ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart46a04 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_470186.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1377 Score = 285 bits (144), Expect = 8e-74 Identities = 315/372 (84%) Strand = Plus / Plus Query: 221 tcattcattaccagagctttaatacttgttcttggatatgcatatccggcttatgattgt 280 ||||||||||| | |||||||| ||| |||||||||||||||| || || |||||||| Sbjct: 10 tcattcattactggggctttaatgcttattcttggatatgcatacccagcctatgattgc 69 Query: 281 tacaagacagtggagctgaataggcctgagattgagcagttgcggttctggtgtcagtac 340 |||||||| ||||| ||||| | ||||||||| ||| ||||||||||||||||||||||| Sbjct: 70 tacaagacggtggaactgaacaagcctgagatcgagaagttgcggttctggtgtcagtac 129 Query: 341 tggattttacttgcaatgcttactgttttcgaaagaattggggataatttcatatcttgg 400 |||||||||||||| | || |||||||| || ||| ||||||||||||| |||| ||| Sbjct: 130 tggattttacttgctgttctaactgtttttgatagagttggggataattttgtatcatgg 189 Query: 401 ttgccaatgtatagtgaagcaaagctggcttttatcgtgtacttgtggtatcccaagaca 460 ||||||||||| ||||||||||||||||| ||| |||| | |||||||||||||| ||| Sbjct: 190 ttgccaatgtacagtgaagcaaagctggcatttgtcgtatttttgtggtatcccaaaaca 249 Query: 461 caggggacttcttatgtctacgaatcgttcttcaagccgtatattgcaaaacacgaatct 520 | ||||||| | ||||| || ||||| ||||| || |||| ||||||||| ||||| || Sbjct: 250 ctggggactgcctatgtgtatgaatcattctttaaaccgtggattgcaaaatacgaagct 309 Query: 521 gagattgatcgtaatcttcttgagttgaggacaagggctagtgatatggctgttatttac 580 || || |||| ||||| |||||||||||||| || ||| | || ||||| ||| ||||| Sbjct: 310 gatatcgatcacaatctgcttgagttgaggactagagcttgcgacatggcggttctttac 369 Query: 581 ttccacaaggtt 592 ||||| |||||| Sbjct: 370 ttccagaaggtt 381
>dbj|AK065483.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013008G03, full insert sequence Length = 1531 Score = 285 bits (144), Expect = 8e-74 Identities = 315/372 (84%) Strand = Plus / Plus Query: 221 tcattcattaccagagctttaatacttgttcttggatatgcatatccggcttatgattgt 280 ||||||||||| | |||||||| ||| |||||||||||||||| || || |||||||| Sbjct: 262 tcattcattactggggctttaatgcttattcttggatatgcatacccagcctatgattgc 321 Query: 281 tacaagacagtggagctgaataggcctgagattgagcagttgcggttctggtgtcagtac 340 |||||||| ||||| ||||| | ||||||||| ||| ||||||||||||||||||||||| Sbjct: 322 tacaagacggtggaactgaacaagcctgagatcgagaagttgcggttctggtgtcagtac 381 Query: 341 tggattttacttgcaatgcttactgttttcgaaagaattggggataatttcatatcttgg 400 |||||||||||||| | || |||||||| || ||| ||||||||||||| |||| ||| Sbjct: 382 tggattttacttgctgttctaactgtttttgatagagttggggataattttgtatcatgg 441 Query: 401 ttgccaatgtatagtgaagcaaagctggcttttatcgtgtacttgtggtatcccaagaca 460 ||||||||||| ||||||||||||||||| ||| |||| | |||||||||||||| ||| Sbjct: 442 ttgccaatgtacagtgaagcaaagctggcatttgtcgtatttttgtggtatcccaaaaca 501 Query: 461 caggggacttcttatgtctacgaatcgttcttcaagccgtatattgcaaaacacgaatct 520 | ||||||| | ||||| || ||||| ||||| || |||| ||||||||| ||||| || Sbjct: 502 ctggggactgcctatgtgtatgaatcattctttaaaccgtggattgcaaaatacgaagct 561 Query: 521 gagattgatcgtaatcttcttgagttgaggacaagggctagtgatatggctgttatttac 580 || || |||| ||||| |||||||||||||| || ||| | || ||||| ||| ||||| Sbjct: 562 gatatcgatcacaatctgcttgagttgaggactagagcttgcgacatggcggttctttac 621 Query: 581 ttccacaaggtt 592 ||||| |||||| Sbjct: 622 ttccagaaggtt 633
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 135 bits (68), Expect = 2e-28 Identities = 92/100 (92%) Strand = Plus / Plus Query: 244 acttgttcttggatatgcatatccggcttatgattgttacaagacagtggagctgaatag 303 |||| |||||||||||||||| || || |||||||| |||||||||||||||||||| || Sbjct: 1135718 acttattcttggatatgcatacccagcctatgattgctacaagacagtggagctgaacag 1135777 Query: 304 gcctgagattgagcagttgcggttctggtgtcagtactgg 343 |||||| |||||||||||||||||||||||||||||||| Sbjct: 1135778 acctgaggttgagcagttgcggttctggtgtcagtactgg 1135817 Score = 101 bits (51), Expect = 3e-18 Identities = 120/143 (83%) Strand = Plus / Plus Query: 461 caggggacttcttatgtctacgaatcgttcttcaagccgtatattgcaaaacacgaatct 520 ||||| ||||| ||||| || || || |||||||||||||| |||| ||||| ||| || Sbjct: 1136180 cagggcacttcctatgtgtatgagtcattcttcaagccgtacattggcaaacatgaagct 1136239 Query: 521 gagattgatcgtaatcttcttgagttgaggacaagggctagtgatatggctgttatttac 580 || |||||||| ||||| |||||||||||||| || ||| |||||||||| ||| |||| Sbjct: 1136240 gaaattgatcgcaatctacttgagttgaggactagagctggtgatatggcagttcattac 1136299 Query: 581 ttccacaaggttgcagactacag 603 ||||| ||| | ||||||||||| Sbjct: 1136300 ttccagaagatcgcagactacag 1136322 Score = 91.7 bits (46), Expect = 3e-15 Identities = 61/66 (92%) Strand = Plus / Plus Query: 399 ggttgccaatgtatagtgaagcaaagctggcttttatcgtgtacttgtggtatcccaaga 458 |||| |||||||||||||||||||||||||| ||||||||||| | ||||||||||||| Sbjct: 1136052 ggttaccaatgtatagtgaagcaaagctggcatttatcgtgtatctatggtatcccaaga 1136111 Query: 459 cacagg 464 |||||| Sbjct: 1136112 cacagg 1136117 Score = 42.1 bits (21), Expect = 2.1 Identities = 42/49 (85%) Strand = Plus / Plus Query: 342 ggattttacttgcaatgcttactgttttcgaaagaattggggataattt 390 |||||||||| ||| | || |||||||| || ||| ||||||||||||| Sbjct: 1135903 ggattttactagcagttctaactgtttttgagagagttggggataattt 1135951
>dbj|AP004078.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1020_C02 Length = 124578 Score = 135 bits (68), Expect = 2e-28 Identities = 92/100 (92%) Strand = Plus / Plus Query: 244 acttgttcttggatatgcatatccggcttatgattgttacaagacagtggagctgaatag 303 |||| |||||||||||||||| || || |||||||| |||||||||||||||||||| || Sbjct: 88242 acttattcttggatatgcatacccagcctatgattgctacaagacagtggagctgaacag 88301 Query: 304 gcctgagattgagcagttgcggttctggtgtcagtactgg 343 |||||| |||||||||||||||||||||||||||||||| Sbjct: 88302 acctgaggttgagcagttgcggttctggtgtcagtactgg 88341 Score = 101 bits (51), Expect = 3e-18 Identities = 120/143 (83%) Strand = Plus / Plus Query: 461 caggggacttcttatgtctacgaatcgttcttcaagccgtatattgcaaaacacgaatct 520 ||||| ||||| ||||| || || || |||||||||||||| |||| ||||| ||| || Sbjct: 88704 cagggcacttcctatgtgtatgagtcattcttcaagccgtacattggcaaacatgaagct 88763 Query: 521 gagattgatcgtaatcttcttgagttgaggacaagggctagtgatatggctgttatttac 580 || |||||||| ||||| |||||||||||||| || ||| |||||||||| ||| |||| Sbjct: 88764 gaaattgatcgcaatctacttgagttgaggactagagctggtgatatggcagttcattac 88823 Query: 581 ttccacaaggttgcagactacag 603 ||||| ||| | ||||||||||| Sbjct: 88824 ttccagaagatcgcagactacag 88846 Score = 91.7 bits (46), Expect = 3e-15 Identities = 61/66 (92%) Strand = Plus / Plus Query: 399 ggttgccaatgtatagtgaagcaaagctggcttttatcgtgtacttgtggtatcccaaga 458 |||| |||||||||||||||||||||||||| ||||||||||| | ||||||||||||| Sbjct: 88576 ggttaccaatgtatagtgaagcaaagctggcatttatcgtgtatctatggtatcccaaga 88635 Query: 459 cacagg 464 |||||| Sbjct: 88636 cacagg 88641 Score = 42.1 bits (21), Expect = 2.1 Identities = 42/49 (85%) Strand = Plus / Plus Query: 342 ggattttacttgcaatgcttactgttttcgaaagaattggggataattt 390 |||||||||| ||| | || |||||||| || ||| ||||||||||||| Sbjct: 88427 ggattttactagcagttctaactgtttttgagagagttggggataattt 88475
