ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart46d11 |
|---|---|
| Clone Library Name | barley_pub |
>FABI_BRANA (P80030) Enoyl-[acyl-carrier-protein] reductase [NADH], chloroplast| precursor (EC 1.3.1.9) (NADH-dependent enoyl-ACP reductase) Length = 385 Score = 95.9 bits (237), Expect = 5e-20 Identities = 62/135 (45%), Positives = 72/135 (53%), Gaps = 14/135 (10%) Frame = +1 Query: 130 APCATAGAQMLAARPCVSASQSMLTSRAAVLRINLALGAGSFASCPRIS---CSRSLG-- 294 A A + QM RP +SA+ S +R V+ N A A P +S C R+ Sbjct: 3 ATAAASSLQMATTRPSISAASSK--ARTYVVGAN-PRNAYKIACTPHLSNLGCLRNDSAL 59 Query: 295 ---------SCVAVRAVSGEGSSSGLPIDLRGKRAFIAGVADDNGYGWXXXXXXXXXXXE 447 S A+ S +SSGLPIDLRGKRAFIAG+ADDNGYGW E Sbjct: 60 PASKKSFSFSTKAMSESSESKASSGLPIDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAE 119 Query: 448 ILVGTWVPALNIFET 492 ILVGTWVPALNIFET Sbjct: 120 ILVGTWVPALNIFET 134
>ADAM2_MACFA (Q28478) ADAM 2 precursor (A disintegrin and metalloproteinase| domain 2) (Fertilin beta subunit) (PH-30) (PH30) (PH30-beta) Length = 735 Score = 35.8 bits (81), Expect = 0.064 Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 5/62 (8%) Frame = +2 Query: 23 CAHQQHAHPLCSPTQIPPS-RIPSSPEAGGSC*HGRWPLV----QLPARRCWPHAPASRP 187 C +++H H CS + +PP + S GGS G +PLV +LP RR + S+P Sbjct: 627 CNNKKHCH--CSASYLPPDCSVQSDTSPGGSIDSGNFPLVAVPARLPERRHMENVYHSKP 684 Query: 188 LR 193 +R Sbjct: 685 MR 686
>APC_HUMAN (P25054) Adenomatous polyposis coli protein (Protein APC)| Length = 2843 Score = 32.3 bits (72), Expect = 0.71 Identities = 34/109 (31%), Positives = 46/109 (42%), Gaps = 3/109 (2%) Frame = +1 Query: 16 TLLRSSTARASPVLPHPDPSL-THSVFSRGWW*LLARTMAPCATAGAQMLAARPCVSASQ 192 T ++ T SP LP D SL THS G W L ++P A R ++ S Sbjct: 2475 TRSQAQTPVLSPSLP--DMSLSTHSSVQAGGWRKLPPNLSPTIEYNDGRPAKRHDIARSH 2532 Query: 193 SMLTSRAAVLRINLALGAGS--FASCPRISCSRSLGSCVAVRAVSGEGS 333 S SR + R S +S PR+S R GS ++ + S E S Sbjct: 2533 SESPSRLPINRSGTWKREHSKHSSSLPRVSTWRRTGSSSSILSASSESS 2581 Score = 29.6 bits (65), Expect = 4.6 Identities = 25/90 (27%), Positives = 35/90 (38%) Frame = -1 Query: 444 SPSCGKSLCNCPAIAVIISNPSNKCSFPSKIDGQPRRATFS*HRSYGDTRTKRPRAGDPG 265 S S G+++ + P + N S+ S SK G P + S S G T T PR P Sbjct: 2223 SISRGRTMIHIPGVR----NSSSSTSPVSK-KGPPLKTPASKSPSEGQTATTSPRGAKPS 2277 Query: 264 TAREATSAERQVDPQDGRPRGEHTLRGRDA 175 E + RQ G + RD+ Sbjct: 2278 VKSELSPVARQTSQIGGSSKAPSRSGSRDS 2307
