgaggcggcgctg 220 |||||||||| || |||||||||||||||| Sbjct: 361 cgcttctgcgaggaggacgaggcggcgctg 390
>gb|AC164001.4| Mus musculus chromosome 7, clone RP23-332G12, complete sequence Length = 190345 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 393 ttcccctcttccccccacttcc 414 |||||||||||||||||||||| Sbjct: 116949 ttcccctcttccccccacttcc 116928
>gb|AC099571.3| Homo sapiens chromosome 1 clone RP11-438H8, complete sequence Length = 167231 Score = 44.1 bits (22), Expect = 0.45 Identities = 28/30 (93%) Strand = Plus / Plus Query: 191 cgcttctgcgcgggggacgaggcggcgctg 220 |||||||||| || |||||||||||||||| Sbjct: 73668 cgcttctgcgaggaggacgaggcggcgctg 73697
>gb|AF327057.1| Homo sapiens BIA2 protein mRNA, complete cds Length = 2456 Score = 44.1 bits (22), Expect = 0.45 Identities = 28/30 (93%) Strand = Plus / Plus Query: 191 cgcttctgcgcgggggacgaggcggcgctg 220 |||||||||| || |||||||||||||||| Sbjct: 361 cgcttctgcgaggaggacgaggcggcgctg 390
>dbj|AK096188.1| Homo sapiens cDNA FLJ38869 fis, clone MESAN2013283, weakly similar to 52 KDA RO PROTEIN Length = 2476 Score = 44.1 bits (22), Expect = 0.45 Identities = 28/30 (93%) Strand = Plus / Plus Query: 191 cgcttctgcgcgggggacgaggcggcgctg 220 |||||||||| || |||||||||||||||| Sbjct: 243 cgcttctgcgaggaggacgaggcggcgctg 272
>gb|AC018727.10| Oryza sativa chromosome 10 BAC OSJNBa0056G17 genomic sequence, complete sequence Length = 139999 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 161 gcggtgccggcgctggcggtgg 182 |||||||||||||||||||||| Sbjct: 51455 gcggtgccggcgctggcggtgg 51476
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 161 gcggtgccggcgctggcggtgg 182 |||||||||||||||||||||| Sbjct: 22596786 gcggtgccggcgctggcggtgg 22596807 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 319 cctccgccgccgctgcctcc 338 |||||||||||||||||||| Sbjct: 18735135 cctccgccgccgctgcctcc 18735116 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 205 ggacgaggcggcgctggccg 224 |||||||||||||||||||| Sbjct: 9113355 ggacgaggcggcgctggccg 9113374
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Minus Query: 86 gccgctcgatccgatccgccgccgcc 111 |||||||||||| ||||||||||||| Sbjct: 9084822 gccgctcgatcctatccgccgccgcc 9084797 Score = 42.1 bits (21), Expect = 1.8 Identities = 33/37 (89%) Strand = Plus / Minus Query: 305 ggcgtcctcttcagcctccgccgccgctgcctcctcg 341 ||||||||| || |||||||||||||| |||| |||| Sbjct: 18038444 ggcgtcctcctccgcctccgccgccgccgccttctcg 18038408 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 309 tcctcttcagcctccgccgccgctgcctc 337 ||||| ||| ||||||||||||||||||| Sbjct: 13239740 tcctcctcatcctccgccgccgctgcctc 13239768 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 321 tccgccgccgctgcctcctc 340 |||||||||||||||||||| Sbjct: 29350049 tccgccgccgctgcctcctc 29350030 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 318 gcctccgccgccgctgcctc 337 |||||||||||||||||||| Sbjct: 22956757 gcctccgccgccgctgcctc 22956776 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 322 ccgccgccgctgcctcctcg 341 |||||||||||||||||||| Sbjct: 18939817 ccgccgccgctgcctcctcg 18939836
>dbj|AK105726.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-201-G10, full insert sequence Length = 1942 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 161 gcggtgccggcgctggcggtgg 182 |||||||||||||||||||||| Sbjct: 1374 gcggtgccggcgctggcggtgg 1395
>dbj|AK099267.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023018P15, full insert sequence Length = 1938 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 161 gcggtgccggcgctggcggtgg 182 |||||||||||||||||||||| Sbjct: 1364 gcggtgccggcgctggcggtgg 1385
>dbj|AK099219.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013086I05, full insert sequence Length = 1880 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 161 gcggtgccggcgctggcggtgg 182 |||||||||||||||||||||| Sbjct: 1382 gcggtgccggcgctggcggtgg 1403
>dbj|AK070527.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023060H09, full insert sequence Length = 1950 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 161 gcggtgccggcgctggcggtgg 182 |||||||||||||||||||||| Sbjct: 1382 gcggtgccggcgctggcggtgg 1403
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 161 gcggtgccggcgctggcggtgg 182 |||||||||||||||||||||| Sbjct: 22609254 gcggtgccggcgctggcggtgg 22609275 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 319 cctccgccgccgctgcctcc 338 |||||||||||||||||||| Sbjct: 18745988 cctccgccgccgctgcctcc 18745969 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 205 ggacgaggcggcgctggccg 224 |||||||||||||||||||| Sbjct: 9118494 ggacgaggcggcgctggccg 9118513
>dbj|AB208969.1| Homo sapiens mRNA for KIAA0182 protein variant protein Length = 6599 Score = 44.1 bits (22), Expect = 0.45 Identities = 28/30 (93%) Strand = Plus / Plus Query: 191 cgcttctgcgcgggggacgaggcggcgctg 220 |||||||||| || |||||||||||||||| Sbjct: 355 cgcttctgcgaggaggacgaggcggcgctg 384
>gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome Length = 3730232 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 272 gccgccacgggcgccctgctgctgc 296 |||||||||||||| |||||||||| Sbjct: 2731183 gccgccacgggcgctctgctgctgc 2731207
