ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart46c10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT009008.1| Triticum aestivum clone wdk3c.pk0003.a5:fis, full... 852 0.0
2ref|XM_478418.1| Oryza sativa (japonica cultivar-group), mRNA 252 1e-63
3ref|XM_478419.1| Oryza sativa (japonica cultivar-group), mRNA 252 1e-63
4dbj|AK062798.1| Oryza sativa (japonica cultivar-group) cDNA clon... 252 1e-63
5gb|BT009238.1| Triticum aestivum clone wlk1.pk0001.f8:fis, full ... 165 2e-37
6dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 143 8e-31
7dbj|AP005103.5| Oryza sativa (japonica cultivar-group) genomic D... 143 8e-31
8dbj|AP005320.3| Oryza sativa (japonica cultivar-group) genomic D... 143 8e-31
9gb|BT018852.1| Zea mays clone EL01N0555H08.d mRNA sequence 125 2e-25
10gb|AY109669.1| Zea mays CL866_1 mRNA sequence 117 5e-23
11gb|AY107556.1| Zea mays PCO141359 mRNA sequence 74 6e-10
12gb|AY107267.1| Zea mays PCO073795 mRNA sequence 56 1e-04
13ref|XM_480466.1| Oryza sativa (japonica cultivar-group), mRNA 52 0.002
14dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 52 0.002
15dbj|AP005531.3| Oryza sativa (japonica cultivar-group) genomic D... 52 0.002
16dbj|AP005505.3| Oryza sativa (japonica cultivar-group) genomic D... 52 0.002
17dbj|AK110365.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.002
18ref|NM_184951.1| Oryza sativa (japonica cultivar-group), mRNA 50 0.009
19gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 50 0.009
20dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.009
21gb|AC084319.5|AC084319 Oryza sativa chromosome 3 BAC OSJNBa0004B... 50 0.009
22dbj|AK119985.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.009
23dbj|AK101593.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.009
24gb|AC091296.3| Pan troglodytes clone RP43-109G19, complete sequence 46 0.14
25dbj|AK072804.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.14
26gb|BT018695.1| Zea mays clone EL01N0513E01.d mRNA sequence 44 0.55
27gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome 44 0.55
28gb|AE005674.1| Shigella flexneri 2a str. 301, complete genome 42 2.2
29ref|XM_550383.1| Oryza sativa (japonica cultivar-group), mRNA 42 2.2
30gb|AY616610.1| Escherichia coli strain LW1655F+ SpoT (spoT) gene... 42 2.2
31gb|AE014075.1| Escherichia coli CFT073, complete genome 42 2.2
32gb|CP000243.1| Escherichia coli UTI89, complete genome 42 2.2
33gb|U00096.2| Escherichia coli K-12 MG1655, complete genome 42 2.2
34dbj|AP009048.1| Escherichia coli W3110 DNA, complete genome 42 2.2
35dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.2
36dbj|AP002903.2| Oryza sativa (japonica cultivar-group) genomic D... 42 2.2
37gb|AE014073.1| Shigella flexneri 2a str. 2457T, complete genome 42 2.2
38dbj|AP002524.2| Oryza sativa (japonica cultivar-group) genomic D... 42 2.2
39dbj|AB005237.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 42 2.2
40gb|M24503.1|ECOSPOT E. coli spoT gene encoding (p)ppGpp 3'-pyrop... 42 2.2
41gb|DQ284458.1| Solanum tuberosum clone 032F12 DNA-binding protei... 42 2.2
42gb|L10328.1|ECOUW82 E. coli; the region from 81.5 to 84.5 minutes 42 2.2
43gb|CP000038.1| Shigella sonnei Ss046, complete genome 42 2.2
44gb|AF402959.1| Oryza sativa chromosome 4 clones V17 and 214, gen... 40 8.5
45ref|XM_473964.1| Oryza sativa (japonica cultivar-group), predic... 40 8.5
46gb|AC092244.2| Drosophila melanogaster clone BACR19N22, complete... 40 8.5
47ref|XM_957434.1| Neurospora crassa OR74A hypothetical protein (N... 40 8.5
48ref|XM_329019.1| Neurospora crassa OR74A hypothetical protein (N... 40 8.5
49gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome 40 8.5
50ref|XM_898196.2| PREDICTED: Mus musculus AT rich interactive dom... 40 8.5
51ref|XM_983162.1| PREDICTED: Mus musculus AT rich interactive dom... 40 8.5
52ref|XM_139711.8| PREDICTED: Mus musculus AT rich interactive dom... 40 8.5
53ref|XM_973595.1| PREDICTED: Mus musculus AT rich interactive dom... 40 8.5
54ref|XM_983766.1| PREDICTED: Mus musculus AT rich interactive dom... 40 8.5
55gb|BC052557.1| Mus musculus AT rich interactive domain 1B (Swi1 ... 40 8.5
56gb|DP000038.2| Colobus guereza target 106 genomic scaffold 40 8.5
57emb|AL591038.9| Human DNA sequence from clone RP11-120E1 on chro... 40 8.5
58emb|AL355574.27| Human DNA sequence from clone RP11-432J22 on ch... 40 8.5
59emb|AL035045.5|HS905G11 Human DNA sequence from clone RP5-905G11... 40 8.5
60emb|AL021808.2|HS24O18 Human DNA sequence from clone XXbac-24O18... 40 8.5
61emb|AL022162.1|HS454M7 Human DNA sequence from clone RP3-454M7 o... 40 8.5
62emb|AL023653.1|HS753P9 Human DNA sequence from clone RP4-753P9 o... 40 8.5
63emb|AL606669.4|OSJN00106 Oryza sativa genomic DNA, chromosome 4,... 40 8.5
64emb|AL606645.2|OSJN00079 Oryza sativa genomic DNA, chromosome 4,... 40 8.5
65emb|AJ292768.1|NPL292768 Nicotiana plumbaginifolia partial mRNA ... 40 8.5
66emb|CR848842.7| Human DNA sequence from clone WI2-2998D17 on chr... 40 8.5
67gb|AC103925.2| Homo sapiens chromosome 1 clone RP11-567E21, comp... 40 8.5
68dbj|AK093750.1| Homo sapiens cDNA FLJ36431 fis, clone THYMU2011785 40 8.5
69gb|DP000057.1| Dasypus novemcinctus target 117 genomic scaffold 40 8.5
70dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 40 8.5
71ref|NM_164449.1| Drosophila melanogaster Suppressor of deltex CG... 40 8.5
72ref|NM_164448.1| Drosophila melanogaster Suppressor of deltex CG... 40 8.5
73gb|AF195953.2| Homo sapiens membrane-bound aminopeptidase P (XNP... 40 8.5
74ref|NM_057405.2| Drosophila melanogaster Suppressor of deltex CG... 40 8.5
75dbj|AK160334.1| Mus musculus adult male diencephalon cDNA, RIKEN... 40 8.5
76gb|DP000048.1| Cercopithecus aethiops target 106 genomic scaffold 40 8.5
77dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.5
78gb|AC119427.3| Homo sapiens chromosome 1 clone RP11-27G14, compl... 40 8.5
79dbj|AK120834.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.5
80gb|BT021390.1| Drosophila melanogaster LD32282 full insert cDNA 40 8.5
81gb|AF152865.1|AF152865 Drosophila melanogaster Suppressor of del... 40 8.5
82gb|AE003584.5| Drosophila melanogaster chromosome 2L, section 7 ... 40 8.5
83gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, co... 40 8.5
84gb|AC004716.1|AC004716 Drosophila melanogaster DNA sequence (P1 ... 40 8.5
85gb|U90212.1|NTU90212 Nicotiana tabacum DNA binding protein ACBF ... 40 8.5
86gb|AF029351.1|AF029351 Nicotiana tabacum putative RNA binding pr... 40 8.5
87dbj|AP006427.1| Lotus japonicus genomic DNA, chromosome 1, clone... 40 8.5
88dbj|AP002527.1| Escherichia coli plasmid R721 genomic DNA, comle... 40 8.5 
>gb|BT009008.1| Triticum aestivum clone wdk3c.pk0003.a5:fis, full insert mRNA
           sequence
          Length = 548

