Clone Information

BLAST Search Result

Clone Name	bart46a03
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	RS6_ASPOF (Q9M3V8) 40S ribosomal protein S6	269	5e-72
2	RS6B_ARATH (P51430) 40S ribosomal protein S6-2	266	3e-71
3	RS6A_ARATH (O48549) 40S ribosomal protein S6-1	266	3e-71
4	RS6_RAT (P62755) 40S ribosomal protein S6	194	1e-49
5	RS6_MOUSE (P62754) 40S ribosomal protein S6 (Phosphoprotein NP33)	194	1e-49
6	RS6_HUMAN (P62753) 40S ribosomal protein S6 (Phosphoprotein NP33)	194	1e-49
7	RS6_CHICK (P47838) 40S ribosomal protein S6	191	1e-48
8	RS6_ICTPU (Q90YR8) 40S ribosomal protein S6	190	2e-48
9	RS6_XENLA (P39017) 40S ribosomal protein S6	188	1e-47
10	RS6_ONCMY (Q9YGF2) 40S ribosomal protein S6	188	1e-47
11	RS6_APLCA (Q9BMX5) 40S ribosomal protein S6	187	3e-47
12	RS6_BRAFL (O01727) 40S ribosomal protein S6	187	3e-47
13	RS6_AEDAE (Q9U761) 40S ribosomal protein S6	181	2e-45
14	RS6_AEDAL (Q9U762) 40S ribosomal protein S6	178	9e-45
15	RS6_MANSE (Q94624) 40S ribosomal protein S6	177	2e-44
16	RS6_DROME (P29327) 40S ribosomal protein S6	177	3e-44
17	RS6_SPOFR (Q95V32) 40S ribosomal protein S6	175	8e-44
18	RS6_CAEEL (Q9NEN6) 40S ribosomal protein S6	174	2e-43
19	RS6B_SCHPO (Q9C0Z7) 40S ribosomal protein S6-B	173	4e-43
20	RS6A_SCHPO (P05752) 40S ribosomal protein S6-A	172	5e-43
21	RS6_DEBHA (Q6BXH8) 40S ribosomal protein S6	166	4e-41
22	RS6_YARLI (Q6C169) 40S ribosomal protein S6	165	8e-41
23	RS6_CANGA (Q6FJH3) 40S ribosomal protein S6	165	8e-41
24	RS6_YEAST (P02365) 40S ribosomal protein S6 (S10) (YS4) (RP9)	164	2e-40
25	RS6_KLUMA (P41798) 40S ribosomal protein S6 (Ribosomal protein S10)	163	4e-40
26	RS6_ASHGO (Q74ZK3) 40S ribosomal protein S6	162	7e-40
27	RS6_TOBAC (P29345) 40S ribosomal protein S6 (Fragment)	160	3e-39
28	RS6_KLULA (Q6CM04) 40S ribosomal protein S6	160	3e-39
29	RS6_LEIMA (Q9NE83) 40S ribosomal protein S6	142	7e-34
30	RS6_LEIIN (O44012) 40S ribosomal protein S6	139	5e-33
31	RS6_ENCCU (Q8SRY0) 40S ribosomal protein S6	88	2e-17
32	RS6E_PYRKO (Q5JDK8) 30S ribosomal protein S6e	54	4e-07
33	RS6E_METKA (Q8TVE6) 30S ribosomal protein S6e	54	4e-07
34	RS6E_PYRAB (Q9UYS3) 30S ribosomal protein S6e	53	6e-07
35	RS6E_METJA (P54067) 30S ribosomal protein S6e	52	1e-06
36	RS6E_METTH (O26360) 30S ribosomal protein S6e	52	2e-06
37	RS6E_PYRFU (Q8U3H8) 30S ribosomal protein S6e	51	2e-06
38	RS6E_PYRHO (O58349) 30S ribosomal protein S6e	48	2e-05
39	RS6E_PICTO (Q6L1H6) 30S ribosomal protein S6e	45	2e-04
40	RS6E_THEAC (Q9HLA6) 30S ribosomal protein S6e	43	8e-04
41	RS6E_NANEQ (Q74MJ5) 30S ribosomal protein S6e	42	0.002
42	RS6E_ARCFU (O29739) 30S ribosomal protein S6e	41	0.003
43	RS6E_HALSA (Q9HMJ5) 30S ribosomal protein S6e	39	0.011
44	RS6E_METAC (Q8TQL4) 30S ribosomal protein S6e	38	0.019
45	RS6E_AERPE (Q9Y9B6) 30S ribosomal protein S6e	37	0.043
46	RS6E_METMA (Q8PU79) 30S ribosomal protein S6e	37	0.056
47	RS6E_SULTO (Q975N7) 30S ribosomal protein S6e	37	0.056
48	BAG3_HUMAN (O95817) BAG family molecular chaperone regulator 3 (...	35	0.16
49	BAG3_MOUSE (Q9JLV1) BAG family molecular chaperone regulator 3 (...	34	0.37
50	RS6E_SULSO (Q980A6) 30S ribosomal protein S6e	33	0.48
51	CX017_MOUSE (Q8C3F2) Protein CXorf17 homolog	33	0.48
52	ETS6_DROME (P29776) DNA-binding protein D-ETS-6	32	1.8
53	RS6E_HALMA (P21509) 30S ribosomal protein S6e (HS13)	32	1.8
54	RPGF6_HUMAN (Q8TEU7) Rap guanine nucleotide exchange factor 6 (P...	31	3.1
55	SL9A5_RAT (Q9Z0X2) Sodium/hydrogen exchanger 5 (Na(+)/H(+) excha...	30	4.0
56	DNPEP_CAEEL (Q19087) Putative aspartyl aminopeptidase (EC 3.4.11...	30	5.3
57	SMI1_CANGA (Q6FL35) KNR4/SMI1 homolog	30	5.3
58	HRPX_PLALO (P04929) Histidine-rich glycoprotein precursor	30	6.9
59	CX017_HUMAN (Q9NX05) Protein CXorf17 (Tumor antigen BJ-HCC-21)	30	6.9
60	Y1923_STRMU (Q8DS88) UPF0168 protein SMU.1923c	30	6.9
61	STB3_YEAST (Q12427) Protein STB3 (SIN3-binding protein 3)	29	9.0
62	SMC4_YEAST (Q12267) Structural maintenance of chromosome 4	29	9.0
63	MARH4_MOUSE (Q80TE3) Membrane-associated RING finger protein 4 (...	29	9.0

>RS6_ASPOF (Q9M3V8) 40S ribosomal protein S6|
          Length = 251

 Score =  269 bits (687), Expect = 5e-72
 Identities = 132/165 (80%), Positives = 138/165 (83%)
 Frame = +2

Query: 101 MKLSIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFKIMGGCDKQG 280
           MK +IANPTTGCQKK+EIDDDQKLR  YDKRISQEV GD LGEEFKGY+FKIMGGCDKQG
Sbjct: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFYDKRISQEVSGDALGEEFKGYVFKIMGGCDKQG 60

Query: 281 FPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGE 460
           FPMKQGVLT GRVRLLLHRGTPCF                 CIVS DLSV+NLVIVKKGE
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGE 120

Query: 461 NDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRSYVNTYRRT 595
           NDLPGLTD EKPRMRGPKRASKI+KLFNL K+DDVR YVNTYRRT
Sbjct: 121 NDLPGLTDVEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRT 165

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>RS6B_ARATH (P51430) 40S ribosomal protein S6-2|
          Length = 249

 Score =  266 bits (680), Expect = 3e-71
 Identities = 129/165 (78%), Positives = 139/165 (84%)
 Frame = +2

Query: 101 MKLSIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFKIMGGCDKQG 280
           MK ++ANPTTGCQKK+EIDDDQKLR  +DKR+SQEV GD LGEEFKGY+FKIMGGCDKQG
Sbjct: 1   MKFNVANPTTGCQKKLEIDDDQKLRAFFDKRLSQEVSGDALGEEFKGYVFKIMGGCDKQG 60

Query: 281 FPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGE 460
           FPMKQGVLT GRVRLLLHRGTPCF                 CIVS DLSV+NLVIVKKG 
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGHGRRTGERRRKSVRGCIVSPDLSVLNLVIVKKGV 120