>ref|XM_474412.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2718 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 320 ctccgccgccgctgcctcctcgccg 344 |||||||||||| |||||||||||| Sbjct: 18 ctccgccgccgccgcctcctcgccg 42
>ref|NM_190948.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2193 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 319 cctccgccgccgctgcctcctcgccgacg 347 ||||||||||| |||||||| |||||||| Sbjct: 1295 cctccgccgcctctgcctccgcgccgacg 1323 Score = 40.1 bits (20), Expect = 7.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 319 cctccgccgccgctgcctcctcgccgacgccc 350 ||||||||||| | |||||| ||||||||||| Sbjct: 1150 cctccgccgcctccgcctccgcgccgacgccc 1181
>ref|XM_477951.1| Oryza sativa (japonica cultivar-group), mRNA Length = 897 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 341 gccgacgcccaccgccgcccc 361 ||||||||||||||||||||| Sbjct: 734 gccgacgcccaccgccgcccc 754
>ref|NM_003107.2| Homo sapiens SRY (sex determining region Y)-box 4 (SOX4), mRNA Length = 4912 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 200 gcgggggacgaggcggcgctg 220 ||||||||||||||||||||| Sbjct: 1843 gcgggggacgaggcggcgctg 1823
>gb|AY016023.1| Sphoeroides nephelus alpha globin gene cluster, complete sequence Length = 167215 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 254 gacttcaccgtcacggacgccgcca 278 |||||||||||||||| |||||||| Sbjct: 85417 gacttcaccgtcacggccgccgcca 85441
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 158 gacgcggtgccggcgctggcg 178 ||||||||||||||||||||| Sbjct: 5689125 gacgcggtgccggcgctggcg 5689145
>gb|AC136218.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0039A21, complete sequence Length = 139074 Score = 42.1 bits (21), Expect = 1.8 Identities = 33/37 (89%) Strand = Plus / Minus Query: 305 ggcgtcctcttcagcctccgccgccgctgcctcctcg 341 ||||||||| || |||||||||||||| |||| |||| Sbjct: 5699 ggcgtcctcctccgcctccgccgccgccgccttctcg 5663
>gb|AC120987.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0007A06, complete sequence Length = 148029 Score = 42.1 bits (21), Expect = 1.8 Identities = 33/37 (89%) Strand = Plus / Minus Query: 305 ggcgtcctcttcagcctccgccgccgctgcctcctcg 341 ||||||||| || |||||||||||||| |||| |||| Sbjct: 73771 ggcgtcctcctccgcctccgccgccgccgccttctcg 73735
>gb|BC072668.1| Homo sapiens SRY (sex determining region Y)-box 4, mRNA (cDNA clone MGC:71240 IMAGE:6584346), complete cds Length = 2107 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 200 gcgggggacgaggcggcgctg 220 ||||||||||||||||||||| Sbjct: 1663 gcgggggacgaggcggcgctg 1643
>gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome Length = 2467205 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 169 ggcgctggcggtggtggacgcgcgcttct 197 |||||||||| |||||| ||||||||||| Sbjct: 829956 ggcgctggcgttggtgggcgcgcgcttct 829984
>gb|AC096707.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OJ1583_A05, complete sequence Length = 126987 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 309 tcctcttcagcctccgccgccgctgcctc 337 ||||| ||| ||||||||||||||||||| Sbjct: 17356 tcctcctcatcctccgccgccgctgcctc 17384
>gb|AC093955.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OJ1240_E09, complete sequence Length = 118742 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 309 tcctcttcagcctccgccgccgctgcctc 337 ||||| ||| ||||||||||||||||||| Sbjct: 73315 tcctcctcatcctccgccgccgctgcctc 73343
>ref|XM_975103.1| PREDICTED: Mus musculus similar to CD69 antigen (p60, early T-cell activation antigen) (LOC665180), mRNA Length = 1538 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 207 acgaggcggcgctggccgtga 227 ||||||||||||||||||||| Sbjct: 659 acgaggcggcgctggccgtga 679
>ref|XM_914774.2| PREDICTED: Mus musculus C-type lectin domain family, member l (Clec2l), mRNA Length = 1616 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 207 acgaggcggcgctggccgtga 227 ||||||||||||||||||||| Sbjct: 737 acgaggcggcgctggccgtga 757
>gb|AC118613.8| Mus musculus chromosome 6, clone RP23-442E2, complete sequence Length = 256556 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 207 acgaggcggcgctggccgtga 227 ||||||||||||||||||||| Sbjct: 69393 acgaggcggcgctggccgtga 69413
>emb|Z98885.1|HS522J7 Human DNA sequence from clone RP3-522J7 on chromosome 22q13.3, complete sequence Length = 84364 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 393 ttcccctcttccccccacttc 413 ||||||||||||||||||||| Sbjct: 79860 ttcccctcttccccccacttc 79840
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence Length = 4895836 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 171 cgctggcggtggtggacgcgc 191 ||||||||||||||||||||| Sbjct: 3360744 cgctggcggtggtggacgcgc 3360724 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 470 ccgcggatggttggtggccgg 490 ||||||||||||||||||||| Sbjct: 3275003 ccgcggatggttggtggccgg 3274983