 Score =  852 bits (430), Expect = 0.0
 Identities = 501/527 (95%)
 Strand = Plus / Minus

                                                                       
Query: 5   catccgcatcagccgccgccggaaccagggaggcggggatacgtcgcgatgcagccaaca 64
           |||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||
Sbjct: 545 catccgcatcagccgccgccggaaccggggaggcggcgatacgtcgcgatgcagccaaca 486

                                                                       
Query: 65  taccaggcgccaatgaacggccagcatgcgcctcagtcgcaggcctctggggctccgcct 124
           |||||| ||||||||||||||||||| ||||||||| || ||||||||||||||||||| 
Sbjct: 485 taccagccgccaatgaacggccagcacgcgcctcagccgaaggcctctggggctccgccg 426

                                                                       
Query: 125 cctcctccgcagcaggnnnnnnngccgcagcagtactaccaggcgccgccgcagtactac 184
           ||||||| ||||||||       |||||||||||||||||||||||||||||||||||||
Sbjct: 425 cctcctctgcagcaggcacccccgccgcagcagtactaccaggcgccgccgcagtactac 366

                                                                       
Query: 185 cagcagggacccccgccggcgatgtggggccatccgcagcagcatatgcctccgcagtac 244
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 365 cagcagggacccccgccggcgatgtggggccacccgcagcagcatatgcctccgcagtac 306

                                                                       
Query: 245 gcgcccccgccgcagcagtacgcgcctcagcctcctcagcagtacgcgccgccaccgcag 304
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 305 gcgcctccgccgcagcagtacgcgcctcagcctcctcagcagtacgcgccgccgccgcag 246

                                                                       
Query: 305 cattacgcgccgcctccgctgcagtacggagcgcagatggctggcgggcctcctcccgga 364
           |||||||||||||| |||| |||||||||||||||||||||||||||||| |||||||||
Sbjct: 245 cattacgcgccgccgccgccgcagtacggagcgcagatggctggcgggccgcctcccgga 186

                                                                       
Query: 365 ggcgaggatatcaggtcgctgtggattggagatcttcagtactggatggatgagacctac 424
           |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct: 185 ggcgaggatatcaggtcgctgtggatcggagatctccagtactggatggatgagacctac 126

                                                                       
Query: 425 ctctacaacgcctttgcgcctgtggggccgcagcaggttacctcagtgaaaattatccgc 484
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 125 ctctacaacgcctttgcgcctgtggggccgcagcaggtcacctcagtgaaaattatccgc 66

                                                          
Query: 485 aacaaacacaccgggcagcctgagggttatggttttattgaatttca 531
           |||||||| || |||||||||||||||||||||||||||||||||||
Sbjct: 65  aacaaacatactgggcagcctgagggttatggttttattgaatttca 19
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>ref|XM_478418.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1302

 Score =  252 bits (127), Expect = 1e-63
 Identities = 293/348 (84%), Gaps = 9/348 (2%)
 Strand = Plus / Plus

                                                                       
Query: 281 cagcagtacgcgccgccaccgcagcattacgcgccgcctccgctgcag------tacgga 334
           ||||||||||| || || || ||||||||||||||||| |||| ||||      ||||| 
Sbjct: 73  cagcagtacgcacctccccctcagcattacgcgccgccgccgccgcagcagcagtacggg 132

                                                                       
Query: 335 gcgcagatggctggcgggcctcctcccggaggcgaggatatcaggtcgctgtggattgga 394
           ||||||||||||||||||||  |||| |||||||| || ||||||||||||||||| || 
Sbjct: 133 gcgcagatggctggcgggcccgctccgggaggcgacgagatcaggtcgctgtggatcggg 192

                                                                       
Query: 395 gatcttcagtactggatggatgagacctacctctacaacgcctttgcgcctgtggggccg 454
           ||||| ||||||||||||||||||| |||||||| |||||| ||||| ||  ||||    
Sbjct: 193 gatctccagtactggatggatgagagctacctctccaacgcttttgcccccatggg---a 249

                                                                       
Query: 455 cagcaggttacctcagtgaaaattatccgcaacaaacacaccgggcagcctgagggttat 514
           |||||||||||||| |||||| | ||||||||||| || |  |||||  |||||||||||
Sbjct: 250 cagcaggttacctctgtgaaagtcatccgcaacaagcagagtgggcactctgagggttat 309

                                                                       
Query: 515 ggttttattgaatttcaatctcgagctgctgcggaatatgctctgggcacctttaatggg 574
           ||||||||||||||||| ||||  |||||||| |||||||||||||  | ||||||||||
Sbjct: 310 ggttttattgaatttcagtctcacgctgctgcagaatatgctctggctaactttaatggg 369

                                                           
Query: 575 cagatgatgcctaatgttgaaacagtttttaagctaaactgggcttct 622
             |||||||| |||||||||   | |||| ||||||||||||||||||
Sbjct: 370 aggatgatgcttaatgttgaccaacttttcaagctaaactgggcttct 417
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>ref|XM_478419.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1156

 Score =  252 bits (127), Expect = 1e-63
 Identities = 293/348 (84%), Gaps = 9/348 (2%)
 Strand = Plus / Plus

                                                                       
Query: 281 cagcagtacgcgccgccaccgcagcattacgcgccgcctccgctgcag------tacgga 334
           ||||||||||| || || || ||||||||||||||||| |||| ||||      ||||| 
Sbjct: 173 cagcagtacgcacctccccctcagcattacgcgccgccgccgccgcagcagcagtacggg 232

                                                                       
Query: 335 gcgcagatggctggcgggcctcctcccggaggcgaggatatcaggtcgctgtggattgga 394
           ||||||||||||||||||||  |||| |||||||| || ||||||||||||||||| || 
Sbjct: 233 gcgcagatggctggcgggcccgctccgggaggcgacgagatcaggtcgctgtggatcggg 292

                                                                       
Query: 395 gatcttcagtactggatggatgagacctacctctacaacgcctttgcgcctgtggggccg 454
           ||||| ||||||||||||||||||| |||||||| |||||| ||||| ||  ||||    
Sbjct: 293 gatctccagtactggatggatgagagctacctctccaacgcttttgcccccatggg---a 349