Query: 461 NDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRSYVNTYRRT 595
           +DLPGLTDTEKPRMRGPKRASKI+KLFNLGK+DDVR YVNTYRRT
Sbjct: 121 SDLPGLTDTEKPRMRGPKRASKIRKLFNLGKEDDVRKYVNTYRRT 165

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>RS6A_ARATH (O48549) 40S ribosomal protein S6-1|
          Length = 250

 Score =  266 bits (680), Expect = 3e-71
 Identities = 130/164 (79%), Positives = 138/164 (84%)
 Frame = +2

Query: 101 MKLSIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFKIMGGCDKQG 280
           MK ++ANPTTGCQKK+EIDDDQKLR  YDKRISQEV GD LGEEFKGY+FKI GGCDKQG
Sbjct: 1   MKFNVANPTTGCQKKLEIDDDQKLRAFYDKRISQEVSGDALGEEFKGYVFKIKGGCDKQG 60

Query: 281 FPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGE 460
           FPMKQGVLT GRVRLLLHRGTPCF                 CIVS DLSV+NLVIVKKGE
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGHGRRTGERRRKSVRGCIVSPDLSVLNLVIVKKGE 120

Query: 461 NDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRSYVNTYRR 592
           NDLPGLTDTEKPRMRGPKRASKI+KLFNL K+DDVR+YVNTYRR
Sbjct: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLKKEDDVRTYVNTYRR 164

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>RS6_RAT (P62755) 40S ribosomal protein S6|
          Length = 249

 Score =  194 bits (494), Expect = 1e-49
 Identities = 97/159 (61%), Positives = 117/159 (73%)
 Frame = +2

Query: 101 MKLSIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFKIMGGCDKQG 280
           MKL+I+ P TGCQK +E+DD++KLR  Y+KR++ EV  D LGEE+KGY+ +I GG DKQG
Sbjct: 1   MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQG 60

Query: 281 FPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGE 460
           FPMKQGVLT GRVRLLL +G  C+                 CIV  +LSV+NLVIVKKGE
Sbjct: 61  FPMKQGVLTHGRVRLLLSKGHSCY--RPRRTGERKRKSVRGCIVDANLSVLNLVIVKKGE 118

Query: 461 NDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRSYV 577
            D+PGLTDT  PR  GPKRAS+I+KLFNL K+DDVR YV
Sbjct: 119 KDIPGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYV 157

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>RS6_MOUSE (P62754) 40S ribosomal protein S6 (Phosphoprotein NP33)|
          Length = 249

 Score =  194 bits (494), Expect = 1e-49
 Identities = 97/159 (61%), Positives = 117/159 (73%)
 Frame = +2

Query: 101 MKLSIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFKIMGGCDKQG 280
           MKL+I+ P TGCQK +E+DD++KLR  Y+KR++ EV  D LGEE+KGY+ +I GG DKQG
Sbjct: 1   MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQG 60

Query: 281 FPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGE 460
           FPMKQGVLT GRVRLLL +G  C+                 CIV  +LSV+NLVIVKKGE
Sbjct: 61  FPMKQGVLTHGRVRLLLSKGHSCY--RPRRTGERKRKSVRGCIVDANLSVLNLVIVKKGE 118

Query: 461 NDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRSYV 577
            D+PGLTDT  PR  GPKRAS+I+KLFNL K+DDVR YV
Sbjct: 119 KDIPGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYV 157

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>RS6_HUMAN (P62753) 40S ribosomal protein S6 (Phosphoprotein NP33)|
          Length = 249

 Score =  194 bits (494), Expect = 1e-49
 Identities = 97/159 (61%), Positives = 117/159 (73%)
 Frame = +2

Query: 101 MKLSIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFKIMGGCDKQG 280
           MKL+I+ P TGCQK +E+DD++KLR  Y+KR++ EV  D LGEE+KGY+ +I GG DKQG
Sbjct: 1   MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQG 60

Query: 281 FPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGE 460
           FPMKQGVLT GRVRLLL +G  C+                 CIV  +LSV+NLVIVKKGE
Sbjct: 61  FPMKQGVLTHGRVRLLLSKGHSCY--RPRRTGERKRKSVRGCIVDANLSVLNLVIVKKGE 118

Query: 461 NDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRSYV 577
            D+PGLTDT  PR  GPKRAS+I+KLFNL K+DDVR YV
Sbjct: 119 KDIPGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYV 157

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>RS6_CHICK (P47838) 40S ribosomal protein S6|
          Length = 249

 Score =  191 bits (485), Expect = 1e-48
 Identities = 95/159 (59%), Positives = 116/159 (72%)
 Frame = +2

Query: 101 MKLSIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFKIMGGCDKQG 280
           MKL+I+ P TGCQK +E+DD++ +R  Y+KR++ EV  D LGEE+KGY+ +I GG DKQG
Sbjct: 1   MKLNISFPATGCQKLIEVDDERNVRTFYEKRMATEVAADSLGEEWKGYVVRISGGNDKQG 60

Query: 281 FPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGE 460
           FPMKQGVLT GRVRLLL +G  C+                 CIV  +LSV+NLVIVKKGE
Sbjct: 61  FPMKQGVLTHGRVRLLLSKGHSCY--RPRRTGERKRKSVRGCIVDANLSVLNLVIVKKGE 118

Query: 461 NDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRSYV 577
            D+PGLTDT  PR  GPKRAS+I+KLFNL K+DDVR YV
Sbjct: 119 KDIPGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYV 157

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>RS6_ICTPU (Q90YR8) 40S ribosomal protein S6|
          Length = 249

 Score =  190 bits (483), Expect = 2e-48
 Identities = 93/159 (58%), Positives = 118/159 (74%)
 Frame = +2

Query: 101 MKLSIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFKIMGGCDKQG 280
           MKL+I+ P TGCQK +E+DD++KLR  Y+KR++ EV  D LG+E+KGY+ +I GG DKQG
Sbjct: 1   MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADPLGDEWKGYVVRISGGNDKQG 60

Query: 281 FPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGE 460
           FPMKQGVLT+GRVRLLL +G  C+                 CIV  +LSV+NLVI++KGE
Sbjct: 61  FPMKQGVLTNGRVRLLLSKGHSCY--RPRRTGERKRKSVRGCIVDANLSVLNLVIIRKGE 118

Query: 461 NDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRSYV 577
            D+PGLTD+  PR  GPKRAS+I+KLFNL K+DDVR YV
Sbjct: 119 KDIPGLTDSTVPRRLGPKRASRIRKLFNLSKEDDVRQYV 157

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>RS6_XENLA (P39017) 40S ribosomal protein S6|
          Length = 249

 Score =  188 bits (477), Expect = 1e-47
 Identities = 93/159 (58%), Positives = 116/159 (72%)
 Frame = +2

Query: 101 MKLSIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFKIMGGCDKQG 280
           MKL+I+ P TGCQK +E++D++KLR  Y+KR++ EV  D LG+E+KGY+ +I GG DKQG
Sbjct: 1   MKLNISFPATGCQKLIEVEDERKLRTFYEKRMATEVAADPLGDEWKGYVVRISGGNDKQG 60

Query: 281 FPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGE 460
           FPMKQGVLT GRVRLLL +G  C+                 CIV  +LSV+NLVIV+KGE
Sbjct: 61  FPMKQGVLTHGRVRLLLSKGHSCY--RPRRTGERKRKSVRGCIVDANLSVLNLVIVRKGE 118

Query: 461 NDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRSYV 577
            D+PGLTD   PR  GPKRAS+I+KLFNL K+DDVR YV
Sbjct: 119 KDIPGLTDNTVPRRLGPKRASRIRKLFNLSKEDDVRQYV 157

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>RS6_ONCMY (Q9YGF2) 40S ribosomal protein S6|
          Length = 249

 Score =  188 bits (477), Expect = 1e-47
 Identities = 94/159 (59%), Positives = 116/159 (72%)
 Frame = +2

Query: 101 MKLSIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFKIMGGCDKQG 280
           MKL+I+ P TGCQK +E+DD++KLR  Y+KR++ EV  D LG+E+KGY+ +I GG DKQG
Sbjct: 1   MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADPLGDEWKGYMVRISGGNDKQG 60

