Clone Name | bart46b09 |
---|---|
Clone Library Name | barley_pub |
>emb|AJ310426.1|HVU310426 Hordeum vulgare mRNA for cathepsin B (cathB gene) Length = 1277 Score = 924 bits (466), Expect = 0.0 Identities = 466/466 (100%) Strand = Plus / Plus Query: 141 ccccagctcgccggagcggcagggggaggccattccctaggaatcatccagaaaggcatc 200 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131 ccccagctcgccggagcggcagggggaggccattccctaggaatcatccagaaaggcatc 190 Query: 201 atacagacggtcaacaaccatcccaacgccggatggacggctggacacaacccctacctc 260 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 191 atacagacggtcaacaaccatcccaacgccggatggacggctggacacaacccctacctc 250 Query: 261 gccaattacactattgagcaatttaagcatatgctgggagtgaaaccaacacctccaggt 320 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 251 gccaattacactattgagcaatttaagcatatgctgggagtgaaaccaacacctccaggt 310 Query: 321 ttactggctggtgttcgaaccaaaactcatccaaggtcagagcagctcccaaaggagttc 380 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 311 ttactggctggtgttcgaaccaaaactcatccaaggtcagagcagctcccaaaggagttc 370 Query: 381 gacgccaggtcgaaatggtccggttgcagcacaattgggaaaatacttgatcaaggtcac 440 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 371 gacgccaggtcgaaatggtccggttgcagcacaattgggaaaatacttgatcaaggtcac 430 Query: 441 tgcggttcctgttgggcttttggagctgtggagtgtctgcaagatcgtttctgcatccat 500 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 431 tgcggttcctgttgggcttttggagctgtggagtgtctgcaagatcgtttctgcatccat 490 Query: 501 cacaacatgaacatttcactttctgccaatgacctagtggcttgctgtgggtttatgtgt 560 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 491 cacaacatgaacatttcactttctgccaatgacctagtggcttgctgtgggtttatgtgt 550 Query: 561 ggtgatggttgtgatggaggatatcctatcagcgcatggcaatact 606 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 551 ggtgatggttgtgatggaggatatcctatcagcgcatggcaatact 596 Score = 212 bits (107), Expect = 1e-51 Identities = 107/107 (100%) Strand = Plus / Plus Query: 17 agcagctacctcctccgcttgcttcctcctccctcccaccgtgcgtcgccgatcgaggac 76 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7 agcagctacctcctccgcttgcttcctcctccctcccaccgtgcgtcgccgatcgaggac 66 Query: 77 gaagatggggagcggcctgctcccgctggcgctgctcgtcgtcctct 123 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 67 gaagatggggagcggcctgctcccgctggcgctgctcgtcgtcctct 113
>emb|X66012.1|TACATHBA T.aestivum mRNA 1 for cathepsin B (2529) Length = 1065 Score = 644 bits (325), Expect = 0.0 Identities = 388/409 (94%) Strand = Plus / Plus Query: 198 atcatacagacggtcaacaaccatcccaacgccggatggacggctggacacaacccctac 257 |||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 1 atcatacaaacggtcaacaaccaccccaacgccggatggacggctggacacaacccctac 60 Query: 258 ctcgccaattacactattgagcaatttaagcatatgctgggagtgaaaccaacacctcca 317 ||||| ||||||||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 61 ctcgcgaattacactattgagcaatttaagcatatgctgggagtgaagccaacgcctcca 120 Query: 318 ggtttactggctggtgttcgaaccaaaactcatccaaggtcagagcagctcccaaaggag 377 ||||||| ||||| |||||| |||||||||||| |||| || |||||||||||||||| | Sbjct: 121 ggtttacgggctgctgttcgcaccaaaactcattcaagatcggagcagctcccaaaggtg 180 Query: 378 ttcgacgccaggtcgaaatggtccggttgcagcacaattgggaaaatacttgatcaaggt 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 ttcgacgccaggtcgaaatggtccggttgcagcacaattgggaaaatacttgatcaaggt 240 Query: 438 cactgcggttcctgttgggcttttggagctgtggagtgtctgcaagatcgtttctgcatc 497 ||||| |||||||| ||||||||||| || |||||||| ||||||||||||||||||||| Sbjct: 241 cactgtggttcctgctgggcttttggtgccgtggagtgcctgcaagatcgtttctgcatc 300 Query: 498 catcacaacatgaacatttcactttctgccaatgacctagtggcttgctgtgggtttatg 557 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 catcacaacatgaacattacactttctgccaatgacctagtggcttgctgtgggtttatg 360 Query: 558 tgtggtgatggttgtgatggaggatatcctatcagcgcatggcaatact 606 ||||| ||||||||||||||||||||||||||||| || |||||||||| Sbjct: 361 tgtggcgatggttgtgatggaggatatcctatcagtgcgtggcaatact 409
>emb|X66015.1|TACATHBC T.aestivum mRNA 3 for cathepsin B (2557) Length = 491 Score = 462 bits (233), Expect = e-127 Identities = 305/329 (92%) Strand = Plus / Plus Query: 144 cagctcgccggagcggcagggggaggccattccctaggaatcatccagaaaggcatcata 203 ||||||| ||| || ||| || ||| |||||||||||||||||||||||||| |||||| Sbjct: 163 cagctcgtcggtgcagcaaggagagaccattccctaggaatcatccagaaagatatcata 222 Query: 204 cagacggtcaacaaccatcccaacgccggatggacggctggacacaacccctacctcgcc 263 || |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 223 caaacggtcaacaaccaccccaacgccggatggacggctggacacaacccctacctcgcg 282 Query: 264 aattacactattgagcaatttaagcatatgctgggagtgaaaccaacacctccaggttta 323 ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| Sbjct: 283 aattacactattgagcaatttaagcatatgctgggagtgaagccaacgcctccaggttta 342 Query: 324 ctggctggtgttcgaaccaaaactcatccaaggtcagagcagctcccaaaggagttcgac 383 | ||||| |||||| |||||||||||| |||| || |||||||||||||||| ||||||| Sbjct: 343 cgggctgctgttcgcaccaaaactcattcaagatcggagcagctcccaaaggtgttcgac 402 Query: 384 gccaggtcgaaatggtccggttgcagcacaattgggaaaatacttgatcaaggtcactgc 443 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 403 gccaggtcgaaatggtccggttgcagcacaattgggaaaatacttgatcaaggtcactgt 462 Query: 444 ggttcctgttgggcttttggagctgtgga 472 |||||||| ||||||||||| || ||||| Sbjct: 463 ggttcctgctgggcttttggtgccgtgga 491