                                                                       
Query: 455 cagcaggttacctcagtgaaaattatccgcaacaaacacaccgggcagcctgagggttat 514
           |||||||||||||| |||||| | ||||||||||| || |  |||||  |||||||||||
Sbjct: 350 cagcaggttacctctgtgaaagtcatccgcaacaagcagagtgggcactctgagggttat 409

                                                                       
Query: 515 ggttttattgaatttcaatctcgagctgctgcggaatatgctctgggcacctttaatggg 574
           ||||||||||||||||| ||||  |||||||| |||||||||||||  | ||||||||||
Sbjct: 410 ggttttattgaatttcagtctcacgctgctgcagaatatgctctggctaactttaatggg 469

                                                           
Query: 575 cagatgatgcctaatgttgaaacagtttttaagctaaactgggcttct 622
             |||||||| |||||||||   | |||| ||||||||||||||||||
Sbjct: 470 aggatgatgcttaatgttgaccaacttttcaagctaaactgggcttct 517
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>dbj|AK062798.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-107-C10, full
           insert sequence
          Length = 1157

 Score =  252 bits (127), Expect = 1e-63
 Identities = 293/348 (84%), Gaps = 9/348 (2%)
 Strand = Plus / Plus

                                                                       
Query: 281 cagcagtacgcgccgccaccgcagcattacgcgccgcctccgctgcag------tacgga 334
           ||||||||||| || || || ||||||||||||||||| |||| ||||      ||||| 
Sbjct: 174 cagcagtacgcacctccccctcagcattacgcgccgccgccgccgcagcagcagtacggg 233

                                                                       
Query: 335 gcgcagatggctggcgggcctcctcccggaggcgaggatatcaggtcgctgtggattgga 394
           ||||||||||||||||||||  |||| |||||||| || ||||||||||||||||| || 
Sbjct: 234 gcgcagatggctggcgggcccgctccgggaggcgacgagatcaggtcgctgtggatcggg 293

                                                                       
Query: 395 gatcttcagtactggatggatgagacctacctctacaacgcctttgcgcctgtggggccg 454
           ||||| ||||||||||||||||||| |||||||| |||||| ||||| ||  ||||    
Sbjct: 294 gatctccagtactggatggatgagagctacctctccaacgcttttgcccccatggg---a 350

                                                                       
Query: 455 cagcaggttacctcagtgaaaattatccgcaacaaacacaccgggcagcctgagggttat 514
           |||||||||||||| |||||| | ||||||||||| || |  |||||  |||||||||||
Sbjct: 351 cagcaggttacctctgtgaaagtcatccgcaacaagcagagtgggcactctgagggttat 410

                                                                       
Query: 515 ggttttattgaatttcaatctcgagctgctgcggaatatgctctgggcacctttaatggg 574
           ||||||||||||||||| ||||  |||||||| |||||||||||||  | ||||||||||
Sbjct: 411 ggttttattgaatttcagtctcacgctgctgcagaatatgctctggctaactttaatggg 470

                                                           
Query: 575 cagatgatgcctaatgttgaaacagtttttaagctaaactgggcttct 622
             |||||||| |||||||||   | |||| ||||||||||||||||||
Sbjct: 471 aggatgatgcttaatgttgaccaacttttcaagctaaactgggcttct 518
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>gb|BT009238.1| Triticum aestivum clone wlk1.pk0001.f8:fis, full insert mRNA
           sequence
          Length = 1160

 Score =  165 bits (83), Expect = 2e-37
 Identities = 92/95 (96%)
 Strand = Plus / Plus

                                                                       
Query: 533 tctcgagctgctgcggaatatgctctgggcacctttaatgggcagatgatgcctaatgtt 592
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 12  tctcgagctgctgcggaatatgctctggggacctttaatgggcagatgatgcctaatgtt 71

                                              
Query: 593 gaaacagtttttaagctaaactgggcttcttgtag 627
           |||  ||||||||||||||||||||||||||||||
Sbjct: 72  gaacaagtttttaagctaaactgggcttcttgtag 106
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  143 bits (72), Expect = 8e-31
 Identities = 143/167 (85%), Gaps = 6/167 (3%)
 Strand = Plus / Plus

                                                                            
Query: 281      cagcagtacgcgccgccaccgcagcattacgcgccgcctccgctgcag------tacgga 334
                ||||||||||| || || || ||||||||||||||||| |||| ||||      ||||| 
Sbjct: 19867036 cagcagtacgcacctccccctcagcattacgcgccgccgccgccgcagcagcagtacggg 19867095

                                                                            
Query: 335      gcgcagatggctggcgggcctcctcccggaggcgaggatatcaggtcgctgtggattgga 394
                ||||||||||||||||||||  |||| |||||||| || ||||||||||||||||| || 
Sbjct: 19867096 gcgcagatggctggcgggcccgctccgggaggcgacgagatcaggtcgctgtggatcggg 19867155

                                                               
Query: 395      gatcttcagtactggatggatgagacctacctctacaacgcctttgc 441
                ||||| ||||||||||||||||||| |||||||| |||||| |||||
Sbjct: 19867156 gatctccagtactggatggatgagagctacctctccaacgcttttgc 19867202



 Score =  139 bits (70), Expect = 1e-29
 Identities = 142/166 (85%)
 Strand = Plus / Plus

                                                                            
Query: 457      gcaggttacctcagtgaaaattatccgcaacaaacacaccgggcagcctgagggttatgg 516
                |||||||||||| |||||| | ||||||||||| || |  |||||  |||||||||||||
Sbjct: 19867916 gcaggttacctctgtgaaagtcatccgcaacaagcagagtgggcactctgagggttatgg 19867975

                                                                            
Query: 517      ttttattgaatttcaatctcgagctgctgcggaatatgctctgggcacctttaatgggca 576
                ||||||||||||||| ||||  |||||||| |||||||||||||  | ||||||||||  
Sbjct: 19867976 ttttattgaatttcagtctcacgctgctgcagaatatgctctggctaactttaatgggag 19868035

                                                              
Query: 577      gatgatgcctaatgttgaaacagtttttaagctaaactgggcttct 622
                |||||||| |||||||||   | |||| ||||||||||||||||||
Sbjct: 19868036 gatgatgcttaatgttgaccaacttttcaagctaaactgggcttct 19868081



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 197      ccgccggcgatgtggggccatccgc 221
                |||||||||||||||||||| ||||
Sbjct: 19866955 ccgccggcgatgtggggccagccgc 19866979
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>dbj|AP005103.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBa0036M16
          Length = 158880

 Score =  143 bits (72), Expect = 8e-31
 Identities = 143/167 (85%), Gaps = 6/167 (3%)
 Strand = Plus / Plus

                                                                         
Query: 281   cagcagtacgcgccgccaccgcagcattacgcgccgcctccgctgcag------tacgga 334
             ||||||||||| || || || ||||||||||||||||| |||| ||||      ||||| 
Sbjct: 31686 cagcagtacgcacctccccctcagcattacgcgccgccgccgccgcagcagcagtacggg 31745