Query: 281 FPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGE 460
           FPMKQGVLT GRVRLLL +G  C+                 CI   +LSV+NLVI+KKGE
Sbjct: 61  FPMKQGVLTHGRVRLLLAKGHSCY--RPRRTGERKRKSVRGCIGDANLSVLNLVIIKKGE 118

Query: 461 NDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRSYV 577
            D+PGLTD+  PR  GPKRASKI+KLFNL K+DDVR YV
Sbjct: 119 KDIPGLTDSTVPRRLGPKRASKIRKLFNLAKEDDVRQYV 157

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>RS6_APLCA (Q9BMX5) 40S ribosomal protein S6|
          Length = 247

 Score =  187 bits (474), Expect = 3e-47
 Identities = 94/159 (59%), Positives = 115/159 (72%)
 Frame = +2

Query: 101 MKLSIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFKIMGGCDKQG 280
           MKL+I+ P TGCQK +E+DD++KLR  YDKRIS E+  D LG+E+KGY+ +I GG DKQG
Sbjct: 1   MKLNISYPATGCQKLIEVDDEKKLRPFYDKRISAELSADCLGDEWKGYVVRISGGNDKQG 60

Query: 281 FPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGE 460
           FPMKQGVLT+ RVRLLL +   C+                 CIV  +LSV++LVI+KKGE
Sbjct: 61  FPMKQGVLTATRVRLLLDKNHSCY--RPRRTGERKRKSVRGCIVDSNLSVLSLVIIKKGE 118

Query: 461 NDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRSYV 577
            D+PGLTD   PR  GPKRASKI+KLFNL K+DDVR YV
Sbjct: 119 QDIPGLTDKTIPRRLGPKRASKIRKLFNLSKEDDVRQYV 157

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>RS6_BRAFL (O01727) 40S ribosomal protein S6|
          Length = 244

 Score =  187 bits (474), Expect = 3e-47
 Identities = 91/159 (57%), Positives = 117/159 (73%)
 Frame = +2

Query: 101 MKLSIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFKIMGGCDKQG 280
           MK++I+ P TGCQK +E+DD++KLR  Y+KR+S ++  + LG+E+KGY+ +I GG DKQG
Sbjct: 1   MKINISYPATGCQKLIEVDDERKLRPFYEKRMSHQMTAESLGDEWKGYLVRISGGNDKQG 60

Query: 281 FPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGE 460
           FPMKQGVLT+GRVRLLL +G  C+                 CIV  +LSV+NLVI+KKGE
Sbjct: 61  FPMKQGVLTNGRVRLLLGKGHSCY--RPRRTGERKRKSVRGCIVDSNLSVLNLVILKKGE 118

Query: 461 NDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRSYV 577
            D+PGLTDT  PR  GPKRA +I+KLFNL K+DDVR YV
Sbjct: 119 QDIPGLTDTTIPRRLGPKRAGRIRKLFNLNKEDDVRQYV 157

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>RS6_AEDAE (Q9U761) 40S ribosomal protein S6|
          Length = 346

 Score =  181 bits (458), Expect = 2e-45
 Identities = 90/159 (56%), Positives = 112/159 (70%)
 Frame = +2

Query: 101 MKLSIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFKIMGGCDKQG 280
           MKL+++ P TG QK  E+ DD KLR+ YDKR+  E+  D LG+E+KGY+FKI GG DKQG
Sbjct: 1   MKLNVSFPATGAQKTFEVMDDHKLRHFYDKRMGAEITADHLGDEWKGYVFKIAGGNDKQG 60

Query: 281 FPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGE 460
           FPMKQGVLT+ RVRLLL +G  C+                 CIV Q+LS + L++VKKGE
Sbjct: 61  FPMKQGVLTNTRVRLLLKKGHSCY--RPRRTGERKRKSVRGCIVDQNLSALALIVVKKGE 118

Query: 461 NDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRSYV 577
            D+PGLTDT  PR  GPKRAS I+KL+NL K+DDVR +V
Sbjct: 119 KDIPGLTDTTVPRRLGPKRASNIRKLYNLTKEDDVRQFV 157

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>RS6_AEDAL (Q9U762) 40S ribosomal protein S6|
          Length = 349

 Score =  178 bits (452), Expect = 9e-45
 Identities = 90/159 (56%), Positives = 111/159 (69%)
 Frame = +2

Query: 101 MKLSIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFKIMGGCDKQG 280
           MKL+++ P TG QK  E+ DD KLR+ YDKR+  E+  D LG+E+KGY+FKI GG DKQG
Sbjct: 1   MKLNVSFPATGAQKTFEVMDDHKLRHFYDKRMGAEITADHLGDEWKGYVFKIAGGNDKQG 60

Query: 281 FPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGE 460
           FPMKQGVLT+ RVRLLL +G  C+                 CIV Q+LS + L++VKKGE
Sbjct: 61  FPMKQGVLTNTRVRLLLKKGHSCY--RPRRTGERKRKSVRGCIVDQNLSALALIVVKKGE 118

Query: 461 NDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRSYV 577
            D+PGLTDT   R  GPKRAS I+KL+NL K+DDVR YV
Sbjct: 119 KDIPGLTDTTVLRRLGPKRASNIRKLYNLTKEDDVRQYV 157

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>RS6_MANSE (Q94624) 40S ribosomal protein S6|
          Length = 253

 Score =  177 bits (449), Expect = 2e-44
 Identities = 89/159 (55%), Positives = 112/159 (70%)
 Frame = +2

Query: 101 MKLSIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFKIMGGCDKQG 280
           MKL+++ P TGCQK  E+ D+ KLR  Y+KR+  EV  DLLG+E+KGY+ ++ GG DKQG
Sbjct: 1   MKLNVSFPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADLLGDEWKGYVLRVAGGNDKQG 60

Query: 281 FPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGE 460
           FPMKQGVLT+ RVRLL+ +G  C+                 CIV  +LSV+ LVIV+KGE
Sbjct: 61  FPMKQGVLTNSRVRLLMSKGHSCY--RPRRDGERKRKSVRGCIVDANLSVLALVIVRKGE 118

Query: 461 NDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRSYV 577
            ++PGLTD   PR  GPKRASKI+KLFNL K+DDVR YV
Sbjct: 119 QEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYV 157

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>RS6_DROME (P29327) 40S ribosomal protein S6|
          Length = 248

 Score =  177 bits (448), Expect = 3e-44
 Identities = 89/159 (55%), Positives = 112/159 (70%)
 Frame = +2

Query: 101 MKLSIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFKIMGGCDKQG 280
           MKL+++ P TGCQK  E+ D+ KLR  Y+KR+ Q V  D+LG+E+KGY  +I GG DKQG
Sbjct: 1   MKLNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQG 60

Query: 281 FPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGE 460
           FPMKQGVLT GRVRLLL +G  C+                 CIV  ++SV+ LV++KKGE
Sbjct: 61  FPMKQGVLTHGRVRLLLKKGHSCY--RPRRTGERKRKSVRGCIVDANMSVLALVVLKKGE 118

Query: 461 NDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRSYV 577
            D+PGLTDT  PR  GPKRASKI+KL+NL K+DDVR +V
Sbjct: 119 KDIPGLTDTTIPRRLGPKRASKIRKLYNLSKEDDVRRFV 157

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>RS6_SPOFR (Q95V32) 40S ribosomal protein S6|
          Length = 253

 Score =  175 bits (444), Expect = 8e-44
 Identities = 89/159 (55%), Positives = 111/159 (69%)
 Frame = +2

Query: 101 MKLSIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFKIMGGCDKQG 280
           MKL+++ P TGCQK  E+ D+ KLR  Y+KR+  EV  D LG+E+KGY+ +I GG DKQG
Sbjct: 1   MKLNVSFPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRIAGGNDKQG 60

Query: 281 FPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGE 460
           FPMKQGVLT+ RVRLL+ +G  C+                 CIV  +LSV+ LVIV+KGE
Sbjct: 61  FPMKQGVLTNSRVRLLMSKGHSCY--RPRRDGERKRKSVRGCIVDANLSVLALVIVRKGE 118