>emb|AL136179.15| Human DNA sequence from clone RP3-322L4 on chromosome 6 Contains the SOX4 gene for SRY (sex determining region Y)-box 4, a novel pseudogene and CpG islands, complete sequence Length = 128728 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 200 gcgggggacgaggcggcgctg 220 ||||||||||||||||||||| Sbjct: 11281 gcgggggacgaggcggcgctg 11261
>emb|X70683.1|HSSOX4M H.sapiens mRNA for SOX-4 protein Length = 2797 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 200 gcgggggacgaggcggcgctg 220 ||||||||||||||||||||| Sbjct: 1399 gcgggggacgaggcggcgctg 1379
>emb|BX572600.1| Rhodopseudomonas palustris CGA009 complete genome; segment 8/16 Length = 349640 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 353 cgccgccccgtcctcaccgtc 373 ||||||||||||||||||||| Sbjct: 326145 cgccgccccgtcctcaccgtc 326125
>gb|AE011658.1| Xanthomonas axonopodis pv. citri str. 306, section 36 of 469 of the complete genome Length = 10029 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 169 ggcgctggcggtggtggacgcgcgcttct 197 ||||||||||| || |||||||||||||| Sbjct: 1729 ggcgctggcggcggcggacgcgcgcttct 1701
>gb|AE012458.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 366 of 460 of the complete genome Length = 13464 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 159 acgcggtgccggcgctggcgg 179 ||||||||||||||||||||| Sbjct: 8394 acgcggtgccggcgctggcgg 8374
>gb|AF389112.1|AF389112 Rhizobium sp. NGR234, cosmid pXB9, complete sequence Length = 35540 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 274 cgccacgggcgccctgctgctgcgc 298 ||||||||||| ||||||||||||| Sbjct: 20612 cgccacgggcgacctgctgctgcgc 20588
>gb|AC161147.6| Mus musculus BAC clone RP23-357G12 from chromosome 6, complete sequence Length = 225957 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 207 acgaggcggcgctggccgtga 227 ||||||||||||||||||||| Sbjct: 79192 acgaggcggcgctggccgtga 79172
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 159 acgcggtgccggcgctggcgg 179 ||||||||||||||||||||| Sbjct: 920780 acgcggtgccggcgctggcgg 920800 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 96 ccgatccgccgccgccacctgatc 119 |||||||||| ||||||||||||| Sbjct: 586473 ccgatccgcccccgccacctgatc 586450
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 320 ctccgccgccgctgcctcctcgccg 344 |||||||||||| |||||||||||| Sbjct: 34993824 ctccgccgccgccgcctcctcgccg 34993848 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 265 cacggacgccgccacgggcg 284 |||||||||||||||||||| Sbjct: 22386669 cacggacgccgccacgggcg 22386688 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 325 ccgccgctgcctcctcgccg 344 |||||||||||||||||||| Sbjct: 15530845 ccgccgctgcctcctcgccg 15530864
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 320 ctccgccgccgctgcctcctc 340 ||||||||||||||||||||| Sbjct: 20896154 ctccgccgccgctgcctcctc 20896174 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 169 ggcgctggcggtggtggacg 188 |||||||||||||||||||| Sbjct: 20950871 ggcgctggcggtggtggacg 20950852
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 341 gccgacgcccaccgccgcccc 361 ||||||||||||||||||||| Sbjct: 15852165 gccgacgcccaccgccgcccc 15852185
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 319 cctccgccgccgctgcctcctcgccgacg 347 ||||||||||| |||||||| |||||||| Sbjct: 34005182 cctccgccgcctctgcctccgcgccgacg 34005154 Score = 40.1 bits (20), Expect = 7.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 319 cctccgccgccgctgcctcctcgccgacgccc 350 ||||||||||| | |||||| ||||||||||| Sbjct: 34005327 cctccgccgcctccgcctccgcgccgacgccc 34005296 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 325 ccgccgctgcctcctcgccg 344 |||||||||||||||||||| Sbjct: 15974865 ccgccgctgcctcctcgccg 15974884 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 325 ccgccgctgcctcctcgccg 344 |||||||||||||||||||| Sbjct: 15144256 ccgccgctgcctcctcgccg 15144275 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 321 tccgccgccgctgcctcctc 340 |||||||||||||||||||| Sbjct: 14229194 tccgccgccgctgcctcctc 14229175
>dbj|AP003232.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0034E02 Length = 165497 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 319 cctccgccgccgctgcctcctcgccgacg 347 ||||||||||| |||||||| |||||||| Sbjct: 1660 cctccgccgcctctgcctccgcgccgacg 1632 Score = 40.1 bits (20), Expect = 7.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 319 cctccgccgccgctgcctcctcgccgacgccc 350 ||||||||||| | |||||| ||||||||||| Sbjct: 1805 cctccgccgcctccgcctccgcgccgacgccc 1774
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 160 cgcggtgccggcgctggcggtggtg 184 |||||||||||||| |||||||||| Sbjct: 2552596 cgcggtgccggcgccggcggtggtg 2552620 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 205 ggacgaggcggcgctggccg 224 |||||||||||||||||||| Sbjct: 3543016 ggacgaggcggcgctggccg 3543035
>dbj|AP003221.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0003D09 Length = 161970 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 319 cctccgccgccgctgcctcctcgccgacg 347 ||||||||||| |||||||| |||||||| Sbjct: 136625 cctccgccgcctctgcctccgcgccgacg 136597 Score = 40.1 bits (20), Expect = 7.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 319 cctccgccgccgctgcctcctcgccgacgccc 350 ||||||||||| | |||||| ||||||||||| Sbjct: 136770 cctccgccgcctccgcctccgcgccgacgccc 136739