                                                                         
Query: 335   gcgcagatggctggcgggcctcctcccggaggcgaggatatcaggtcgctgtggattgga 394
             ||||||||||||||||||||  |||| |||||||| || ||||||||||||||||| || 
Sbjct: 31746 gcgcagatggctggcgggcccgctccgggaggcgacgagatcaggtcgctgtggatcggg 31805

                                                            
Query: 395   gatcttcagtactggatggatgagacctacctctacaacgcctttgc 441
             ||||| ||||||||||||||||||| |||||||| |||||| |||||
Sbjct: 31806 gatctccagtactggatggatgagagctacctctccaacgcttttgc 31852



 Score =  139 bits (70), Expect = 1e-29
 Identities = 142/166 (85%)
 Strand = Plus / Plus

                                                                         
Query: 457   gcaggttacctcagtgaaaattatccgcaacaaacacaccgggcagcctgagggttatgg 516
             |||||||||||| |||||| | ||||||||||| || |  |||||  |||||||||||||
Sbjct: 32566 gcaggttacctctgtgaaagtcatccgcaacaagcagagtgggcactctgagggttatgg 32625

                                                                         
Query: 517   ttttattgaatttcaatctcgagctgctgcggaatatgctctgggcacctttaatgggca 576
             ||||||||||||||| ||||  |||||||| |||||||||||||  | ||||||||||  
Sbjct: 32626 ttttattgaatttcagtctcacgctgctgcagaatatgctctggctaactttaatgggag 32685

                                                           
Query: 577   gatgatgcctaatgttgaaacagtttttaagctaaactgggcttct 622
             |||||||| |||||||||   | |||| ||||||||||||||||||
Sbjct: 32686 gatgatgcttaatgttgaccaacttttcaagctaaactgggcttct 32731



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 197   ccgccggcgatgtggggccatccgc 221
             |||||||||||||||||||| ||||
Sbjct: 31605 ccgccggcgatgtggggccagccgc 31629
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>dbj|AP005320.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0650C03
          Length = 144337

 Score =  143 bits (72), Expect = 8e-31
 Identities = 143/167 (85%), Gaps = 6/167 (3%)
 Strand = Plus / Plus

                                                                          
Query: 281    cagcagtacgcgccgccaccgcagcattacgcgccgcctccgctgcag------tacgga 334
              ||||||||||| || || || ||||||||||||||||| |||| ||||      ||||| 
Sbjct: 107195 cagcagtacgcacctccccctcagcattacgcgccgccgccgccgcagcagcagtacggg 107254

                                                                          
Query: 335    gcgcagatggctggcgggcctcctcccggaggcgaggatatcaggtcgctgtggattgga 394
              ||||||||||||||||||||  |||| |||||||| || ||||||||||||||||| || 
Sbjct: 107255 gcgcagatggctggcgggcccgctccgggaggcgacgagatcaggtcgctgtggatcggg 107314

                                                             
Query: 395    gatcttcagtactggatggatgagacctacctctacaacgcctttgc 441
              ||||| ||||||||||||||||||| |||||||| |||||| |||||
Sbjct: 107315 gatctccagtactggatggatgagagctacctctccaacgcttttgc 107361



 Score =  139 bits (70), Expect = 1e-29
 Identities = 142/166 (85%)
 Strand = Plus / Plus

                                                                          
Query: 457    gcaggttacctcagtgaaaattatccgcaacaaacacaccgggcagcctgagggttatgg 516
              |||||||||||| |||||| | ||||||||||| || |  |||||  |||||||||||||
Sbjct: 108075 gcaggttacctctgtgaaagtcatccgcaacaagcagagtgggcactctgagggttatgg 108134

                                                                          
Query: 517    ttttattgaatttcaatctcgagctgctgcggaatatgctctgggcacctttaatgggca 576
              ||||||||||||||| ||||  |||||||| |||||||||||||  | ||||||||||  
Sbjct: 108135 ttttattgaatttcagtctcacgctgctgcagaatatgctctggctaactttaatgggag 108194

                                                            
Query: 577    gatgatgcctaatgttgaaacagtttttaagctaaactgggcttct 622
              |||||||| |||||||||   | |||| ||||||||||||||||||
Sbjct: 108195 gatgatgcttaatgttgaccaacttttcaagctaaactgggcttct 108240



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 197    ccgccggcgatgtggggccatccgc 221
              |||||||||||||||||||| ||||
Sbjct: 107114 ccgccggcgatgtggggccagccgc 107138
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>gb|BT018852.1| Zea mays clone EL01N0555H08.d mRNA sequence
          Length = 1780

 Score =  125 bits (63), Expect = 2e-25
 Identities = 199/243 (81%), Gaps = 6/243 (2%)
 Strand = Plus / Plus

                                                                       
Query: 383 ctgtggattggagatcttcagtactggatggatgagacctacctc---tacaacgccttt 439
           |||||||||||||||||||||||||||||||| |||| ||| |||   ||||||||||| 
Sbjct: 466 ctgtggattggagatcttcagtactggatggacgagaactatctccactacaacgccttc 525

                                                                       
Query: 440 gcgcctgtggggccgcagcaggttacctcagtgaaaattatccgcaacaaacacaccggg 499
           ||||||||||   | |||||| || |||| ||||||||||| || ||||| || || |||
Sbjct: 526 gcgcctgtgg---cccagcagattgcctctgtgaaaattatacggaacaagcagactggg 582

                                                                       
Query: 500 cagcctgagggttatggttttattgaatttcaatctcgagctgctgcggaatatgctctg 559
           ||  | || ||||||||||||||||| ||| | |||| ||| ||||| ||| || |||||
Sbjct: 583 cactcagaaggttatggttttattgagttttactctcaagccgctgcagaacatactctg 642

                                                                       
Query: 560 ggcacctttaatgggcagatgatgcctaatgttgaaacagtttttaagctaaactgggct 619
              | ||| ||||||||||||||||| ||| |||| |  | ||||||||| || ||||||
Sbjct: 643 atgaacttcaatgggcagatgatgccgaatattgagatggcttttaagctgaattgggct 702

              
Query: 620 tct 622
           |||
Sbjct: 703 tct 705



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 60/69 (86%), Gaps = 3/69 (4%)
 Strand = Plus / Plus

                                                                       
Query: 236 ccgcagtacgcgcccccgccgcagcagtacgcgcctcagcctcctcagcagtacgcgccg 295
           |||||||||||||| ||||||| |||||||||||||   || || ||||||||||||| |
Sbjct: 346 ccgcagtacgcgcctccgccgccgcagtacgcgcct---ccgccgcagcagtacgcgcag 402

                    
Query: 296 ccaccgcag 304
           || ||||||
Sbjct: 403 ccgccgcag 411



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 72/86 (83%), Gaps = 3/86 (3%)
 Strand = Plus / Plus

                                                                       
Query: 238 gcagtacgcgcccccgccgcagcagtacgcgcctcagcctcctcagcagtacgcgccgcc 297
           |||||||||  | ||||||| |||||||||||||| ||| ||   |||||||||||| ||
Sbjct: 327 gcagtacgccgctccgccgccgcagtacgcgcctccgccgcc---gcagtacgcgcctcc 383

