ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart46d10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AB110192.1| Oryza sativa (japonica cultivar-group) mRNA for ... 230 2e-57
2dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 230 2e-57
3dbj|AP005522.2| Oryza sativa (japonica cultivar-group) genomic D... 230 2e-57
4dbj|AK106053.1| Oryza sativa (japonica cultivar-group) cDNA clon... 230 2e-57
5dbj|AK071776.1| Oryza sativa (japonica cultivar-group) cDNA clon... 230 2e-57
6gb|AY596567.1| Saccharum officinarum clone SCJFLR1035G04, comple... 141 1e-30
7gb|AY103548.1| Zea mays PCO091529 mRNA sequence 135 8e-29
8dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 100 5e-18
9dbj|AP003975.3| Oryza sativa (japonica cultivar-group) genomic D... 100 5e-18
10ref|XM_467744.1| Oryza sativa (japonica cultivar-group), mRNA 88 2e-14
11dbj|AP005297.3| Oryza sativa (japonica cultivar-group) genomic D... 88 2e-14
12ref|NM_021224.3| Homo sapiens zinc finger protein 462 (ZNF462), ... 42 0.93
13ref|XM_750526.1| Aspergillus fumigatus Af293 hypothetical protei... 42 0.93
14emb|AL512593.9| Human DNA sequence from clone RP11-508N12 on chr... 42 0.93
15gb|AC087311.23| Homo sapiens 12 BAC RP11-267D19 (Roswell Park Ca... 42 0.93
16emb|BX648965.1|HSM809116 Homo sapiens mRNA; cDNA DKFZp686L2367 (... 42 0.93
17emb|CR749850.1| Homo sapiens mRNA; cDNA DKFZp686B2325 (from clon... 42 0.93
18dbj|AK127803.1| Homo sapiens cDNA FLJ45904 fis, clone OCBBF3026361 42 0.93
19ref|XM_511771.1| PREDICTED: Pan troglodytes similar to beta-tubu... 40 3.7
20dbj|D86980.1| Homo sapiens mRNA for KIAA0227 gene, partial cds 40 3.7
21gb|AC097382.3| Homo sapiens BAC clone RP11-367J11 from 4, comple... 40 3.7
22ref|XM_938197.1| PREDICTED: Homo sapiens tetratricopeptide repea... 40 3.7
23ref|XM_027236.6| PREDICTED: Homo sapiens tetratricopeptide repea... 40 3.7
24gb|AC087222.21| Homo sapiens chromosome 17, clone RP11-497H17, c... 40 3.7
25gb|AF340166.1|AF340166 Streptomyces verticillus nonribosomal pep... 40 3.7
26dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 40 3.7
27emb|AL357153.4|CNS05TDV Human chromosome 14 DNA sequence BAC C-2... 40 3.7
28gb|AE014295.3| Bifidobacterium longum NCC2705, complete genome 40 3.7
29emb|AL590969.12| Mouse DNA sequence from clone RP23-281C18 on ch... 40 3.7 
>dbj|AB110192.1| Oryza sativa (japonica cultivar-group) mRNA for hypothetical
           protein, complete cds, clone: 21C4BG001
          Length = 1460

 Score =  230 bits (116), Expect = 2e-57
 Identities = 159/174 (91%)
 Strand = Plus / Plus

                                                                       
Query: 108 cgaccagccggacgacttcgacgagttcgactccacgccctacggnggcggntacgacct 167
           |||| |||| |||||||||||||||| |||| ||||||| ||||| ||||| ||||||||
Sbjct: 98  cgacgagcccgacgacttcgacgagtacgaccccacgccgtacggcggcggctacgacct 157

                                                                       
Query: 168 cttcgtcaccttcggccgcccgctcccgccctccgacgagacctgctacccctgctccgc 227
           |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 158 cttcatcaccttcggccgcccgctcccgccctccgacgagacctgctacccttgctccgc 217

                                                                 
Query: 228 cccctccacctcctacgatgcgccccactacgccgccgaggagccctcccccta 281
            ||||||||||||||||| || || |||||| ||||||| ||||||||||||||
Sbjct: 218 tccctccacctcctacgacgccccgcactactccgccgacgagccctcccccta 271
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score =  230 bits (116), Expect = 2e-57
 Identities = 159/174 (91%)
 Strand = Plus / Minus