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 494 ctccaggcgctggtgatgaac 514 ||||||||||||||||||||| Sbjct: 2225518 ctccaggcgctggtgatgaac 2225498 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 205 ggacgaggcggcgctggccg 224 |||||||||||||||||||| Sbjct: 2048438 ggacgaggcggcgctggccg 2048457
>dbj|AP006174.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0229B10 Length = 114509 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 320 ctccgccgccgctgcctcctc 340 ||||||||||||||||||||| Sbjct: 88380 ctccgccgccgctgcctcctc 88400
>dbj|AP005641.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0027N13 Length = 179669 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 341 gccgacgcccaccgccgcccc 361 ||||||||||||||||||||| Sbjct: 91679 gccgacgcccaccgccgcccc 91699
>dbj|AK121685.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033070K09, full insert sequence Length = 1847 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 320 ctccgccgccgctgcctcctc 340 ||||||||||||||||||||| Sbjct: 46 ctccgccgccgctgcctcctc 66
>dbj|AK121538.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033031F12, full insert sequence Length = 1947 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 320 ctccgccgccgctgcctcctc 340 ||||||||||||||||||||| Sbjct: 46 ctccgccgccgctgcctcctc 66
>dbj|AK105425.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-124-C06, full insert sequence Length = 1939 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 320 ctccgccgccgctgcctcctc 340 ||||||||||||||||||||| Sbjct: 38 ctccgccgccgctgcctcctc 58
>dbj|AK073218.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033014F21, full insert sequence Length = 2224 Score = 42.1 bits (21), Expect = 1.8 Identities = 33/37 (89%) Strand = Plus / Plus Query: 305 ggcgtcctcttcagcctccgccgccgctgcctcctcg 341 ||||||||| || |||||||||||||| |||| |||| Sbjct: 168 ggcgtcctcctccgcctccgccgccgccgccttctcg 204
>dbj|AK066014.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013049M21, full insert sequence Length = 3416 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 320 ctccgccgccgctgcctcctcgccg 344 |||||||||||| |||||||||||| Sbjct: 76 ctccgccgccgccgcctcctcgccg 100
>emb|AL732343.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0913C04, complete sequence Length = 94152 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 320 ctccgccgccgctgcctcctcgccg 344 |||||||||||| |||||||||||| Sbjct: 26977 ctccgccgccgccgcctcctcgccg 27001
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 168 cggcgctggcggtggtggacg 188 ||||||||||||||||||||| Sbjct: 4221924 cggcgctggcggtggtggacg 4221904 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 471 cgcggatggttggtggccgg 490 |||||||||||||||||||| Sbjct: 1758468 cgcggatggttggtggccgg 1758487 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 169 ggcgctggcggtggtggacg 188 |||||||||||||||||||| Sbjct: 513625 ggcgctggcggtggtggacg 513606
>emb|AL606651.3|OSJN00092 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0088H09, complete sequence Length = 145391 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 320 ctccgccgccgctgcctcctcgccg 344 |||||||||||| |||||||||||| Sbjct: 52874 ctccgccgccgccgcctcctcgccg 52898
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 cgatccgatccgccgccgcc 111 |||||||||||||||||||| Sbjct: 3543443 cgatccgatccgccgccgcc 3543462 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 205 ggacgaggcggcgctggccg 224 |||||||||||||||||||| Sbjct: 1378781 ggacgaggcggcgctggccg 1378800
>gb|CP000110.1| Synechococcus sp. CC9605, complete genome Length = 2510659 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 ggtgccggcgctggcggtgg 182 |||||||||||||||||||| Sbjct: 1773403 ggtgccggcgctggcggtgg 1773422
>ref|NM_001008985.1| Pan troglodytes fucosyltransferase 4 (alpha (1,3) fucosyltransferase, myeloid-specific) (FUT4), mRNA Length = 1218 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 322 ccgccgccgctgcctcctcg 341 |||||||||||||||||||| Sbjct: 454 ccgccgccgctgcctcctcg 435
>ref|XM_463828.1| Oryza sativa (japonica cultivar-group), mRNA Length = 687 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 323 cgccgccgctgcctcctcgc 342 |||||||||||||||||||| Sbjct: 145 cgccgccgctgcctcctcgc 164
>ref|XM_462670.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 954 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 265 cacggacgccgccacgggcg 284 |||||||||||||||||||| Sbjct: 117 cacggacgccgccacgggcg 136
>ref|NM_197233.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBb0073N24.14), mRNA Length = 513 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 319 cctccgccgccgctgcctcc 338 |||||||||||||||||||| Sbjct: 222 cctccgccgccgctgcctcc 203
>ref|NM_193960.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 453 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 321 tccgccgccgctgcctcctc 340 |||||||||||||||||||| Sbjct: 181 tccgccgccgctgcctcctc 200
>ref|NM_193931.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 492 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 325 ccgccgctgcctcctcgccg 344 |||||||||||||||||||| Sbjct: 314 ccgccgctgcctcctcgccg 295
