ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart45h10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_185693.1| Oryza sativa (japonica cultivar-group), Ozsa804... 64 4e-07
2ref|XM_476310.1| Oryza sativa (japonica cultivar-group), predic... 64 4e-07
3dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 64 4e-07
4dbj|AP003019.1| Oryza sativa (japonica cultivar-group) genomic D... 64 4e-07
5dbj|AP002069.2| Oryza sativa (japonica cultivar-group) genomic D... 64 4e-07
6ref|XM_476311.1| Oryza sativa (japonica cultivar-group), predic... 46 0.10
7emb|AL732499.6| Zebrafish DNA sequence from clone RP71-1C3 in li... 46 0.10
8dbj|AK102979.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.10
9gb|AY389498.1| Mus musculus protein phosphatase 2A B56gamma4 sub... 44 0.40
10gb|AC152827.4| Mus musculus BAC clone RP23-60K23 from chromosome... 44 0.40
11dbj|AK034872.1| Mus musculus 12 days embryo embryonic body betwe... 44 0.40
12dbj|AK201559.1| Mus musculus cDNA, clone:Y1G0138K04, strand:minu... 44 0.40
13dbj|AK178752.1| Mus musculus cDNA, clone:Y0G0107M15, strand:minu... 44 0.40
14emb|AL773556.1| Mouse DNA sequence from clone RP23-273C6 on chro... 44 0.40
15gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, co... 42 1.6
16emb|CR388047.20| Zebrafish DNA sequence from clone DKEY-244D13, ... 42 1.6
17emb|BX640443.1| Bordetella bronchiseptica strain RB50, complete ... 42 1.6
18emb|BX640428.1| Bordetella parapertussis strain 12822, complete ... 42 1.6
19emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromos... 42 1.6
20gb|AY119663.1| Drosophila melanogaster SD07726 full insert cDNA 42 1.6
21ref|NM_175954.1| Drosophila melanogaster CG33123-PA (CG33123) mR... 42 1.6
22gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, comp... 42 1.6
23gb|AC009751.6|AC009751 Drosophila melanogaster, chromosome 2L, r... 42 1.6
24gb|AC008323.3|AC008323 Drosophila melanogaster, chromosome 2L, r... 42 1.6
25gb|AE003579.3| Drosophila melanogaster chromosome 2L, section 12... 42 1.6
26ref|NM_114592.3| Arabidopsis thaliana unknown protein AT3G47250 ... 40 6.3
27ref|NM_180331.1| Arabidopsis thaliana unknown protein AT3G47250 ... 40 6.3
28ref|NM_180330.1| Arabidopsis thaliana unknown protein AT3G47250 ... 40 6.3
29ref|NM_185692.1| Oryza sativa (japonica cultivar-group), Ozsa804... 40 6.3
30ref|XM_476309.1| Oryza sativa (japonica cultivar-group), predic... 40 6.3
31ref|XM_426275.1| PREDICTED: Gallus gallus similar to Gab3 protei... 40 6.3
32ref|XM_952340.1| Neurospora crassa OR74A hypothetical protein (N... 40 6.3
33ref|XM_327493.1| Neurospora crassa OR74A hypothetical protein (N... 40 6.3
34gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 6.3
35gb|AC092610.1| Homo sapiens BAC clone RP11-160E17 from 7, comple... 40 6.3
36emb|BX927075.13| Zebrafish DNA sequence from clone CH211-234G3 i... 40 6.3
37gb|AY096508.1| Arabidopsis thaliana unknown protein (At3g47250) ... 40 6.3
38gb|AY065203.1| Arabidopsis thaliana unknown protein (At3g47250) ... 40 6.3
39emb|BX294027.1|NCB8G12 Neurospora crassa DNA linkage group V BAC... 40 6.3
40emb|AL096860.1|ATT21L8 Arabidopsis thaliana DNA chromosome 3, BA... 40 6.3
41emb|AL133292.3|ATF13I12 Arabidopsis thaliana DNA chromosome 3, B... 40 6.3
42gb|AY140046.1| Arabidopsis thaliana unknown protein mRNA, comple... 40 6.3
43dbj|AP007171.1| Aspergillus oryzae RIB40 genomic DNA, SC011 40 6.3
44gb|AC093599.6| Homo sapiens BAC clone RP11-285C1 from 4, complet... 40 6.3
45gb|AC090485.3|AC090485 Genomic Sequence for Oryza sativa, Nippon... 40 6.3
46dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
47emb|BX822647.1|CNS0A720 Arabidopsis thaliana Full-length cDNA Co... 40 6.3
48gb|AC171012.3| Gallus gallus BAC clone CH261-128I7 from chromoso... 40 6.3
49dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, comp... 40 6.3
50emb|AL672147.10| Mouse DNA sequence from clone RP23-434N14 on ch... 40 6.3
51emb|AJ291316.1|OCU291316 Oryctolagus cuniculus partial mRNA for ... 40 6.3
52dbj|AP000886.3| Homo sapiens genomic DNA, chromosome 6q25.2, clo... 40 6.3
53dbj|AP003699.1| Homo sapiens genomic DNA, chromosome 6q25, clone... 40 6.3 
>ref|NM_185693.1| Oryza sativa (japonica cultivar-group), Ozsa8044 predicted mRNA
          Length = 1059