>emb|X66014.1|TACATHBB T.aestivum mRNA 2 for cathepsin B (2077) Length = 1216 Score = 196 bits (99), Expect = 6e-47 Identities = 162/183 (88%) Strand = Plus / Plus Query: 171 cattccctaggaatcatccagaaaggcatcatacagacggtcaacaaccatcccaacgcc 230 ||||||||||||||||||||||| | |||||| |||||||||||||| |||||||| ||| Sbjct: 152 cattccctaggaatcatccagaaggacatcattcagacggtcaacaagcatcccaatgcc 211 Query: 231 ggatggacggctggacacaacccctacctcgccaattacactattgagcaatttaagcat 290 || |||||||||||||||||||||||| | || || ||||||||||||||||| |||||| Sbjct: 212 gggtggacggctggacacaacccctactttgcaaactacactattgagcaattcaagcat 271 Query: 291 atgctgggagtgaaaccaacacctccaggtttactggctggtgttcgaaccaaaactcat 350 || ||||||||||| ||||| ||||| ||||| || |||||||||| | ||||| |||| Sbjct: 272 atcctgggagtgaagccaacgcctccgggtttgctcgctggtgttccgatcaaaattcat 331 Query: 351 cca 353 ||| Sbjct: 332 cca 334 Score = 180 bits (91), Expect = 4e-42 Identities = 178/207 (85%) Strand = Plus / Plus Query: 394 aatggtccggttgcagcacaattgggaaaatacttgatcaaggtcactgcggttcctgtt 453 |||||||| ||||||||||||||||||| |||||||||||||||||||| ||| |||||| Sbjct: 372 aatggtccagttgcagcacaattgggaacatacttgatcaaggtcactgtggtgcctgtt 431 Query: 454 gggcttttggagctgtggagtgtctgcaagatcgtttctgcatccatcacaacatgaaca 513 |||| |||| || ||||| ||| || ||||||||||| || |||| |||||||| | Sbjct: 432 gggcctttgctgccgtggaagctctccaggatcgtttctgtattcatctcaacatgagcg 491 Query: 514 tttcactttctgccaatgacctagtggcttgctgtgggtttatgtgtggtgatggttgtg 573 | || ||||| | |||||||||| ||||||||||||| ||| |||||||| |||||| Sbjct: 492 tctccctttcggtcaatgacctactggcttgctgtggttttctgtgtggtagcggttgta 551 Query: 574 atggaggatatcctatcagcgcatggc 600 ||||||||||||||||||||||||||| Sbjct: 552 atggaggatatcctatcagcgcatggc 578
>gb|BT016464.1| Zea mays clone Contig297 mRNA sequence Length = 1136 Score = 180 bits (91), Expect = 4e-42 Identities = 169/195 (86%) Strand = Plus / Plus Query: 395 atggtccggttgcagcacaattgggaaaatacttgatcaaggtcactgcggttcctgttg 454 ||||||| ||||||||||||||||||| |||||||||||||||||||| || || ||||| Sbjct: 164 atggtcccgttgcagcacaattgggaacatacttgatcaaggtcactgtggctcttgttg 223 Query: 455 ggcttttggagctgtggagtgtctgcaagatcgtttctgcatccatcacaacatgaacat 514 ||||||||| ||||||||||| || || || ||||| ||||| || | |||||||| ||| Sbjct: 224 ggcttttggtgctgtggagtgcctccaggaccgtttttgcattcacctcaacatgagcat 283 Query: 515 ttcactttctgccaatgacctagtggcttgctgtgggtttatgtgtggtgatggttgtga 574 || |||||| | |||||||||| |||| ||||| || |||||||| || ||||| ||||| Sbjct: 284 tttactttcagtcaatgacctactggcatgctgcggttttatgtgcggcgatgggtgtga 343 Query: 575 tggaggatatcctat 589 |||||| |||||||| Sbjct: 344 tggaggctatcctat 358 Score = 40.1 bits (20), Expect = 8.2 Identities = 32/36 (88%) Strand = Plus / Plus Query: 278 gcaatttaagcatatgctgggagtgaaaccaacacc 313 |||||||||||| || || |||||||||||| |||| Sbjct: 47 gcaatttaagcacatacttggagtgaaaccagcacc 82
>dbj|AK101093.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033024N03, full insert sequence Length = 1437 Score = 180 bits (91), Expect = 4e-42 Identities = 166/191 (86%) Strand = Plus / Plus Query: 410 cacaattgggaaaatacttgatcaaggtcactgcggttcctgttgggcttttggagctgt 469 ||||||||||| ||||||||||| |||||||| || || |||||||| ||||| ||||| Sbjct: 540 cacaattgggaccatacttgatcagggtcactgtggctcgtgttgggcatttggtgctgt 599 Query: 470 ggagtgtctgcaagatcgtttctgcatccatcacaacatgaacatttcactttctgccaa 529 ||||||||| || |||||||||||||| ||| ||||||||||||||| || |||| ||| Sbjct: 600 ggagtgtctccaggatcgtttctgcattcatttcaacatgaacatttcgctatctgtcaa 659 Query: 530 tgacctagtggcttgctgtgggtttatgtgtggtgatggttgtgatggaggatatcctat 589 |||||||||||| ||||| || || ||||| || ||||||||||||||||| |||||||| Sbjct: 660 tgacctagtggcatgctgcggtttcatgtgcggcgatggttgtgatggaggctatcctat 719 Query: 590 cagcgcatggc 600 || ||||||| Sbjct: 720 catggcatggc 730 Score = 42.1 bits (21), Expect = 2.1 Identities = 105/133 (78%) Strand = Plus / Plus Query: 181 gaatcatccagaaaggcatcatacagacggtcaacaaccatcccaacgccggatggacgg 240 ||||||||||| | | ||||||| || | ||||||| |||||||| || || ||||||| Sbjct: 311 gaatcatccaggacgacatcataaaggcaatcaacaagcatcccaatgctggctggacgg 370 Query: 241 ctggacacaacccctacctcgccaattacactattgagcaatttaagcatatgctgggag 300 ||| || || || ||| | || || || |||| || |||||| || ||||| || |||| Sbjct: 371 ctgcacggaatccatactttgcaaactatactactgcgcaattcaaacatatccttggag 430 Query: 301 tgaaaccaacacc 313 |||| |||||||| Sbjct: 431 tgaagccaacacc 443
>dbj|AK100225.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023047M19, full insert sequence Length = 1436 Score = 180 bits (91), Expect = 4e-42 Identities = 166/191 (86%) Strand = Plus / Plus Query: 410 cacaattgggaaaatacttgatcaaggtcactgcggttcctgttgggcttttggagctgt 469 ||||||||||| ||||||||||| |||||||| || || |||||||| ||||| ||||| Sbjct: 538 cacaattgggaccatacttgatcagggtcactgtggctcgtgttgggcatttggtgctgt 597 Query: 470 ggagtgtctgcaagatcgtttctgcatccatcacaacatgaacatttcactttctgccaa 529 ||||||||| || |||||||||||||| ||| ||||||||||||||| || |||| ||| Sbjct: 598 ggagtgtctccaggatcgtttctgcattcatttcaacatgaacatttcgctatctgtcaa 657 Query: 530 tgacctagtggcttgctgtgggtttatgtgtggtgatggttgtgatggaggatatcctat 589 |||||||||||| ||||| || || ||||| || ||||||||||||||||| |||||||| Sbjct: 658 tgacctagtggcatgctgcggtttcatgtgcggcgatggttgtgatggaggctatcctat 717 Query: 590 cagcgcatggc 600 || ||||||| Sbjct: 718 catggcatggc 728 Score = 42.1 bits (21), Expect = 2.1 Identities = 105/133 (78%) Strand = Plus / Plus Query: 181 gaatcatccagaaaggcatcatacagacggtcaacaaccatcccaacgccggatggacgg 240 ||||||||||| | | ||||||| || | ||||||| |||||||| || || ||||||| Sbjct: 309 gaatcatccaggacgacatcataaaggcaatcaacaagcatcccaatgctggctggacgg 368 Query: 241 ctggacacaacccctacctcgccaattacactattgagcaatttaagcatatgctgggag 300 ||| || || || ||| | || || || |||| || |||||| || ||||| || |||| Sbjct: 369 ctgcacggaatccatactttgcaaactatactactgcgcaattcaaacatatccttggag 428 Query: 301 tgaaaccaacacc 313 |||| |||||||| Sbjct: 429 tgaagccaacacc 441
>dbj|AK068459.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013151C17, full insert sequence Length = 3464 Score = 180 bits (91), Expect = 4e-42 Identities = 166/191 (86%) Strand = Plus / Plus Query: 410 cacaattgggaaaatacttgatcaaggtcactgcggttcctgttgggcttttggagctgt 469 ||||||||||| ||||||||||| |||||||| || || |||||||| ||||| ||||| Sbjct: 669 cacaattgggaccatacttgatcagggtcactgtggctcgtgttgggcatttggtgctgt 728 Query: 470 ggagtgtctgcaagatcgtttctgcatccatcacaacatgaacatttcactttctgccaa 529 ||||||||| || |||||||||||||| ||| ||||||||||||||| || |||| ||| Sbjct: 729 ggagtgtctccaggatcgtttctgcattcatttcaacatgaacatttcgctatctgtcaa 788 Query: 530 tgacctagtggcttgctgtgggtttatgtgtggtgatggttgtgatggaggatatcctat 589 |||||||||||| ||||| || || ||||| || ||||||||||||||||| |||||||| Sbjct: 789 tgacctagtggcatgctgcggtttcatgtgcggcgatggttgtgatggaggctatcctat 848 Query: 590 cagcgcatggc 600 || ||||||| Sbjct: 849 catggcatggc 859