Query: 461 NDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRSYV 577
            ++PGLTD   PR  GPKRASKI+KLFNL K+DDVR YV
Sbjct: 119 QEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYV 157

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>RS6_CAEEL (Q9NEN6) 40S ribosomal protein S6|
          Length = 246

 Score =  174 bits (440), Expect = 2e-43
 Identities = 88/165 (53%), Positives = 116/165 (70%)
 Frame = +2

Query: 101 MKLSIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFKIMGGCDKQG 280
           M+L+ A P TG QK  E+D+++KLR  ++KR+SQEV  D LG+E+KGY+ +I GG DKQG
Sbjct: 1   MRLNFAYPATGLQKSFEVDEEKKLRLFFEKRMSQEVAIDALGDEWKGYVVRIGGGNDKQG 60

Query: 281 FPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGE 460
           FPMKQG+LT+GRVRLLL +G  C+                 CIV  ++S ++LVIVKKG+
Sbjct: 61  FPMKQGILTNGRVRLLLKKGQSCY--RERKNGERKRKSVRGCIVDANMSALSLVIVKKGD 118

Query: 461 NDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRSYVNTYRRT 595
            ++ GLTD+  PR  GPKRASKI+KLFNL K DDV  YV T+ +T
Sbjct: 119 GEIEGLTDSVLPRKLGPKRASKIRKLFNLTKHDDVTKYVITHDKT 163

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>RS6B_SCHPO (Q9C0Z7) 40S ribosomal protein S6-B|
          Length = 239

 Score =  173 bits (438), Expect = 4e-43
 Identities = 89/159 (55%), Positives = 108/159 (67%)
 Frame = +2

Query: 101 MKLSIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFKIMGGCDKQG 280
           MKL+I+ P  G QK +EIDDD++LR   +KR+ QEV GD +G EF GY+FKI GG DKQG
Sbjct: 1   MKLNISYPANGTQKLIEIDDDRRLRVFMEKRMGQEVPGDSVGPEFAGYVFKITGGNDKQG 60

Query: 281 FPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGE 460
           FPM QGVL   RVRLLL  G PC+                 CIV QDL+V+ L IVK+GE
Sbjct: 61  FPMFQGVLLPHRVRLLLRAGHPCY--RPRRDGERKRKSVRGCIVGQDLAVLALAIVKQGE 118

Query: 461 NDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRSYV 577
            D+PGLTD   P+  GPKRASKI++ FNL K+DDVR +V
Sbjct: 119 QDIPGLTDVTVPKRLGPKRASKIRRFFNLSKEDDVRQFV 157

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>RS6A_SCHPO (P05752) 40S ribosomal protein S6-A|
          Length = 239

 Score =  172 bits (437), Expect = 5e-43
 Identities = 88/159 (55%), Positives = 108/159 (67%)
 Frame = +2

Query: 101 MKLSIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFKIMGGCDKQG 280
           MKL+I+ P  G QK +EIDDD++LR   +KR+ QEV GD +G EF GY+FKI GG DKQG
Sbjct: 1   MKLNISYPANGTQKLIEIDDDRRLRVFMEKRMGQEVPGDSVGPEFAGYVFKITGGNDKQG 60

Query: 281 FPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGE 460
           FPM QGVL   RVRLLL  G PC+                 CIV QDL+V+ L I+K+GE
Sbjct: 61  FPMFQGVLLPHRVRLLLRAGHPCY--RPRRDGERKRKSVRGCIVGQDLAVLALAIIKQGE 118

Query: 461 NDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRSYV 577
            D+PGLTD   P+  GPKRASKI++ FNL K+DDVR +V
Sbjct: 119 QDIPGLTDVTVPKRLGPKRASKIRRFFNLSKEDDVRQFV 157

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>RS6_DEBHA (Q6BXH8) 40S ribosomal protein S6|
          Length = 236

 Score =  166 bits (421), Expect = 4e-41
 Identities = 83/159 (52%), Positives = 111/159 (69%)
 Frame = +2

Query: 101 MKLSIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFKIMGGCDKQG 280
           MKL+I+ P  G QK ++I+D+ KLR  Y+KR+ QEV GD +G+EFKGYIF+I GG DKQG
Sbjct: 1   MKLNISYPANGTQKCIDIEDEHKLRVFYEKRMGQEVEGDTVGDEFKGYIFRITGGNDKQG 60

Query: 281 FPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGE 460
           FPMKQGV+   RV+LLL +G  C+                 CIV+QDL+V+ L +VK+G+
Sbjct: 61  FPMKQGVMHPTRVKLLLAKGHSCY--RPRRTGERKRKSVRGCIVAQDLAVLALSVVKQGD 118

Query: 461 NDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRSYV 577
           +D+ GLTDT  P+  GPKRA+ I+K F L K+DDVR +V
Sbjct: 119 SDIEGLTDTTTPKRLGPKRANNIRKFFGLTKEDDVRQFV 157

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>RS6_YARLI (Q6C169) 40S ribosomal protein S6|
          Length = 242

 Score =  165 bits (418), Expect = 8e-41
 Identities = 84/159 (52%), Positives = 108/159 (67%)
 Frame = +2

Query: 101 MKLSIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFKIMGGCDKQG 280
           MKL+IA P  G QK ++I+D+ ++R  Y+KR+ QEV  D LG+EFKGY+ KI GG DKQG
Sbjct: 1   MKLNIAYPAQGTQKCIDIEDEHRVRGFYEKRMGQEVEADFLGDEFKGYVLKITGGNDKQG 60

Query: 281 FPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGE 460
           FPMKQGV+   RVRLLL + + C+                 CIVS DLSV+++VIVK+G+
Sbjct: 61  FPMKQGVMHPTRVRLLLSKDSSCY--RSRRAGERKRKSVRGCIVSSDLSVLSVVIVKQGD 118

Query: 461 NDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRSYV 577
            D+ GLT    PR  GPKRA+ I+KLF L K+DDVR YV
Sbjct: 119 ADIEGLTTETVPRRLGPKRANNIRKLFALSKEDDVRQYV 157

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>RS6_CANGA (Q6FJH3) 40S ribosomal protein S6|
          Length = 236

 Score =  165 bits (418), Expect = 8e-41
 Identities = 85/159 (53%), Positives = 107/159 (67%)
 Frame = +2

Query: 101 MKLSIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFKIMGGCDKQG 280
           MKL+IA P  G QK VE+DD+ ++R  YDKRI QE+ G+ +G+EFKGY FKI GG DKQG
Sbjct: 1   MKLNIAYPVNGTQKTVEVDDEHRVRVFYDKRIGQEIEGEAVGDEFKGYTFKITGGNDKQG 60

Query: 281 FPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGE 460
           FPMKQGVL   RV+LLL +G  C+                  IV  DL+V++LVIVKKGE
Sbjct: 61  FPMKQGVLLPTRVKLLLAKGHSCY--RPRRSGERKRKSVRGAIVGPDLAVLSLVIVKKGE 118

Query: 461 NDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRSYV 577
            +L G+TD   P+  GPKRA+ I+K F L K+DDVR +V
Sbjct: 119 QELEGVTDATVPKRLGPKRANHIRKFFGLTKEDDVRDFV 157

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>RS6_YEAST (P02365) 40S ribosomal protein S6 (S10) (YS4) (RP9)|
          Length = 236

 Score =  164 bits (414), Expect = 2e-40
 Identities = 84/159 (52%), Positives = 106/159 (66%)
 Frame = +2

Query: 101 MKLSIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFKIMGGCDKQG 280
           MKL+I+ P  G QK  EIDD+ ++R  +DKRI QEV G+ +G+EFKGY+FKI GG DKQG
Sbjct: 1   MKLNISYPVNGSQKTFEIDDEHRIRVFFDKRIGQEVDGEAVGDEFKGYVFKISGGNDKQG 60

Query: 281 FPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGE 460
           FPMKQGVL   R++LLL +   C+                  IV  DL+V+ LVIVKKGE
Sbjct: 61  FPMKQGVLLPTRIKLLLTKNVSCY--RPRRDGERKRKSVRGAIVGPDLAVLALVIVKKGE 118