>gb|AC140005.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJA1004C08, complete sequence Length = 138054 Score = 109 bits (55), Expect = 1e-20 Identities = 85/95 (89%) Strand = Plus / Minus Query: 249 ttcttggatatgcatatccggcttatgattgttacaagacagtggagctgaataggcctg 308 |||||||||||||||| || || |||||||| |||||||| ||||| ||||| | ||||| Sbjct: 43956 ttcttggatatgcatacccagcctatgattgctacaagacggtggaactgaacaagcctg 43897 Query: 309 agattgagcagttgcggttctggtgtcagtactgg 343 |||| ||| |||||||||||||||||||||||||| Sbjct: 43896 agatcgagaagttgcggttctggtgtcagtactgg 43862 Score = 71.9 bits (36), Expect = 2e-09 Identities = 108/132 (81%) Strand = Plus / Minus Query: 461 caggggacttcttatgtctacgaatcgttcttcaagccgtatattgcaaaacacgaatct 520 ||||||||| | ||||| || ||||| ||||| || |||| ||||||||| ||||| || Sbjct: 43487 caggggactgcctatgtgtatgaatcattctttaaaccgtggattgcaaaatacgaagct 43428 Query: 521 gagattgatcgtaatcttcttgagttgaggacaagggctagtgatatggctgttatttac 580 || || |||| ||||| |||||||||||||| || ||| | || ||||| ||| ||||| Sbjct: 43427 gatatcgatcacaatctgcttgagttgaggactagagcttgcgacatggcggttctttac 43368 Query: 581 ttccacaaggtt 592 ||||| |||||| Sbjct: 43367 ttccagaaggtt 43356 Score = 69.9 bits (35), Expect = 9e-09 Identities = 56/63 (88%) Strand = Plus / Minus Query: 399 ggttgccaatgtatagtgaagcaaagctggcttttatcgtgtacttgtggtatcccaaga 458 ||||||||||||| ||||||||||||||||| ||| |||| | |||||||||||||| | Sbjct: 43622 ggttgccaatgtacagtgaagcaaagctggcatttgtcgtatttttgtggtatcccaaaa 43563 Query: 459 cac 461 ||| Sbjct: 43562 cac 43560 Score = 42.1 bits (21), Expect = 2.1 Identities = 42/49 (85%) Strand = Plus / Minus Query: 342 ggattttacttgcaatgcttactgttttcgaaagaattggggataattt 390 ||||||||||||| | || |||||||| || ||| ||||||||||||| Sbjct: 43772 ggattttacttgctgttctaactgtttttgatagagttggggataattt 43724
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 109 bits (55), Expect = 1e-20 Identities = 85/95 (89%) Strand = Plus / Minus Query: 249 ttcttggatatgcatatccggcttatgattgttacaagacagtggagctgaataggcctg 308 |||||||||||||||| || || |||||||| |||||||| ||||| ||||| | ||||| Sbjct: 1819094 ttcttggatatgcatacccagcctatgattgctacaagacggtggaactgaacaagcctg 1819035 Query: 309 agattgagcagttgcggttctggtgtcagtactgg 343 |||| ||| |||||||||||||||||||||||||| Sbjct: 1819034 agatcgagaagttgcggttctggtgtcagtactgg 1819000 Score = 71.9 bits (36), Expect = 2e-09 Identities = 108/132 (81%) Strand = Plus / Minus Query: 461 caggggacttcttatgtctacgaatcgttcttcaagccgtatattgcaaaacacgaatct 520 ||||||||| | ||||| || ||||| ||||| || |||| ||||||||| ||||| || Sbjct: 1818625 caggggactgcctatgtgtatgaatcattctttaaaccgtggattgcaaaatacgaagct 1818566 Query: 521 gagattgatcgtaatcttcttgagttgaggacaagggctagtgatatggctgttatttac 580 || || |||| ||||| |||||||||||||| || ||| | || ||||| ||| ||||| Sbjct: 1818565 gatatcgatcacaatctgcttgagttgaggactagagcttgcgacatggcggttctttac 1818506 Query: 581 ttccacaaggtt 592 ||||| |||||| Sbjct: 1818505 ttccagaaggtt 1818494 Score = 69.9 bits (35), Expect = 9e-09 Identities = 56/63 (88%) Strand = Plus / Minus Query: 399 ggttgccaatgtatagtgaagcaaagctggcttttatcgtgtacttgtggtatcccaaga 458 ||||||||||||| ||||||||||||||||| ||| |||| | |||||||||||||| | Sbjct: 1818760 ggttgccaatgtacagtgaagcaaagctggcatttgtcgtatttttgtggtatcccaaaa 1818701 Query: 459 cac 461 ||| Sbjct: 1818700 cac 1818698 Score = 42.1 bits (21), Expect = 2.1 Identities = 42/49 (85%) Strand = Plus / Minus Query: 342 ggattttacttgcaatgcttactgttttcgaaagaattggggataattt 390 ||||||||||||| | || |||||||| || ||| ||||||||||||| Sbjct: 1818910 ggattttacttgctgttctaactgtttttgatagagttggggataattt 1818862 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 127 cccgcgtcgccgccgccgac 146 |||||||||||||||||||| Sbjct: 3459786 cccgcgtcgccgccgccgac 3459767
>gb|AC098693.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1004C08, complete sequence Length = 133090 Score = 109 bits (55), Expect = 1e-20 Identities = 85/95 (89%) Strand = Plus / Plus Query: 249 ttcttggatatgcatatccggcttatgattgttacaagacagtggagctgaataggcctg 308 |||||||||||||||| || || |||||||| |||||||| ||||| ||||| | ||||| Sbjct: 15268 ttcttggatatgcatacccagcctatgattgctacaagacggtggaactgaacaagcctg 15327 Query: 309 agattgagcagttgcggttctggtgtcagtactgg 343 |||| ||| |||||||||||||||||||||||||| Sbjct: 15328 agatcgagaagttgcggttctggtgtcagtactgg 15362 Score = 71.9 bits (36), Expect = 2e-09 Identities = 108/132 (81%) Strand = Plus / Plus Query: 461 caggggacttcttatgtctacgaatcgttcttcaagccgtatattgcaaaacacgaatct 520 ||||||||| | ||||| || ||||| ||||| || |||| ||||||||| ||||| || Sbjct: 15737 caggggactgcctatgtgtatgaatcattctttaaaccgtggattgcaaaatacgaagct 15796 Query: 521 gagattgatcgtaatcttcttgagttgaggacaagggctagtgatatggctgttatttac 580 || || |||| ||||| |||||||||||||| || ||| | || ||||| ||| ||||| Sbjct: 15797 gatatcgatcacaatctgcttgagttgaggactagagcttgcgacatggcggttctttac 15856 Query: 581 ttccacaaggtt 592 ||||| |||||| Sbjct: 15857 ttccagaaggtt 15868 Score = 69.9 bits (35), Expect = 9e-09 Identities = 56/63 (88%) Strand = Plus / Plus Query: 399 ggttgccaatgtatagtgaagcaaagctggcttttatcgtgtacttgtggtatcccaaga 458 ||||||||||||| ||||||||||||||||| ||| |||| | |||||||||||||| | Sbjct: 15602 ggttgccaatgtacagtgaagcaaagctggcatttgtcgtatttttgtggtatcccaaaa 15661 Query: 459 cac 461 ||| Sbjct: 15662 cac 15664 Score = 42.1 bits (21), Expect = 2.1 Identities = 42/49 (85%) Strand = Plus / Plus Query: 342 ggattttacttgcaatgcttactgttttcgaaagaattggggataattt 390 ||||||||||||| | || |||||||| || ||| ||||||||||||| Sbjct: 15452 ggattttacttgctgttctaactgtttttgatagagttggggataattt 15500
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 109 bits (55), Expect = 1e-20 Identities = 85/95 (89%) Strand = Plus / Minus Query: 249 ttcttggatatgcatatccggcttatgattgttacaagacagtggagctgaataggcctg 308 |||||||||||||||| || || |||||||| |||||||| ||||| ||||| | ||||| Sbjct: 1819092 ttcttggatatgcatacccagcctatgattgctacaagacggtggaactgaacaagcctg 1819033 Query: 309 agattgagcagttgcggttctggtgtcagtactgg 343 |||| ||| |||||||||||||||||||||||||| Sbjct: 1819032 agatcgagaagttgcggttctggtgtcagtactgg 1818998 Score = 71.9 bits (36), Expect = 2e-09 Identities = 108/132 (81%) Strand = Plus / Minus Query: 461 caggggacttcttatgtctacgaatcgttcttcaagccgtatattgcaaaacacgaatct 520 ||||||||| | ||||| || ||||| ||||| || |||| ||||||||| ||||| || Sbjct: 1818623 caggggactgcctatgtgtatgaatcattctttaaaccgtggattgcaaaatacgaagct 1818564 Query: 521 gagattgatcgtaatcttcttgagttgaggacaagggctagtgatatggctgttatttac 580 || || |||| ||||| |||||||||||||| || ||| | || ||||| ||| ||||| Sbjct: 1818563 gatatcgatcacaatctgcttgagttgaggactagagcttgcgacatggcggttctttac 1818504 Query: 581 ttccacaaggtt 592 ||||| |||||| Sbjct: 1818503 ttccagaaggtt 1818492 Score = 69.9 bits (35), Expect = 9e-09 Identities = 56/63 (88%) Strand = Plus / Minus Query: 399 ggttgccaatgtatagtgaagcaaagctggcttttatcgtgtacttgtggtatcccaaga 458 ||||||||||||| ||||||||||||||||| ||| |||| | |||||||||||||| | Sbjct: 1818758 ggttgccaatgtacagtgaagcaaagctggcatttgtcgtatttttgtggtatcccaaaa 1818699 Query: 459 cac 461 ||| Sbjct: 1818698 cac 1818696 Score = 42.1 bits (21), Expect = 2.1 Identities = 42/49 (85%) Strand = Plus / Minus Query: 342 ggattttacttgcaatgcttactgttttcgaaagaattggggataattt 390 ||||||||||||| | || |||||||| || ||| ||||||||||||| Sbjct: 1818908 ggattttacttgctgttctaactgtttttgatagagttggggataattt 1818860 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 127 cccgcgtcgccgccgccgac 146 |||||||||||||||||||| Sbjct: 3459897 cccgcgtcgccgccgccgac 3459878
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 40 tcggtcgcctcgccgccgacggagggcccc 69 ||||||||||||||||||||||| |||||| Sbjct: 874670 tcggtcgcctcgccgccgacggacggcccc 874699
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 317 cagttgcggttctggtgtcagtactgg 343 |||||||| |||||||||||||||||| Sbjct: 20673629 cagttgcgtttctggtgtcagtactgg 20673603 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 attccctccccctccccctc 41 |||||||||||||||||||| Sbjct: 20126708 attccctccccctccccctc 20126727