>dbj|AK064820.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000E23, full insert sequence Length = 1369 Score = 180 bits (91), Expect = 4e-42 Identities = 166/191 (86%) Strand = Plus / Plus Query: 410 cacaattgggaaaatacttgatcaaggtcactgcggttcctgttgggcttttggagctgt 469 ||||||||||| ||||||||||| |||||||| || || |||||||| ||||| ||||| Sbjct: 471 cacaattgggaccatacttgatcagggtcactgtggctcgtgttgggcatttggtgctgt 530 Query: 470 ggagtgtctgcaagatcgtttctgcatccatcacaacatgaacatttcactttctgccaa 529 ||||||||| || |||||||||||||| ||| ||||||||||||||| || |||| ||| Sbjct: 531 ggagtgtctccaggatcgtttctgcattcatttcaacatgaacatttcgctatctgtcaa 590 Query: 530 tgacctagtggcttgctgtgggtttatgtgtggtgatggttgtgatggaggatatcctat 589 |||||||||||| ||||| || || ||||| || ||||||||||||||||| |||||||| Sbjct: 591 tgacctagtggcatgctgcggtttcatgtgcggcgatggttgtgatggaggctatcctat 650 Query: 590 cagcgcatggc 600 || ||||||| Sbjct: 651 catggcatggc 661 Score = 42.1 bits (21), Expect = 2.1 Identities = 105/133 (78%) Strand = Plus / Plus Query: 181 gaatcatccagaaaggcatcatacagacggtcaacaaccatcccaacgccggatggacgg 240 ||||||||||| | | ||||||| || | ||||||| |||||||| || || ||||||| Sbjct: 242 gaatcatccaggacgacatcataaaggcaatcaacaagcatcccaatgctggctggacgg 301 Query: 241 ctggacacaacccctacctcgccaattacactattgagcaatttaagcatatgctgggag 300 ||| || || || ||| | || || || |||| || |||||| || ||||| || |||| Sbjct: 302 ctgcacggaatccatactttgcaaactatactactgcgcaattcaaacatatccttggag 361 Query: 301 tgaaaccaacacc 313 |||| |||||||| Sbjct: 362 tgaagccaacacc 374
>dbj|AK059697.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-C04, full insert sequence Length = 1565 Score = 180 bits (91), Expect = 4e-42 Identities = 166/191 (86%) Strand = Plus / Plus Query: 410 cacaattgggaaaatacttgatcaaggtcactgcggttcctgttgggcttttggagctgt 469 ||||||||||| ||||||||||| |||||||| || || |||||||| ||||| ||||| Sbjct: 470 cacaattgggaccatacttgatcagggtcactgtggctcgtgttgggcatttggtgctgt 529 Query: 470 ggagtgtctgcaagatcgtttctgcatccatcacaacatgaacatttcactttctgccaa 529 ||||||||| || |||||||||||||| ||| ||||||||||||||| || |||| ||| Sbjct: 530 ggagtgtctccaggatcgtttctgcattcatttcaacatgaacatttcgctatctgtcaa 589 Query: 530 tgacctagtggcttgctgtgggtttatgtgtggtgatggttgtgatggaggatatcctat 589 |||||||||||| ||||| || || ||||| || ||||||||||||||||| |||||||| Sbjct: 590 tgacctagtggcatgctgcggtttcatgtgcggcgatggttgtgatggaggctatcctat 649 Query: 590 cagcgcatggc 600 || ||||||| Sbjct: 650 catggcatggc 660 Score = 42.1 bits (21), Expect = 2.1 Identities = 105/133 (78%) Strand = Plus / Plus Query: 181 gaatcatccagaaaggcatcatacagacggtcaacaaccatcccaacgccggatggacgg 240 ||||||||||| | | ||||||| || | ||||||| |||||||| || || ||||||| Sbjct: 241 gaatcatccaggacgacatcataaaggcaatcaacaagcatcccaatgctggctggacgg 300 Query: 241 ctggacacaacccctacctcgccaattacactattgagcaatttaagcatatgctgggag 300 ||| || || || ||| | || || || |||| || |||||| || ||||| || |||| Sbjct: 301 ctgcacggaatccatactttgcaaactatactactgcgcaattcaaacatatccttggag 360 Query: 301 tgaaaccaacacc 313 |||| |||||||| Sbjct: 361 tgaagccaacacc 373
>gb|AY916493.1| Oryza sativa (japonica cultivar-group) cathepsin B-like cysteine protease mRNA, complete cds Length = 1475 Score = 180 bits (91), Expect = 4e-42 Identities = 166/191 (86%) Strand = Plus / Plus Query: 410 cacaattgggaaaatacttgatcaaggtcactgcggttcctgttgggcttttggagctgt 469 ||||||||||| ||||||||||| |||||||| || || |||||||| ||||| ||||| Sbjct: 492 cacaattgggaccatacttgatcagggtcactgtggctcgtgttgggcatttggtgctgt 551 Query: 470 ggagtgtctgcaagatcgtttctgcatccatcacaacatgaacatttcactttctgccaa 529 ||||||||| || |||||||||||||| ||| ||||||||||||||| || |||| ||| Sbjct: 552 ggagtgtctccaggatcgtttctgcattcatttcaacatgaacatttcgctatctgtcaa 611 Query: 530 tgacctagtggcttgctgtgggtttatgtgtggtgatggttgtgatggaggatatcctat 589 |||||||||||| ||||| || || ||||| || ||||||||||||||||| |||||||| Sbjct: 612 tgacctagtggcatgctgcggtttcatgtgcggcgatggttgtgatggaggctatcctat 671 Query: 590 cagcgcatggc 600 || ||||||| Sbjct: 672 catggcatggc 682 Score = 42.1 bits (21), Expect = 2.1 Identities = 105/133 (78%) Strand = Plus / Plus Query: 181 gaatcatccagaaaggcatcatacagacggtcaacaaccatcccaacgccggatggacgg 240 ||||||||||| | | ||||||| || | ||||||| |||||||| || || ||||||| Sbjct: 263 gaatcatccaggacgacatcataaaggcaatcaacaagcatcccaatgctggctggacgg 322 Query: 241 ctggacacaacccctacctcgccaattacactattgagcaatttaagcatatgctgggag 300 ||| || || || ||| | || || || |||| || |||||| || ||||| || |||| Sbjct: 323 ctgcacggaatccatactttgcaaactatactactgcgcaattcaaacatatccttggag 382 Query: 301 tgaaaccaacacc 313 |||| |||||||| Sbjct: 383 tgaagccaacacc 395
>emb|X66013.1|TACATHBG T.aestivum gene for cathepsin B (Al16) Length = 4792 Score = 91.7 bits (46), Expect = 3e-15 Identities = 67/74 (90%) Strand = Plus / Plus Query: 527 caatgacctagtggcttgctgtgggtttatgtgtggtgatggttgtgatggaggatatcc 586 |||||||||| ||||||||||||| ||| |||||||| |||||| ||||||||||||| Sbjct: 2484 caatgacctactggcttgctgtggttttctgtgtggtagcggttgtaatggaggatatcc 2543 Query: 587 tatcagcgcatggc 600 |||||||||||||| Sbjct: 2544 tatcagcgcatggc 2557 Score = 89.7 bits (45), Expect = 1e-14 Identities = 57/61 (93%) Strand = Plus / Plus Query: 197 catcatacagacggtcaacaaccatcccaacgccggatggacggctggacacaaccccta 256 |||||| |||||||||||||| |||||||| ||||| ||||||||||||||||||||||| Sbjct: 1709 catcattcagacggtcaacaagcatcccaatgccgggtggacggctggacacaaccccta 1768 Query: 257 c 257 | Sbjct: 1769 c 1769 Score = 73.8 bits (37), Expect = 6e-10 Identities = 70/81 (86%) Strand = Plus / Plus Query: 273 attgagcaatttaagcatatgctgggagtgaaaccaacacctccaggtttactggctggt 332 ||||||||||| |||||||| ||||||||||| ||||| ||||| ||||| || |||||| Sbjct: 1885 attgagcaattcaagcatatcctgggagtgaagccaacgcctccgggtttgctcgctggt 1944 Query: 333 gttcgaaccaaaactcatcca 353 |||| | ||||| ||||||| Sbjct: 1945 gttccgatcaaaattcatcca 1965 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 394 aatggtccggttgcagcacaattgggaaaatacttg 429 |||||||| ||||||||||||||||||| ||||||| Sbjct: 2003 aatggtccagttgcagcacaattgggaacatacttg 2038 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 171 cattccctaggaatcatccag 191 ||||||||||||||||||||| Sbjct: 1592 cattccctaggaatcatccag 1612