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 47/52 (90%)
 Strand = Plus / Plus

                                                               
Query: 173 ctccgagatgcccgagcccatccccatcatcgacctcagccggctctctgcc 224
           |||||| ||||| |||||||||||| || |||||||||||||||| ||||||
Sbjct: 126 ctccgacatgcctgagcccatccccgtcgtcgacctcagccggctgtctgcc 177
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>ref|XM_476310.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 942

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 47/52 (90%)
 Strand = Plus / Plus

                                                               
Query: 173 ctccgagatgcccgagcccatccccatcatcgacctcagccggctctctgcc 224
           |||||| ||||| |||||||||||| || |||||||||||||||| ||||||
Sbjct: 126 ctccgacatgcctgagcccatccccgtcgtcgacctcagccggctgtctgcc 177
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 47/52 (90%)
 Strand = Plus / Plus

                                                                   
Query: 173     ctccgagatgcccgagcccatccccatcatcgacctcagccggctctctgcc 224
               |||||| ||||| |||||||||||| || |||||||||||||||| ||||||
Sbjct: 3907430 ctccgacatgcctgagcccatccccgtcgtcgacctcagccggctgtctgcc 3907481



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 47/52 (90%)
 Strand = Plus / Plus

                                                                   
Query: 173     ctccgagatgcccgagcccatccccatcatcgacctcagccggctctctgcc 224
               |||||| ||||| |||||||||||| || |||||||||||||||| ||||||
Sbjct: 3857551 ctccgacatgcctgagcccatccccgtcgtcgacctcagccggctgtctgcc 3857602



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                              
Query: 104     cgccggcgtgaaggagccaccgagccagtac 134
               |||||||||| ||||||||||||||| ||||
Sbjct: 3911444 cgccggcgtgcaggagccaccgagccggtac 3911474



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                   
Query: 105     gccggcgtgaaggagccaccgagccagtacgtgctt 140
               ||||||||  ||||||||||||| | ||||||||||
Sbjct: 3904538 gccggcgtcgaggagccaccgagtcggtacgtgctt 3904573



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                   
Query: 105     gccggcgtgaaggagccaccgagccagtacgtgctt 140
               ||||||||  ||||||||||||| | ||||||||||
Sbjct: 3892715 gccggcgtcgaggagccaccgagtcggtacgtgctt 3892750



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                   
Query: 105     gccggcgtgaaggagccaccgagccagtacgtgctt 140
               ||||||||  ||||||||||||| | ||||||||||
Sbjct: 3854659 gccggcgtcgaggagccaccgagtcggtacgtgctt 3854694
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>dbj|AP003019.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0035I03
          Length = 153749

