ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart46a12
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1PIC2_YEAST (P40035) Mitochondrial phosphate carrier protein 2 (P... 38 0.008
2MPCP_CAEEL (P40614) Phosphate carrier protein, mitochondrial pre... 33 0.19
3MPCP_MOUSE (Q8VEM8) Phosphate carrier protein, mitochondrial pre... 32 0.32
4MPCP_RAT (P16036) Phosphate carrier protein, mitochondrial precu... 32 0.32
5MPCP_CHOFU (O61703) Phosphate carrier protein, mitochondrial pre... 31 0.71
6MPCP_HUMAN (Q00325) Phosphate carrier protein, mitochondrial pre... 29 3.5
7MPCP_BOVIN (P12234) Phosphate carrier protein, mitochondrial pre... 29 3.5

>PIC2_YEAST (P40035) Mitochondrial phosphate carrier protein 2 (Phosphate|
           transport protein 2) (PTP 2) (mPic 2) (Pi carrier
           isoform 2)
          Length = 300

 Score = 37.7 bits (86), Expect = 0.008
 Identities = 15/25 (60%), Positives = 18/25 (72%)
 Frame = +1

Query: 208 KIVMYSPAFYAACTAGGIASCGLTH 282
           KI +Y+  FYA CT GGI +CG TH
Sbjct: 9   KIQLYTKEFYATCTLGGIIACGPTH 33



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>MPCP_CAEEL (P40614) Phosphate carrier protein, mitochondrial precursor (PTP)|
          Length = 340

 Score = 33.1 bits (74), Expect = 0.19
 Identities = 14/34 (41%), Positives = 21/34 (61%)
 Frame = +1

Query: 187 SIRAPSEKIVMYSPAFYAACTAGGIASCGLTHMA 288
           ++ AP + +   S  +YA C  GG+ SCG+TH A
Sbjct: 28  AVSAPGQ-VEFGSGKYYAYCALGGVLSCGITHTA 60



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>MPCP_MOUSE (Q8VEM8) Phosphate carrier protein, mitochondrial precursor (PTP)|
           (Solute carrier family 25 member 3)
          Length = 357

 Score = 32.3 bits (72), Expect = 0.32
 Identities = 13/22 (59%), Positives = 15/22 (68%)
 Frame = +1

Query: 223 SPAFYAACTAGGIASCGLTHMA 288
           S  +YA C  GG+ SCGLTH A
Sbjct: 56  SMKYYALCGFGGVLSCGLTHTA 77



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>MPCP_RAT (P16036) Phosphate carrier protein, mitochondrial precursor (PTP)|
           (Solute carrier family 25 member 3)
          Length = 356

 Score = 32.3 bits (72), Expect = 0.32
 Identities = 13/22 (59%), Positives = 15/22 (68%)
 Frame = +1

Query: 223 SPAFYAACTAGGIASCGLTHMA 288
           S  +YA C  GG+ SCGLTH A
Sbjct: 55  SMKYYALCGFGGVLSCGLTHTA 76



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>MPCP_CHOFU (O61703) Phosphate carrier protein, mitochondrial precursor|
           (Phosphate transport protein) (PTP)
          Length = 349

 Score = 31.2 bits (69), Expect = 0.71
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = +1

Query: 223 SPAFYAACTAGGIASCGLTHMA 288
           S  ++A C  GGI SCG+TH A
Sbjct: 45  STKYFALCGLGGILSCGITHTA 66



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>MPCP_HUMAN (Q00325) Phosphate carrier protein, mitochondrial precursor (PTP)|
           (Solute carrier family 25 member 3)
          Length = 362

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 12/22 (54%), Positives = 13/22 (59%)
 Frame = +1

Query: 223 SPAFYAACTAGGIASCGLTHMA 288
           S  F+  C  GGI SCG TH A
Sbjct: 61  SGRFFILCGLGGIISCGTTHTA 82



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>MPCP_BOVIN (P12234) Phosphate carrier protein, mitochondrial precursor (PTP)|
           (Solute carrier family 25 member 3)
          Length = 362

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 12/22 (54%), Positives = 13/22 (59%)
 Frame = +1

Query: 223 SPAFYAACTAGGIASCGLTHMA 288
           S  F+  C  GGI SCG TH A
Sbjct: 61  SGRFFILCGLGGIISCGTTHTA 82


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,281,912
Number of Sequences: 219361
Number of extensions: 187609
Number of successful extensions: 571
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 551
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 570
length of database: 80,573,946
effective HSP length: 71
effective length of database: 64,999,315
effective search space used: 1559983560
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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