Query: 461 NDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRSYV 577
            +L GLTDT  P+  GPKRA+ I+K F L K+DDVR +V
Sbjct: 119 QELEGLTDTTVPKRLGPKRANNIRKFFGLSKEDDVRDFV 157

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>RS6_KLUMA (P41798) 40S ribosomal protein S6 (Ribosomal protein S10)|
          Length = 235

 Score =  163 bits (412), Expect = 4e-40
 Identities = 84/159 (52%), Positives = 108/159 (67%)
 Frame = +2

Query: 101 MKLSIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFKIMGGCDKQG 280
           MKL+I+ P  G QK VEIDD+ ++R  YDKRI QEV G+ +G+EFKGY+FKI GG DKQG
Sbjct: 1   MKLNISYPINGTQKCVEIDDEHRVRVFYDKRIGQEVDGEAVGDEFKGYVFKIAGGNDKQG 60

Query: 281 FPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGE 460
           FPMKQGVL   RV+LL+ +GT C+                  IV  DL+V+ LVIVKKG+
Sbjct: 61  FPMKQGVLLPTRVKLLMAKGTSCY--RPRRNGERKRKSVRGAIVGPDLAVLALVIVKKGD 118

Query: 461 NDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRSYV 577
            ++ G+T+   P+  GPKRA+ I+K F L K+DDVR YV
Sbjct: 119 QEIEGVTNETVPKRLGPKRANNIRKFFGLTKEDDVRDYV 157

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>RS6_ASHGO (Q74ZK3) 40S ribosomal protein S6|
          Length = 236

 Score =  162 bits (410), Expect = 7e-40
 Identities = 80/159 (50%), Positives = 107/159 (67%)
 Frame = +2

Query: 101 MKLSIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFKIMGGCDKQG 280
           MKL+I+ P  G QK +E+DD+ ++R  YDKRI QEV G+ +G+EFKGY+FKI GG DKQG
Sbjct: 1   MKLNISYPVNGTQKTIEVDDEHRVRVFYDKRIGQEVNGEAVGDEFKGYVFKIAGGNDKQG 60

Query: 281 FPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGE 460
           FPMKQGVL   RV+LL+ +GT C+                  IV  DL+V+ L+I KKG+
Sbjct: 61  FPMKQGVLLPTRVKLLMAKGTSCY--RPRRNGERKRKSVRGAIVGPDLAVLALIITKKGD 118

Query: 461 NDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRSYV 577
            ++ G+T+   P+  GPKRA+ I+K F L KDDDVR +V
Sbjct: 119 QEIEGITNESVPKRLGPKRANNIRKFFGLTKDDDVRDFV 157

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>RS6_TOBAC (P29345) 40S ribosomal protein S6 (Fragment)|
          Length = 199

 Score =  160 bits (405), Expect = 3e-39
 Identities = 80/116 (68%), Positives = 88/116 (75%)
 Frame = +2

Query: 236 KGYIFKIMGGCDKQGFPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVS 415
           KGY+FKIMGGCDKQGFPMKQGVLT GRVRLLL+RGTPCF                 CIVS
Sbjct: 1   KGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLYRGTPCFRGYGRRNGERRRKSVRGCIVS 60

Query: 416 QDLSVINLVIVKKGENDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRSYVNT 583
            DLSV+NLVIVKKGENDLPGLTDTEKPRMRGP+   + + L+   K+DDVR YVNT
Sbjct: 61  PDLSVLNLVIVKKGENDLPGLTDTEKPRMRGPREPQRSEALY--FKEDDVRKYVNT 114

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>RS6_KLULA (Q6CM04) 40S ribosomal protein S6|
          Length = 236

 Score =  160 bits (404), Expect = 3e-39
 Identities = 82/159 (51%), Positives = 106/159 (66%)
 Frame = +2

Query: 101 MKLSIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFKIMGGCDKQG 280
           MKL+I+ P  G QK +EIDD+ ++R  YDKRI QEV G+ +G+EFKGY+FKI GG DKQG
Sbjct: 1   MKLNISYPINGTQKCIEIDDEHRVRVFYDKRIGQEVDGESVGDEFKGYVFKIAGGNDKQG 60

Query: 281 FPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGE 460
           FPMKQGVL   RV+LLL +G  C+                  IV  DL+V+ L+I KKGE
Sbjct: 61  FPMKQGVLLPTRVKLLLAKGHSCY--RPRRNGERKRKSVRGAIVGPDLAVLALIITKKGE 118

Query: 461 NDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRSYV 577
            ++ G+T+   P+  GPKRA+ I+K F L K+DDVR YV
Sbjct: 119 QEIEGITNDTVPKRLGPKRANNIRKFFGLTKEDDVRDYV 157

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>RS6_LEIMA (Q9NE83) 40S ribosomal protein S6|
          Length = 249

 Score =  142 bits (358), Expect = 7e-34
 Identities = 75/160 (46%), Positives = 97/160 (60%), Gaps = 1/160 (0%)
 Frame = +2

Query: 101 MKLSIANPTTGCQKKVEIDDDQKLR-NLYDKRISQEVVGDLLGEEFKGYIFKIMGGCDKQ 277
           MKL+IA P  G  K+ EI D+   R  L D R+  EV G + G EFKGYIF++ GG DK 
Sbjct: 1   MKLNIAYPRNGTVKQFEISDEVLRRVQLQDYRLGNEVDGAIFGSEFKGYIFRLRGGSDKD 60

Query: 278 GFPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKG 457
           GFPM  GVL S RV LL+ RG   F                 C+++ D++++N+ I K G
Sbjct: 61  GFPMVPGVLASSRVSLLVKRGAIGFNTFRGYQGERRRKNVRGCVLASDIALVNVTISKVG 120

Query: 458 ENDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRSYV 577
           +  + G+TDT  PR  GPKRASKI+KLFNL + +DVR YV
Sbjct: 121 DQPIEGVTDTTAPRRLGPKRASKIRKLFNLSRTEDVRKYV 160

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>RS6_LEIIN (O44012) 40S ribosomal protein S6|
          Length = 249

 Score =  139 bits (351), Expect = 5e-33
 Identities = 74/160 (46%), Positives = 96/160 (60%), Gaps = 1/160 (0%)
 Frame = +2

Query: 101 MKLSIANPTTGCQKKVEIDDDQKLR-NLYDKRISQEVVGDLLGEEFKGYIFKIMGGCDKQ 277
           M L+IA P  G  K+ EI D+   R  L D R+  EV G + G EFKGYIF++ GG DK 
Sbjct: 1   MYLNIAYPRNGTVKQFEISDEVLRRVQLQDYRLGNEVDGAIFGSEFKGYIFRLRGGSDKD 60

Query: 278 GFPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKG 457
           GFPM  GVL S RV LL+ RG   F                 C+++ D++++N+ I K G
Sbjct: 61  GFPMVPGVLASSRVSLLVKRGAIGFNTFRGYQGERRRKNVRGCVLASDIALVNVTISKVG 120

Query: 458 ENDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRSYV 577
           +  + G+TDT  PR  GPKRASKI+KLFNL + +DVR YV
Sbjct: 121 DQPIEGVTDTTAPRRLGPKRASKIRKLFNLSRTEDVRKYV 160

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>RS6_ENCCU (Q8SRY0) 40S ribosomal protein S6|
          Length = 203

 Score = 88.2 bits (217), Expect = 2e-17
 Identities = 54/147 (36%), Positives = 82/147 (55%)
 Frame = +2

Query: 149 EIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFKIMGGCDKQGFPMKQGVLTSGRVRLL 328
           EI+   ++R LYDK+I  +  G +LGEEF+G I +I GG D QGFPM  G LT  RVR L
Sbjct: 3   EIERRNEVR-LYDKKIGDQFDGGILGEEFEGTIMEITGGDDYQGFPMVSGHLTKKRVRPL 61

Query: 329 LHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGENDLPGLTDTEKPRMRG 508
           L +G   +                  IVS+++ V+NL+I++ GE ++ GLT+        
Sbjct: 62  LSKGDAGYRCRRKGVRRRKSVRGS--IVSEEICVLNLIILRPGEKEIDGLTNAVNDVSHL 119