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 47/52 (90%)
 Strand = Plus / Plus

                                                                 
Query: 173   ctccgagatgcccgagcccatccccatcatcgacctcagccggctctctgcc 224
             |||||| ||||| |||||||||||| || |||||||||||||||| ||||||
Sbjct: 13306 ctccgacatgcctgagcccatccccgtcgtcgacctcagccggctgtctgcc 13357



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                            
Query: 104   cgccggcgtgaaggagccaccgagccagtac 134
             |||||||||| ||||||||||||||| ||||
Sbjct: 17320 cgccggcgtgcaggagccaccgagccggtac 17350



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                 
Query: 105   gccggcgtgaaggagccaccgagccagtacgtgctt 140
             ||||||||  ||||||||||||| | ||||||||||
Sbjct: 10414 gccggcgtcgaggagccaccgagtcggtacgtgctt 10449
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>dbj|AP002069.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0015E04
          Length = 152046

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 47/52 (90%)
 Strand = Plus / Plus

                                                                  
Query: 173    ctccgagatgcccgagcccatccccatcatcgacctcagccggctctctgcc 224
              |||||| ||||| |||||||||||| || |||||||||||||||| ||||||
Sbjct: 115505 ctccgacatgcctgagcccatccccgtcgtcgacctcagccggctgtctgcc 115556



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                  
Query: 105    gccggcgtgaaggagccaccgagccagtacgtgctt 140
              ||||||||  ||||||||||||| | ||||||||||
Sbjct: 150669 gccggcgtcgaggagccaccgagtcggtacgtgctt 150704



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                  
Query: 105    gccggcgtgaaggagccaccgagccagtacgtgctt 140
              ||||||||  ||||||||||||| | ||||||||||
Sbjct: 112613 gccggcgtcgaggagccaccgagtcggtacgtgctt 112648
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>ref|XM_476311.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1065

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 104 cgccggcgtgaaggagccaccgagccagtac 134
           |||||||||| ||||||||||||||| ||||
Sbjct: 48  cgccggcgtgcaggagccaccgagccggtac 78
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>emb|AL732499.6| Zebrafish DNA sequence from clone RP71-1C3 in linkage group 19 Contains
              part of a novel gene similar to CSMD (CUB and sushi
              multiple domains protein), complete sequence
          Length = 161104

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                         
Query: 362    agaagagaaacaaaagtactcaaacat 388
              |||||||||||||||||||||| ||||
Sbjct: 149274 agaagagaaacaaaagtactcacacat 149300
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>dbj|AK102979.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033115N23, full
           insert sequence
          Length = 1303

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 104 cgccggcgtgaaggagccaccgagccagtac 134
           |||||||||| ||||||||||||||| ||||
Sbjct: 143 cgccggcgtgcaggagccaccgagccggtac 173
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>gb|AY389498.1| Mus musculus protein phosphatase 2A B56gamma4 subunit mRNA, partial
           cds
          Length = 996

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 36  catggcttttctcccgaccaac 57
           ||||||||||||||||||||||
Sbjct: 489 catggcttttctcccgaccaac 468
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>gb|AC152827.4| Mus musculus BAC clone RP23-60K23 from chromosome 12, complete sequence
          Length = 195066

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 36    catggcttttctcccgaccaac 57
             ||||||||||||||||||||||
Sbjct: 80024 catggcttttctcccgaccaac 80003
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>dbj|AK034872.1| Mus musculus 12 days embryo embryonic body between diaphragm region
           and neck cDNA, RIKEN full-length enriched library,
           clone:9430052D19 product:unclassifiable, full insert
           sequence
          Length = 2682

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 36  catggcttttctcccgaccaac 57
           ||||||||||||||||||||||
Sbjct: 855 catggcttttctcccgaccaac 834
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>dbj|AK201559.1| Mus musculus cDNA, clone:Y1G0138K04, strand:minus,
           reference:ENSEMBL:Mouse-Transcript-
           ENST:ENSMUST00000017987, based on BLAT search
          Length = 311