>GAG_HTLV2 (P03346) Gag polyprotein [Contains: Core protein p15 (p19); Core| protein p24; Core protein p12 (p15)] Length = 432 Score = 32.3 bits (72), Expect = 0.71 Identities = 27/81 (33%), Positives = 34/81 (41%), Gaps = 1/81 (1%) Frame = +2 Query: 47 PLCSPTQIPPSRIPSSPEAGGSC*HGRWPLVQLPARRCWPHAPASRPLRVCSPRGRPSCG 226 P+C PT PP P SPEA H P V+ +C+P + P G PS Sbjct: 103 PIC-PTTTPPPPPPPSPEA-----HVPPPYVEPTTTQCFP---------ILHPPGAPSAH 147 Query: 227 STWR-SALVASRAVPGSPALG 286 W+ L A + S ALG Sbjct: 148 RPWQMKDLQAIKQEVSSSALG 168
>FOXE3_MOUSE (Q9QY14) Forkhead box protein E3| Length = 288 Score = 31.2 bits (69), Expect = 1.6 Identities = 15/36 (41%), Positives = 18/36 (50%), Gaps = 1/36 (2%) Frame = +2 Query: 2 PESP-PPCCAHQQHAHPLCSPTQIPPSRIPSSPEAG 106 P +P PPCCA A P C+ PP P+S G Sbjct: 210 PVAPEPPCCAAPDAAFPPCAAAASPPLYSPASERLG 245
>ADAM2_HUMAN (Q99965) ADAM 2 precursor (A disintegrin and metalloproteinase| domain 2) (Fertilin beta subunit) (PH-30) (PH30) Length = 735 Score = 31.2 bits (69), Expect = 1.6 Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 1/45 (2%) Frame = +2 Query: 23 CAHQQHAHPLCSPTQIPPS-RIPSSPEAGGSC*HGRWPLVQLPAR 154 C +++H H CS + +PP + S GGS G +P V +PAR Sbjct: 627 CNNKKHCH--CSASYLPPDCSVQSDLWPGGSIDSGNFPPVAIPAR 669
>Y4GJ_RHISN (P55466) Hypothetical 21.1 kDa protein y4gJ| Length = 192 Score = 31.2 bits (69), Expect = 1.6 Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 5/53 (9%) Frame = +2 Query: 146 PARRCWPHAPASRPL-----RVCSPRGRPSCGSTWRSALVASRAVPGSPALGL 289 P +R H RP+ R+C PR + T + + +A+PG+P GL Sbjct: 20 PCQRWQIHPALRRPIFRACGRICRPRRKTQIAQTIATLMRRMQAIPGTPGRGL 72
>PRDM2_HUMAN (Q13029) PR domain zinc finger protein 2 (PR domain-containing| protein 2) (Retinoblastoma protein-interacting zinc-finger protein) (Zinc finger protein RIZ) (MTE-binding protein) (MTB-ZF) (GATA-3-binding protein G3B) Length = 1718 Score = 30.8 bits (68), Expect = 2.1 Identities = 28/102 (27%), Positives = 36/102 (35%), Gaps = 8/102 (7%) Frame = +2 Query: 2 PESPPPCCAHQQHAHPLCSPTQIPPSRIPSSPEAGGSC*HGRWPLVQLPARRCWPH---- 169 P SPPPC P+ + PP +P+ P + P+ PH Sbjct: 970 PSSPPPC-------PPVLTVATPPPPLLPTVP-------------LPAPSSSASPHPCPS 1009 Query: 170 ----APASRPLRVCSPRGRPSCGSTWRSALVASRAVPGSPAL 283 A A PL + SP PS + S A PG P L Sbjct: 1010 PLSNATAQSPLPILSPTVSPSPSPIPPVEPLMSAASPGPPTL 1051