Query: 509 PKRASKIKKLFNLGKDDDVRSYVNTYR 589
           P++  K++K+F  G  D+ ++ V   R
Sbjct: 120 PRKEKKLRKMF--GVPDEEKNVVGYIR 144

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>RS6E_PYRKO (Q5JDK8) 30S ribosomal protein S6e|
          Length = 125

 Score = 53.5 bits (127), Expect = 4e-07
 Identities = 35/91 (38%), Positives = 49/91 (53%), Gaps = 9/91 (9%)
 Frame = +2

Query: 95  STMKLSIANPTTGCQKKVEIDDDQKLRNLYDKRISQEV--------VGDLLGEEFKGYI- 247
           +T KL I+NP  G  K+VEI   +  + L  +RI +E+        + ++ GEE      
Sbjct: 2   ATFKLVISNPKNGVAKQVEISGPEADK-LIGRRIGEEIPASELGLNLSEIFGEEIPADAK 60

Query: 248 FKIMGGCDKQGFPMKQGVLTSGRVRLLLHRG 340
            KI GG DK GFPM+  V    RV++LL RG
Sbjct: 61  LKITGGTDKDGFPMRPDVHGPRRVKILLSRG 91

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>RS6E_METKA (Q8TVE6) 30S ribosomal protein S6e|
          Length = 130

 Score = 53.5 bits (127), Expect = 4e-07
 Identities = 40/125 (32%), Positives = 59/125 (47%)
 Frame = +2

Query: 104 KLSIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFKIMGGCDKQGF 283
           K+ +A+P      +VE+  +     L  KRI   + G+++G    GY  KI GG DK GF
Sbjct: 5   KVVVADPEKARSYQVEVKGEDA-EKLIGKRIGDVIDGEIVG--LPGYKLKITGGTDKDGF 61

Query: 284 PMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGEN 463
           PM+  +    RVRLLL  G P F                   +S+D+  +N VIV+ G+ 
Sbjct: 62  PMRPDIHGPVRVRLLL-SGPPGFRPERKGERRRKTVRGNT--ISEDIVQVNTVIVEYGDK 118

Query: 464 DLPGL 478
            +  L
Sbjct: 119 PVEEL 123

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>RS6E_PYRAB (Q9UYS3) 30S ribosomal protein S6e|
          Length = 125

 Score = 53.1 bits (126), Expect = 6e-07
 Identities = 33/91 (36%), Positives = 50/91 (54%), Gaps = 9/91 (9%)
 Frame = +2

Query: 95  STMKLSIANPTTGCQKKVEIDDDQKLRNLYDKRISQEV--------VGDLLGEEFKGYI- 247
           +T KL I++P TG  K++EI   +    L  KRI  ++        + +L G+EF   + 
Sbjct: 2   ATFKLVISDPKTGIAKQIEITGPEA-EKLIGKRIGDQIPVKELGINLNELFGKEFPEDVK 60

Query: 248 FKIMGGCDKQGFPMKQGVLTSGRVRLLLHRG 340
            +I GG DK GFPM+  +    RVR+LL +G
Sbjct: 61  MEIRGGTDKDGFPMRPDIHGPRRVRILLSKG 91

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>RS6E_METJA (P54067) 30S ribosomal protein S6e|
          Length = 131

 Score = 52.0 bits (123), Expect = 1e-06
 Identities = 40/131 (30%), Positives = 61/131 (46%)
 Frame = +2

Query: 98  TMKLSIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFKIMGGCDKQ 277
           T K  +A+P TG   ++E D+      L  K+I +   G ++G E  GY  +I GG D  
Sbjct: 3   TAKFVVADPKTGRCYQIEADNTP----LVGKKIGEVFDGKIIGLE--GYKLQIRGGTDSS 56

Query: 278 GFPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKG 457
           GFPM+  +  S +VR+LL    P F                   ++ D+  IN+ +V+ G
Sbjct: 57  GFPMRPDIHGSRKVRVLL-SAPPGFKPKRKGERRRKTVRGNT--IAPDIVQINVKVVEYG 113

Query: 458 ENDLPGLTDTE 490
           E  +P L   E
Sbjct: 114 EKSIPELLGLE 124

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>RS6E_METTH (O26360) 30S ribosomal protein S6e|
          Length = 126

 Score = 51.6 bits (122), Expect = 2e-06
 Identities = 37/120 (30%), Positives = 55/120 (45%), Gaps = 1/120 (0%)
 Frame = +2

Query: 137 QKKVEID-DDQKLRNLYDKRISQEVVGDLLGEEFKGYIFKIMGGCDKQGFPMKQGVLTSG 313
           +K V+++ D  + R L    I  E  G ++G    GY  KI GG DK GFPMK+ V  + 
Sbjct: 11  EKSVQMEVDPSESRGLIGLTIGDEFDGSIIG--LSGYKLKITGGSDKNGFPMKKTVPGAR 68

Query: 314 RVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGENDLPGLTDTEK 493
           R+R L+  G                       +S D+  IN V+++KGE  L  L   ++
Sbjct: 69  RIRSLVSGGV---GYKPRRDGERRRKTFRGNTISDDIVQINTVVIEKGEKPLEELLGADE 125

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>RS6E_PYRFU (Q8U3H8) 30S ribosomal protein S6e|
          Length = 125

 Score = 51.2 bits (121), Expect = 2e-06
 Identities = 33/91 (36%), Positives = 50/91 (54%), Gaps = 9/91 (9%)
 Frame = +2

Query: 95  STMKLSIANPTTGCQKKVEIDDDQKLRNLYDKRISQEV--------VGDLLGEEFKGYI- 247
           +T KL I++P +G  K+VEI   +    L  KRI  ++        + +L G+EF   + 
Sbjct: 2   ATFKLVISDPKSGIAKQVEITGAET-EKLIGKRIGDQIPAKELNINLNELFGKEFPEDVK 60

Query: 248 FKIMGGCDKQGFPMKQGVLTSGRVRLLLHRG 340
            +I GG DK GFPM+  +    RVR+LL +G
Sbjct: 61  LEIRGGTDKDGFPMRPDIHGPRRVRVLLSKG 91

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>RS6E_PYRHO (O58349) 30S ribosomal protein S6e|
          Length = 125

 Score = 47.8 bits (112), Expect = 2e-05
 Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 9/91 (9%)
 Frame = +2

Query: 95  STMKLSIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFK------- 253
           +T KL I++P +G  K++EI        L  K+I  ++    LG + K    K       
Sbjct: 2   TTFKLVISDPKSGIAKQIEISG-ANAEKLIGKKIGDQIPVKELGLDLKALFGKDFPEDVK 60

Query: 254 --IMGGCDKQGFPMKQGVLTSGRVRLLLHRG 340
             I GG DK GFPM+  +    RVR+LL +G
Sbjct: 61  MEIRGGTDKDGFPMRPDIHGPRRVRILLSKG 91

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>RS6E_PICTO (Q6L1H6) 30S ribosomal protein S6e|
          Length = 127

 Score = 45.1 bits (105), Expect = 2e-04
 Identities = 36/119 (30%), Positives = 52/119 (43%)
 Frame = +2

Query: 113 IANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFKIMGGCDKQGFPMK 292
           IA+  TG   K EID +  +  L  +RI  E+ G     E  GY  KI GG    GFPMK
Sbjct: 6   IADKNTGKTYKKEIDQNV-IGLLTGRRIGDEIDGSFF--EMPGYKLKITGGSANNGFPMK 62

Query: 293 QGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGENDL 469
           + +  +G+ R+L+                         IV  D+S +N++I + G   L
Sbjct: 63  KDLPIAGKKRILI----TYTHGRKGKNGIRKRVTLRGNIVGSDISQLNMIITQYGPQPL 117

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>RS6E_THEAC (Q9HLA6) 30S ribosomal protein S6e|
          Length = 124

 Score = 42.7 bits (99), Expect = 8e-04
 Identities = 36/132 (27%), Positives = 58/132 (43%), Gaps = 5/132 (3%)
 Frame = +2

Query: 113 IANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFKIMGGCDKQGFPMK 292
           IA+P TG   K EI  + ++ +L  ++I  E+ G     +  GY   + GG    GFPM+
Sbjct: 4   IADPKTGKTYKKEIPAE-RMGSLVGRKIGDEIDGVFF--DLVGYKLVVTGGSSIDGFPMR 60