                                     
Query: 298 accgcagcattacgcgccgcctccgc 323
            |||||||| ||||||| ||| ||||
Sbjct: 384 gccgcagcagtacgcgcagccgccgc 409



 Score = 44.1 bits (22), Expect = 0.55
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                             
Query: 283 gcagtacgcgccgccaccgcagcattacgcgccgcctccgctgcagtacg 332
           |||||||||||| || |||| ||| |||||||| || |||| ||||||||
Sbjct: 348 gcagtacgcgcctccgccgccgcagtacgcgcctccgccgcagcagtacg 397



 Score = 44.1 bits (22), Expect = 0.55
 Identities = 46/54 (85%)
 Strand = Plus / Plus

                                                                 
Query: 238 gcagtacgcgcccccgccgcagcagtacgcgcctcagcctcctcagcagtacgc 291
           ||||||||| || || |||||||||||||| |||| ||| |  |||||||||||
Sbjct: 258 gcagtacgctccaccaccgcagcagtacgcccctccgccgcagcagcagtacgc 311



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 170 ccgccgcagtactaccagcagggaccccc 198
           ||||| ||||||||||||||||| |||||
Sbjct: 166 ccgcctcagtactaccagcagggtccccc 194



 Score = 40.1 bits (20), Expect = 8.5
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 281 cagcagtacgcgccgccaccgcagcattacgc 312
           ||||||||||| || ||||||||||| |||||
Sbjct: 256 cagcagtacgctccaccaccgcagcagtacgc 287
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>gb|AY109669.1| Zea mays CL866_1 mRNA sequence
          Length = 1821

 Score =  117 bits (59), Expect = 5e-23
 Identities = 198/243 (81%), Gaps = 6/243 (2%)
 Strand = Plus / Plus

                                                                       
Query: 383 ctgtggattggagatcttcagtactggatggatgagaccta---cctctacaacgccttt 439
           |||||||||||||||||||||||||||||||| |||| |||   || |||||||||||| 
Sbjct: 479 ctgtggattggagatcttcagtactggatggacgagaactatctccactacaacgccttc 538

                                                                       
Query: 440 gcgcctgtggggccgcagcaggttacctcagtgaaaattatccgcaacaaacacaccggg 499
           ||||||||||   | |||||| || |||| ||||||||||| || ||||| || || |||
Sbjct: 539 gcgcctgtgg---cccagcagattgcctctgtgaaaattatacggaacaagcagactggg 595

                                                                       
Query: 500 cagcctgagggttatggttttattgaatttcaatctcgagctgctgcggaatatgctctg 559
           ||  | || || |||||||||||||| ||| | |||| ||| ||||| ||| || |||||
Sbjct: 596 cactcagaaggctatggttttattgagttttactctcaagccgctgcagaacatactctg 655

                                                                       
Query: 560 ggcacctttaatgggcagatgatgcctaatgttgaaacagtttttaagctaaactgggct 619
              | ||| ||||||||||||||||| ||| |||| |  | ||||||||| || ||||||
Sbjct: 656 atgaacttcaatgggcagatgatgccgaatattgagatggcttttaagctgaattgggct 715

              
Query: 620 tct 622
           |||
Sbjct: 716 tct 718
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>gb|AY107556.1| Zea mays PCO141359 mRNA sequence
          Length = 378

 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 63/71 (88%), Gaps = 3/71 (4%)
 Strand = Plus / Plus

                                                                       
Query: 375 tcaggtcgctgtggattggagatcttcagtactggatggatgagacctacct---ctaca 431
           ||||| |||||||||| |||||||||||| |||||||||| |||| ||||||   |||||
Sbjct: 250 tcaggacgctgtggatcggagatcttcagcactggatggacgagaactacctccactaca 309

                      
Query: 432 acgcctttgcg 442
           |||||||||||
Sbjct: 310 acgcctttgcg 320



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                
Query: 254 ccgcagcagtacgcgcctcagcctcctcagcagtacgcgccgccaccgcagca 306
           |||||||||||||| |||| ||| |  ||||||||||| || |||||||||||
Sbjct: 150 ccgcagcagtacgcccctctgccgcagcagcagtacgctcctccaccgcagca 202



 Score = 40.1 bits (20), Expect = 8.5
 Identities = 64/78 (82%), Gaps = 3/78 (3%)
 Strand = Plus / Plus

                                                                       
Query: 238 gcagtacgcgcccccgccgcagcagtacgcgcctcagcctc---ctcagcagtacgcgcc 294
           |||||||||  | ||||||| ||||||| |||||| |||||   | ||||| |||||| |
Sbjct: 86  gcagtacgctgcaccgccgccgcagtacccgcctccgcctcagacgcagcattacgcgac 145

                             
Query: 295 gccaccgcagcattacgc 312
            ||||||||||| |||||
Sbjct: 146 accaccgcagcagtacgc 163
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>gb|AY107267.1| Zea mays PCO073795 mRNA sequence
          Length = 1599

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                           
Query: 497 gggcagcctgagggttatggttttattgaatt 528
           ||||| ||||||||||||||||||||||||||
Sbjct: 458 gggcaacctgagggttatggttttattgaatt 489



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                        
Query: 401 cagtactggatggatgagacctacctcta 429
           ||||||||||||||||||| |||||||||
Sbjct: 368 cagtactggatggatgagaactacctcta 396
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>ref|XM_480466.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1284

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                             
Query: 375 tcaggtcgctgtggattggagatcttcagtactggatggatgagacctac 424
           ||||| |||| ||||| || ||||| ||||||||||||||||||| ||||
Sbjct: 281 tcaggacgctctggatcggggatctccagtactggatggatgagaactac 330
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                                 
Query: 375     tcaggtcgctgtggattggagatcttcagtactggatggatgagacctac 424
               ||||| |||| ||||| || ||||| ||||||||||||||||||| ||||
Sbjct: 5266428 tcaggacgctctggatcggggatctccagtactggatggatgagaactac 5266379
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>dbj|AP005531.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:B1099H05
          Length = 186036

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                                
Query: 375    tcaggtcgctgtggattggagatcttcagtactggatggatgagacctac 424
              ||||| |||| ||||| || ||||| ||||||||||||||||||| ||||
Sbjct: 134784 tcaggacgctctggatcggggatctccagtactggatggatgagaactac 134735
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>dbj|AP005505.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0610E02
          Length = 135816

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                               
Query: 375   tcaggtcgctgtggattggagatcttcagtactggatggatgagacctac 424
             ||||| |||| ||||| || ||||| ||||||||||||||||||| ||||
Sbjct: 58016 tcaggacgctctggatcggggatctccagtactggatggatgagaactac 57967
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>dbj|AK110365.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-165-B01, full
            insert sequence
          Length = 3201

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                              
Query: 264  acgcgcctcagcctcctcagcagtacgcgccgcc 297
            |||||||||||||||||||||||  |||||||||
Sbjct: 1605 acgcgcctcagcctcctcagcagcccgcgccgcc 1572
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>ref|NM_184951.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1697