                                                                           
Query: 108     cgaccagccggacgacttcgacgagttcgactccacgccctacggnggcggntacgacct 167
               |||| |||| |||||||||||||||| |||| ||||||| ||||| ||||| ||||||||
Sbjct: 6830365 cgacgagcccgacgacttcgacgagtacgaccccacgccgtacggcggcggctacgacct 6830306

                                                                           
Query: 168     cttcgtcaccttcggccgcccgctcccgccctccgacgagacctgctacccctgctccgc 227
               |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 6830305 cttcatcaccttcggccgcccgctcccgccctccgacgagacctgctacccttgctccgc 6830246

                                                                     
Query: 228     cccctccacctcctacgatgcgccccactacgccgccgaggagccctcccccta 281
                ||||||||||||||||| || || |||||| ||||||| ||||||||||||||
Sbjct: 6830245 tccctccacctcctacgacgccccgcactactccgccgacgagccctcccccta 6830192
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>dbj|AP005522.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0479H10
          Length = 139874

 Score =  230 bits (116), Expect = 2e-57
 Identities = 159/174 (91%)
 Strand = Plus / Minus

                                                                         
Query: 108   cgaccagccggacgacttcgacgagttcgactccacgccctacggnggcggntacgacct 167
             |||| |||| |||||||||||||||| |||| ||||||| ||||| ||||| ||||||||
Sbjct: 19890 cgacgagcccgacgacttcgacgagtacgaccccacgccgtacggcggcggctacgacct 19831

                                                                         
Query: 168   cttcgtcaccttcggccgcccgctcccgccctccgacgagacctgctacccctgctccgc 227
             |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 19830 cttcatcaccttcggccgcccgctcccgccctccgacgagacctgctacccttgctccgc 19771

                                                                   
Query: 228   cccctccacctcctacgatgcgccccactacgccgccgaggagccctcccccta 281
              ||||||||||||||||| || || |||||| ||||||| ||||||||||||||
Sbjct: 19770 tccctccacctcctacgacgccccgcactactccgccgacgagccctcccccta 19717
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>dbj|AK106053.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-206-F05, full
           insert sequence
          Length = 1493

 Score =  230 bits (116), Expect = 2e-57
 Identities = 159/174 (91%)
 Strand = Plus / Plus

                                                                       
Query: 108 cgaccagccggacgacttcgacgagttcgactccacgccctacggnggcggntacgacct 167
           |||| |||| |||||||||||||||| |||| ||||||| ||||| ||||| ||||||||
Sbjct: 107 cgacgagcccgacgacttcgacgagtacgaccccacgccgtacggcggcggctacgacct 166

                                                                       
Query: 168 cttcgtcaccttcggccgcccgctcccgccctccgacgagacctgctacccctgctccgc 227
           |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 167 cttcatcaccttcggccgcccgctcccgccctccgacgagacctgctacccttgctccgc 226

                                                                 
Query: 228 cccctccacctcctacgatgcgccccactacgccgccgaggagccctcccccta 281
            ||||||||||||||||| || || |||||| ||||||| ||||||||||||||
Sbjct: 227 tccctccacctcctacgacgccccgcactactccgccgacgagccctcccccta 280
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>dbj|AK071776.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023110G05, full
           insert sequence
          Length = 1643

 Score =  230 bits (116), Expect = 2e-57
 Identities = 159/174 (91%)
 Strand = Plus / Plus

                                                                       
Query: 108 cgaccagccggacgacttcgacgagttcgactccacgccctacggnggcggntacgacct 167
           |||| |||| |||||||||||||||| |||| ||||||| ||||| ||||| ||||||||
Sbjct: 258 cgacgagcccgacgacttcgacgagtacgaccccacgccgtacggcggcggctacgacct 317

                                                                       
Query: 168 cttcgtcaccttcggccgcccgctcccgccctccgacgagacctgctacccctgctccgc 227
           |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 318 cttcatcaccttcggccgcccgctcccgccctccgacgagacctgctacccttgctccgc 377

                                                                 
Query: 228 cccctccacctcctacgatgcgccccactacgccgccgaggagccctcccccta 281
            ||||||||||||||||| || || |||||| ||||||| ||||||||||||||
Sbjct: 378 tccctccacctcctacgacgccccgcactactccgccgacgagccctcccccta 431
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>gb|AY596567.1| Saccharum officinarum clone SCJFLR1035G04, complete sequence
          Length = 1677