>ref|NM_002033.2| Homo sapiens fucosyltransferase 4 (alpha (1,3) fucosyltransferase, myeloid-specific) (FUT4), mRNA Length = 5937 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 322 ccgccgccgctgcctcctcg 341 |||||||||||||||||||| Sbjct: 1002 ccgccgccgctgcctcctcg 983
>gb|BT017740.1| Zea mays clone EL01N0449B10.c mRNA sequence Length = 962 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 129 cgtgtctcctgggaggaagg 148 |||||||||||||||||||| Sbjct: 590 cgtgtctcctgggaggaagg 609
>gb|AC107085.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1764_D01, complete sequence Length = 164709 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 322 ccgccgccgctgcctcctcg 341 |||||||||||||||||||| Sbjct: 107195 ccgccgccgctgcctcctcg 107214
>gb|AC084023.8| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0062C05 map S21174S, complete sequence Length = 178867 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 319 cctccgccgccgctgcctcc 338 |||||||||||||||||||| Sbjct: 30555 cctccgccgccgctgcctcc 30536
>gb|AC164646.3| Mus musculus BAC clone RP24-262I1 from chromosome 3, complete sequence Length = 175326 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 131 tgtctcctgggaggaagggaaggg 154 |||||||||||||||| ||||||| Sbjct: 149075 tgtctcctgggaggaatggaaggg 149052
>gb|AC135423.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0015C02, complete sequence Length = 147407 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 318 gcctccgccgccgctgcctc 337 |||||||||||||||||||| Sbjct: 19237 gcctccgccgccgctgcctc 19256
>gb|AC121364.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0052E20, complete sequence Length = 162434 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 318 gcctccgccgccgctgcctc 337 |||||||||||||||||||| Sbjct: 60770 gcctccgccgccgctgcctc 60789
>gb|AC135598.4| Oryza sativa chromosome 3 BAC OSJNBb0021K20 genomic sequence, complete sequence Length = 137220 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 340 cgccgacgcccaccgccgccccgtcctc 367 |||| ||| ||||||||||||||||||| Sbjct: 95559 cgcccacggccaccgccgccccgtcctc 95532
>ref|XM_365456.1| Magnaporthe grisea 70-15 hypothetical protein (MG02158.4) partial mRNA Length = 1131 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 273 ccgccacgggcgccctgctgctgcgcgt 300 |||||| ||||||| ||||||||||||| Sbjct: 317 ccgccatgggcgccgtgctgctgcgcgt 344
>gb|AC130728.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0663C08, complete sequence Length = 142196 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 321 tccgccgccgctgcctcctc 340 |||||||||||||||||||| Sbjct: 128706 tccgccgccgctgcctcctc 128687
>gb|AE007270.1| Sinorhizobium meliloti 1021 plasmid pSymA section 76 of 121 of the complete plasmid sequence Length = 14695 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 79 atcatcggccgctcgatccgatcc 102 ||||||||||||| |||||||||| Sbjct: 1798 atcatcggccgcttgatccgatcc 1821
>ref|NM_010430.1| Mus musculus hypermethylated in cancer 1 (Hic1), mRNA Length = 3491 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 317 agcctccgccgccgctgcctcctc 340 |||| ||||||||||||||||||| Sbjct: 979 agccgccgccgccgctgcctcctc 956
>gb|AC092214.3| Homo sapiens BAC clone RP11-811J9 from 7, complete sequence Length = 72045 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 388 tcttcttcccctcttccccc 407 |||||||||||||||||||| Sbjct: 58116 tcttcttcccctcttccccc 58135
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome Length = 3928089 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 205 ggacgaggcggcgctggccg 224 |||||||||||||||||||| Sbjct: 1864778 ggacgaggcggcgctggccg 1864797
>ref|XM_862015.1| PREDICTED: Canis familiaris hypothetical protein LOC610623 (LOC610623), mRNA Length = 1002 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 322 ccgccgccgctgcctcctcg 341 |||||||||||||||||||| Sbjct: 952 ccgccgccgctgcctcctcg 971
>emb|AJ245399.2|RME245399 Sinorhizobium meliloti ORF-378 (partial), nuoJ2 gene, nuoK2 gene, nuoL2 gene, nuoM2 gene, nuoM3 gene, nuoN2 gene, nuoA2 gene, nuoB2 gene, nuoC2 gene, nuoD2 gene, nuoE2 gene, nuoF2 gene, nuoG2 gene, nuoI2 gene, nuoH2 gene and ORFX (partial) Length = 18681 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 79 atcatcggccgctcgatccgatcc 102 ||||||||||||| |||||||||| Sbjct: 13368 atcatcggccgcttgatccgatcc 13345
>gb|AC121585.3| Mus musculus BAC clone RP23-265M4 from 5, complete sequence Length = 195311 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 140 ggaggaagggaagggatgga 159 |||||||||||||||||||| Sbjct: 134760 ggaggaagggaagggatgga 134741
>emb|AL590483.32| Human DNA sequence from clone RP11-278H7 on chromosome 1 Contains the 3' end of a novel gene (LOC339529), the ZNF238 gene for zinc finger protein 238, a novel gene and a CpG island, complete sequence Length = 98228 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 483 gtggccggtggctccaggcg 502 |||||||||||||||||||| Sbjct: 53860 gtggccggtggctccaggcg 53879