>EVX2_MOUSE (P49749) Homeobox even-skipped homolog protein 2 (EVX-2)| Length = 475 Score = 30.4 bits (67), Expect = 2.7 Identities = 22/71 (30%), Positives = 30/71 (42%) Frame = +1 Query: 130 APCATAGAQMLAARPCVSASQSMLTSRAAVLRINLALGAGSFASCPRISCSRSLGSCVAV 309 AP A AG A+ +A+ + S AA A +GS A C +SC S + A Sbjct: 349 APAAAAGLNSAASAAAAAAAAAAAASSAAAAG---APPSGSSAPCSCLSCHSSQSAAAAA 405 Query: 310 RAVSGEGSSSG 342 A + S G Sbjct: 406 AAAAAALGSRG 416
>MCSP_MOUSE (P15265) Sperm mitochondrial-associated cysteine-rich protein| Length = 143 Score = 30.4 bits (67), Expect = 2.7 Identities = 20/73 (27%), Positives = 26/73 (35%) Frame = +2 Query: 5 ESPPPCCAHQQHAHPLCSPTQIPPSRIPSSPEAGGSC*HGRWPLVQLPARRCWPHAPASR 184 + PPPCC + P C P P + P P++ C + P C P P Sbjct: 9 QCPPPCCPPK----PCCPPKPCCPQKPPCCPKS--PCCPPKSPCCPPKPCPCPPPCPCPC 62 Query: 185 PLRVCSPRGRPSC 223 P P P C Sbjct: 63 PATCPCPLKPPCC 75
>PKP3_MOUSE (Q9QY23) Plakophilin-3| Length = 797 Score = 30.0 bits (66), Expect = 3.5 Identities = 23/76 (30%), Positives = 33/76 (43%) Frame = +2 Query: 59 PTQIPPSRIPSSPEAGGSC*HGRWPLVQLPARRCWPHAPASRPLRVCSPRGRPSCGSTWR 238 PT P+R S E GG+ + + LP+ R P R V S + P+ ST+R Sbjct: 153 PTPPMPTRPVSFHERGGAASRADYDTLSLPSLRLGPGGLDDR-YSVVSEQLEPAAASTYR 211 Query: 239 SALVASRAVPGSPALG 286 + +A GS G Sbjct: 212 AYAYKRQASSGSSRAG 227
>DOIS_STRKN (Q6L738) 2-deoxy-scyllo-inosose synthase (EC 4.2.3.-) (DOI| synthase) (DOIS) Length = 390 Score = 30.0 bits (66), Expect = 3.5 Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 1/51 (1%) Frame = -2 Query: 383 PAINALFPLRSMGSPEE-LPSPDTALTATQEPRDLEQEILGQLAKLPAPSA 234 PA +P+ + SP + L S T LTA PRDL ++ +LA+ P P+A Sbjct: 328 PASADTYPMVLLESPGKVLRSEGTVLTAA--PRDLVDAVVDELAEPPRPAA 376
>PALST_EUGGR (P84739) Photoactivated adenylate cyclase alpha-subunit-like| protein ST- Length = 1019 Score = 30.0 bits (66), Expect = 3.5 Identities = 25/74 (33%), Positives = 27/74 (36%), Gaps = 1/74 (1%) Frame = -1 Query: 270 PGTAREATSAERQVDPQDGRPRGEHTLRGRDAGACGQHLRAGSCTRGHRPC*QLPPASG- 94 PG R R P GRPR H L GS TR H+ QL P Sbjct: 810 PGPGRHEEGGRRHQRPGPGRPRRGHPF-----------LPQGSTTRPHQFSVQLHPLPKL 858 Query: 93 EDGMREGGIWVGEH 52 G +GGI V H Sbjct: 859 GTGSSDGGIGVSLH 872
>VP40_HHV11 (P10210) Capsid protein P40 (Virion structural protein UL26)| [Contains: Capsid protein VP24 (EC 3.4.21.97) (Assemblin) (Protease); Capsid protein VP22A; UL26.5 protein; C-terminal peptide] Length = 635 Score = 30.0 bits (66), Expect = 3.5 Identities = 14/37 (37%), Positives = 17/37 (45%) Frame = +2 Query: 2 PESPPPCCAHQQHAHPLCSPTQIPPSRIPSSPEAGGS 112 P PPP C Q PL + PP+ S PEA + Sbjct: 566 PGPPPPPCPSTQTRAPLPTEPAFPPAATGSQPEASNA 602
