Clone Name | bart46a01 |
---|---|
Clone Library Name | barley_pub |
>KPK19_ARATH (Q39030) Serine/threonine-protein kinase AtPK19 (EC 2.7.11.1)| (Ribosomal-protein S6 kinase homolog) Length = 471 Score = 36.2 bits (82), Expect = 0.081 Identities = 26/83 (31%), Positives = 33/83 (39%) Frame = +1 Query: 373 MVSSQTSSLAVKLAQGPKLLTTKIIFPMDPLGVVSSENAEYDFSDVFGSSPVETATELCV 552 MVSSQ S Q K + + P V +N E FSDVFG P + E C Sbjct: 1 MVSSQCS--VANKNQTGKPFQKHLSLSISPPKSVLGDNLELQFSDVFGPMPEANSEEACD 58 Query: 553 VDPDSPAAPVESTEEVYNDPAVI 621 V D PA + + V+ Sbjct: 59 VAYDEPAVVYSRSHSLVGPSLVV 81
>DPOL_HHV7J (P52342) DNA polymerase (EC 2.7.7.7)| Length = 1012 Score = 32.3 bits (72), Expect = 1.2 Identities = 18/73 (24%), Positives = 39/73 (53%), Gaps = 1/73 (1%) Frame = +3 Query: 84 ARFLLHESRKNIGIKQVIFSRK*QYRFDLPFRRILGQFLAETSTCSRPLFT-VAYHFTSL 260 A+ L++ ++N+ K++ ++ R ++G++ + S LFT + YH+ Sbjct: 442 AKLCLNQEKENLSYKEI----PKKFIDGSKGRAVVGRYCIQDSLLVVQLFTKINYHYEMA 497 Query: 261 EVVKLAYLRMQCS 299 EV LAY+ ++C+ Sbjct: 498 EVASLAYITIRCA 510
>SAPS1_MOUSE (Q7TSI3) SAPS domain family member 1| Length = 856 Score = 31.2 bits (69), Expect = 2.6 Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 1/60 (1%) Frame = +1 Query: 418 GPKLLTTKIIFPMD-PLGVVSSENAEYDFSDVFGSSPVETATELCVVDPDSPAAPVESTE 594 GP T PMD P G S+ A+ + S P + +L DP P+AP E T+ Sbjct: 705 GPSWTATFDTVPMDAPTGPPVSKEADMSSIQIPSSPPAHGSPQLRSQDPTHPSAPQEVTD 764
>TRA1_CAEEL (P34708) Sex-determining transformer protein 1 (Hermaphrodization| of XO animals protein 2) Length = 1110 Score = 30.4 bits (67), Expect = 4.4 Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 5/37 (13%) Frame = -2 Query: 550 HKALLPSR--LDWNQKHQRNHIQH---FQRRQHPGDP 455 HKA+ +R LDWN+ HQ +++ H F R +H P Sbjct: 734 HKAIPITRRPLDWNETHQLHNLYHDPRFNRAEHQDSP 770
>CR034_HUMAN (Q5BJE1) Protein C18orf34| Length = 867 Score = 30.0 bits (66), Expect = 5.8 Identities = 12/42 (28%), Positives = 25/42 (59%), Gaps = 2/42 (4%) Frame = -2 Query: 589 WTQRELQGCLDQQHKALLPS--RLDWNQKHQRNHIQHFQRRQ 470 W +EL + ++H+A L L W+ + + N +QHF++++ Sbjct: 208 WKLQELPLAVQKEHEAYLSDVIELQWHLEDKANQLQHFEKQK 249
>EXOC6_CAEEL (Q18286) Probable exocyst complex component 6 (Exocyst complex| component Sec15) Length = 817 Score = 30.0 bits (66), Expect = 5.8 Identities = 19/60 (31%), Positives = 29/60 (48%) Frame = -1 Query: 584 STGAAGLSGSTTQSSVAVSTGLEPKTSEKSYSAFSEETTPRGSMGKIIFVVRSFGPCASF 405 ST +GS T S+ V+ ++E+ Y + ETT GSMG ++ + G SF Sbjct: 6 STSQPATTGSETASTSYVN--YVEMSAEQEYFLYELETTDSGSMGLVLRAIYDTGDVQSF 63
>TAT_SIVVG (P27982) TAT protein (Transactivating regulatory protein)| Length = 119 Score = 29.6 bits (65), Expect = 7.6 Identities = 13/27 (48%), Positives = 19/27 (70%) Frame = -2 Query: 238 TVNKGREQVEVSARNCPSILRKGRSKR 158 T KG+E+VE SAR PS+ RK +++ Sbjct: 84 TTQKGQEKVETSARTAPSLGRKNLAQQ 110
>PURA_HELPY (P56137) Adenylosuccinate synthetase (EC 6.3.4.4) (IMP--aspartate| ligase) (AdSS) (AMPSase) Length = 411 Score = 29.6 bits (65), Expect = 7.6 Identities = 20/48 (41%), Positives = 24/48 (50%), Gaps = 13/48 (27%) Frame = -1 Query: 563 SGSTTQSSVAVSTGLEPKTSE------KSYSAF-------SEETTPRG 459 S +TT +S VSTGL PK K+YS SE+TTP G Sbjct: 231 SSNTTSASACVSTGLNPKAINEVIGITKAYSTRVGNGPFPSEDTTPMG 278
>PURA_HELPJ (Q9ZMI1) Adenylosuccinate synthetase (EC 6.3.4.4) (IMP--aspartate| ligase) (AdSS) (AMPSase) Length = 411 Score = 29.6 bits (65), Expect = 7.6 Identities = 20/48 (41%), Positives = 24/48 (50%), Gaps = 13/48 (27%) Frame = -1 Query: 563 SGSTTQSSVAVSTGLEPKTSE------KSYSAF-------SEETTPRG 459 S +TT +S VSTGL PK K+YS SE+TTP G Sbjct: 231 SSNTTSASACVSTGLNPKAINEVIGITKAYSTRVGNGPFPSEDTTPMG 278
>LIPL_CAVPO (P11153) Lipoprotein lipase precursor (EC 3.1.1.34) (LPL)| Length = 465 Score = 29.3 bits (64), Expect = 9.9 Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 13/65 (20%) Frame = -1 Query: 575 AAGLSGSTTQSSVAVSTGLEPKTSEKSYSAFSEETTP-------------RGSMGKIIFV 435 AAG++GS T + V+ TGL+P Y+ + +P RGS G+ I + Sbjct: 154 AAGVAGSRTNTKVSRITGLDPAGPNFEYAEATSRLSPDDAQFVDVLHTFTRGSPGRSIGI 213 Query: 434 VRSFG 420 + G Sbjct: 214 QKPVG 218 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 85,406,036 Number of Sequences: 219361 Number of extensions: 1728106 Number of successful extensions: 5294 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 5066 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5288 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5710231900 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)