>ref|XM_963325.1| PREDICTED: Tribolium castaneum similar to CG5099-PA, isoform A (LOC656824), mRNA Length = 1077 Score = 40.1 bits (20), Expect = 7.1 Identities = 32/36 (88%) Strand = Plus / Minus Query: 322 ccgccgccgctgcctcctcgccgacgcccaccgccg 357 |||||||||| ||| || ||||| |||||||||||| Sbjct: 916 ccgccgccgccgcccccacgccggcgcccaccgccg 881
>emb|Z33881.1|CHBLG C.hircus gene encoding beta-lactoglobulin Length = 8088 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 136 cctgggaggaagggaaggga 155 |||||||||||||||||||| Sbjct: 5803 cctgggaggaagggaaggga 5822
>emb|X58194.1|OSCDC28 O.sativa mRNA for cdc2+/CDC28-related protein kinase Length = 1764 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 322 ccgccgccgctgcctcctcg 341 |||||||||||||||||||| Sbjct: 122 ccgccgccgctgcctcctcg 141
>gb|AC078840.6| Oryza sativa chromosome 10 BAC OSJNBb0073N24 genomic sequence, complete sequence Length = 130058 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 319 cctccgccgccgctgcctcc 338 |||||||||||||||||||| Sbjct: 96413 cctccgccgccgctgcctcc 96394
>emb|AJ005338.1|ZMA005338 Zea mays mays, MADS-box gene Length = 838 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 129 cgtgtctcctgggaggaagg 148 |||||||||||||||||||| Sbjct: 475 cgtgtctcctgggaggaagg 494
>emb|BX569684.2|OSJN00290 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0046K02, complete sequence Length = 109366 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 325 ccgccgctgcctcctcgccg 344 |||||||||||||||||||| Sbjct: 72398 ccgccgctgcctcctcgccg 72417
>emb|AL939129.1|SCO939129 Streptomyces coelicolor A3(2) complete genome; segment 26/29 Length = 292200 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 95 tccgatccgccgccgccacc 114 |||||||||||||||||||| Sbjct: 201484 tccgatccgccgccgccacc 201503
>emb|AL939113.1|SCO939113 Streptomyces coelicolor A3(2) complete genome; segment 10/29 Length = 310550 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 268 ggacgccgccacgggcgccctgctgctg 295 |||||||||| || |||||||||||||| Sbjct: 127103 ggacgccgcctcgcgcgccctgctgctg 127076
>gb|AF521085.1| Streptomyces nanchangensis NS3226 polyether ionophore nanchangmycin biosynthetic gene cluster, complete sequence Length = 132544 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 199 cgcgggggacgaggcggcgctggc 222 |||| ||||||||||||||||||| Sbjct: 49847 cgcgcgggacgaggcggcgctggc 49870
>emb|AJ132691.1|MMU132691 Mus musculus (strain 129) partial HIC-1 gene, exon 1 Length = 511 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 317 agcctccgccgccgctgcctcctc 340 |||| ||||||||||||||||||| Sbjct: 476 agccgccgccgccgctgcctcctc 453
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 catcccggccatcatcggcc 88 |||||||||||||||||||| Sbjct: 4268830 catcccggccatcatcggcc 4268849
>gb|AC130727.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0560F03, complete sequence Length = 45160 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 321 tccgccgccgctgcctcctc 340 |||||||||||||||||||| Sbjct: 43223 tccgccgccgctgcctcctc 43242
>gb|AC161455.4| Mus musculus BAC clone RP23-272N23 from chromosome 3, complete sequence Length = 165241 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 131 tgtctcctgggaggaagggaaggg 154 |||||||||||||||| ||||||| Sbjct: 39558 tgtctcctgggaggaatggaaggg 39535
>emb|AJ831840.1| Pan troglodytes mRNA for alpha-1,3-fucosyltransferase 4 (fut4 gene) Length = 1218 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 322 ccgccgccgctgcctcctcg 341 |||||||||||||||||||| Sbjct: 454 ccgccgccgctgcctcctcg 435
>gb|AC115686.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OJ1325D05, complete sequence Length = 169500 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 205 ggacgaggcggcgctggccg 224 |||||||||||||||||||| Sbjct: 75369 ggacgaggcggcgctggccg 75350
>dbj|AP003281.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0560B06 Length = 161720 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 325 ccgccgctgcctcctcgccg 344 |||||||||||||||||||| Sbjct: 160308 ccgccgctgcctcctcgccg 160327
>emb|BX546502.7| Zebrafish DNA sequence from clone RP71-62P22 in linkage group 25, complete sequence Length = 169168 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 205 ggacgaggcggcgctggccg 224 |||||||||||||||||||| Sbjct: 85213 ggacgaggcggcgctggccg 85194
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 205 ggacgaggcggcgctggccg 224 |||||||||||||||||||| Sbjct: 3723269 ggacgaggcggcgctggccg 3723250
>gb|AE012145.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 53 of 460 of the complete genome Length = 14145 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 96 ccgatccgccgccgccacctgatc 119 |||||||||| ||||||||||||| Sbjct: 12702 ccgatccgcccccgccacctgatc 12679
>gb|AY016024.1| Takifugu rubripes alpha globin gene cluster, complete sequence Length = 35793 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 254 gacttcaccgtcacggacgccgcc 277 |||||||||||||||| ||||||| Sbjct: 17507 gacttcaccgtcacggccgccgcc 17530