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 36  catggcttttctcccgaccaac 57
           ||||||||||||||||||||||
Sbjct: 223 catggcttttctcccgaccaac 202
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>dbj|AK178752.1| Mus musculus cDNA, clone:Y0G0107M15, strand:minus,
           reference:ENSEMBL:Mouse-Transcript-
           ENST:ENSMUST00000017987, based on BLAT search
          Length = 430

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 36  catggcttttctcccgaccaac 57
           ||||||||||||||||||||||
Sbjct: 342 catggcttttctcccgaccaac 321
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>emb|AL773556.1| Mouse DNA sequence from clone RP23-273C6 on chromosome 12, complete
             sequence
          Length = 57865

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 36    catggcttttctcccgaccaac 57
             ||||||||||||||||||||||
Sbjct: 34688 catggcttttctcccgaccaac 34667
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>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence
          Length = 3181762

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                            
Query: 233     cgaggagttcgacaagctgcggtccgcgt 261
               |||||||||||||||||||  ||||||||
Sbjct: 1232501 cgaggagttcgacaagctgtcgtccgcgt 1232473
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>emb|CR388047.20| Zebrafish DNA sequence from clone DKEY-244D13, complete sequence
          Length = 223119

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 357    tcaatagaagagaaacaaaag 377
              |||||||||||||||||||||
Sbjct: 186642 tcaatagaagagaaacaaaag 186622
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>emb|BX640443.1| Bordetella bronchiseptica strain RB50, complete genome; segment 7/16
          Length = 346274

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 224    cggcagcgccgaggagttcga 244
              |||||||||||||||||||||
Sbjct: 182766 cggcagcgccgaggagttcga 182786
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>emb|BX640428.1| Bordetella parapertussis strain 12822, complete genome; segment 6/14
          Length = 348525

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 224    cggcagcgccgaggagttcga 244
              |||||||||||||||||||||
Sbjct: 330146 cggcagcgccgaggagttcga 330166
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>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence
          Length = 3173005

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                            
Query: 233     cgaggagttcgacaagctgcggtccgcgt 261
               |||||||||||||||||||  ||||||||
Sbjct: 2548574 cgaggagttcgacaagctgtcgtccgcgt 2548546
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>gb|AY119663.1| Drosophila melanogaster SD07726 full insert cDNA
          Length = 3809

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 185  cgagcccatccccatcatcga 205
            |||||||||||||||||||||
Sbjct: 1397 cgagcccatccccatcatcga 1417
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>ref|NM_175954.1| Drosophila melanogaster CG33123-PA (CG33123) mRNA, complete cds
          Length = 3791

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 185  cgagcccatccccatcatcga 205
            |||||||||||||||||||||
Sbjct: 1408 cgagcccatccccatcatcga 1428
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>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence
          Length = 2325379

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 233    cgaggagttcgacaagctgcggtccgcgt 261
              |||||||||||||||||||  ||||||||
Sbjct: 214401 cgaggagttcgacaagctgtcgtccgcgt 214429
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>gb|AC009751.6|AC009751 Drosophila melanogaster, chromosome 2L, region 23F-24A, BAC clone
              BACR26A07, complete sequence
          Length = 172436

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 185    cgagcccatccccatcatcga 205
              |||||||||||||||||||||
Sbjct: 170384 cgagcccatccccatcatcga 170364
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>gb|AC008323.3|AC008323 Drosophila melanogaster, chromosome 2L, region 24D-24D, BAC clone
             BACR03G07, complete sequence
          Length = 170064

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 185   cgagcccatccccatcatcga 205
             |||||||||||||||||||||
Sbjct: 58306 cgagcccatccccatcatcga 58286
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>gb|AE003579.3| Drosophila melanogaster chromosome 2L, section 12 of 83 of the complete
             sequence
          Length = 304674