>dbj|AP005092.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1112_E07 Length = 132055 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 317 cagttgcggttctggtgtcagtactgg 343 |||||||| |||||||||||||||||| Sbjct: 67240 cagttgcgtttctggtgtcagtactgg 67214
>dbj|AP005314.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0515E01 Length = 140063 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 317 cagttgcggttctggtgtcagtactgg 343 |||||||| |||||||||||||||||| Sbjct: 139287 cagttgcgtttctggtgtcagtactgg 139261
>ref|NM_123620.2| Arabidopsis thaliana unknown protein AT5G42560 mRNA, complete cds Length = 1121 Score = 44.1 bits (22), Expect = 0.53 Identities = 61/74 (82%) Strand = Plus / Plus Query: 272 tatgattgttacaagacagtggagctgaataggcctgagattgagcagttgcggttctgg 331 ||||| ||||||||||| || || |||||||||||| || ||||| | || || ||| Sbjct: 251 tatgaatgttacaagactgttgaaaagaataggcctgaaatcgagcaacttcgcttttgg 310 Query: 332 tgtcagtactggat 345 |||||||||||||| Sbjct: 311 tgtcagtactggat 324
>ref|XM_475881.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2697 Score = 44.1 bits (22), Expect = 0.53 Identities = 31/34 (91%) Strand = Plus / Plus Query: 28 tccccctccccctcggtcgcctcgccgccgacgg 61 ||||||||| ||||| ||||||||||||||||| Sbjct: 302 tccccctccgcctcgcccgcctcgccgccgacgg 335
>ref|NM_190040.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1374 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Minus Query: 130 gcgtcgccgccgccgacgagggccag 155 ||||| |||||||||||||||||||| Sbjct: 509 gcgtctccgccgccgacgagggccag 484
>gb|AC093956.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1263_E10, complete sequence Length = 116469 Score = 44.1 bits (22), Expect = 0.53 Identities = 31/34 (91%) Strand = Plus / Minus Query: 28 tccccctccccctcggtcgcctcgccgccgacgg 61 ||||||||| ||||| ||||||||||||||||| Sbjct: 80036 tccccctccgcctcgcccgcctcgccgccgacgg 80003
>gb|BT025253.1| Arabidopsis thaliana At5g42560 mRNA, complete cds Length = 891 Score = 44.1 bits (22), Expect = 0.53 Identities = 61/74 (82%) Strand = Plus / Plus Query: 272 tatgattgttacaagacagtggagctgaataggcctgagattgagcagttgcggttctgg 331 ||||| ||||||||||| || || |||||||||||| || ||||| | || || ||| Sbjct: 61 tatgaatgttacaagactgttgaaaagaataggcctgaaatcgagcaacttcgcttttgg 120 Query: 332 tgtcagtactggat 345 |||||||||||||| Sbjct: 121 tgtcagtactggat 134
>gb|AC123949.5| Mus musculus BAC clone RP23-119H13 from 14, complete sequence Length = 196995 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 25 ccctccccctccccctcggtcgcctc 50 ||||||||||||||||||||| |||| Sbjct: 31849 ccctccccctccccctcggtcccctc 31874
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 44.1 bits (22), Expect = 0.53 Identities = 31/34 (91%) Strand = Plus / Minus Query: 135 gccgccgccgacgagggccagcaccccgcgcgcg 168 |||||||||| ||||| || |||||||||||||| Sbjct: 1592382 gccgccgccgccgaggccctgcaccccgcgcgcg 1592349
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Minus Query: 73 cctcccagaaccttctggaagcttcc 98 |||||| ||||||||||||||||||| Sbjct: 26563990 cctcccggaaccttctggaagcttcc 26563965 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 130 gcgtcgccgccgccgacgagg 150 ||||||||||||||||||||| Sbjct: 23113800 gcgtcgccgccgccgacgagg 23113780 Score = 40.1 bits (20), Expect = 8.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 31 ccctccccctcggtcgcctcgccgccga 58 |||||||||||||||| | ||||||||| Sbjct: 24637906 ccctccccctcggtcgacgcgccgccga 24637933
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 44.1 bits (22), Expect = 0.53 Identities = 31/34 (91%) Strand = Plus / Minus Query: 28 tccccctccccctcggtcgcctcgccgccgacgg 61 ||||||||| ||||| ||||||||||||||||| Sbjct: 27367579 tccccctccgcctcgcccgcctcgccgccgacgg 27367546 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 131 cgtcgccgccgccgacgaggg 151 ||||||||||||||||||||| Sbjct: 25477741 cgtcgccgccgccgacgaggg 25477761 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 23 ttccctccccctccccctcg 42 |||||||||||||||||||| Sbjct: 15097 ttccctccccctccccctcg 15078
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 130 gcgtcgccgccgccgacgagggccag 155 ||||| |||||||||||||||||||| Sbjct: 40962853 gcgtctccgccgccgacgagggccag 40962878 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 128 ccgcgtcgccgccgccgacgagggc 152 |||||||||||||||||| |||||| Sbjct: 39870132 ccgcgtcgccgccgccgaggagggc 39870156 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 125 cgcccgcgtcgccgccgccg 144 |||||||||||||||||||| Sbjct: 37677170 cgcccgcgtcgccgccgccg 37677151 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 124 gcgcccgcgtcgccgccgccgacg 147 ||||||||| |||||||||||||| Sbjct: 34570570 gcgcccgcgacgccgccgccgacg 34570593 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 125 cgcccgcgtcgccgccgccgacga 148 |||||||| ||||||||||||||| Sbjct: 20464903 cgcccgcgccgccgccgccgacga 20464926 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 124 gcgcccgcgtcgccgccgccgacg 147 ||||||||| |||||||||||||| Sbjct: 2086041 gcgcccgcgccgccgccgccgacg 2086064
>emb|BX833075.1|CNS09YNQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL33ZA05 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 727 Score = 44.1 bits (22), Expect = 0.53 Identities = 61/74 (82%) Strand = Plus / Plus Query: 272 tatgattgttacaagacagtggagctgaataggcctgagattgagcagttgcggttctgg 331 ||||| ||||||||||| || || |||||||||||| || ||||| | || || ||| Sbjct: 215 tatgaatgttacaagactgttgaaaagaataggcctgaaatcgagcaacttcgcttttgg 274 Query: 332 tgtcagtactggat 345 |||||||||||||| Sbjct: 275 tgtcagtactggat 288
>emb|BX832901.1|CNS09YRT Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL20ZG01 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1188 Score = 44.1 bits (22), Expect = 0.53 Identities = 61/74 (82%) Strand = Plus / Plus Query: 272 tatgattgttacaagacagtggagctgaataggcctgagattgagcagttgcggttctgg 331 ||||| ||||||||||| || || |||||||||||| || ||||| | || || ||| Sbjct: 230 tatgaatgttacaagactgttgaaaagaataggcctgacatcgagcaacttcgcttttgg 289 Query: 332 tgtcagtactggat 345 |||||||||||||| Sbjct: 290 tgtcagtactggat 303
>dbj|AP003246.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0423A12 Length = 178649 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 130 gcgtcgccgccgccgacgagggccag 155 ||||| |||||||||||||||||||| Sbjct: 91278 gcgtctccgccgccgacgagggccag 91303
>gb|AY085687.1| Arabidopsis thaliana clone 17101 mRNA, complete sequence Length = 1364 Score = 44.1 bits (22), Expect = 0.53 Identities = 61/74 (82%) Strand = Plus / Plus Query: 272 tatgattgttacaagacagtggagctgaataggcctgagattgagcagttgcggttctgg 331 ||||| ||||||||||| || || |||||||||||| || ||||| | || || ||| Sbjct: 251 tatgaatgttacaagactgttgaaaagaataggcctgaaatcgagcaacttcgcttttgg 310 Query: 332 tgtcagtactggat 345 |||||||||||||| Sbjct: 311 tgtcagtactggat 324
>gb|AC151278.2| Mus musculus BAC clone RP24-164I15 from chromosome 17, complete sequence Length = 175960 Score = 44.1 bits (22), Expect = 0.53 Identities = 28/30 (93%) Strand = Plus / Minus Query: 11 ccctcttttgaattccctccccctccccct 40 ||||||| | |||||||||||||||||||| Sbjct: 165671 ccctcttctcaattccctccccctccccct 165642
>dbj|AK073528.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033044P17, full insert sequence Length = 2593 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Minus Query: 73 cctcccagaaccttctggaagcttcc 98 |||||| ||||||||||||||||||| Sbjct: 153 cctcccggaaccttctggaagcttcc 128