>gb|AF305205.1|AF305205 Triticum aestivum cytosolic acetyl-CoA carboxylase Acc-2,2 gene, partial cds Length = 3393 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 318 gcctccgccgccgctgcctc 337 |||||||||||||||||||| Sbjct: 2191 gcctccgccgccgctgcctc 2210
>gb|S65161.1| Homo sapiens alpha(1,3)-fucosyltransferase (ELFT) gene, partial cds Length = 1349 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 322 ccgccgccgctgcctcctcg 341 |||||||||||||||||||| Sbjct: 601 ccgccgccgctgcctcctcg 582
>gb|AF263463.1|AF263463 Streptomyces olivaceus Tcm B2 oxygenase (elmG), Tcm F1 monooxygenase (elmH), Tcm F2 cyclase (elmI), and ElmJ (elmJ) genes, complete cds Length = 3164 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 279 cgggcgccctgctgctgcgc 298 |||||||||||||||||||| Sbjct: 1843 cgggcgccctgctgctgcgc 1862
>gb|AC011806.1|AC011806 Genomic Sequence For Oryza sativa Clone 10P20, Lemont Strain, Complete Sequence, complete sequence Length = 105198 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 325 ccgccgctgcctcctcgccg 344 |||||||||||||||||||| Sbjct: 97921 ccgccgctgcctcctcgccg 97940
>gb|AC091491.3| Homo sapiens chromosome 3 clone RP11-15F1 map 3p, complete sequence Length = 152888 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 139 gggaggaagggaagggatgg 158 |||||||||||||||||||| Sbjct: 54952 gggaggaagggaagggatgg 54933
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 334 cctcctcgccgacgcccacc 353 |||||||||||||||||||| Sbjct: 30350447 cctcctcgccgacgcccacc 30350466 Score = 40.1 bits (20), Expect = 7.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 80 tcatcggccgctcgatccgatccgccgccgcc 111 |||||| ||||||| |||| |||||||||||| Sbjct: 27896871 tcatcgcccgctcgctccggtccgccgccgcc 27896902
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 319 cctccgccgccgctgcctcc 338 |||||||||||||||||||| Sbjct: 3290612 cctccgccgccgctgcctcc 3290593 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 323 cgccgccgctgcctcctcgc 342 |||||||||||||||||||| Sbjct: 595725 cgccgccgctgcctcctcgc 595706
>gb|AC007249.5| Homo sapiens BAC clone RP11-320M2 from 2, complete sequence Length = 200491 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 135 tcctgggaggaagggaaggg 154 |||||||||||||||||||| Sbjct: 9270 tcctgggaggaagggaaggg 9251
>dbj|AP004752.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0501G04 Length = 156603 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 323 cgccgccgctgcctcctcgc 342 |||||||||||||||||||| Sbjct: 73778 cgccgccgctgcctcctcgc 73759
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 172 gctggcggtggtggacgcgc 191 |||||||||||||||||||| Sbjct: 3961507 gctggcggtggtggacgcgc 3961526 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 314 ttcagcctccgccgccgctgcctcctcg 341 |||||||||||||||||| || |||||| Sbjct: 3104479 ttcagcctccgccgccgccgcttcctcg 3104506
>dbj|AP003853.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0091E23 Length = 155939 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 325 ccgccgctgcctcctcgccg 344 |||||||||||||||||||| Sbjct: 66450 ccgccgctgcctcctcgccg 66469
>dbj|AP003685.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0548E04 Length = 138037 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 334 cctcctcgccgacgcccacc 353 |||||||||||||||||||| Sbjct: 97042 cctcctcgccgacgcccacc 97061
>dbj|AP003236.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0043B10 Length = 167399 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 325 ccgccgctgcctcctcgccg 344 |||||||||||||||||||| Sbjct: 116222 ccgccgctgcctcctcgccg 116241
>dbj|AP002870.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0458A05 Length = 120593 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 321 tccgccgccgctgcctcctc 340 |||||||||||||||||||| Sbjct: 24884 tccgccgccgctgcctcctc 24865
>dbj|AP003723.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0003H08 Length = 142068 Score = 40.1 bits (20), Expect = 7.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 80 tcatcggccgctcgatccgatccgccgccgcc 111 |||||| ||||||| |||| |||||||||||| Sbjct: 50794 tcatcgcccgctcgctccggtccgccgccgcc 50825
>dbj|AP006149.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1274F11 Length = 171257 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 169 ggcgctggcggtggtggacg 188 |||||||||||||||||||| Sbjct: 42960 ggcgctggcggtggtggacg 42941
>dbj|AP004843.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1103G11 Length = 182931 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 319 cctccgccgccgctgcctcc 338 |||||||||||||||||||| Sbjct: 162799 cctccgccgccgctgcctcc 162780
>dbj|AP004126.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ9003_G05 Length = 141860 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 319 cctccgccgccgctgcctcc 338 |||||||||||||||||||| Sbjct: 39472 cctccgccgccgctgcctcc 39453
>dbj|BS000218.1| Pan troglodytes chromosome 22 clone:PTB-414O06, map 22, complete sequences Length = 92059 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 422 gtccaaccatgttgattccttctt 445 ||||||| |||||||||||||||| Sbjct: 64628 gtccaactatgttgattccttctt 64651