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 185   cgagcccatccccatcatcga 205
             |||||||||||||||||||||
Sbjct: 81523 cgagcccatccccatcatcga 81503
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>ref|NM_114592.3| Arabidopsis thaliana unknown protein AT3G47250 transcript variant
           AT3G47250.1 mRNA, complete cds
          Length = 1820

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 345 ttcttcaacctctcaataga 364
           ||||||||||||||||||||
Sbjct: 812 ttcttcaacctctcaataga 831
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>ref|NM_180331.1| Arabidopsis thaliana unknown protein AT3G47250 transcript variant
           AT3G47250.3 mRNA, complete cds
          Length = 1749

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 345 ttcttcaacctctcaataga 364
           ||||||||||||||||||||
Sbjct: 741 ttcttcaacctctcaataga 760
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>ref|NM_180330.1| Arabidopsis thaliana unknown protein AT3G47250 transcript variant
           AT3G47250.2 mRNA, complete cds
          Length = 1772

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 345 ttcttcaacctctcaataga 364
           ||||||||||||||||||||
Sbjct: 764 ttcttcaacctctcaataga 783
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>ref|NM_185692.1| Oryza sativa (japonica cultivar-group), Ozsa8043 predicted mRNA
          Length = 1164

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 105 gccggcgtgaaggagccaccgagccagtacgtgctt 140
           ||||||||  ||||||||||||| | ||||||||||
Sbjct: 52  gccggcgtcgaggagccaccgagtcggtacgtgctt 87
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>ref|XM_476309.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1053

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 105 gccggcgtgaaggagccaccgagccagtacgtgctt 140
           ||||||||  ||||||||||||| | ||||||||||
Sbjct: 52  gccggcgtcgaggagccaccgagtcggtacgtgctt 87
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>ref|XM_426275.1| PREDICTED: Gallus gallus similar to Gab3 protein; DOS/Gab family
            member 3 (LOC428717), mRNA
          Length = 2973

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 187  agcccatccccatcatcgacctca 210
            ||||||||| ||||||||||||||
Sbjct: 1376 agcccatccgcatcatcgacctca 1399
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>ref|XM_952340.1| Neurospora crassa OR74A hypothetical protein (NCU07208.1) partial
           mRNA
          Length = 696

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 230 cgccgaggagttcgacaagc 249
           ||||||||||||||||||||
Sbjct: 126 cgccgaggagttcgacaagc 145
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>ref|XM_327493.1| Neurospora crassa OR74A hypothetical protein (NCU07208.1) partial
           mRNA
          Length = 696

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 230 cgccgaggagttcgacaagc 249
           ||||||||||||||||||||
Sbjct: 126 cgccgaggagttcgacaagc 145
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 371     acaaaagtactcaaacattg 390
               ||||||||||||||||||||
Sbjct: 2641890 acaaaagtactcaaacattg 2641909
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>gb|AC092610.1| Homo sapiens BAC clone RP11-160E17 from 7, complete sequence
          Length = 162018

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 89    gcgagagcttgtgggcgccggcgt 112
             |||||||||||||||| |||||||
Sbjct: 37726 gcgagagcttgtgggccccggcgt 37749
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>emb|BX927075.13| Zebrafish DNA sequence from clone CH211-234G3 in linkage group 3,
             complete sequence
          Length = 182166

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 373   aaaagtactcaaacattgtc 392
             ||||||||||||||||||||
Sbjct: 72795 aaaagtactcaaacattgtc 72814
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>gb|AY096508.1| Arabidopsis thaliana unknown protein (At3g47250) mRNA, complete cds
          Length = 1474

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 345 ttcttcaacctctcaataga 364
           ||||||||||||||||||||
Sbjct: 682 ttcttcaacctctcaataga 701
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>gb|AY065203.1| Arabidopsis thaliana unknown protein (At3g47250) mRNA, complete cds
          Length = 1764