 Score =  141 bits (71), Expect = 1e-30
 Identities = 129/149 (86%)
 Strand = Plus / Minus

                                                                        
Query: 116  cggacgacttcgacgagttcgactccacgccctacggnggcggntacgacctcttcgtca 175
            ||||||||||||| ||||||||| ||||||| ||||| || || |||||||||  |||||
Sbjct: 1428 cggacgacttcgatgagttcgaccccacgccgtacggcggtgggtacgacctcgccgtca 1369

                                                                        
Query: 176  ccttcggccgcccgctcccgccctccgacgagacctgctacccctgctccgccccctcca 235
            |||||||||||||||| ||  | || || |||||||||||||| ||||| || |||||||
Sbjct: 1368 ccttcggccgcccgctgccttcgtcggaggagacctgctacccgtgctcggcgccctcca 1309

                                         
Query: 236  cctcctacgatgcgccccactacgccgcc 264
            |||||||||| ||||| |||||| |||||
Sbjct: 1308 cctcctacgacgcgccgcactactccgcc 1280
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>gb|AY103548.1| Zea mays PCO091529 mRNA sequence
          Length = 1541

 Score =  135 bits (68), Expect = 8e-29
 Identities = 141/166 (84%)
 Strand = Plus / Plus

                                                                        
Query: 116  cggacgacttcgacgagttcgactccacgccctacggnggcggntacgacctcttcgtca 175
            ||||||||||||| ||||||||| ||||||| ||||| || || |||||||||  |||||
Sbjct: 1008 cggacgacttcgatgagttcgaccccacgccgtacggcggtgggtacgacctcgccgtca 1067

                                                                        
Query: 176  ccttcggccgcccgctcccgccctccgacgagacctgctacccctgctccgccccctcca 235
            ||||||| |||||||| || || ||||| || ||||||||||| ||||| || ||||| |
Sbjct: 1068 ccttcggtcgcccgctgccaccgtccgaggaaacctgctacccgtgctcggcgccctcga 1127

                                                          
Query: 236  cctcctacgatgcgccccactacgccgccgaggagccctcccccta 281
            |||||||||| || || ||||||||||||   ||||| ||||||||
Sbjct: 1128 cctcctacgacgcaccgcactacgccgcctccgagccgtcccccta 1173
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 99.6 bits (50), Expect = 5e-18
 Identities = 77/86 (89%)
 Strand = Plus / Minus

                                                                            
Query: 181      ggccgcccgctcccgccctccgacgagacctgctacccctgctccgccccctccacctcc 240
                |||||||||||||  |||||||||||| || ||||||| |||||||| ||||||||||||
Sbjct: 33931973 ggccgcccgctccgaccctccgacgagtccggctacccttgctccgctccctccacctcc 33931914

                                          
Query: 241      tacgatgcgccccactacgccgccga 266
                |||||||| || |||||| |||||||
Sbjct: 33931913 tacgatgccccacactactccgccga 33931888



 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 102/122 (83%)
 Strand = Plus / Plus

                                                                            
Query: 120      cgacttcgacgagttcgactccacgccctacggnggcggntacgacctcttcgtcacctt 179
                |||||||||||||| |||| |||| || ||||| ||||| |||||| ||  | |||||||
Sbjct: 31203405 cgacttcgacgagtacgaccccaccccgtacggcggcggctacgacatcgccctcacctt 31203464

                                                                            
Query: 180      cggccgcccgctcccgccctccgacgagacctgctacccctgctccgccccctccacctc 239
                ||||||| | |||||||||||||||||||  ||| |||||  |||| || ||||| ||||
Sbjct: 31203465 cggccgcgccctcccgccctccgacgagatatgccaccccatctccaccgcctcctcctc 31203524

                  
Query: 240      ct 241
                ||
Sbjct: 31203525 ct 31203526
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>dbj|AP003975.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1004_E04
          Length = 133621

 Score = 99.6 bits (50), Expect = 5e-18
 Identities = 77/86 (89%)
 Strand = Plus / Minus