>gb|AC132490.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0570A02, complete sequence Length = 146541 Score = 87.7 bits (44), Expect = 4e-14 Identities = 80/92 (86%) Strand = Plus / Plus Query: 509 gaacatttcactttctgccaatgacctagtggcttgctgtgggtttatgtgtggtgatgg 568 ||||||||| || |||| ||||||||||||||| ||||| || || ||||| || ||||| Sbjct: 110408 gaacatttcgctatctgtcaatgacctagtggcatgctgcggtttcatgtgcggcgatgg 110467 Query: 569 ttgtgatggaggatatcctatcagcgcatggc 600 |||||||||||| |||||||||| ||||||| Sbjct: 110468 ttgtgatggaggctatcctatcatggcatggc 110499 Score = 69.9 bits (35), Expect = 9e-09 Identities = 65/75 (86%) Strand = Plus / Plus Query: 435 ggtcactgcggttcctgttgggcttttggagctgtggagtgtctgcaagatcgtttctgc 494 |||||||| || || |||||||| ||||| |||||||||||||| || |||||||||||| Sbjct: 110229 ggtcactgtggctcgtgttgggcatttggtgctgtggagtgtctccaggatcgtttctgc 110288 Query: 495 atccatcacaacatg 509 || ||| ||||||| Sbjct: 110289 attcatttcaacatg 110303
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 87.7 bits (44), Expect = 4e-14 Identities = 80/92 (86%) Strand = Plus / Plus Query: 509 gaacatttcactttctgccaatgacctagtggcttgctgtgggtttatgtgtggtgatgg 568 ||||||||| || |||| ||||||||||||||| ||||| || || ||||| || ||||| Sbjct: 14030331 gaacatttcgctatctgtcaatgacctagtggcatgctgcggtttcatgtgcggcgatgg 14030390 Query: 569 ttgtgatggaggatatcctatcagcgcatggc 600 |||||||||||| |||||||||| ||||||| Sbjct: 14030391 ttgtgatggaggctatcctatcatggcatggc 14030422 Score = 69.9 bits (35), Expect = 9e-09 Identities = 65/75 (86%) Strand = Plus / Plus Query: 435 ggtcactgcggttcctgttgggcttttggagctgtggagtgtctgcaagatcgtttctgc 494 |||||||| || || |||||||| ||||| |||||||||||||| || |||||||||||| Sbjct: 14030152 ggtcactgtggctcgtgttgggcatttggtgctgtggagtgtctccaggatcgtttctgc 14030211 Query: 495 atccatcacaacatg 509 || ||| ||||||| Sbjct: 14030212 attcatttcaacatg 14030226 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 42 ctcctccctcccaccgtgcg 61 |||||||||||||||||||| Sbjct: 22308765 ctcctccctcccaccgtgcg 22308784
>gb|AY112465.1| Zea mays CL31697_1 mRNA sequence Length = 1472 Score = 79.8 bits (40), Expect = 1e-11 Identities = 46/48 (95%) Strand = Plus / Minus Query: 395 atggtccggttgcagcacaattgggaaaatacttgatcaaggtcactg 442 ||||||| ||||||||||||||||||| |||||||||||||||||||| Sbjct: 925 atggtcccgttgcagcacaattgggaacatacttgatcaaggtcactg 878 Score = 77.8 bits (39), Expect = 4e-11 Identities = 75/87 (86%) Strand = Plus / Minus Query: 503 caacatgaacatttcactttctgccaatgacctagtggcttgctgtgggtttatgtgtgg 562 |||||||| ||||| |||||| | |||||||||| |||| ||||| || |||||||| || Sbjct: 817 caacatgagcattttactttcagtcaatgacctactggcatgctgcggttttatgtgcgg 758 Query: 563 tgatggttgtgatggaggatatcctat 589 ||||| ||||||||||| |||||||| Sbjct: 757 cgatgggtgtgatggaggctatcctat 731 Score = 42.1 bits (21), Expect = 2.1 Identities = 39/45 (86%) Strand = Plus / Minus Query: 181 gaatcatccagaaaggcatcatacagacggtcaacaaccatccca 225 ||||||||||| | | |||||| |||| |||||||||||||||| Sbjct: 1139 gaatcatccaggaggacatcatcgagacagtcaacaaccatccca 1095 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Minus Query: 273 attgagcaatttaagcatatgctgggagtgaaaccaacacc 313 |||| |||||||||||| || || |||||||||||| |||| Sbjct: 1047 attgcgcaatttaagcacatacttggagtgaaaccagcacc 1007
>gb|AY450641.1| Solanum tuberosum cathepsin B-like cysteine proteinase mRNA, complete cds Length = 1262 Score = 71.9 bits (36), Expect = 2e-09 Identities = 81/96 (84%) Strand = Plus / Plus Query: 405 tgcagcacaattgggaaaatacttgatcaaggtcactgcggttcctgttgggcttttgga 464 |||||||||||||| ||||| || ||||| || || |||||||| |||||||||||||| Sbjct: 337 tgcagcacaattggaaaaattctggatcagggacattgcggttcttgttgggcttttggt 396 Query: 465 gctgtggagtgtctgcaagatcgtttctgcatccat 500 ||||| |||| ||| ||||||||||| |||||| Sbjct: 397 gctgttgagtcgctgtctgatcgtttctgtatccat 432 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 566 tggttgtgatggaggatatcctat 589 |||||||||||| ||||||||||| Sbjct: 498 tggttgtgatggtggatatcctat 521
>gb|AY450638.1| Solanum tuberosum clone plbr2 cathepsin B-like cysteine proteinase mRNA, partial cds Length = 655 Score = 71.9 bits (36), Expect = 2e-09 Identities = 81/96 (84%) Strand = Plus / Plus Query: 405 tgcagcacaattgggaaaatacttgatcaaggtcactgcggttcctgttgggcttttgga 464 |||||||||||||| ||||| || ||||| || || |||||||| |||||||||||||| Sbjct: 332 tgcagcacaattggaaaaattctggatcagggacattgcggttcttgttgggcttttggt 391 Query: 465 gctgtggagtgtctgcaagatcgtttctgcatccat 500 ||||| |||| ||| ||||||||||| |||||| Sbjct: 392 gctgttgagtcgctgtctgatcgtttctgtatccat 427 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 566 tggttgtgatggaggatatcctat 589 |||||||||||| ||||||||||| Sbjct: 493 tggttgtgatggtggatatcctat 516
>gb|BT014624.1| Lycopersicon esculentum clone 134127R, mRNA sequence Length = 1263 Score = 63.9 bits (32), Expect = 6e-07 Identities = 80/96 (83%) Strand = Plus / Plus Query: 405 tgcagcacaattgggaaaatacttgatcaaggtcactgcggttcctgttgggcttttgga 464 |||||||||||||| | ||| || ||||| || || |||||||| |||||||||||||| Sbjct: 376 tgcagcacaattggaagaattctagatcagggacattgcggttcttgttgggcttttggt 435 Query: 465 gctgtggagtgtctgcaagatcgtttctgcatccat 500 ||||| |||| ||| ||||||||||| |||||| Sbjct: 436 gctgttgagtcgctgtctgatcgtttctgtatccat 471 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 566 tggttgtgatggaggatatcctat 589 |||||||||||| ||||||||||| Sbjct: 537 tggttgtgatggtggatatcctat 560