Query: 293 QGVLTSGRVRLLL-----HRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKG 457
             + T G+ ++L+     +RG                      I+  D+S INL IV+ G
Sbjct: 61  SDLQTQGKKQILVSYKKGYRG---------KNGIRKRITVRGSIIGSDISQINLKIVQYG 111

Query: 458 ENDLPGLTDTEK 493
              L    D ++
Sbjct: 112 PTPLEEKKDDQQ 123

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>RS6E_NANEQ (Q74MJ5) 30S ribosomal protein S6e|
          Length = 126

 Score = 41.6 bits (96), Expect = 0.002
 Identities = 27/76 (35%), Positives = 42/76 (55%)
 Frame = +2

Query: 95  STMKLSIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFKIMGGCDK 274
           S +K+ +++P +G   ++E  + Q L   Y K+I   + G  +G +  GY  KI GG D 
Sbjct: 5   SVVKIVVSDPKSGKAIQIETKEPQWL---YGKKIGDTIDGSKIGLD--GYELKITGGSDI 59

Query: 275 QGFPMKQGVLTSGRVR 322
            GFPM++ V   G VR
Sbjct: 60  AGFPMRKEV--EGAVR 73

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>RS6E_ARCFU (O29739) 30S ribosomal protein S6e|
          Length = 129

 Score = 40.8 bits (94), Expect = 0.003
 Identities = 36/121 (29%), Positives = 54/121 (44%), Gaps = 2/121 (1%)
 Frame = +2

Query: 104 KLSIANPTTG--CQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFKIMGGCDKQ 277
           ++ I++P TG   QK VE         L  K+I   + G ++      Y  KI GG D+ 
Sbjct: 4   RVVISDPKTGRAYQKVVE---GANANRLIGKQIGDVISGTIVDLP-PDYELKITGGTDRD 59

Query: 278 GFPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKG 457
           GFPM+  +  + R RLLL  G                      ++S+D+  IN V+VK G
Sbjct: 60  GFPMRPDLPGTARRRLLLSGGV---GFRPKEKGLRKRKGVRGRVISKDILQINTVVVKHG 116

Query: 458 E 460
           +
Sbjct: 117 K 117

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>RS6E_HALSA (Q9HMJ5) 30S ribosomal protein S6e|
          Length = 131

 Score = 38.9 bits (89), Expect = 0.011
 Identities = 25/82 (30%), Positives = 42/82 (51%)
 Frame = +2

Query: 95  STMKLSIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFKIMGGCDK 274
           +T ++++A+P +G   + E+D  Q       + I   V G  +G +  GY  +I GG D 
Sbjct: 2   ATFQVAVADPESGRTYQFEVDG-QDANRFIGREIGAAVDGGAVGLD--GYTVEITGGSDD 58

Query: 275 QGFPMKQGVLTSGRVRLLLHRG 340
            G PM++ V  S  + +LL  G
Sbjct: 59  AGRPMREDVDGSDLMEVLLEGG 80

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>RS6E_METAC (Q8TQL4) 30S ribosomal protein S6e|
          Length = 136

 Score = 38.1 bits (87), Expect = 0.019
 Identities = 26/82 (31%), Positives = 39/82 (47%)
 Frame = +2

Query: 95  STMKLSIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFKIMGGCDK 274
           +  K+ +++P  G   +++I D +    L  K I   V G + G    GY  +I GGCD 
Sbjct: 2   ANFKVVVSDPKEGRAYQIDIKDAEA-NALIGKAIGDVVDGAIFG--LAGYKVQITGGCDG 58

Query: 275 QGFPMKQGVLTSGRVRLLLHRG 340
            GF MK  +    R R+L   G
Sbjct: 59  SGFVMKPDLPGPRRQRILTATG 80

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>RS6E_AERPE (Q9Y9B6) 30S ribosomal protein S6e|
          Length = 245

 Score = 37.0 bits (84), Expect = 0.043
 Identities = 27/70 (38%), Positives = 35/70 (50%)
 Frame = +2

Query: 143 KVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFKIMGGCDKQGFPMKQGVLTSGRVR 322
           ++ + DD  ++ L    I     G L+G    G  FKI GG D  G PM  GV  SGR +
Sbjct: 136 QIAVPDDVHVK-LAGLEIGDVFDGGLIG--MPGLKFKIRGGTDATGIPMHPGVPGSGRYK 192

Query: 323 LLLHRGTPCF 352
           +LL  G P F
Sbjct: 193 VLL-AGPPGF 201

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>RS6E_METMA (Q8PU79) 30S ribosomal protein S6e|
          Length = 136

 Score = 36.6 bits (83), Expect = 0.056
 Identities = 25/82 (30%), Positives = 38/82 (46%)
 Frame = +2

Query: 95  STMKLSIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFKIMGGCDK 274
           +  K+ +++P      +++I D +    L  K I   V G + G    GY  +I GGCD 
Sbjct: 2   ANFKVVVSDPKEARAYQIDIKDAEA-NALIGKSIGDVVDGSIFG--LAGYKVQITGGCDG 58

Query: 275 QGFPMKQGVLTSGRVRLLLHRG 340
            GF MK  +    R R+L   G
Sbjct: 59  SGFVMKPDLPGPRRQRILTATG 80

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>RS6E_SULTO (Q975N7) 30S ribosomal protein S6e|
          Length = 213

 Score = 36.6 bits (83), Expect = 0.056
 Identities = 29/98 (29%), Positives = 42/98 (42%)
 Frame = +2

Query: 158 DDQKLRNLYDKRISQEVVGDLLGEEFKGYIFKIMGGCDKQGFPMKQGVLTSGRVRLLLHR 337
           D  KL N+   +I   +  ++ G   K    KI GG D  GFPM+  V   G  R LL  
Sbjct: 122 DQSKLSNIIGAKIGDVIELNVSGIPLK---VKITGGSDNSGFPMRYDV-PGGAKRKLLLS 177

Query: 338 GTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVK 451
           G P F                  +++QD+  IN +I++
Sbjct: 178 GPPGFYPEEDGMRRKKTVRGN--MITQDIVQINTIIIR 213

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>BAG3_HUMAN (O95817) BAG family molecular chaperone regulator 3 (BCL-2-binding|
           athanogene-3) (BAG-3) (Bcl-2-binding protein Bis)
           (Docking protein CAIR-1)
          Length = 575

 Score = 35.0 bits (79), Expect = 0.16
 Identities = 22/59 (37%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
 Frame = +1

Query: 7   PYPSSNRAAPPPPLHPAFGLLAAGEL-VPQLHHEAEHREPH--HGVPEEGRDR*RPEAA 174
           P    +R  P    HP +  L  G + +P LH  AE+R+ H  H  P+ G  R R EAA
Sbjct: 69  PSREGSRLPPAREGHPVYPQLRPGYIPIPVLHEGAENRQVHPFHVYPQPGMQRFRTEAA 127

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>BAG3_MOUSE (Q9JLV1) BAG family molecular chaperone regulator 3 (BCL-2-binding|
           athanogene-3) (BAG-3) (Bcl-2-binding protein Bis)
          Length = 577

 Score = 33.9 bits (76), Expect = 0.37
 Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
 Frame = +1

Query: 7   PYPSSNRAAPPPPLHPAFGLLAAGEL-VPQLHHEAEHREPH--HGVPEEGRDR*RPEAA 174
           P  + +R  P    HP +  L  G + +P LH  +E+R+PH  H   + G  R R EAA
Sbjct: 71  PSRNGSRLLPIREGHPIYPQLRPGYIPIPVLHEGSENRQPHLFHAYSQPGVQRFRTEAA 129

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>RS6E_SULSO (Q980A6) 30S ribosomal protein S6e|
          Length = 214

 Score = 33.5 bits (75), Expect = 0.48
 Identities = 32/106 (30%), Positives = 47/106 (44%), Gaps = 2/106 (1%)
 Frame = +2

Query: 140 KKVEIDDDQ-KLRNLYDKRISQEV-VGDLLGEEFKGYIFKIMGGCDKQGFPMKQGVLTSG 313
           K ++I  DQ K  NL   +I        L+G   K    KI GG D  GFPM+  V+ + 
Sbjct: 115 KTLQISVDQNKATNLVGLKIGDVFEANQLIGLPVK---LKITGGSDNSGFPMRFDVIGAA 171