                                                                         
Query: 181   ggccgcccgctcccgccctccgacgagacctgctacccctgctccgccccctccacctcc 240
             |||||||||||||  |||||||||||| || ||||||| |||||||| ||||||||||||
Sbjct: 90936 ggccgcccgctccgaccctccgacgagtccggctacccttgctccgctccctccacctcc 90877

                                       
Query: 241   tacgatgcgccccactacgccgccga 266
             |||||||| || |||||| |||||||
Sbjct: 90876 tacgatgccccacactactccgccga 90851
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>ref|XM_467744.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 546

 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 102/122 (83%)
 Strand = Plus / Plus

                                                                       
Query: 120 cgacttcgacgagttcgactccacgccctacggnggcggntacgacctcttcgtcacctt 179
           |||||||||||||| |||| |||| || ||||| ||||| |||||| ||  | |||||||
Sbjct: 48  cgacttcgacgagtacgaccccaccccgtacggcggcggctacgacatcgccctcacctt 107

                                                                       
Query: 180 cggccgcccgctcccgccctccgacgagacctgctacccctgctccgccccctccacctc 239
           ||||||| | |||||||||||||||||||  ||| |||||  |||| || ||||| ||||
Sbjct: 108 cggccgcgccctcccgccctccgacgagatatgccaccccatctccaccgcctcctcctc 167

             
Query: 240 ct 241
           ||
Sbjct: 168 ct 169
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>dbj|AP005297.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1734_E02
          Length = 168566

 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 102/122 (83%)
 Strand = Plus / Plus

                                                                         
Query: 120   cgacttcgacgagttcgactccacgccctacggnggcggntacgacctcttcgtcacctt 179
             |||||||||||||| |||| |||| || ||||| ||||| |||||| ||  | |||||||
Sbjct: 83248 cgacttcgacgagtacgaccccaccccgtacggcggcggctacgacatcgccctcacctt 83307

                                                                         
Query: 180   cggccgcccgctcccgccctccgacgagacctgctacccctgctccgccccctccacctc 239
             ||||||| | |||||||||||||||||||  ||| |||||  |||| || ||||| ||||
Sbjct: 83308 cggccgcgccctcccgccctccgacgagatatgccaccccatctccaccgcctcctcctc 83367

               
Query: 240   ct 241
             ||
Sbjct: 83368 ct 83369
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>ref|NM_021224.3| Homo sapiens zinc finger protein 462 (ZNF462), mRNA
          Length = 8310

 Score = 42.1 bits (21), Expect = 0.93
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 59   ccaccaccaacgcagcagcca 79
            |||||||||||||||||||||
Sbjct: 2033 ccaccaccaacgcagcagcca 2053
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>ref|XM_750526.1| Aspergillus fumigatus Af293 hypothetical protein (Afu2g12880)
           partial mRNA
          Length = 2412

 Score = 42.1 bits (21), Expect = 0.93
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                
Query: 210 ctgctacccctgctccgccccctccacctcctacgat 246
           ||||| |||||||||| || ||||||||||| |||||
Sbjct: 516 ctgctccccctgctcctccacctccacctccgacgat 480
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>emb|AL512593.9| Human DNA sequence from clone RP11-508N12 on chromosome 9 Contains two
             novel genes, the gene for a novel zinc finger protein
             (FLJ14960, KIAA1803), a ribosomal protein L7a (RPL7A)
             pseudogene and the 3' end of a novel gene, complete
             sequence
          Length = 148816

 Score = 42.1 bits (21), Expect = 0.93
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 59    ccaccaccaacgcagcagcca 79
             |||||||||||||||||||||
Sbjct: 47530 ccaccaccaacgcagcagcca 47550
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>gb|AC087311.23| Homo sapiens 12 BAC RP11-267D19 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 159688

 Score = 42.1 bits (21), Expect = 0.93
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 29     cgcgcccctctccccatctccccgc 53
              |||||||||||||||| ||||||||
Sbjct: 144393 cgcgcccctctccccacctccccgc 144417
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>emb|BX648965.1|HSM809116 Homo sapiens mRNA; cDNA DKFZp686L2367 (from clone DKFZp686L2367)
          Length = 8310