>gb|DQ492287.1| Nicotiana benthamiana cathepsin B (CathB) mRNA, complete cds Length = 1353 Score = 61.9 bits (31), Expect = 2e-06 Identities = 142/179 (79%) Strand = Plus / Plus Query: 408 agcacaattgggaaaatacttgatcaaggtcactgcggttcctgttgggcttttggagct 467 ||||| ||||||| ||| |||||||| || ||||| ||||| |||||||||||||| ||| Sbjct: 343 agcactattgggagaattcttgatcagggacactgtggttcttgttgggcttttggtgct 402 Query: 468 gtggagtgtctgcaagatcgtttctgcatccatcacaacatgaacatttcactttctgcc 527 || |||| ||| ||||||||||| || ||| | | |||| || || || || || Sbjct: 403 gttgagtcactgtctgatcgtttctgtattcattatggcttgaatatctctctgtcagca 462 Query: 528 aatgacctagtggcttgctgtgggtttatgtgtggtgatggttgtgatggaggatatcc 586 ||||| || | || |||||||| ||| | ||||| |||||||||||||| |||||||| Sbjct: 463 aatgatctcttagcatgctgtggctttttatgtggagatggttgtgatggtggatatcc 521
>emb|X81995.1|NRCATHB N.rustica mRNA for cathepsin B-like cysteine proteinase Length = 1331 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Plus Query: 408 agcacaattgggaaaatacttgatcaaggtcactgcggttcctgttgggcttttggagct 467 ||||| ||||||| ||| |||||||| || ||||| ||||| |||||||||||||| ||| Sbjct: 355 agcactattgggagaattcttgatcagggacactgtggttcttgttgggcttttggtgct 414 Query: 468 gtggagt 474 || |||| Sbjct: 415 gttgagt 421 Score = 48.1 bits (24), Expect = 0.034 Identities = 39/44 (88%) Strand = Plus / Plus Query: 543 tgctgtgggtttatgtgtggtgatggttgtgatggaggatatcc 586 |||||||| ||| | ||||| |||||||||||||| |||||||| Sbjct: 490 tgctgtggctttttatgtggggatggttgtgatggtggatatcc 533
>ref|XM_961657.1| PREDICTED: Tribolium castaneum similar to CG10992-PA (LOC655148), mRNA Length = 1072 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Plus Query: 439 actgcggttcctgttgggcttttgg 463 ||||||||||||||||||||||||| Sbjct: 324 actgcggttcctgttgggcttttgg 348
>ref|XM_849967.1| PREDICTED: Canis familiaris similar to Cathepsin L2 precursor (Cathepsin V) (Cathepsin U) (LOC612231), mRNA Length = 870 Score = 48.1 bits (24), Expect = 0.034 Identities = 30/32 (93%) Strand = Plus / Plus Query: 430 atcaaggtcactgcggttcctgttgggctttt 461 ||||||||||||| ||||| |||||||||||| Sbjct: 380 atcaaggtcactgtggttcttgttgggctttt 411
>emb|X66116.1|TAPCATHB T.aestivum promoter sequence of cathepsin B-like gene Length = 483 Score = 48.1 bits (24), Expect = 0.034 Identities = 24/24 (100%) Strand = Plus / Plus Query: 60 cgtcgccgatcgaggacgaagatg 83 |||||||||||||||||||||||| Sbjct: 460 cgtcgccgatcgaggacgaagatg 483
>gb|AF283476.1|AF283476 Ipomoea batatas cathepsin B-like cysteine proteinase gene, complete cds Length = 3334 Score = 48.1 bits (24), Expect = 0.034 Identities = 57/68 (83%) Strand = Plus / Plus Query: 522 tctgccaatgacctagtggcttgctgtgggtttatgtgtggtgatggttgtgatggagga 581 |||| ||||||||| | || |||||||| ||| |||| ||||| ||||||||||| || Sbjct: 1926 tctgtcaatgacctcttagcgtgctgtggctttttgtgcggtgaaggttgtgatggtggt 1985 Query: 582 tatcctat 589 |||||||| Sbjct: 1986 tatcctat 1993
>gb|AF101239.1|AF101239 Ipomoea batatas cathepsin B-like cysteine proteinase (CathB) mRNA, complete cds Length = 1248 Score = 48.1 bits (24), Expect = 0.034 Identities = 57/68 (83%) Strand = Plus / Plus Query: 522 tctgccaatgacctagtggcttgctgtgggtttatgtgtggtgatggttgtgatggagga 581 |||| ||||||||| | || |||||||| ||| |||| ||||| ||||||||||| || Sbjct: 470 tctgtcaatgacctcttagcgtgctgtggctttttgtgcggtgaaggttgtgatggtggt 529 Query: 582 tatcctat 589 |||||||| Sbjct: 530 tatcctat 537 Score = 44.1 bits (22), Expect = 0.53 Identities = 34/38 (89%) Strand = Plus / Plus Query: 426 cttgatcaaggtcactgcggttcctgttgggcttttgg 463 |||||||| || ||||||||||| || ||||||||||| Sbjct: 374 cttgatcagggacactgcggttcttgctgggcttttgg 411
>emb|AL135793.13| Human DNA sequence from clone RP11-296H2 on chromosome 10 Contains the 3' end of the TACC2 gene for transforming, acidic coiled-coil containing protein 2 (AZU-1), the gene for a novel protein (FLJ25359) and two CpG islands, complete sequence Length = 213861 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 31 ccgcttgcttcctcctccctccc 53 ||||||||||||||||||||||| Sbjct: 193402 ccgcttgcttcctcctccctccc 193380
>ref|XM_969178.1| PREDICTED: Tribolium castaneum similar to cathepsin B preproprotein (LOC663117), mRNA Length = 1008 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 450 tgttgggcttttggagctgtgga 472 ||||||||||||||||||||||| Sbjct: 337 tgttgggcttttggagctgtgga 359
>emb|BX842243.1| Homo sapiens chromosome 10 clone RP11-436O19, partial sequence Length = 38906 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 31 ccgcttgcttcctcctccctccc 53 ||||||||||||||||||||||| Sbjct: 21576 ccgcttgcttcctcctccctccc 21598
>gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome Length = 3814139 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Plus Query: 102 ctggcgctgctcgtcgtcctct 123 |||||||||||||||||||||| Sbjct: 3262884 ctggcgctgctcgtcgtcctct 3262905
>emb|BX032301.1|CNS08X35 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA48AE08 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 274 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Plus Query: 27 tcctccgcttgcttcctcctcc 48 |||||||||||||||||||||| Sbjct: 153 tcctccgcttgcttcctcctcc 174
>gb|AF239268.1|AF239268 Fasciola gigantica cathepsin L (cat-L1F) mRNA, partial cds Length = 660 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Plus Query: 439 actgcggttcctgttgggcttt 460 |||||||||||||||||||||| Sbjct: 62 actgcggttcctgttgggcttt 83
>dbj|D16823.1|SPESPCB S.peregrina mRNA for cathepsin B, complete cds Length = 1280 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 444 ggttcctgttgggcttttggagctgt 469 ||||| |||||||||||||||||||| Sbjct: 439 ggttcatgttgggcttttggagctgt 464
>gb|AY363262.1| Triatoma infestans cathepsin B-like proteinase (CatB1) mRNA, complete cds Length = 1142 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 441 tgcggttcctgttgggcttttggagctgt 469 |||||||| |||||||| ||||||||||| Sbjct: 351 tgcggttcttgttgggcatttggagctgt 379
>emb|AL663003.2|OSJN00203 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0032E06, complete sequence Length = 125196 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 29 ctccgcttgcttcctcctccctccc 53 |||||||| |||||||||||||||| Sbjct: 55220 ctccgcttccttcctcctccctccc 55196