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                            
Query: 497 gggcagcctgagggttatggttttattgaattt 529
           ||||| ||||||||||||||||| |||||||||
Sbjct: 356 gggcaacctgagggttatggtttcattgaattt 388
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                                 
Query: 497      gggcagcctgagggttatggttttattgaattt 529
                ||||| ||||||||||||||||| |||||||||
Sbjct: 20467638 gggcaacctgagggttatggtttcattgaattt 20467606
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                                 
Query: 497      gggcagcctgagggttatggttttattgaattt 529
                ||||| ||||||||||||||||| |||||||||
Sbjct: 20460667 gggcaacctgagggttatggtttcattgaattt 20460635
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>gb|AC084319.5|AC084319 Oryza sativa chromosome 3 BAC OSJNBa0004B24 genomic sequence, complete
              sequence
          Length = 152883

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                               
Query: 497    gggcagcctgagggttatggttttattgaattt 529
              ||||| ||||||||||||||||| |||||||||
Sbjct: 111938 gggcaacctgagggttatggtttcattgaattt 111906
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>dbj|AK119985.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-184-F11, full
           insert sequence
          Length = 1084

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                            
Query: 497 gggcagcctgagggttatggttttattgaattt 529
           ||||| ||||||||||||||||| |||||||||
Sbjct: 344 gggcaacctgagggttatggtttcattgaattt 376
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>dbj|AK101593.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033051E20, full
           insert sequence
          Length = 1710

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                            
Query: 497 gggcagcctgagggttatggttttattgaattt 529
           ||||| ||||||||||||||||| |||||||||
Sbjct: 448 gggcaacctgagggttatggtttcattgaattt 480
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>gb|AC091296.3| Pan troglodytes clone RP43-109G19, complete sequence
          Length = 185979

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 107    gcctctggggctccgcctcctcc 129
              |||||||||||||||||||||||
Sbjct: 175023 gcctctggggctccgcctcctcc 175045
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>dbj|AK072804.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023135B10, full
           insert sequence
          Length = 1693

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                  
Query: 386 tggattggagatcttcagtactggatggatgagacctac 424
           ||||| || ||||| ||||||||||||||||||| ||||
Sbjct: 444 tggatcggggatctccagtactggatggatgagaactac 482
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>gb|BT018695.1| Zea mays clone EL01N0513E01.d mRNA sequence
          Length = 1869

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 150 cgcagcagtactaccaggcgccgccgcagt 179
           ||||||||||| | ||||||||||||||||
Sbjct: 120 cgcagcagtaccagcaggcgccgccgcagt 149
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>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome
          Length = 7074893

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                            
Query: 84     gccagcatgcgcctcagtcgcaggcctctg 113
              ||||||| |||||||||| |||||||||||
Sbjct: 112241 gccagcaagcgcctcagttgcaggcctctg 112212
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>gb|AE005674.1| Shigella flexneri 2a str. 301, complete genome
          Length = 4607203

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 560     ggcacctttaatgggcagatg 580
               |||||||||||||||||||||
Sbjct: 3794404 ggcacctttaatgggcagatg 3794384
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>ref|XM_550383.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1365

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 114 gggctccgcctcctcctccgc 134
           |||||||||||||||||||||
Sbjct: 222 gggctccgcctcctcctccgc 242
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>gb|AY616610.1| Escherichia coli strain LW1655F+ SpoT (spoT) gene, complete cds
          Length = 2115

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 560  ggcacctttaatgggcagatg 580
            |||||||||||||||||||||
Sbjct: 1695 ggcacctttaatgggcagatg 1675
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>gb|AE014075.1| Escherichia coli CFT073, complete genome
          Length = 5231428

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 560     ggcacctttaatgggcagatg 580
               |||||||||||||||||||||
Sbjct: 4255090 ggcacctttaatgggcagatg 4255070
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>gb|CP000243.1| Escherichia coli UTI89, complete genome
          Length = 5065741

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 560     ggcacctttaatgggcagatg 580
               |||||||||||||||||||||
Sbjct: 4082620 ggcacctttaatgggcagatg 4082600
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>gb|U00096.2| Escherichia coli K-12 MG1655, complete genome
          Length = 4639675

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 560     ggcacctttaatgggcagatg 580
               |||||||||||||||||||||
Sbjct: 3822111 ggcacctttaatgggcagatg 3822091
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>dbj|AP009048.1| Escherichia coli W3110 DNA, complete genome
          Length = 4646332

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 560     ggcacctttaatgggcagatg 580
               |||||||||||||||||||||
Sbjct: 3816327 ggcacctttaatgggcagatg 3816347
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 114     gggctccgcctcctcctccgc 134
               |||||||||||||||||||||
Sbjct: 4080537 gggctccgcctcctcctccgc 4080557
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>dbj|AP002903.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0509B06
          Length = 104515

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 114   gggctccgcctcctcctccgc 134
             |||||||||||||||||||||
Sbjct: 47280 gggctccgcctcctcctccgc 47300
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>gb|AE014073.1| Shigella flexneri 2a str. 2457T, complete genome
          Length = 4599354

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 560     ggcacctttaatgggcagatg 580
               |||||||||||||||||||||
Sbjct: 3980853 ggcacctttaatgggcagatg 3980873
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>dbj|AP002524.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0406H10
          Length = 156419

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 114   gggctccgcctcctcctccgc 134
             |||||||||||||||||||||
Sbjct: 27508 gggctccgcctcctcctccgc 27528
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>dbj|AB005237.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MJJ3
          Length = 87835

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 509   ggttatggttttattgaattt 529
             |||||||||||||||||||||
Sbjct: 39976 ggttatggttttattgaattt 39996
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>gb|M24503.1|ECOSPOT E. coli spoT gene encoding (p)ppGpp 3'-pyrophosphohydrolase, omega
            (rpoZ) protein genes, complete cds
          Length = 3171

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 560  ggcacctttaatgggcagatg 580
            |||||||||||||||||||||
Sbjct: 2049 ggcacctttaatgggcagatg 2029
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>gb|DQ284458.1| Solanum tuberosum clone 032F12 DNA-binding protein-like mRNA,
           complete cds
          Length = 1359

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 48/57 (84%)
 Strand = Plus / Plus

                                                                    
Query: 361 cggaggcgaggatatcaggtcgctgtggattggagatcttcagtactggatggatga 417
           |||| |||| |||| |||| || | |||||||| ||||||||| | |||||||||||
Sbjct: 269 cggaagcgaagataacaggacgatctggattggcgatcttcagcagtggatggatga 325
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>gb|L10328.1|ECOUW82 E. coli; the region from 81.5 to 84.5 minutes
          Length = 136254

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 560   ggcacctttaatgggcagatg 580
             |||||||||||||||||||||
Sbjct: 13480 ggcacctttaatgggcagatg 13460
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>gb|CP000038.1| Shigella sonnei Ss046, complete genome
          Length = 4825265

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 560     ggcacctttaatgggcagatg 580
               |||||||||||||||||||||
Sbjct: 3943013 ggcacctttaatgggcagatg 3943033
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>gb|AF402959.1| Oryza sativa chromosome 4 clones V17 and 214, genomic sequence
          Length = 64224

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 197   ccgccggcgatgtggggcca 216
             ||||||||||||||||||||
Sbjct: 20527 ccgccggcgatgtggggcca 20546
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>ref|XM_473964.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1245