>dbj|AK120825.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023019E06, full insert sequence Length = 1527 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 325 ccgccgctgcctcctcgccg 344 |||||||||||||||||||| Sbjct: 129 ccgccgctgcctcctcgccg 148
>dbj|AK120162.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013031C08, full insert sequence Length = 2030 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 322 ccgccgccgctgcctcctcg 341 |||||||||||||||||||| Sbjct: 173 ccgccgccgctgcctcctcg 192
>gb|AF181080.1|AF181080 Rhodobacter capsulatus putative large terminase, putative portal protein, and putative prohead protease genes, complete cds; and putative capsid protein gene, partial cds Length = 3760 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 ggtgccggcgctggcggtgg 182 |||||||||||||||||||| Sbjct: 2501 ggtgccggcgctggcggtgg 2520
>emb|AJ334179.1|HSA334179 Homo sapiens genomic sequence surrounding NotI site, clone NL1-CA18R Length = 683 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 322 ccgccgccgctgcctcctcg 341 |||||||||||||||||||| Sbjct: 361 ccgccgccgctgcctcctcg 342
>dbj|AK068386.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013145G03, full insert sequence Length = 2515 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 325 ccgccgctgcctcctcgccg 344 |||||||||||||||||||| Sbjct: 493 ccgccgctgcctcctcgccg 512
>gb|AF036582.1|AF036582 Mus musculus hypermethylated in cancer 1 (Hic1) gene, complete cds Length = 6306 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 317 agcctccgccgccgctgcctcctc 340 |||| ||||||||||||||||||| Sbjct: 3365 agccgccgccgccgctgcctcctc 3342
>gb|AF036334.1|AF036334 Mus musculus hypermethylated in cancer 1 (Hic1) mRNA, partial cds Length = 3030 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 317 agcctccgccgccgctgcctcctc 340 |||| ||||||||||||||||||| Sbjct: 513 agccgccgccgccgctgcctcctc 490
>dbj|AP000943.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-867G2, complete sequence Length = 192299 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 322 ccgccgccgctgcctcctcg 341 |||||||||||||||||||| Sbjct: 48225 ccgccgccgctgcctcctcg 48206
>gb|AY642926.1| Hordeum vulgare BAC CC24_14, complete sequence Length = 184425 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 92 cgatccgatccgccgccgcc 111 |||||||||||||||||||| Sbjct: 62094 cgatccgatccgccgccgcc 62075
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 58 acgcgtgcgcccatcccggc 77 |||||||||||||||||||| Sbjct: 1600075 acgcgtgcgcccatcccggc 1600094
>emb|AL603905.19| Mouse DNA sequence from clone RP23-143A14 on chromosome 11 Contains the 3' end of a novel gene, the Hic1 gene for hypermethylated in cancer 1, a novel gene, the gene for the ortholog of human candidate tumor suppressor in ovarian cancer 2 OVCA2, the Dph2l1 gene for DPH2-like 1 (S. cerevisiae), the Rtn4rl1 gene for reticulon 4 receptor-like 1 and two CpG islands, complete sequence Length = 209782 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 317 agcctccgccgccgctgcctcctc 340 |||| ||||||||||||||||||| Sbjct: 86775 agccgccgccgccgctgcctcctc 86798
>emb|AL606448.3|OSJN00013 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0064H22, complete sequence Length = 147214 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 265 cacggacgccgccacgggcg 284 |||||||||||||||||||| Sbjct: 137573 cacggacgccgccacgggcg 137592
>emb|CR956418.10| Pig DNA sequence from clone PigE-219P24 on chromosome 6, complete sequence Length = 173652 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 129 cgtgtctcctgggaggaagg 148 |||||||||||||||||||| Sbjct: 70148 cgtgtctcctgggaggaagg 70167
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 157 ggacgcggtgccggcgctgg 176 |||||||||||||||||||| Sbjct: 1197429 ggacgcggtgccggcgctgg 1197410
>gb|M65030.1|HUMFUCTRA Homo sapiens alpha-(1,3) fucosyltransferase gene, complete cds Length = 1256 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 322 ccgccgccgctgcctcctcg 341 |||||||||||||||||||| Sbjct: 492 ccgccgccgctgcctcctcg 473
>gb|M58597.1|HUMELFTL Human ELAM-1 ligand fucosyltransferase (ELFT) mRNA, complete cds Length = 2861 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 322 ccgccgccgctgcctcctcg 341 |||||||||||||||||||| Sbjct: 1002 ccgccgccgctgcctcctcg 983
>gb|M58596.1|HUMELFT Human ELAM-1 ligand fucosyltransferase (ELFT) mRNA, complete cds Length = 2159 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 322 ccgccgccgctgcctcctcg 341 |||||||||||||||||||| Sbjct: 511 ccgccgccgctgcctcctcg 492 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,735,175 Number of Sequences: 3902068 Number of extensions: 4735175 Number of successful extensions: 148373 Number of sequences better than 10.0: 161 Number of HSP's better than 10.0 without gapping: 176 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 140690 Number of HSP's gapped (non-prelim): 7683 length of query: 523 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 500 effective length of database: 17,143,297,704 effective search space: 8571648852000 effective search space used: 8571648852000 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