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 29 ctccgcttgcttcctcctccctccc 53 |||||||| |||||||||||||||| Sbjct: 28564430 ctccgcttccttcctcctccctccc 28564406
>gb|AY553272.1| Triatoma vitticeps cathepsin B-like proteinase (CatB1) mRNA, complete cds Length = 1132 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 441 tgcggttcctgttgggcttttggagctgt 469 |||||||| |||||||| ||||||||||| Sbjct: 334 tgcggttcttgttgggcatttggagctgt 362
>gb|AY553271.1| Triatoma sordida cathepsin B-like proteinase (CatB1) mRNA, complete cds Length = 1129 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 441 tgcggttcctgttgggcttttggagctgt 469 |||||||| |||||||| ||||||||||| Sbjct: 349 tgcggttcttgttgggcatttggagctgt 377
>ref|XM_513780.1| PREDICTED: Pan troglodytes LOC457278 (LOC457278), mRNA Length = 914 Score = 40.1 bits (20), Expect = 8.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 430 atcaaggtcactgcggttcctgttgggctttt 461 |||| ||||| || |||||||||||||||||| Sbjct: 493 atcagggtcagtgtggttcctgttgggctttt 524
>gb|AC105770.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1362_D02, complete sequence Length = 131860 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 42 ctcctccctcccaccgtgcg 61 |||||||||||||||||||| Sbjct: 10400 ctcctccctcccaccgtgcg 10419
>gb|BC016058.1| Homo sapiens cathepsin K (pycnodysostosis), mRNA (cDNA clone MGC:23107 IMAGE:4860926), complete cds Length = 1699 Score = 40.1 bits (20), Expect = 8.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 430 atcaaggtcactgcggttcctgttgggctttt 461 |||| ||||| || |||||||||||||||||| Sbjct: 506 atcagggtcagtgtggttcctgttgggctttt 537
>ref|NM_000396.2| Homo sapiens cathepsin K (pycnodysostosis) (CTSK), mRNA Length = 1702 Score = 40.1 bits (20), Expect = 8.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 430 atcaaggtcactgcggttcctgttgggctttt 461 |||| ||||| || |||||||||||||||||| Sbjct: 519 atcagggtcagtgtggttcctgttgggctttt 550
>ref|NM_001032812.1| Macaca mulatta cathepsin K (CTSK), mRNA Length = 1029 Score = 40.1 bits (20), Expect = 8.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 430 atcaaggtcactgcggttcctgttgggctttt 461 |||| ||||| || |||||||||||||||||| Sbjct: 411 atcagggtcagtgtggttcctgttgggctttt 442
>gb|AC140053.4| Mus musculus BAC clone RP23-258J2 from chromosome 19, complete sequence Length = 186595 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 34 cttgcttcctcctccctccc 53 |||||||||||||||||||| Sbjct: 155528 cttgcttcctcctccctccc 155509
>gb|AC112144.4| Mus musculus BAC clone RP23-32B4 from 19, complete sequence Length = 216521 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 cttgcttcctcctccctccc 53 |||||||||||||||||||| Sbjct: 142771 cttgcttcctcctccctccc 142790
>emb|AL109919.18|HSDJ258B3 Human DNA sequence from clone RP1-258B3 on chromosome 6q16.1-16.3 Contains part of the GRIK2 gene for glutamate receptor ionotropic kainate 2, complete sequence Length = 147603 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 557 gtgtggtgatggttgtgatg 576 |||||||||||||||||||| Sbjct: 51980 gtgtggtgatggttgtgatg 51961
>emb|AL035446.4|HS460G2 Human DNA sequence from clone RP3-460G2 on chromosome 6q24.1-24.3 Contains a novel gene and part of a 40s ribosomal protein S3a (v-fos transformation effector protein 1) (RPS3A)(FTE1) pseudogene, complete sequence Length = 102552 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 gaagatggggagcggcctgc 96 |||||||||||||||||||| Sbjct: 86183 gaagatggggagcggcctgc 86202
>emb|X82153.1|HSOC2RNA H.sapiens mRNA for cathepsin O Length = 1669 Score = 40.1 bits (20), Expect = 8.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 430 atcaaggtcactgcggttcctgttgggctttt 461 |||| ||||| || |||||||||||||||||| Sbjct: 524 atcagggtcagtgtggttcctgttgggctttt 555
>emb|CR541719.1| Homo sapiens full open reading frame cDNA clone RZPDo834E1237D for gene CTSK, cathepsin K (pycnodysostosis); complete cds, without stopcodon Length = 987 Score = 40.1 bits (20), Expect = 8.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 430 atcaaggtcactgcggttcctgttgggctttt 461 |||| ||||| || |||||||||||||||||| Sbjct: 395 atcagggtcagtgtggttcctgttgggctttt 426
>emb|CR541675.1| Homo sapiens full open reading frame cDNA clone RZPDo834C0328D for gene CTSK, cathepsin K (pycnodysostosis); complete cds, incl. stopcodon Length = 990 Score = 40.1 bits (20), Expect = 8.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 430 atcaaggtcactgcggttcctgttgggctttt 461 |||| ||||| || |||||||||||||||||| Sbjct: 395 atcagggtcagtgtggttcctgttgggctttt 426
>emb|AJ583509.1| Diabrotica virgifera virgifera mRNA for cathepsin B-like proteinase, clone DvRS6 Length = 1230 Score = 40.1 bits (20), Expect = 8.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 441 tgcggttcctgttgggcttttggagctgtgga 472 ||||| || ||||||||||||||||| ||||| Sbjct: 348 tgcgggtcatgttgggcttttggagcagtgga 379
>gb|AC009320.7| Homo sapiens 12 BAC RP11-310I24 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 57166 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 505 acatgaacatttcactttct 524 |||||||||||||||||||| Sbjct: 44278 acatgaacatttcactttct 44259
>emb|BX470140.10| Zebrafish DNA sequence from clone CH211-238E6 in linkage group 4 Contains the gene for a novel protein similar to vertebrate microphthalmia-associated transcription factor (MITF), six novel genes and two CpG islands, complete sequence Length = 148136 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 546 tgtgggtttatgtgtggtgatggt 569 ||||||||||| |||||||||||| Sbjct: 6032 tgtgggtttatatgtggtgatggt 6055 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 546 tgtgggtttatgtgtggtgatggt 569 ||||||||||| |||||||||||| Sbjct: 1589 tgtgggtttatatgtggtgatggt 1612