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 197 ccgccggcgatgtggggcca 216
           ||||||||||||||||||||
Sbjct: 112 ccgccggcgatgtggggcca 131
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>gb|AC092244.2| Drosophila melanogaster clone BACR19N22, complete sequence
          Length = 171000

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 111    ctggggctccgcctcctcctccgc 134
              |||| |||||||||||||||||||
Sbjct: 110813 ctggtgctccgcctcctcctccgc 110790
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>ref|XM_957434.1| Neurospora crassa OR74A hypothetical protein (NCU08314.1) partial
           mRNA
          Length = 516

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 182 taccagcagggacccccgcc 201
           ||||||||||||||||||||
Sbjct: 298 taccagcagggacccccgcc 317
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>ref|XM_329019.1| Neurospora crassa OR74A hypothetical protein (NCU08314.1) partial
           mRNA
          Length = 516

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 182 taccagcagggacccccgcc 201
           ||||||||||||||||||||
Sbjct: 298 taccagcagggacccccgcc 317
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>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome
          Length = 5650368

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 298     accgcagcattacgcgccgc 317
               ||||||||||||||||||||
Sbjct: 1983121 accgcagcattacgcgccgc 1983102
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>ref|XM_898196.2| PREDICTED: Mus musculus AT rich interactive domain 1B (Swi1 like),
           transcript variant 3 (Arid1b), mRNA
          Length = 1156

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 218 ccgcagcagcatatgcctccgcagtacg 245
           ||||||||||| ||||| ||||||||||
Sbjct: 256 ccgcagcagcagatgccaccgcagtacg 283
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>ref|XM_983162.1| PREDICTED: Mus musculus AT rich interactive domain 1B (Swi1 like),
           transcript variant 4 (Arid1b), mRNA
          Length = 9888

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 218 ccgcagcagcatatgcctccgcagtacg 245
           ||||||||||| ||||| ||||||||||
Sbjct: 256 ccgcagcagcagatgccaccgcagtacg 283
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>ref|XM_139711.8| PREDICTED: Mus musculus AT rich interactive domain 1B (Swi1 like),
            transcript variant 1 (Arid1b), mRNA
          Length = 11325

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 218  ccgcagcagcatatgcctccgcagtacg 245
            ||||||||||| ||||| ||||||||||
Sbjct: 1603 ccgcagcagcagatgccaccgcagtacg 1630
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>ref|XM_973595.1| PREDICTED: Mus musculus AT rich interactive domain 1B (Swi1 like)
            (Arid1b), mRNA
          Length = 11836

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 218  ccgcagcagcatatgcctccgcagtacg 245
            ||||||||||| ||||| ||||||||||
Sbjct: 2114 ccgcagcagcagatgccaccgcagtacg 2141
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>ref|XM_983766.1| PREDICTED: Mus musculus AT rich interactive domain 1B (Swi1 like)
            (Arid1b), mRNA
          Length = 11501

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 218  ccgcagcagcatatgcctccgcagtacg 245
            ||||||||||| ||||| ||||||||||
Sbjct: 1779 ccgcagcagcagatgccaccgcagtacg 1806
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>gb|BC052557.1| Mus musculus AT rich interactive domain 1B (Swi1 like), mRNA (cDNA
           clone IMAGE:5257371)
          Length = 881

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 218 ccgcagcagcatatgcctccgcagtacg 245
           ||||||||||| ||||| ||||||||||
Sbjct: 634 ccgcagcagcagatgccaccgcagtacg 607
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>gb|DP000038.2| Colobus guereza target 106 genomic scaffold
          Length = 481828

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 268   gcctcagcctcctcagcagt 287
             ||||||||||||||||||||
Sbjct: 74005 gcctcagcctcctcagcagt 73986
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>emb|AL591038.9| Human DNA sequence from clone RP11-120E1 on chromosome 9 Contains the
            5' end of gene MGC23427 and two CpG islands, complete
            sequence
          Length = 51295

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 267  cgcctcagcctcctcagcag 286
            ||||||||||||||||||||
Sbjct: 1271 cgcctcagcctcctcagcag 1290
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>emb|AL355574.27| Human DNA sequence from clone RP11-432J22 on chromosome 9 Contains the 5'
              end of gene DKFZp434G2311, a novel gene, the GDBR1 gene for
              putative glialblastoma cell differentiation-related, 3' end
              of gene MGC23427 and five CpG islands, complete sequence
          Length = 139653

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 267    cgcctcagcctcctcagcag 286
              ||||||||||||||||||||
Sbjct: 138924 cgcctcagcctcctcagcag 138943
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>emb|AL035045.5|HS905G11 Human DNA sequence from clone RP5-905G11 on chromosome 20p11.2-12.1
           Contains a novel gene and a CpG island, complete
           sequence
          Length = 122469

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 496 cgggcagcctgagggttatg 515
           ||||||||||||||||||||
Sbjct: 740 cgggcagcctgagggttatg 721
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>emb|AL021808.2|HS24O18 Human DNA sequence from clone XXbac-24O18 on chromosome 6p21.31-22.2
             Contains a zinc finger protein pseudogene, vomeronasal
             olfactory 1 receptor chromosome 6-1 pseudogene VN1R6-1P,
             the POM121L2 gene for POM121 membrane glycoprotein (rat
             homolog)-like 2, the PRSS16 gene for thymus serine
             protease 16, ESTs, STSs, GSSs and three CpG islands,
             complete sequence
          Length = 154066

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 21    cgccggaaccagggaggcgg 40
             ||||||||||||||||||||
Sbjct: 15124 cgccggaaccagggaggcgg 15105
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>emb|AL022162.1|HS454M7 Human DNA sequence from clone RP3-454M7 on chromosome Xq25-26.3 Contains
              the 3' end of the OCRL gene for oculocerebrorenal syndrome
              of Lowe, the gene for apelin (APLN) and a CpG island,
              complete sequence
          Length = 151152

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 268    gcctcagcctcctcagcagt 287
              ||||||||||||||||||||
Sbjct: 138241 gcctcagcctcctcagcagt 138222
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>emb|AL023653.1|HS753P9 Human DNA sequence from clone RP4-753P9 on chromosome Xq25-26.1
             Contains the XPNPEP2 gene for X-prolyl aminopeptidase
             (aminopeptidase P) 2, membrane-bound and the CXorf9 gene
             for chromosome X open reading frame 9, complete sequence
          Length = 116561

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 268   gcctcagcctcctcagcagt 287
             ||||||||||||||||||||
Sbjct: 10010 gcctcagcctcctcagcagt 9991
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>emb|AL606669.4|OSJN00106 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0060E08,
             complete sequence
          Length = 166951

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 197   ccgccggcgatgtggggcca 216
             ||||||||||||||||||||
Sbjct: 26454 ccgccggcgatgtggggcca 26473
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>emb|AL606645.2|OSJN00079 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0053K19,
              complete sequence
          Length = 187601

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 197    ccgccggcgatgtggggcca 216
              ||||||||||||||||||||
Sbjct: 186858 ccgccggcgatgtggggcca 186877
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>emb|AJ292768.1|NPL292768 Nicotiana plumbaginifolia partial mRNA for RNA Binding Protein 47
           (rbp47 gene)
          Length = 1621