Query: 314 RVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVK 451
           + ++LL  G P F                   +SQ++  IN +IV+
Sbjct: 172 KRKILL-SGPPGFYPNENGERRRKTIRGNT--ISQEIVQINTIIVR 214

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>CX017_MOUSE (Q8C3F2) Protein CXorf17 homolog|
          Length = 1091

 Score = 33.5 bits (75), Expect = 0.48
 Identities = 16/38 (42%), Positives = 17/38 (44%)
 Frame = +1

Query: 34  PPPPLHPAFGLLAAGELVPQLHHEAEHREPHHGVPEEG 147
           PPPPL PA     +G   P  HH   H   HHG    G
Sbjct: 63  PPPPLPPAAFGAYSGGAGPSRHHHPAHHFHHHGQAPPG 100

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>ETS6_DROME (P29776) DNA-binding protein D-ETS-6|
          Length = 475

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 12/27 (44%), Positives = 14/27 (51%)
 Frame = +1

Query: 49  HPAFGLLAAGELVPQLHHEAEHREPHH 129
           H A G +  G   P LHH  +H  PHH
Sbjct: 362 HHAGGAMQLGRHPPPLHHHPQHSHPHH 388

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>RS6E_HALMA (P21509) 30S ribosomal protein S6e (HS13)|
          Length = 128

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 17/65 (26%), Positives = 33/65 (50%)
 Frame = +2

Query: 107 LSIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFKIMGGCDKQGFP 286
           +++++P  G   ++++D  Q       + +  EV G  +G +  GY  ++ GG D  G P
Sbjct: 5   VAVSDPEDGHTYQIDVDG-QDANRFIGRELGDEVDGGAVGLD--GYSLELTGGSDTSGRP 61

Query: 287 MKQGV 301
           M+  V
Sbjct: 62  MRPDV 66

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>RPGF6_HUMAN (Q8TEU7) Rap guanine nucleotide exchange factor 6 (PDZ|
            domain-containing guanine nucleotide exchange factor 2)
            (PDZ-GEF2) (RA-GEF-2)
          Length = 1601

 Score = 30.8 bits (68), Expect = 3.1
 Identities = 15/48 (31%), Positives = 24/48 (50%)
 Frame = -1

Query: 520  SPLGSPHPGLLSVSKAWQIILTLLDNHQVDNRQVLADNATTDGLSPAL 377
            SP GSPH G   +  A    L+   + ++ +R  +  N + D +S AL
Sbjct: 1241 SPQGSPHKGYTLIPSAKSDNLSDSSHSEISSRSSIVSNCSVDSMSAAL 1288

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>SL9A5_RAT (Q9Z0X2) Sodium/hydrogen exchanger 5 (Na(+)/H(+) exchanger 5) (NHE-5)|
            (Solute carrier family 9 member 5)
          Length = 898

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 24/81 (29%), Positives = 35/81 (43%), Gaps = 7/81 (8%)
 Frame = -3

Query: 350  SKVCPCEAEGGHAQKLALLASLGSPAYHSHP*S*RYNP*IPHPEDHQL-------PPGRF 192
            +K+ P + + G  Q ++ L SL SP     P   R  P    PE+ Q+       P   F
Sbjct: 782  TKIVPVDMQTGWNQSISSLESLASPPCTQPPTLTRLPPHPLVPEEPQVPLDLSSDPRSSF 841

Query: 191  SCHKGSAASGRHRSRPSSGTP 129
            +     A +GR RS  S+  P
Sbjct: 842  AFPPSLAKAGRSRSESSADIP 862

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>DNPEP_CAEEL (Q19087) Putative aspartyl aminopeptidase (EC 3.4.11.21)|
          Length = 470

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
 Frame = +2

Query: 416 QDLSVINLVIVKKGENDLPGLTDTEKPRMRGPKRASKI---KKLFNLGKDDDVRSYVNTY 586
           +DLSV  LVIVK GE     L D +KP +  P  A  +   +  F    + ++R  + T+
Sbjct: 130 RDLSVAGLVIVKNGEKLQHKLIDVKKPVLFIPNLAIHLETDRTTFKPNTETELRPILETF 189

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>SMI1_CANGA (Q6FL35) KNR4/SMI1 homolog|
          Length = 584

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 17/58 (29%), Positives = 28/58 (48%)
 Frame = -1

Query: 553 LAKVEELLDLGSPLGSPHPGLLSVSKAWQIILTLLDNHQVDNRQVLADNATTDGLSPA 380
           +  +E+ +DL S  G+P  G+  V  AW+ I T    +  D    L+D  T + +  A
Sbjct: 55  ILSMEDDIDLDSMDGTPSEGVSEVLLAWRHIDTWTSEYNPDLNATLSDPCTANDIKHA 112

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>HRPX_PLALO (P04929) Histidine-rich glycoprotein precursor|
          Length = 351

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = +1

Query: 88  PQLHHEAEHREPHHGVPEE 144
           P+ HHE  H E HH  PEE
Sbjct: 66  PEEHHEPHHEEHHHHHPEE 84

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>CX017_HUMAN (Q9NX05) Protein CXorf17 (Tumor antigen BJ-HCC-21)|
          Length = 1096

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 17/47 (36%), Positives = 21/47 (44%), Gaps = 2/47 (4%)
 Frame = +1

Query: 13  PSSNRAAPP--PPLHPAFGLLAAGELVPQLHHEAEHREPHHGVPEEG 147
           P + R + P  PPL PA     +G   P  HH   H   HHG  + G
Sbjct: 54  PRAARGSVPLQPPLPPAALGAYSGGAGPTRHHHPAHHFHHHGQAQPG 100

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>Y1923_STRMU (Q8DS88) UPF0168 protein SMU.1923c|
          Length = 163

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 13/31 (41%), Positives = 22/31 (70%)
 Frame = +2

Query: 140 KKVEIDDDQKLRNLYDKRISQEVVGDLLGEE 232
           +KV  D +QK+R+ YD  +S  V+G+L+ +E
Sbjct: 85  EKVVNDIEQKIRSDYDSEVSSVVIGNLVMDE 115

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>STB3_YEAST (Q12427) Protein STB3 (SIN3-binding protein 3)|
          Length = 513

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 14/46 (30%), Positives = 22/46 (47%)
 Frame = +1

Query: 16  SSNRAAPPPPLHPAFGLLAAGELVPQLHHEAEHREPHHGVPEEGRD 153
           S+N    P P +P+F     G++ P L H+   ++ H   P  G D
Sbjct: 459 STNGVVSPKPTNPSFTNSQNGDIEPPLQHD---QQKHEQQPRNGED 501

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>SMC4_YEAST (Q12267) Structural maintenance of chromosome 4|
          Length = 1418

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 22/87 (25%), Positives = 37/87 (42%)
 Frame = +2

Query: 68  SPPASSCRNSTMKLSIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYI 247
           SPP S  R+ T +L +   +     +VE+           K+ S+  + +L+ E FK Y 
Sbjct: 109 SPPRSPGRSPTRRLELLQLSPVKNSRVELQKIYDRHQSSSKQQSRLFINELVLENFKSYA 168

Query: 248 FKIMGGCDKQGFPMKQGVLTSGRVRLL 328
            K + G     F    G   SG+  ++
Sbjct: 169 GKQVVGPFHTSFSAVVGPNGSGKSNVI 195

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>MARH4_MOUSE (Q80TE3) Membrane-associated RING finger protein 4|
           (Membrane-associated RING-CH protein IV) (MARCH-IV)
          Length = 408

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = -3

Query: 146 PSSGTPWWGSRCSASWWSCGTSSPA 72
           P  G  WW   C   W+SCG  +PA
Sbjct: 4   PLGGLLWWWC-CCCGWYSCGLCTPA 27


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 76,698,416
Number of Sequences: 219361
Number of extensions: 1658220
Number of successful extensions: 6319
Number of sequences better than 10.0: 63
Number of HSP's better than 10.0 without gapping: 5804
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6271
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 5216272880
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result