>dbj|AK072525.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023129D09, full insert sequence Length = 1661 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Minus Query: 130 gcgtcgccgccgccgacgagggccag 155 ||||| |||||||||||||||||||| Sbjct: 564 gcgtctccgccgccgacgagggccag 539
>dbj|AK060679.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-C10, full insert sequence Length = 1573 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Minus Query: 130 gcgtcgccgccgccgacgagggccag 155 ||||| |||||||||||||||||||| Sbjct: 527 gcgtctccgccgccgacgagggccag 502
>gb|AY091089.1| Arabidopsis thaliana At5g42560 mRNA sequence Length = 1249 Score = 44.1 bits (22), Expect = 0.53 Identities = 61/74 (82%) Strand = Plus / Plus Query: 272 tatgattgttacaagacagtggagctgaataggcctgagattgagcagttgcggttctgg 331 ||||| ||||||||||| || || |||||||||||| || ||||| | || || ||| Sbjct: 241 tatgaatgttacaagactgttgaaaagaataggcctgaaatcgagcaacttcgcttttgg 300 Query: 332 tgtcagtactggat 345 |||||||||||||| Sbjct: 301 tgtcagtactggat 314
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Minus Query: 73 cctcccagaaccttctggaagcttcc 98 |||||| ||||||||||||||||||| Sbjct: 26492159 cctcccggaaccttctggaagcttcc 26492134 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 130 gcgtcgccgccgccgacgagg 150 ||||||||||||||||||||| Sbjct: 23041991 gcgtcgccgccgccgacgagg 23041971 Score = 40.1 bits (20), Expect = 8.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 31 ccctccccctcggtcgcctcgccgccga 58 |||||||||||||||| | ||||||||| Sbjct: 24566112 ccctccccctcggtcgacgcgccgccga 24566139
>emb|AL713945.5|CNS07YPO Oryza sativa chromosome 12, . BAC OJ1727_H11 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 85710 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Minus Query: 73 cctcccagaaccttctggaagcttcc 98 |||||| ||||||||||||||||||| Sbjct: 33995 cctcccggaaccttctggaagcttcc 33970
>gb|AC154192.3| Mus musculus BAC clone RP24-70F14 from chromosome 17, complete sequence Length = 234088 Score = 44.1 bits (22), Expect = 0.53 Identities = 28/30 (93%) Strand = Plus / Plus Query: 11 ccctcttttgaattccctccccctccccct 40 ||||||| | |||||||||||||||||||| Sbjct: 166275 ccctcttctcaattccctccccctccccct 166304
>gb|AC147096.3| Mus musculus BAC clone RP23-448H3 from 14, complete sequence Length = 198614 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Minus Query: 25 ccctccccctccccctcggtcgcctc 50 ||||||||||||||||||||| |||| Sbjct: 46342 ccctccccctccccctcggtcccctc 46317
>emb|AL672195.9| Mouse DNA sequence from clone RP23-468E16 on chromosome 9, complete sequence Length = 182503 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Plus Query: 20 gaattccctccccctccccctc 41 |||||||||||||||||||||| Sbjct: 151263 gaattccctccccctccccctc 151284
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 153 cagcaccccgcgcgcgctctcggcc 177 ||||||||||||||||| ||||||| Sbjct: 803958 cagcaccccgcgcgcgccctcggcc 803934
>ref|NM_106221.1| Arabidopsis thaliana unknown protein AT1G75700 mRNA, complete cds Length = 501 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 252 ttggatatgcatatccggcttatga 276 |||||||||||||||| |||||||| Sbjct: 8 ttggatatgcatatcctgcttatga 32
>ref|XM_475722.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 3168 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 131 cgtcgccgccgccgacgaggg 151 ||||||||||||||||||||| Sbjct: 258 cgtcgccgccgccgacgaggg 278
>ref|XM_474352.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 600 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 124 gcgcccgcgtcgccgccgccg 144 ||||||||||||||||||||| Sbjct: 317 gcgcccgcgtcgccgccgccg 297
>ref|NM_189931.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1053 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 128 ccgcgtcgccgccgccgacgagggc 152 |||||||||||||||||| |||||| Sbjct: 906 ccgcgtcgccgccgccgaggagggc 930
>gb|AC130603.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1130G10, complete sequence Length = 143073 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 131 cgtcgccgccgccgacgaggg 151 ||||||||||||||||||||| Sbjct: 118102 cgtcgccgccgccgacgaggg 118122
>emb|Z93241.11|HS222E13 Human DNA sequence from clone RP1-222E13 on chromosome 22, complete sequence Length = 123360 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 21 aattccctccccctccccctc 41 ||||||||||||||||||||| Sbjct: 68514 aattccctccccctccccctc 68534
>emb|AL606668.2|OSJN00083 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0064G10, complete sequence Length = 150206 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 124 gcgcccgcgtcgccgccgccg 144 ||||||||||||||||||||| Sbjct: 102254 gcgcccgcgtcgccgccgccg 102234
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 124 gcgcccgcgtcgccgccgccg 144 ||||||||||||||||||||| Sbjct: 34648133 gcgcccgcgtcgccgccgccg 34648113 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 128 ccgcgtcgccgccgccgacg 147 |||||||||||||||||||| Sbjct: 30904998 ccgcgtcgccgccgccgacg 30905017
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 130 gcgtcgccgccgccgacgagggcca 154 |||||||||||||| |||||||||| Sbjct: 19719382 gcgtcgccgccgccaacgagggcca 19719358
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 128 ccgcgtcgccgccgccgacgagggc 152 |||||||||||||||||||| |||| Sbjct: 2286698 ccgcgtcgccgccgccgacgcgggc 2286674
>gb|AC006434.5|AC006434 Genomic sequence for Arabidopsis thaliana BAC F10A5, complete sequence Length = 129547 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 252 ttggatatgcatatccggcttatga 276 |||||||||||||||| |||||||| Sbjct: 35232 ttggatatgcatatcctgcttatga 35208
>dbj|AP003433.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0004D12 Length = 138136 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 128 ccgcgtcgccgccgccgacgagggc 152 |||||||||||||||||| |||||| Sbjct: 50840 ccgcgtcgccgccgccgaggagggc 50864
>gb|AC122335.4| Mus musculus BAC clone RP23-350F7 from chromosome 10, complete sequence Length = 193300 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 21 aattccctccccctccccctc 41 ||||||||||||||||||||| Sbjct: 124785 aattccctccccctccccctc 124765
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 130 gcgtcgccgccgccgacgagg 150 ||||||||||||||||||||| Sbjct: 7097225 gcgtcgccgccgccgacgagg 7097245
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 130 gcgtcgccgccgccgacgagg 150 ||||||||||||||||||||| Sbjct: 2386809 gcgtcgccgccgccgacgagg 2386829
>dbj|AP005158.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0007M04 Length = 176293 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 130 gcgtcgccgccgccgacgagggcca 154 |||||||||||||| |||||||||| Sbjct: 48333 gcgtcgccgccgccaacgagggcca 48309
>dbj|AK121863.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033103C19, full insert sequence Length = 786 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 128 ccgcgtcgccgccgccgacgagggc 152 |||||||||||||||||| |||||| Sbjct: 416 ccgcgtcgccgccgccgaggagggc 440
>dbj|AK107178.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-124-G11, full insert sequence Length = 3602 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 131 cgtcgccgccgccgacgaggg 151 ||||||||||||||||||||| Sbjct: 343 cgtcgccgccgccgacgaggg 363