 Score = 42.1 bits (21), Expect = 0.93
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 59   ccaccaccaacgcagcagcca 79
            |||||||||||||||||||||
Sbjct: 2033 ccaccaccaacgcagcagcca 2053
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>emb|CR749850.1| Homo sapiens mRNA; cDNA DKFZp686B2325 (from clone DKFZp686B2325)
          Length = 7801

 Score = 42.1 bits (21), Expect = 0.93
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 59   ccaccaccaacgcagcagcca 79
            |||||||||||||||||||||
Sbjct: 1435 ccaccaccaacgcagcagcca 1455
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>dbj|AK127803.1| Homo sapiens cDNA FLJ45904 fis, clone OCBBF3026361
          Length = 3475

 Score = 42.1 bits (21), Expect = 0.93
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 59   ccaccaccaacgcagcagcca 79
            |||||||||||||||||||||
Sbjct: 2029 ccaccaccaacgcagcagcca 2049
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>ref|XM_511771.1| PREDICTED: Pan troglodytes similar to beta-tubulin cofactor D
             (LOC455000), mRNA
          Length = 21183

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 218   cctgctccgccccctccacc 237
             ||||||||||||||||||||
Sbjct: 15824 cctgctccgccccctccacc 15843
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>dbj|D86980.1| Homo sapiens mRNA for KIAA0227 gene, partial cds
          Length = 5217

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 182 gccgcccgctcccgccctcc 201
           ||||||||||||||||||||
Sbjct: 99  gccgcccgctcccgccctcc 80
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>gb|AC097382.3| Homo sapiens BAC clone RP11-367J11 from 4, complete sequence
          Length = 210515

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 29    cgcgcccctctccccatctccccg 52
             |||||||||||| |||||||||||
Sbjct: 61491 cgcgcccctctcaccatctccccg 61514
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>ref|XM_938197.1| PREDICTED: Homo sapiens tetratricopeptide repeat domain 9 (TTC9),
           mRNA
          Length = 5510

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 182 gccgcccgctcccgccctcc 201
           ||||||||||||||||||||
Sbjct: 392 gccgcccgctcccgccctcc 373
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>ref|XM_027236.6| PREDICTED: Homo sapiens tetratricopeptide repeat domain 9 (TTC9),
           mRNA
          Length = 5510

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 182 gccgcccgctcccgccctcc 201
           ||||||||||||||||||||
Sbjct: 392 gccgcccgctcccgccctcc 373
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>gb|AC087222.21| Homo sapiens chromosome 17, clone RP11-497H17, complete sequence
          Length = 70000

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 218   cctgctccgccccctccacc 237
             ||||||||||||||||||||
Sbjct: 52453 cctgctccgccccctccacc 52472
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>gb|AF340166.1|AF340166 Streptomyces verticillus nonribosomal peptide synthetase 3-2 and
           amino acid hydroxylase genes, complete cds; nonribosomal
           peptide synthetase 1 gene, partial cds; and unknown gene
          Length = 12277

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 186 cccgctcccgccctccgacg 205
           ||||||||||||||||||||
Sbjct: 317 cccgctcccgccctccgacg 336
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>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 189   gctcccgccctccgacgaga 208
             ||||||||||||||||||||
Sbjct: 37728 gctcccgccctccgacgaga 37709
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>emb|AL357153.4|CNS05TDV Human chromosome 14 DNA sequence BAC C-2540L5 of library CalTech-D from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 209483

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 182    gccgcccgctcccgccctcc 201
              ||||||||||||||||||||
Sbjct: 183327 gccgcccgctcccgccctcc 183308
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>gb|AE014295.3| Bifidobacterium longum NCC2705, complete genome
          Length = 2256640

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 115    ccggacgacttcgacgagttcgac 138
              |||||||||||||||| |||||||
Sbjct: 252861 ccggacgacttcgacgtgttcgac 252884
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>emb|AL590969.12| Mouse DNA sequence from clone RP23-281C18 on chromosome 11, complete
             sequence
          Length = 250353

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 221   gctccgccccctccacctcc 240
             ||||||||||||||||||||
Sbjct: 41594 gctccgccccctccacctcc 41613


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,773,759
Number of Sequences: 3902068
Number of extensions: 1773759
Number of successful extensions: 38445
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 38306
Number of HSP's gapped (non-prelim): 139
length of query: 283
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 261
effective length of database: 17,147,199,772
effective search space: 4475419140492
effective search space used: 4475419140492
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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