>DCMC_MOUSE (Q99J39) Malonyl-CoA decarboxylase, mitochondrial precursor (EC| 4.1.1.9) (MCD) Length = 492 Score = 29.6 bits (65), Expect = 4.6 Identities = 20/50 (40%), Positives = 23/50 (46%), Gaps = 2/50 (4%) Frame = +2 Query: 146 PARRCWPHAPASRPLRVCSPRGRPSCGSTWRSAL--VASRAVPGSPALGL 289 P R P P R PRGR CG SA+ + RAVP +PA L Sbjct: 6 PGLRARRLLPLRSPPRPPGPRGRRLCGGLAASAMDELLRRAVPPTPAYEL 55
>ZN692_MOUSE (Q3U381) Zinc finger protein 692| Length = 531 Score = 29.6 bits (65), Expect = 4.6 Identities = 13/31 (41%), Positives = 15/31 (48%) Frame = +2 Query: 5 ESPPPCCAHQQHAHPLCSPTQIPPSRIPSSP 97 E P AH +HP P Q PP + SSP Sbjct: 457 EKPDSVVAHCSKSHPALLPAQEPPGSLVSSP 487
>CO2A1_RAT (P05539) Collagen alpha-1(II) chain precursor [Contains:| Chondrocalcin] Length = 1419 Score = 29.6 bits (65), Expect = 4.6 Identities = 25/67 (37%), Positives = 28/67 (41%), Gaps = 1/67 (1%) Frame = -1 Query: 282 RAGDPGTAREATSAERQVDPQDGRPRGEHTLRGRDAGACGQHLRAG-SCTRGHRPC*QLP 106 RAGDPG A + + +P D P G G G GQ G RG R LP Sbjct: 872 RAGDPGLQGPAGAPGEKGEPGDDGPSGSDGPPG-PQGLAGQRGIVGLPGQRGERGFPGLP 930 Query: 105 PASGEDG 85 SGE G Sbjct: 931 GPSGEPG 937
>IF2_STRAW (Q82K53) Translation initiation factor IF-2| Length = 1046 Score = 29.6 bits (65), Expect = 4.6 Identities = 27/74 (36%), Positives = 31/74 (41%), Gaps = 5/74 (6%) Frame = -1 Query: 288 RPRAGDPGTAREATSAERQVDPQDGR--PRGEHTLRGRDAGAC---GQHLRAGSCTRGHR 124 RP A PG AR AT + Q G RG+ RG GA GQ R G+ G R Sbjct: 154 RPGAPKPGGARPATPGQGQGGQVRGERTDRGDRGDRGDRQGAARPGGQAPRPGARPAGPR 213 Query: 123 PC*QLPPASGEDGM 82 P + G GM Sbjct: 214 PGNNPFTSGGSTGM 227
>PRDM2_RAT (Q63755) PR domain zinc finger protein 2 (PR domain-containing| protein 2) (Retinoblastoma protein-interacting zinc-finger protein) (Zinc finger protein RIZ) Length = 1706 Score = 29.6 bits (65), Expect = 4.6 Identities = 26/97 (26%), Positives = 37/97 (38%), Gaps = 3/97 (3%) Frame = +2 Query: 2 PESPPPCCAHQQHAHPLCSPTQIPPSRIPSSPEAGGSC*HGRWPLVQLPARRC---WPHA 172 P SPPPC P+ + PP +P+ P + P ++C + + Sbjct: 962 PSSPPPC-------PPVLTVATPPPPLLPTVPLS--------HPSSDASPQQCPSPFSNT 1006 Query: 173 PASRPLRVCSPRGRPSCGSTWRSALVASRAVPGSPAL 283 A PL + SP PS + S A PG P L Sbjct: 1007 TAQSPLPILSPTVSPSPSPIPPVEPLMSAASPGPPTL 1043