>dbj|AK100001.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013134P07, full insert sequence Length = 2064 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 130 gcgtcgccgccgccgacgagg 150 ||||||||||||||||||||| Sbjct: 113 gcgtcgccgccgccgacgagg 93
>dbj|AK071387.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023091J19, full insert sequence Length = 906 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 130 gcgtcgccgccgccgacgagg 150 ||||||||||||||||||||| Sbjct: 113 gcgtcgccgccgccgacgagg 93
>dbj|AK059971.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-211-H01, full insert sequence Length = 905 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 130 gcgtcgccgccgccgacgagg 150 ||||||||||||||||||||| Sbjct: 112 gcgtcgccgccgccgacgagg 92
>emb|AL732349.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0402C08, complete sequence Length = 100836 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 124 gcgcccgcgtcgccgccgccg 144 ||||||||||||||||||||| Sbjct: 54234 gcgcccgcgtcgccgccgccg 54214
>gb|AF081810.1|AF081810 Lymantria dispar nucleopolyhedrovirus, complete genome Length = 161046 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 130 gcgtcgccgccgccgacgagg 150 ||||||||||||||||||||| Sbjct: 51084 gcgtcgccgccgccgacgagg 51064 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 125 cgcccgcgtcgccgccgccg 144 |||||||||||||||||||| Sbjct: 78002 cgcccgcgtcgccgccgccg 77983 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 124 gcgcccgcgtcgccgccgccgacg 147 |||||||||||| ||||||||||| Sbjct: 38286 gcgcccgcgtcggcgccgccgacg 38309
>emb|AL928753.3|CNS08CBQ Oryza sativa chromosome 12, . BAC OSJNBb0076G11 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 135323 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 130 gcgtcgccgccgccgacgagg 150 ||||||||||||||||||||| Sbjct: 64597 gcgtcgccgccgccgacgagg 64617
>gb|AC102159.10| Mus musculus chromosome 19, clone RP23-398L11, complete sequence Length = 197134 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 14 tcttttgaattccctccccctccc 37 |||||||| ||||||||||||||| Sbjct: 104617 tcttttgacttccctccccctccc 104594
>gb|AF386526.1| Shigella flexneri 2a str. 301 virulence plasmid pCP301, complete sequence Length = 221618 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 gcacctcccgcccctgctcc 118 |||||||||||||||||||| Sbjct: 200206 gcacctcccgcccctgctcc 200187
>gb|AC151776.1| Ornithorhynchus anatinus chromosome UNK clone OABb-272A1, complete sequence Length = 126974 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 196 gaaaggggtcaagatggttg 215 |||||||||||||||||||| Sbjct: 45447 gaaaggggtcaagatggttg 45428
>ref|XM_550071.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2179 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 124 gcgcccgcgtcgccgccgccgacg 147 ||||||||| |||||||||||||| Sbjct: 131 gcgcccgcgccgccgccgccgacg 108
>ref|NM_190780.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1533 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 cgcccgcgtcgccgccgccg 144 |||||||||||||||||||| Sbjct: 156 cgcccgcgtcgccgccgccg 175
>ref|NM_191064.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1272 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 124 gcgcccgcgtcgccgccgccgacg 147 ||||||||| |||||||||||||| Sbjct: 980 gcgcccgcgacgccgccgccgacg 1003
>ref|NM_193374.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1992 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 125 cgcccgcgtcgccgccgccgacga 148 |||||||| ||||||||||||||| Sbjct: 457 cgcccgcgccgccgccgccgacga 434
>ref|XM_516046.1| PREDICTED: Pan troglodytes similar to hypothetical protein FLJ20309 (LOC459895), mRNA Length = 2707 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 265 tccggcttatgattgttaca 284 |||||||||||||||||||| Sbjct: 1430 tccggcttatgattgttaca 1411
>ref|XM_479183.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1161 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 cgccgccgccgacgagggcc 153 |||||||||||||||||||| Sbjct: 68 cgccgccgccgacgagggcc 87
>ref|XM_473839.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1374 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 128 ccgcgtcgccgccgccgacg 147 |||||||||||||||||||| Sbjct: 717 ccgcgtcgccgccgccgacg 736
>gb|AC119980.7| Mus musculus chromosome 8, clone RP24-495J19, complete sequence Length = 145150 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 gaattccctccccctccccc 39 |||||||||||||||||||| Sbjct: 24362 gaattccctccccctccccc 24381
>gb|AF550679.1| Escherichia coli plasmid p1658/97, complete sequence Length = 125491 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 gcacctcccgcccctgctcc 118 |||||||||||||||||||| Sbjct: 30048 gcacctcccgcccctgctcc 30029
>gb|DP000017.1| Sus scrofa target 1 genomic scaffold Length = 1471440 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 24 tccctccccctccccctcgg 43 |||||||||||||||||||| Sbjct: 1321513 tccctccccctccccctcgg 1321494
>gb|U01159.2| Escherichia coli F sex factor transfer region Length = 33359 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 gcacctcccgcccctgctcc 118 |||||||||||||||||||| Sbjct: 28036 gcacctcccgcccctgctcc 28017
>gb|AC123662.13| Mus musculus chromosome 5, clone RP23-213N8, complete sequence Length = 223267 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 attccctccccctccccctc 41 |||||||||||||||||||| Sbjct: 28067 attccctccccctccccctc 28086
>gb|AC102916.5| Mus musculus chromosome 5, clone RP24-274I18, complete sequence Length = 144142 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 attccctccccctccccctc 41 |||||||||||||||||||| Sbjct: 18516 attccctccccctccccctc 18497
>gb|AY458016.1| Escherichia coli plasmid pC15-1a, complete sequence Length = 92353 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 gcacctcccgcccctgctcc 118 |||||||||||||||||||| Sbjct: 79382 gcacctcccgcccctgctcc 79363
>ref|NG_000008.6| Homo sapiens cytochrome P450, family 2, subfamily A (CYP2A) on chromosome 19 Length = 413528 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 attccctccccctccccctc 41 |||||||||||||||||||| Sbjct: 169607 attccctccccctccccctc 169588
>ref|NM_015906.3| Homo sapiens tripartite motif-containing 33 (TRIM33), transcript variant a, mRNA Length = 8339 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 125 cgcccgcgtcgccgccgccg 144 |||||||||||||||||||| Sbjct: 42 cgcccgcgtcgccgccgccg 23
>ref|NM_033020.2| Homo sapiens tripartite motif-containing 33 (TRIM33), transcript variant b, mRNA Length = 8288 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 125 cgcccgcgtcgccgccgccg 144 |||||||||||||||||||| Sbjct: 42 cgcccgcgtcgccgccgccg 23
>gb|AC092497.2| Sus scrofa clone RP44-30C22, complete sequence Length = 172144 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 24 tccctccccctccccctcgg 43 |||||||||||||||||||| Sbjct: 22217 tccctccccctccccctcgg 22198
>gb|AC147329.2| Pan troglodytes BAC clone RP43-21F14 from 7, complete sequence Length = 189770 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 531 gtaatcttcttgagttgagg 550 |||||||||||||||||||| Sbjct: 647 gtaatcttcttgagttgagg 628
>gb|CP000051.1| Chlamydia trachomatis A/HAR-13, complete genome Length = 1044459 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 408 tgtatagtgaagcaaagctg 427 |||||||||||||||||||| Sbjct: 609798 tgtatagtgaagcaaagctg 609817