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 386 tggattggagatcttcagtactggatggatga 417
           |||||||| ||||||||| | |||||||||||
Sbjct: 383 tggattggtgatcttcagcagtggatggatga 414
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>emb|CR848842.7| Human DNA sequence from clone WI2-2998D17 on chromosome 1, complete
             sequence
          Length = 44069

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 267   cgcctcagcctcctcagcag 286
             ||||||||||||||||||||
Sbjct: 30617 cgcctcagcctcctcagcag 30636
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>gb|AC103925.2| Homo sapiens chromosome 1 clone RP11-567E21, complete sequence
          Length = 175291

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 268  gcctcagcctcctcagcagt 287
            ||||||||||||||||||||
Sbjct: 8095 gcctcagcctcctcagcagt 8114
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>dbj|AK093750.1| Homo sapiens cDNA FLJ36431 fis, clone THYMU2011785
          Length = 2247

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 267  cgcctcagcctcctcagcag 286
            ||||||||||||||||||||
Sbjct: 2151 cgcctcagcctcctcagcag 2132
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>gb|DP000057.1| Dasypus novemcinctus target 117 genomic scaffold
          Length = 444202

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 208    gtggggccatccgcagcagc 227
              ||||||||||||||||||||
Sbjct: 135427 gtggggccatccgcagcagc 135446
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>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 115     ggctccgcctcctcctccgc 134
               ||||||||||||||||||||
Sbjct: 3579625 ggctccgcctcctcctccgc 3579606
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>ref|NM_164449.1| Drosophila melanogaster Suppressor of deltex CG4244-RC, transcript
           variant C (Su(dx)), mRNA
          Length = 4174

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 111 ctggggctccgcctcctcctccgc 134
           |||| |||||||||||||||||||
Sbjct: 109 ctggtgctccgcctcctcctccgc 86
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>ref|NM_164448.1| Drosophila melanogaster Suppressor of deltex CG4244-RA, transcript
           variant A (Su(dx)), mRNA
          Length = 4307

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 111 ctggggctccgcctcctcctccgc 134
           |||| |||||||||||||||||||
Sbjct: 242 ctggtgctccgcctcctcctccgc 219
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>gb|AF195953.2| Homo sapiens membrane-bound aminopeptidase P (XNPEP2) gene, complete cds
          Length = 206618

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 268    gcctcagcctcctcagcagt 287
              ||||||||||||||||||||
Sbjct: 100041 gcctcagcctcctcagcagt 100022
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>ref|NM_057405.2| Drosophila melanogaster Suppressor of deltex CG4244-RB, transcript
           variant B (Su(dx)), mRNA
          Length = 4309

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 111 ctggggctccgcctcctcctccgc 134
           |||| |||||||||||||||||||
Sbjct: 244 ctggtgctccgcctcctcctccgc 221
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>dbj|AK160334.1| Mus musculus adult male diencephalon cDNA, RIKEN full-length
           enriched library, clone:9330189K18 product:Warning:
           possibly chimeric clone, full insert sequence
          Length = 1229

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 218 ccgcagcagcatatgcctccgcagtacg 245
           ||||||||||| ||||| ||||||||||
Sbjct: 330 ccgcagcagcagatgccaccgcagtacg 357
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>gb|DP000048.1| Cercopithecus aethiops target 106 genomic scaffold
          Length = 583711

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 268   gcctcagcctcctcagcagt 287
             ||||||||||||||||||||
Sbjct: 88917 gcctcagcctcctcagcagt 88898
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 197      ccgccggcgatgtggggcca 216
                ||||||||||||||||||||
Sbjct: 31853588 ccgccggcgatgtggggcca 31853607
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>gb|AC119427.3| Homo sapiens chromosome 1 clone RP11-27G14, complete sequence
          Length = 181148

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 268   gcctcagcctcctcagcagt 287
             ||||||||||||||||||||
Sbjct: 92544 gcctcagcctcctcagcagt 92525
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>dbj|AK120834.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023019P13, full
           insert sequence
          Length = 1599

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 197 ccgccggcgatgtggggcca 216
           ||||||||||||||||||||
Sbjct: 206 ccgccggcgatgtggggcca 225
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>gb|BT021390.1| Drosophila melanogaster LD32282 full insert cDNA
          Length = 3715

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 111 ctggggctccgcctcctcctccgc 134
           |||| |||||||||||||||||||
Sbjct: 325 ctggtgctccgcctcctcctccgc 302
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>gb|AF152865.1|AF152865 Drosophila melanogaster Suppressor of deltex (Su(dx)) mRNA,
           complete cds
          Length = 4311

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 111 ctggggctccgcctcctcctccgc 134
           |||| |||||||||||||||||||
Sbjct: 243 ctggtgctccgcctcctcctccgc 220
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>gb|AE003584.5| Drosophila melanogaster chromosome 2L, section 7 of 83 of the complete
              sequence
          Length = 346734

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 111    ctggggctccgcctcctcctccgc 134
              |||| |||||||||||||||||||
Sbjct: 155497 ctggtgctccgcctcctcctccgc 155474
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>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence
          Length = 2914771

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 158     tactaccaggcgccgccgca 177
               ||||||||||||||||||||
Sbjct: 2779685 tactaccaggcgccgccgca 2779704
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>gb|AC004716.1|AC004716 Drosophila melanogaster DNA sequence (P1 DS00164 (D269)), complete
             sequence
          Length = 86391

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 111   ctggggctccgcctcctcctccgc 134
             |||| |||||||||||||||||||
Sbjct: 11629 ctggtgctccgcctcctcctccgc 11606
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>gb|U90212.1|NTU90212 Nicotiana tabacum DNA binding protein ACBF mRNA, complete cds
          Length = 1556

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 386 tggattggagatcttcagtactggatggatga 417
           |||||||| ||||||||| | |||||||||||
Sbjct: 298 tggattggtgatcttcagcagtggatggatga 329
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>gb|AF029351.1|AF029351 Nicotiana tabacum putative RNA binding protein (QRRBP-1) mRNA,
           partial cds
          Length = 1682

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 386 tggattggagatcttcagtactggatggatga 417
           |||||||| ||||||||| | |||||||||||
Sbjct: 423 tggattggtgatcttcagcagtggatggatga 454
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>dbj|AP006427.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT45A23, TM0318,
              complete sequence
          Length = 117676

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 373    tatcaggtcgctgtggattg 392
              ||||||||||||||||||||
Sbjct: 103565 tatcaggtcgctgtggattg 103584
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>dbj|AP002527.1| Escherichia coli plasmid R721 genomic DNA, comlete sequence
          Length = 75582

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 292   gccgccaccgcagcattacg 311
             ||||||||||||||||||||
Sbjct: 66722 gccgccaccgcagcattacg 66703


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,547,246
Number of Sequences: 3902068
Number of extensions: 6547246
Number of successful extensions: 125364
Number of sequences better than 10.0: 88
Number of HSP's better than 10.0 without gapping: 88
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 124325
Number of HSP's gapped (non-prelim): 1018
length of query: 627
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 604
effective length of database: 17,143,297,704
effective search space: 10354551813216
effective search space used: 10354551813216
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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