>gb|AF453501.1| Actinosynnema pretiosum subsp. auranticum maytansinoid antitumor agent ansamitocin biosynthetic gene cluster I, partial sequence Length = 82746 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 97 tcccgctggcgctgctcgtc 116 |||||||||||||||||||| Sbjct: 43968 tcccgctggcgctgctcgtc 43949
>emb|CR626559.1| full-length cDNA clone CS0DI024YJ12 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1658 Score = 40.1 bits (20), Expect = 8.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 430 atcaaggtcactgcggttcctgttgggctttt 461 |||| ||||| || |||||||||||||||||| Sbjct: 490 atcagggtcagtgtggttcctgttgggctttt 521
>emb|CR626142.1| full-length cDNA clone CS0DN002YD24 of Adult brain of Homo sapiens (human) Length = 1619 Score = 40.1 bits (20), Expect = 8.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 430 atcaaggtcactgcggttcctgttgggctttt 461 |||| ||||| || |||||||||||||||||| Sbjct: 500 atcagggtcagtgtggttcctgttgggctttt 531
>emb|CR624019.1| full-length cDNA clone CS0DN002YH21 of Adult brain of Homo sapiens (human) Length = 1563 Score = 40.1 bits (20), Expect = 8.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 430 atcaaggtcactgcggttcctgttgggctttt 461 |||| ||||| || |||||||||||||||||| Sbjct: 422 atcagggtcagtgtggttcctgttgggctttt 453
>emb|CR614321.1| full-length cDNA clone CS0DI069YM12 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1527 Score = 40.1 bits (20), Expect = 8.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 430 atcaaggtcactgcggttcctgttgggctttt 461 |||| ||||| || |||||||||||||||||| Sbjct: 424 atcagggtcagtgtggttcctgttgggctttt 455
>emb|CR612623.1| full-length cDNA clone CS0DI018YG15 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1583 Score = 40.1 bits (20), Expect = 8.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 430 atcaaggtcactgcggttcctgttgggctttt 461 |||| ||||| || |||||||||||||||||| Sbjct: 425 atcagggtcagtgtggttcctgttgggctttt 456
>emb|CR612492.1| full-length cDNA clone CS0DI033YH19 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1577 Score = 40.1 bits (20), Expect = 8.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 430 atcaaggtcactgcggttcctgttgggctttt 461 |||| ||||| || |||||||||||||||||| Sbjct: 425 atcagggtcagtgtggttcctgttgggctttt 456
>emb|CR606929.1| full-length cDNA clone CS0DN002YF20 of Adult brain of Homo sapiens (human) Length = 1626 Score = 40.1 bits (20), Expect = 8.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 430 atcaaggtcactgcggttcctgttgggctttt 461 |||| ||||| || |||||||||||||||||| Sbjct: 492 atcagggtcagtgtggttcctgttgggctttt 523
>emb|CR601270.1| full-length cDNA clone CS0DE008YM10 of Placenta of Homo sapiens (human) Length = 1565 Score = 40.1 bits (20), Expect = 8.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 430 atcaaggtcactgcggttcctgttgggctttt 461 |||| ||||| || |||||||||||||||||| Sbjct: 425 atcagggtcagtgtggttcctgttgggctttt 456
>emb|CR598542.1| full-length cDNA clone CS0DN002YO18 of Adult brain of Homo sapiens (human) Length = 1577 Score = 40.1 bits (20), Expect = 8.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 430 atcaaggtcactgcggttcctgttgggctttt 461 |||| ||||| || |||||||||||||||||| Sbjct: 425 atcagggtcagtgtggttcctgttgggctttt 456
>emb|CR594213.1| full-length cDNA clone CS0DI009YN05 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1579 Score = 40.1 bits (20), Expect = 8.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 430 atcaaggtcactgcggttcctgttgggctttt 461 |||| ||||| || |||||||||||||||||| Sbjct: 433 atcagggtcagtgtggttcctgttgggctttt 464
>gb|AF359422.1| Nicotiana tabacum cathepsin B-like cysteine proteinase gene, partial cds Length = 731 Score = 40.1 bits (20), Expect = 8.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 438 cactgcggttcctgttgggcttttggagctgt 469 ||||| ||||| |||||||||||||| ||||| Sbjct: 520 cactgtggttcttgttgggcttttggtgctgt 551
>gb|AE003849.1| Xylella fastidiosa 9a5c, complete genome Length = 2679306 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 402 ggttgcagcacaattgggaa 421 |||||||||||||||||||| Sbjct: 546761 ggttgcagcacaattgggaa 546742
>gb|S79895.1| OC2=cathepsin O2 [human, spleen, mRNA, 1482 nt] Length = 1482 Score = 40.1 bits (20), Expect = 8.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 430 atcaaggtcactgcggttcctgttgggctttt 461 |||| ||||| || |||||||||||||||||| Sbjct: 536 atcagggtcagtgtggttcctgttgggctttt 567
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 25 cctcctccgcttgcttcctcctcc 48 ||||||||||||||| |||||||| Sbjct: 6636733 cctcctccgcttgctccctcctcc 6636756
>dbj|AP005719.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:B1130E10 Length = 151606 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 25 cctcctccgcttgcttcctcctcc 48 ||||||||||||||| |||||||| Sbjct: 29732 cctcctccgcttgctccctcctcc 29755
>gb|AY892942.1| Synthetic construct Homo sapiens clone FLH135296.01L cathepsin K (CTSK) mRNA, partial cds Length = 990 Score = 40.1 bits (20), Expect = 8.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 430 atcaaggtcactgcggttcctgttgggctttt 461 |||| ||||| || |||||||||||||||||| Sbjct: 395 atcagggtcagtgtggttcctgttgggctttt 426
>gb|AY892941.1| Synthetic construct Homo sapiens clone FLH135294.01L cathepsin K (CTSK) mRNA, partial cds Length = 990 Score = 40.1 bits (20), Expect = 8.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 430 atcaaggtcactgcggttcctgttgggctttt 461 |||| ||||| || |||||||||||||||||| Sbjct: 395 atcagggtcagtgtggttcctgttgggctttt 426
>dbj|BS000063.1| Pan troglodytes chromosome 22 clone:PTB-428P03, map 22, complete sequences Length = 136131 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 554 tatgtgtggtgatggttgtg 573 |||||||||||||||||||| Sbjct: 74570 tatgtgtggtgatggttgtg 74589
>gb|AF240629.1|AF240629 Homo sapiens chromosome 21 map 21q21 clone B47C12, complete sequence Length = 151696 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 554 tatgtgtggtgatggttgtg 573 |||||||||||||||||||| Sbjct: 73704 tatgtgtggtgatggttgtg 73723