>EPN3_HUMAN (Q9H201) Epsin-3 (EPS-15-interacting protein 3)| Length = 632 Score = 29.6 bits (65), Expect = 4.6 Identities = 19/52 (36%), Positives = 24/52 (46%), Gaps = 5/52 (9%) Frame = -2 Query: 362 PLRSMGSPEEL-----PSPDTALTATQEPRDLEQEILGQLAKLPAPSARLIR 222 P SP EL PSP + T+EP L+ ILG+ P+ AR R Sbjct: 443 PSGKPSSPVELDLFGDPSPSSKQNGTKEPDALDLGILGEALTQPSKEARACR 494
>RP1L1_HUMAN (Q8IWN7) Retinitis pigmentosa 1-like 1 protein| Length = 2480 Score = 29.3 bits (64), Expect = 6.0 Identities = 28/86 (32%), Positives = 31/86 (36%), Gaps = 3/86 (3%) Frame = +2 Query: 38 HAHPLCSPTQIPPSRIPS---SPEAGGSC*HGRWPLVQLPARRCWPHAPASRPLRVCSPR 208 H CS P++ SPEA C R C P P RP C R Sbjct: 821 HRSHCCSQPGTQPAQEAQRGPSPEASWLC-----------GRYC-PTPPRGRP---CPQR 865 Query: 209 GRPSCGSTWRSALVASRAVPGSPALG 286 SCGST S +R GSP G Sbjct: 866 RSSSCGSTGSSHQSTARGPGGSPQEG 891
>IF2_CHRVO (Q7NY13) Translation initiation factor IF-2| Length = 964 Score = 29.3 bits (64), Expect = 6.0 Identities = 26/76 (34%), Positives = 32/76 (42%), Gaps = 6/76 (7%) Frame = -1 Query: 279 AGDPGTAREATSAERQVDPQ-----DGR-PRGEHTLRGRDAGACGQHLRAGSCTRGHRPC 118 A +P E ER+ D + D R PRG R AGA + R G RG RP Sbjct: 216 APEPAPVVEPQREERRDDRRGAPSGDNRGPRGNDNRGPRPAGAGDRGPRPGGDNRGPRPA 275 Query: 117 *QLPPASGEDGMREGG 70 +G+ G R GG Sbjct: 276 -----GAGDRGPRPGG 286
>LEXA_VIBCH (Q9KVP9) LexA repressor (EC 3.4.21.88)| Length = 209 Score = 29.3 bits (64), Expect = 6.0 Identities = 15/34 (44%), Positives = 19/34 (55%) Frame = -1 Query: 288 RPRAGDPGTAREATSAERQVDPQDGRPRGEHTLR 187 R AG+P A+E A QVDP RP+ + LR Sbjct: 88 RVAAGEPILAQEHVEAHYQVDPSMFRPQADFLLR 121
>RHO_MYCTU (P66028) Transcription termination factor rho (EC 3.6.1.-)| (ATP-dependent helicase rho) Length = 602 Score = 29.3 bits (64), Expect = 6.0 Identities = 19/54 (35%), Positives = 25/54 (46%) Frame = -1 Query: 303 DTRTKRPRAGDPGTAREATSAERQVDPQDGRPRGEHTLRGRDAGACGQHLRAGS 142 D + P + P T E T E Q+D Q + R E R+AG G RAG+ Sbjct: 90 DKGDRPPSSEAPATQGEQTPTE-QIDSQSQQVRPERRSATREAGPSGSGERAGT 142
>RHO_MYCBO (P66029) Transcription termination factor rho (EC 3.6.1.-)| (ATP-dependent helicase rho) Length = 602 Score = 29.3 bits (64), Expect = 6.0 Identities = 19/54 (35%), Positives = 25/54 (46%) Frame = -1 Query: 303 DTRTKRPRAGDPGTAREATSAERQVDPQDGRPRGEHTLRGRDAGACGQHLRAGS 142 D + P + P T E T E Q+D Q + R E R+AG G RAG+ Sbjct: 90 DKGDRPPSSEAPATQGEQTPTE-QIDSQSQQVRPERRSATREAGPSGSGERAGT 142
