>RCOR2_BRARE (Q6P116) REST corepressor 2|
          Length = 536

 Score = 30.4 bits (67), Expect = 4.1
 Identities = 18/54 (33%), Positives = 23/54 (42%)
 Frame = +3

Query: 315 HHRGAFSGPGEVRDHPAFDVVPPSLPAGKRKSPGMLSWRRSRSRTPTHAQTPTP 476
           +H  A S P   +  P     PPS P    + P  L  R  ++RTP H   P P
Sbjct: 440 NHSSAQSSPPLTQPPPLLRPAPPSAPPSLLRQPPPLQTRPLQNRTP-HNHPPPP 492

>PKNH_MYCTU (Q11053) Probable serine/threonine-protein kinase pknH (EC|
           2.7.11.1)
          Length = 626

 Score = 29.3 bits (64), Expect = 9.1
 Identities = 18/49 (36%), Positives = 22/49 (44%), Gaps = 3/49 (6%)
 Frame = +3

Query: 339 PGEVRDHPAFDVVPPSLP--AGKRKSP-GMLSWRRSRSRTPTHAQTPTP 476
           P  V+  P     PP+ P  AG+R  P G  SW  +    P    TPTP
Sbjct: 325 PPGVQPAPKPSYTPPAQPGPAGQRPGPTGQPSWAPNSGPMPASGPTPTP 373


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 51,664,417
Number of Sequences: 219361
Number of extensions: 831125
Number of successful extensions: 3072
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2894
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3072
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5253413348
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)