>gb|AY272055.2| Chlamydomonas reinhardtii chlamyopsin-5 gene, complete cds Length = 7966 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 185 tgcagcgggaggaaaggggt 204 |||||||||||||||||||| Sbjct: 3475 tgcagcgggaggaaaggggt 3494
>gb|AC102547.8| Mus musculus chromosome 7, clone RP23-134L4, complete sequence Length = 220452 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 23 ttccctccccctccccctcg 42 |||||||||||||||||||| Sbjct: 49988 ttccctccccctccccctcg 49969
>gb|AC163434.5| Mus musculus chromosome 7, clone RP23-320N24, complete sequence Length = 224337 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 ttccctccccctccccctcg 42 |||||||||||||||||||| Sbjct: 220997 ttccctccccctccccctcg 221016
>gb|AC145901.2| Pan troglodytes BAC clone RP43-9F20 from 7, complete sequence Length = 176187 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 531 gtaatcttcttgagttgagg 550 |||||||||||||||||||| Sbjct: 113812 gtaatcttcttgagttgagg 113831
>emb|CR956405.10| Pig DNA sequence from clone CH242-240K6 on chromosome 17, complete sequence Length = 135681 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 24 tccctccccctccccctcgg 43 |||||||||||||||||||| Sbjct: 97100 tccctccccctccccctcgg 97119
>gb|AY206447.1| Shigella flexneri plasmid pINV_F6_M1382 TrbH (trbH), MvpA (mvpA), and MvpT (mvpT) genes, complete cds; traI-like pseudogene, complete sequence; and TraX (traX) and FinO (finO) genes, complete cds Length = 7375 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 gcacctcccgcccctgctcc 118 |||||||||||||||||||| Sbjct: 2113 gcacctcccgcccctgctcc 2094
>gb|AC004548.1| Homo sapiens PAC clone RP5-1182N3 from 7, complete sequence Length = 105127 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 531 gtaatcttcttgagttgagg 550 |||||||||||||||||||| Sbjct: 92460 gtaatcttcttgagttgagg 92479
>gb|AC115752.8| Mus musculus chromosome 19, clone RP23-18M16, complete sequence Length = 214925 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 14 tcttttgaattccctccccctccc 37 |||||||| ||||||||||||||| Sbjct: 43384 tcttttgacttccctccccctccc 43361
>gb|AC104906.6| Mus musculus chromosome 10, clone RP24-374K6, complete sequence Length = 179312 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 attccctccccctccccctc 41 |||||||||||||||||||| Sbjct: 10837 attccctccccctccccctc 10818
>gb|CP000244.1| Escherichia coli UTI89 plasmid pUTI89, complete sequence Length = 114230 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 gcacctcccgcccctgctcc 118 |||||||||||||||||||| Sbjct: 106662 gcacctcccgcccctgctcc 106643
>emb|X66126.1|CTMIPL2 C.trachomatis (L2) gene for mip-like protein Length = 900 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 408 tgtatagtgaagcaaagctg 427 |||||||||||||||||||| Sbjct: 579 tgtatagtgaagcaaagctg 560
>emb|Z98950.1|HS507I15 Human DNA sequence from clone RP3-507I15 on chromosome Xq26.3-27.3 Contains a ribosomal protein L36a (RPL36A) pseudogene, complete sequence Length = 123556 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 286 gacagtggagctgaataggc 305 |||||||||||||||||||| Sbjct: 84364 gacagtggagctgaataggc 84345
>emb|AL390241.19| Human DNA sequence from clone RP11-343L14 on chromosome 1 Contains the 3' end of a ribosomal protein L26 (RPL26) pseudogene, a eukaryotic translation initiation factor 2 subunit 2 beta 38kDa (EIF2S2) pseudogene, the 5' end of the TRIM33 gene for tripartite motif-containing 33, a pyruvate kinase muscle (PKM2) pseudogene, the BCAS2 gene for breast carcinoma amplified sequence 2, the 3' end of the gene for a novel protein (FLJ37099) and a CpG island, complete sequence Length = 123501 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 cgcccgcgtcgccgccgccg 144 |||||||||||||||||||| Sbjct: 50938 cgcccgcgtcgccgccgccg 50957
>emb|AL390240.18| Human DNA sequence from clone RP11-428F18 on chromosome 9 Contains the TNFSF15 gene for tumor necrosis factor (ligand) superfamily, member 15 (TL1, VEG1), complete sequence Length = 93876 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 attccctccccctccccctc 41 |||||||||||||||||||| Sbjct: 86758 attccctccccctccccctc 86739
>emb|AL121830.25|HSJ718D20 Human DNA sequence from clone RP4-718D20 on chromosome 20 Contains part of the SLC24A3 gene for solute carrier family 24 (sodium/potassium/calcium exchanger) member 3, a novel gene and a CpG island, complete sequence Length = 87394 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 503 attgcaaaacacgaatctgagatt 526 ||||||||||| |||||||||||| Sbjct: 8919 attgcaaaacaagaatctgagatt 8896
>emb|AL050308.9|HSG164F24 Human DNA sequence from clone GS1-164F24 on chromosome Xq26.3-27.3 Contains a NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 3 (12kD, B12) (NDUFB3) pseudogene and part of a novel gene, complete sequence Length = 213084 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 286 gacagtggagctgaataggc 305 |||||||||||||||||||| Sbjct: 62759 gacagtggagctgaataggc 62778
>gb|AC175117.2| Mus musculus chromosome 3, clone wi1-709N8, complete sequence Length = 40863 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 277 ttgttacaagacagtggagc 296 |||||||||||||||||||| Sbjct: 23342 ttgttacaagacagtggagc 23323
>ref|XM_775289.1| PREDICTED: Strongylocentrotus purpuratus similar to SMAD specific E3 ubiquitin protein ligase 2 (LOC574887), mRNA Length = 1812 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 25 ccctccccctccccctcggtcgcc 48 ||||||||||||||||| |||||| Sbjct: 126 ccctccccctccccctctgtcgcc 103
>emb|X66128.1|CTMIPB C.trachomatis (B) gene for mip-like protein Length = 732 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 408 tgtatagtgaagcaaagctg 427 |||||||||||||||||||| Sbjct: 480 tgtatagtgaagcaaagctg 461
>emb|X66127.1|CTMIPE C.trachomatis (E) gene for mip-like protein Length = 732 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 408 tgtatagtgaagcaaagctg 427 |||||||||||||||||||| Sbjct: 480 tgtatagtgaagcaaagctg 461
>emb|X55815.1|ECR100TRA Plasmid R100 promoter-distal region of the tra operon including traI and traD genes Length = 12120 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 gcacctcccgcccctgctcc 118 |||||||||||||||||||| Sbjct: 4623 gcacctcccgcccctgctcc 4604
>emb|AL939128.1|SCO939128 Streptomyces coelicolor A3(2) complete genome; segment 25/29 Length = 296500 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 124 gcgcccgcgtcgccgccgccgacg 147 |||||||||||| ||||||||||| Sbjct: 76426 gcgcccgcgtcgtcgccgccgacg 76449
>emb|AL939118.1|SCO939118 Streptomyces coelicolor A3(2) complete genome; segment 15/29 Length = 303550 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 125 cgcccgcgtcgccgccgccgacga 148 ||||||||| |||||||||||||| Sbjct: 298372 cgcccgcgtagccgccgccgacga 298349
>emb|AL939115.1|SCO939115 Streptomyces coelicolor A3(2) complete genome; segment 12/29 Length = 276800 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 125 cgcccgcgtcgccgccgccg 144 |||||||||||||||||||| Sbjct: 335 cgcccgcgtcgccgccgccg 316
>emb|AL606691.4|OSJN00081 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0060N03, complete sequence Length = 179798 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 128 ccgcgtcgccgccgccgacg 147 |||||||||||||||||||| Sbjct: 172519 ccgcgtcgccgccgccgacg 172538