>RECQ5_HUMAN (O94762) ATP-dependent DNA helicase Q5 (EC 3.6.1.-) (RecQ| protein-like 5) (RecQ5) Length = 991 Score = 29.3 bits (64), Expect = 6.0 Identities = 15/44 (34%), Positives = 21/44 (47%) Frame = -2 Query: 362 PLRSMGSPEELPSPDTALTATQEPRDLEQEILGQLAKLPAPSAR 231 P R G+PE P+P + PR ++ Q K P PSA+ Sbjct: 833 PPRDQGTPEVQPTPAKDTWKGKRPRSQQENPESQPQKRPRPSAK 876
>STELO_DROME (Q9NIV2) Stellate orphon protein at 12D| Length = 172 Score = 29.3 bits (64), Expect = 6.0 Identities = 14/29 (48%), Positives = 16/29 (55%) Frame = +1 Query: 247 GSFASCPRISCSRSLGSCVAVRAVSGEGS 333 G F SCP ISC R V V AV G+ + Sbjct: 95 GDFGSCPNISCDRQNTLPVGVSAVWGKST 123
>MYF6_CHICK (Q01795) Myogenic factor 6 (Myf-6) (Muscle-specific regulatory| factor 4) Length = 242 Score = 29.3 bits (64), Expect = 6.0 Identities = 13/23 (56%), Positives = 15/23 (65%) Frame = +2 Query: 218 SCGSTWRSALVASRAVPGSPALG 286 +CGS W SA SRA+ GSP G Sbjct: 182 TCGSDWHSASDHSRALGGSPKAG 204
>COX2_BACPF (Q04441) Cytochrome c oxidase subunit 2 precursor (EC 1.9.3.1)| (Cytochrome c oxidase polypeptide II) (Cytochrome aa3 subunit 2) (Oxidase aa(3) subunit 2) Length = 342 Score = 28.9 bits (63), Expect = 7.8 Identities = 13/35 (37%), Positives = 20/35 (57%) Frame = +1 Query: 295 SCVAVRAVSGEGSSSGLPIDLRGKRAFIAGVADDN 399 SC+ AV G G+++G G+R IAG ++N Sbjct: 263 SCIGCHAVGGTGTAAGPAFTNFGEREVIAGYLENN 297
>FHL1_RAT (Q9WUH4) Four and a half LIM domains protein 1 (FHL-1)| Length = 280 Score = 28.9 bits (63), Expect = 7.8 Identities = 11/26 (42%), Positives = 13/26 (50%) Frame = -1 Query: 492 CLEYVKCRHPCTNKNFSPSCGKSLCN 415 C KC HP ++ F GK LCN Sbjct: 65 CFRCAKCLHPLASETFVSKDGKILCN 90
>FHL1_MOUSE (P97447) Four and a half LIM domains protein 1 (FHL-1) (Skeletal| muscle LIM-protein 1) (SLIM 1) (SLIM) (KyoT) (RBP-associated molecule 14-1) (RAM14-1) Length = 280 Score = 28.9 bits (63), Expect = 7.8 Identities = 11/26 (42%), Positives = 13/26 (50%) Frame = -1 Query: 492 CLEYVKCRHPCTNKNFSPSCGKSLCN 415 C KC HP ++ F GK LCN Sbjct: 65 CFRCAKCLHPLASETFVSKDGKILCN 90
>GP123_HUMAN (Q86SQ6) Probable G-protein coupled receptor 123| Length = 1280 Score = 28.9 bits (63), Expect = 7.8 Identities = 26/86 (30%), Positives = 34/86 (39%), Gaps = 2/86 (2%) Frame = +2 Query: 26 AHQQHAHPLCSPTQIPPSRIPSSPEAGGSC*HGRWPLVQLPA--RRCWPHAPASRPLRVC 199 AH H C + P S P AGG GRW + A +P A R Sbjct: 28 AHGAH----CRGGRTPQSPDSRGPTAGGHT-RGRWTYRPIEALINVSFPGAKGGR----- 77 Query: 200 SPRGRPSCGSTWRSALVASRAVPGSP 277 + G PS +RS + +A+PG P Sbjct: 78 TAEGEPSWAWVFRSGYLQRQALPGLP 103