>emb|AJ303304.1|HEC303304 Hepatitis C virus type 1b partial mRNA for p7/NS2 protein (e2(p7)-NS2 gene), clone B236b12 Length = 212 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 cctgctcccgctggcgctgc 111 |||||||||||||||||||| Sbjct: 74 cctgctcccgctggcgctgc 93
>ref|XM_560519.1| Anopheles gambiae str. PEST ENSANGP00000028370 (ENSANGG00000022283), partial mRNA Length = 297 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 268 acactattgagcaatttaag 287 |||||||||||||||||||| Sbjct: 167 acactattgagcaatttaag 186
>dbj|AK130134.1| Homo sapiens cDNA FLJ26624 fis, clone MPC03724, highly similar to Cathepsin K precursor (EC 3.4.22.38) Length = 1601 Score = 40.1 bits (20), Expect = 8.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 430 atcaaggtcactgcggttcctgttgggctttt 461 |||| ||||| || |||||||||||||||||| Sbjct: 443 atcagggtcagtgtggttcctgttgggctttt 474
>gb|AY893612.1| Synthetic construct Homo sapiens clone FLH131032.01X cathepsin K (CTSK) mRNA, complete cds Length = 990 Score = 40.1 bits (20), Expect = 8.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 430 atcaaggtcactgcggttcctgttgggctttt 461 |||| ||||| || |||||||||||||||||| Sbjct: 395 atcagggtcagtgtggttcctgttgggctttt 426
>dbj|AP005160.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0031C24 Length = 194111 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 25 cctcctccgcttgcttcctcctcc 48 ||||||||||||||| |||||||| Sbjct: 148827 cctcctccgcttgctccctcctcc 148850
>gb|AF124092.1|AF124092 Macaca mulatta cathepsin K mRNA, complete cds Length = 1029 Score = 40.1 bits (20), Expect = 8.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 430 atcaaggtcactgcggttcctgttgggctttt 461 |||| ||||| || |||||||||||||||||| Sbjct: 411 atcagggtcagtgtggttcctgttgggctttt 442
>dbj|AP001679.1| Homo sapiens genomic DNA, chromosome 21q, section 23/105 Length = 340000 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 554 tatgtgtggtgatggttgtg 573 |||||||||||||||||||| Sbjct: 259595 tatgtgtggtgatggttgtg 259614
>dbj|AP006199.1| Homo sapiens genomic DNA, chromosome 6, clone:RP11-482B5, complete sequence Length = 188161 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 557 gtgtggtgatggttgtgatg 576 |||||||||||||||||||| Sbjct: 134332 gtgtggtgatggttgtgatg 134351
>dbj|AP006196.1| Homo sapiens genomic DNA, chromosome 6, clone:RP11-347H8, complete sequence Length = 181660 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 557 gtgtggtgatggttgtgatg 576 |||||||||||||||||||| Sbjct: 8674 gtgtggtgatggttgtgatg 8693
>gb|DQ294220.1| Glossina morsitans morsitans TC1837 cathepsin F like protease mRNA, complete cds Length = 1738 Score = 40.1 bits (20), Expect = 8.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 430 atcaaggtcactgcggttcctgttgggctttt 461 |||||||| | |||||||| |||||||||||| Sbjct: 1102 atcaaggtaattgcggttcatgttgggctttt 1133
>gb|AF070927.1|AF070927 Macaca fascicularis cathepsin K mRNA, complete cds Length = 990 Score = 40.1 bits (20), Expect = 8.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 430 atcaaggtcactgcggttcctgttgggctttt 461 |||| ||||| || |||||||||||||||||| Sbjct: 395 atcagggtcagtgtggttcctgttgggctttt 426
>gb|U20280.1|HSU20280 Human cathepsin X mRNA, complete cds Length = 1597 Score = 40.1 bits (20), Expect = 8.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 430 atcaaggtcactgcggttcctgttgggctttt 461 |||| ||||| || |||||||||||||||||| Sbjct: 413 atcagggtcagtgtggttcctgttgggctttt 444
>emb|AL672267.10| Mouse DNA sequence from clone RP23-377K9 on chromosome X, complete sequence Length = 169331 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 542 ttgctgtgggtttatgtgtg 561 |||||||||||||||||||| Sbjct: 79928 ttgctgtgggtttatgtgtg 79947
>gb|U13665.1|HSU13665 Human cathepsin O (CTSO) mRNA, complete cds Length = 1661 Score = 40.1 bits (20), Expect = 8.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 430 atcaaggtcactgcggttcctgttgggctttt 461 |||| ||||| || |||||||||||||||||| Sbjct: 500 atcagggtcagtgtggttcctgttgggctttt 531
>emb|AL929125.1| Mouse DNA sequence from clone RP23-262O4 on chromosome 2, complete sequence Length = 183595 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 560 tggtgatggttgtgatggag 579 |||||||||||||||||||| Sbjct: 75985 tggtgatggttgtgatggag 75966
>dbj|AP000957.2| Homo sapiens genomic DNA, chromosome 21q21.1-q21.2 clone:B781M3, LL56-APP region, complete sequence Length = 190937 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 554 tatgtgtggtgatggttgtg 573 |||||||||||||||||||| Sbjct: 31684 tatgtgtggtgatggttgtg 31703
>dbj|AP002529.1| Homo sapiens genomic DNA, chromosome 6q21, anti-oncogene region, section 2/4 Length = 300000 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 557 gtgtggtgatggttgtgatg 576 |||||||||||||||||||| Sbjct: 44075 gtgtggtgatggttgtgatg 44094
>dbj|AB041731.1| Homo sapiens genomic DNA, chromosome 6q21, BAC clone:706L14, complete sequence Length = 156242 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 557 gtgtggtgatggttgtgatg 576 |||||||||||||||||||| Sbjct: 137302 gtgtggtgatggttgtgatg 137321
>dbj|AB042031.1| Homo sapiens genomic DNA, chromosome 6q21, BAC clone:515A4, complete sequence Length = 194732 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 557 gtgtggtgatggttgtgatg 576 |||||||||||||||||||| Sbjct: 33999 gtgtggtgatggttgtgatg 34018 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,947,734 Number of Sequences: 3902068 Number of extensions: 4947734 Number of successful extensions: 105810 Number of sequences better than 10.0: 91 Number of HSP's better than 10.0 without gapping: 92 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 105461 Number of HSP's gapped (non-prelim): 345 length of query: 606 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 583 effective length of database: 17,143,297,704 effective search space: 9994542561432 effective search space used: 9994542561432 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)