>emb|AL606684.3|OSJN00088 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0085I10, complete sequence Length = 150551 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 128 ccgcgtcgccgccgccgacg 147 |||||||||||||||||||| Sbjct: 2366 ccgcgtcgccgccgccgacg 2385
>emb|AL391753.1|SFPWR100 Shigella flexneri virulence plasmid pWR100: from 1 to 213494 Length = 213494 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 gcacctcccgcccctgctcc 118 |||||||||||||||||||| Sbjct: 193866 gcacctcccgcccctgctcc 193847
>dbj|AP003570.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0432B10 Length = 131918 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 124 gcgcccgcgtcgccgccgccgacg 147 ||||||||| |||||||||||||| Sbjct: 67864 gcgcccgcgacgccgccgccgacg 67887
>gb|AY119024.1| Drosophila melanogaster LP05023 full insert cDNA Length = 2269 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 136 ccgccgccgacgagggccag 155 |||||||||||||||||||| Sbjct: 1213 ccgccgccgacgagggccag 1232
>dbj|AP001918.1| Plasmid F genomic DNA, complete sequence Length = 99159 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 gcacctcccgcccctgctcc 118 |||||||||||||||||||| Sbjct: 94062 gcacctcccgcccctgctcc 94043
>gb|AC104428.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1123F12, complete sequence Length = 103330 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 127 cccgcgtcgccgccgccgac 146 |||||||||||||||||||| Sbjct: 50589 cccgcgtcgccgccgccgac 50608
>ref|NM_078670.2| Drosophila melanogaster Dynein heavy chain at 16F CG7092-RA (Dhc16F), mRNA Length = 12323 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 136 ccgccgccgacgagggccag 155 |||||||||||||||||||| Sbjct: 11300 ccgccgccgacgagggccag 11319
>gb|DQ381420.1| Escherichia coli plasmid pAPEC-O1-ColBM, complete sequence Length = 174241 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 gcacctcccgcccctgctcc 118 |||||||||||||||||||| Sbjct: 45947 gcacctcccgcccctgctcc 45928
>gb|AC011614.8| Drosophila melanogaster, chromosome X, region 16F-17A, BAC clone BACR48L05, complete sequence Length = 177138 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 136 ccgccgccgacgagggccag 155 |||||||||||||||||||| Sbjct: 161164 ccgccgccgacgagggccag 161145
>gb|AC156951.7| Mus musculus 6 BAC RP24-339D12 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 142364 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 attccctccccctccccctc 41 |||||||||||||||||||| Sbjct: 141119 attccctccccctccccctc 141138
>gb|AC151294.3| Mus musculus BAC clone RP23-137I7 from chromosome 17, complete sequence Length = 206868 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 25 ccctccccctccccctcggt 44 |||||||||||||||||||| Sbjct: 115461 ccctccccctccccctcggt 115480
>gb|AC011541.7| Homo sapiens chromosome 19 clone LLNLR-258F7, complete sequence Length = 39944 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 attccctccccctccccctc 41 |||||||||||||||||||| Sbjct: 13902 attccctccccctccccctc 13883
>gb|AC159468.4| Mus musculus 10 BAC RP23-335A3 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 214532 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 attccctccccctccccctc 41 |||||||||||||||||||| Sbjct: 166650 attccctccccctccccctc 166631
>gb|AC155720.7| Mus musculus 6 BAC RP24-151P23 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 210211 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 attccctccccctccccctc 41 |||||||||||||||||||| Sbjct: 29093 attccctccccctccccctc 29112
>gb|AF348706.1|AF348706 Shigella flexneri large virulence plasmid pWR501, complete plasmid sequence Length = 221851 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 gcacctcccgcccctgctcc 118 |||||||||||||||||||| Sbjct: 191554 gcacctcccgcccctgctcc 191535
>gb|AC012163.13|AC012163 Drosophila melanogaster, chromosome X, region 16F-16F, BAC clone BACR17D02, complete sequence Length = 186748 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 136 ccgccgccgacgagggccag 155 |||||||||||||||||||| Sbjct: 169498 ccgccgccgacgagggccag 169517
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 134 cgccgccgccgacgagggcc 153 |||||||||||||||||||| Sbjct: 25595514 cgccgccgccgacgagggcc 25595495 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 131 cgtcgccgccgccgacgagg 150 |||||||||||||||||||| Sbjct: 17445198 cgtcgccgccgccgacgagg 17445217
>gb|AC158224.6| Mus musculus chromosome 7, clone RP23-103H3, complete sequence Length = 224545 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 ttccctccccctccccctcg 42 |||||||||||||||||||| Sbjct: 73995 ttccctccccctccccctcg 74014
>gb|U82621.1|SFU82621 Shigella flexneri plasmid pMYSH6000, MsbB homolog (msbB) gene, partial cds, hypothetical protein gene, complete cds, TraD homolog (traD) pseudogene, parital sequence, TrbH homolog (trbH), putative STBORF2 (stborf2) and putative STBORF1 (stborf1) genes, complete cds, and traI pseudogene, partial sequence Length = 5430 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 gcacctcccgcccctgctcc 118 |||||||||||||||||||| Sbjct: 5296 gcacctcccgcccctgctcc 5277
>dbj|AP004614.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0042P21 Length = 141230 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 125 cgcccgcgtcgccgccgccgacga 148 |||||||| ||||||||||||||| Sbjct: 121018 cgcccgcgccgccgccgccgacga 121041
>dbj|AP004331.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0085D07 Length = 172483 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 124 gcgcccgcgtcgccgccgccgacg 147 ||||||||| |||||||||||||| Sbjct: 22587 gcgcccgcgacgccgccgccgacg 22610
>ref|XM_342524.2| PREDICTED: Rattus norvegicus phospholipase C, beta 1 (Plcb1), mRNA Length = 7198 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 96 tccgcacctcccgcccctgctccg 119 ||||| |||||||||||||||||| Sbjct: 73 tccgctcctcccgcccctgctccg 50
>gb|AC156599.2| Laccaria bicolor clone JGIAHZW-3X, complete sequence Length = 44441 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 attccctccccctccccctc 41 |||||||||||||||||||| Sbjct: 43465 attccctccccctccccctc 43446
>dbj|AP003286.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0677H08 Length = 178830 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 125 cgcccgcgtcgccgccgccg 144 |||||||||||||||||||| Sbjct: 137644 cgcccgcgtcgccgccgccg 137625
>dbj|AP003235.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0039A07 Length = 148892 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 125 cgcccgcgtcgccgccgccg 144 |||||||||||||||||||| Sbjct: 5471 cgcccgcgtcgccgccgccg 5452
>gb|AE001273.1| Chlamydia trachomatis D/UW-3/CX, complete genome Length = 1042519 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 408 tgtatagtgaagcaaagctg 427 |||||||||||||||||||| Sbjct: 607090 tgtatagtgaagcaaagctg 607109
>dbj|AP004380.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0594D10 Length = 143200 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 134 cgccgccgccgacgagggcc 153 |||||||||||||||||||| Sbjct: 49487 cgccgccgccgacgagggcc 49468
>dbj|AP004299.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0434A03 Length = 146505 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 131 cgtcgccgccgccgacgagg 150 |||||||||||||||||||| Sbjct: 113422 cgtcgccgccgccgacgagg 113441
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 41 cggtcgcctcgccgccgacggagg 64 ||||||||||| |||||||||||| Sbjct: 5420350 cggtcgcctcggcgccgacggagg 5420327