>SC6A5_HUMAN (Q9Y345) Sodium- and chloride-dependent glycine transporter 2| (GlyT2) (GlyT-2) (Solute carrier family 6 member 5) Length = 797 Score = 28.9 bits (63), Expect = 7.8 Identities = 19/76 (25%), Positives = 27/76 (35%), Gaps = 5/76 (6%) Frame = +2 Query: 2 PESPPPCCAHQQHAHPLCSPT-----QIPPSRIPSSPEAGGSC*HGRWPLVQLPARRCWP 166 P + P A Q H C+P ++P + P P S G AR C Sbjct: 13 PANSPEAAAAQGHPDGPCAPRTSPEQELPAAAAPPPPRVPRSASTGAQTFQSADARACEA 72 Query: 167 HAPASRPLRVCSPRGR 214 P ++ SPR + Sbjct: 73 ERPGVGSCKLSSPRAQ 88
>TRI47_MOUSE (Q8C0E3) Tripartite motif protein 47| Length = 641 Score = 28.9 bits (63), Expect = 7.8 Identities = 33/114 (28%), Positives = 44/114 (38%), Gaps = 1/114 (0%) Frame = +2 Query: 11 PPPCCAHQQHAHPLCSPTQIPPSRIPSSPEAGGSC*HGRWPLVQLPAR-RCWPHAPASRP 187 P P A + +P PS P +PE C +WP + P R P A Sbjct: 85 PGPMSAPASGSTRGATPEPSAPSAPPPAPEPSAPCAPEQWPAGEEPVRCDACPEGAALPA 144 Query: 188 LRVCSPRGRPSCGSTWRSALVASRAVPGSPALGLLVLVSP*ERCQEKVALLGCP 349 C SC +++ SA +A SPAL LV P R +E + CP Sbjct: 145 ALSCL-----SCLASFCSAHLAPH--ERSPALRGHRLVPPLRRLEESL----CP 187
>CS021_PONPY (Q5RBH3) Protein C19orf21 homolog| Length = 685 Score = 28.9 bits (63), Expect = 7.8 Identities = 20/60 (33%), Positives = 24/60 (40%) Frame = -1 Query: 267 GTAREATSAERQVDPQDGRPRGEHTLRGRDAGACGQHLRAGSCTRGHRPC*QLPPASGED 88 G R+ S + P PRG H G D G L A +G RP + P GED Sbjct: 60 GVLRQGVSYSVRAYPGQPSPRGLHLETGEDEGLKVYRLGARDAHQG-RPTWAVHPEDGED 118
>PCDA4_PANTR (Q5DRE8) Protocadherin alpha 4 precursor (PCDH-alpha4)| Length = 947 Score = 28.9 bits (63), Expect = 7.8 Identities = 17/43 (39%), Positives = 22/43 (51%) Frame = +2 Query: 89 SSPEAGGSC*HGRWPLVQLPARRCWPHAPASRPLRVCSPRGRP 217 S+P G+C G+ LV A W ++ RP RVCS G P Sbjct: 724 SAPPTEGACAPGKPTLVCSSAVGSWSYSQQRRP-RVCSGEGPP 765
>IF2_SYMTH (Q67P86) Translation initiation factor IF-2| Length = 1044 Score = 28.9 bits (63), Expect = 7.8 Identities = 33/97 (34%), Positives = 41/97 (42%), Gaps = 14/97 (14%) Frame = -1 Query: 306 GDTRTKRPRAGDP---GTAREATSAERQVDPQDGRPRGEHTLRGRDAGACGQHLR-AGS- 142 G + RP + P G R A +AER+ +PQ P+ R AG GQ R AGS Sbjct: 251 GTGASSRPASAAPAAQGEKRPAAAAERREEPQAEAPQTSGPSRPVPAGP-GQPARPAGSG 309 Query: 141 ------CTRGHRPC*QLPPASGE---DGMREGGIWVG 58 G + LP GE DG R GG +G Sbjct: 310 IGVPVKPAAGGKSGLGLPTRPGEKAADGARGGGSGIG 346
>EVX2_HUMAN (Q03828) Homeobox even-skipped homolog protein 2 (EVX-2)| Length = 476 Score = 28.9 bits (63), Expect = 7.8 Identities = 21/71 (29%), Positives = 29/71 (40%) Frame = +1 Query: 130 APCATAGAQMLAARPCVSASQSMLTSRAAVLRINLALGAGSFASCPRISCSRSLGSCVAV 309 AP A AG A+ +A+ + S AA A +G A C +SC S + A Sbjct: 346 APAAAAGLNSAASAAAAAAAAAAAASSAAAAG---APPSGGSAPCSCLSCHSSQSAAAAA 402 Query: 310 RAVSGEGSSSG 342 A + S G Sbjct: 403 AAAAAALGSRG 413
>KPC1_TRIRE (Q99014) Protein kinase C-like (EC 2.7.11.13)| Length = 1139 Score = 28.9 bits (63), Expect = 7.8 Identities = 20/66 (30%), Positives = 27/66 (40%) Frame = +2 Query: 14 PPCCAHQQHAHPLCSPTQIPPSRIPSSPEAGGSC*HGRWPLVQLPARRCWPHAPASRPLR 193 PP QQ A P P Q PP + P P+ G ++ Q A++ P PA+ Sbjct: 731 PPQPQQQQQAPPAQMPPQQPPPQQPLPPQPG-----QQYQQQQPAAQKPQPQPPATAQGA 785 Query: 194 VCSPRG 211 P G Sbjct: 786 AAGPPG 791
>ELK1_HUMAN (P19419) ETS domain-containing protein Elk-1| Length = 428 Score = 28.9 bits (63), Expect = 7.8 Identities = 16/41 (39%), Positives = 20/41 (48%) Frame = -1 Query: 279 AGDPGTAREATSAERQVDPQDGRPRGEHTLRGRDAGACGQH 157 AG+ G E T AE +V PQ+G P + AG G H Sbjct: 260 AGERGFVPETTKAEPEVPPQEGVPARLPAVVMDTAGQAGGH 300
>TRI47_HUMAN (Q96LD4) Tripartite motif protein 47 (Gene overexpressed in| astrocytoma protein) (RING finger protein 100) Length = 638 Score = 28.9 bits (63), Expect = 7.8 Identities = 13/36 (36%), Positives = 16/36 (44%) Frame = +2 Query: 47 PLCSPTQIPPSRIPSSPEAGGSC*HGRWPLVQLPAR 154 P +P PS +PS PE C WP + P R Sbjct: 93 PALAPEPSAPSALPSVPEPSAPCAPEPWPAGEEPVR 128
>MLL3_HUMAN (Q8NEZ4) Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog| (Histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3) (EC 2.1.1.43) (Homologous to ALR protein) Length = 4911 Score = 28.9 bits (63), Expect = 7.8 Identities = 28/89 (31%), Positives = 39/89 (43%), Gaps = 2/89 (2%) Frame = -1 Query: 468 HPCTNKNFS-PSCGKSLCNCPAIAVIISNPSNKCSFPSKIDGQPRRATFS*HRSYGDTRT 292 HP N++F+ PS S IS P+++ + S+ G PR S +S G R+ Sbjct: 2102 HPAVNESFAHPSRAFSQPGT------ISRPTSQDPY-SQPPGTPRPVVDSYSQSSGTARS 2154 Query: 291 KR-PRAGDPGTAREATSAERQVDPQDGRP 208 P + PGT R T PQ RP Sbjct: 2155 NTDPYSQPPGTPRPTTVDPYSQQPQTPRP 2183 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 72,030,610 Number of Sequences: 219361 Number of extensions: 1588014 Number of successful extensions: 6735 Number of sequences better than 10.0: 42 Number of HSP's better than 10.0 without gapping: 6223 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6723 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3478785780 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