>dbj|AP003247.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0425G02 Length = 155432 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 124 gcgcccgcgtcgccgccgccgacg 147 ||||||||| |||||||||||||| Sbjct: 146289 gcgcccgcgacgccgccgccgacg 146312
>dbj|AP002913.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0480E02 Length = 141862 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 124 gcgcccgcgtcgccgccgccgacg 147 ||||||||| |||||||||||||| Sbjct: 7153 gcgcccgcgccgccgccgccgacg 7176
>dbj|AP005864.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0047P18 Length = 169128 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 attccctccccctccccctc 41 |||||||||||||||||||| Sbjct: 20208 attccctccccctccccctc 20227
>dbj|AB022210.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K16E1 Length = 33963 Score = 40.1 bits (20), Expect = 8.3 Identities = 59/72 (81%) Strand = Plus / Plus Query: 272 tatgattgttacaagacagtggagctgaataggcctgagattgagcagttgcggttctgg 331 ||||| ||||||||||| || || |||||||||||| || ||||| | || || ||| Sbjct: 8721 tatgaatgttacaagactgttgaaaagaataggcctgaaatcgagcaacttcgcttttgg 8780 Query: 332 tgtcagtactgg 343 |||||||||||| Sbjct: 8781 tgtcagtactgg 8792
>dbj|AK099524.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013030K11, full insert sequence Length = 1160 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 cgccgccgccgacgagggcc 153 |||||||||||||||||||| Sbjct: 67 cgccgccgccgacgagggcc 86
>dbj|AK099060.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013157I01, full insert sequence Length = 2504 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 124 gcgcccgcgtcgccgccgccgacg 147 ||||||||| |||||||||||||| Sbjct: 132 gcgcccgcgccgccgccgccgacg 109
>dbj|AK098894.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001N23, full insert sequence Length = 2578 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 124 gcgcccgcgtcgccgccgccgacg 147 ||||||||| |||||||||||||| Sbjct: 131 gcgcccgcgccgccgccgccgacg 108
>dbj|AK098852.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000H09, full insert sequence Length = 2579 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 124 gcgcccgcgtcgccgccgccgacg 147 ||||||||| |||||||||||||| Sbjct: 133 gcgcccgcgccgccgccgccgacg 110
>dbj|AK071382.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023091N20, full insert sequence Length = 4120 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 131 cgtcgccgccgccgacgagg 150 |||||||||||||||||||| Sbjct: 131 cgtcgccgccgccgacgagg 150
>dbj|AK065080.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001L07, full insert sequence Length = 2610 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 124 gcgcccgcgtcgccgccgccgacg 147 ||||||||| |||||||||||||| Sbjct: 164 gcgcccgcgccgccgccgccgacg 141
>emb|AL442105.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0702G05, complete sequence Length = 134586 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 128 ccgcgtcgccgccgccgacg 147 |||||||||||||||||||| Sbjct: 81992 ccgcgtcgccgccgccgacg 82011
>gb|L14323.2|RATPHOSPHB Rattus norvegicus phospholipase C-beta1b mRNA, complete sequence Length = 7204 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 96 tccgcacctcccgcccctgctccg 119 ||||| |||||||||||||||||| Sbjct: 73 tccgctcctcccgcccctgctccg 50
>gb|AE003507.3| Drosophila melanogaster chromosome X, section 59 of 74 of the complete sequence Length = 299804 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 136 ccgccgccgacgagggccag 155 |||||||||||||||||||| Sbjct: 224671 ccgccgccgacgagggccag 224690
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 124 gcgcccgcgtcgccgccgcc 143 |||||||||||||||||||| Sbjct: 1987995 gcgcccgcgtcgccgccgcc 1988014
>gb|AY879342.1| Shigella flexneri plasmid pSF5, complete sequence Length = 136694 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 99 gcacctcccgcccctgctcc 118 |||||||||||||||||||| Sbjct: 55619 gcacctcccgcccctgctcc 55638
>emb|AL772305.15| Mouse DNA sequence from clone RP23-86E8 on chromosome 4, complete sequence Length = 260935 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 attccctccccctccccctc 41 |||||||||||||||||||| Sbjct: 105149 attccctccccctccccctc 105168
>emb|AL954852.5|CNS08CD6 Oryza sativa chromosome 12, . BAC OJ1573_A06 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 143895 Score = 40.1 bits (20), Expect = 8.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 31 ccctccccctcggtcgcctcgccgccga 58 |||||||||||||||| | ||||||||| Sbjct: 82772 ccctccccctcggtcgacgcgccgccga 82799
>gb|AY285339.1| Sus scrofa clone UMNp1219.gcg microsatellite sequence Length = 643 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 24 tccctccccctccccctcgg 43 |||||||||||||||||||| Sbjct: 271 tccctccccctccccctcgg 290
>gb|M54796.1|FPLTRAID Plasmid F (from E.coli) helicase I (traI) gene, complete cds and traD gene product, 3' end Length = 6881 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 gcacctcccgcccctgctcc 118 |||||||||||||||||||| Sbjct: 2876 gcacctcccgcccctgctcc 2857
>emb|AL840635.6| Mouse DNA sequence from clone RP23-418D21 on chromosome 2, complete sequence Length = 201328 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 96 tccgcacctcccgcccctgctccg 119 ||||| |||||||||||||||||| Sbjct: 28355 tccgctcctcccgcccctgctccg 28332
>gb|AC073405.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0036D10, complete sequence Length = 156772 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 23 ttccctccccctccccctcg 42 |||||||||||||||||||| Sbjct: 15097 ttccctccccctccccctcg 15078
>gb|AC152969.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0098I11, complete sequence Length = 122970 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 23 ttccctccccctccccctcg 42 |||||||||||||||||||| Sbjct: 24326 ttccctccccctccccctcg 24307
>gb|CP000037.1| Shigella boydii Sb227 plasmid pSB4_227, complete sequence Length = 126697 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 gcacctcccgcccctgctcc 118 |||||||||||||||||||| Sbjct: 104323 gcacctcccgcccctgctcc 104304
>gb|M20636.1|RATPLC1A Rat phospholipase C-1 mRNA, complete cds Length = 5217 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 96 tccgcacctcccgcccctgctccg 119 ||||| |||||||||||||||||| Sbjct: 103 tccgctcctcccgcccctgctccg 80
>gb|CP000039.1| Shigella sonnei Ss046 plasmid pSS_046, complete sequence Length = 214396 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 gcacctcccgcccctgctcc 118 |||||||||||||||||||| Sbjct: 170731 gcacctcccgcccctgctcc 170712
>dbj|AP000342.1| Plasmid R100 DNA, complete sequence Length = 94281 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 gcacctcccgcccctgctcc 118 |||||||||||||||||||| Sbjct: 79855 gcacctcccgcccctgctcc 79836 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,708,033 Number of Sequences: 3902068 Number of extensions: 5708033 Number of successful extensions: 177708 Number of sequences better than 10.0: 164 Number of HSP's better than 10.0 without gapping: 172 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 173254 Number of HSP's gapped (non-prelim): 4452 length of query: 611 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 588 effective length of database: 17,143,297,704 effective search space: 10080259049952 effective search space used: 10080259049952 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