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 345 ttcttcaacctctcaataga 364
           ||||||||||||||||||||
Sbjct: 812 ttcttcaacctctcaataga 831
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>emb|BX294027.1|NCB8G12 Neurospora crassa DNA linkage group V BAC contig B8G12
          Length = 154038

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 230   cgccgaggagttcgacaagc 249
             ||||||||||||||||||||
Sbjct: 42535 cgccgaggagttcgacaagc 42516
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>emb|AL096860.1|ATT21L8 Arabidopsis thaliana DNA chromosome 3, BAC clone T21L8
          Length = 87224

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 345 ttcttcaacctctcaataga 364
           ||||||||||||||||||||
Sbjct: 306 ttcttcaacctctcaataga 287
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>emb|AL133292.3|ATF13I12 Arabidopsis thaliana DNA chromosome 3, BAC clone F13I12
          Length = 140680

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 345    ttcttcaacctctcaataga 364
              ||||||||||||||||||||
Sbjct: 118313 ttcttcaacctctcaataga 118294
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>gb|AY140046.1| Arabidopsis thaliana unknown protein mRNA, complete cds
          Length = 1722

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 345 ttcttcaacctctcaataga 364
           ||||||||||||||||||||
Sbjct: 764 ttcttcaacctctcaataga 783
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>dbj|AP007171.1| Aspergillus oryzae RIB40 genomic DNA, SC011
          Length = 2505489

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 224     cggcagcgccgaggagttcg 243
               ||||||||||||||||||||
Sbjct: 1736775 cggcagcgccgaggagttcg 1736794
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>gb|AC093599.6| Homo sapiens BAC clone RP11-285C1 from 4, complete sequence
          Length = 187937

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 16    gaaaactaacagcaagcaac 35
             ||||||||||||||||||||
Sbjct: 27180 gaaaactaacagcaagcaac 27161
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>gb|AC090485.3|AC090485 Genomic Sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0067N01, from chromosome 3, complete sequence
          Length = 159636

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 371   acaaaagtactcaaacattg 390
             ||||||||||||||||||||
Sbjct: 28204 acaaaagtactcaaacattg 28185
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 371     acaaaagtactcaaacattg 390
               ||||||||||||||||||||
Sbjct: 2642000 acaaaagtactcaaacattg 2642019
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>emb|BX822647.1|CNS0A720 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB56ZC08 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1606

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 345 ttcttcaacctctcaataga 364
           ||||||||||||||||||||
Sbjct: 725 ttcttcaacctctcaataga 744
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>gb|AC171012.3| Gallus gallus BAC clone CH261-128I7 from chromosome ul, complete
             sequence
          Length = 231142

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 187   agcccatccccatcatcgacctca 210
             ||||||||| ||||||||||||||
Sbjct: 67835 agcccatccgcatcatcgacctca 67858
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>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 241     tcgacaagctgcggtccgcgttgg 264
               |||||||||||||| |||||||||
Sbjct: 1942724 tcgacaagctgcgggccgcgttgg 1942701
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>emb|AL672147.10| Mouse DNA sequence from clone RP23-434N14 on chromosome X, complete
              sequence
          Length = 192252

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 366    gagaaacaaaagtactcaaa 385
              ||||||||||||||||||||
Sbjct: 179985 gagaaacaaaagtactcaaa 179966
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>emb|AJ291316.1|OCU291316 Oryctolagus cuniculus partial mRNA for KvLQT1 voltage-gated delayed
           rectifier potassium channel (kvLQT1 gene)
          Length = 463

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 187 agcccatccccatcatcgacctca 210
           |||||||| |||||||||||||||
Sbjct: 134 agcccatctccatcatcgacctca 157
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>dbj|AP000886.3| Homo sapiens genomic DNA, chromosome 6q25.2, clone:KB1750A9
          Length = 220495

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 306    cctagctttcttgccgaggc 325
              ||||||||||||||||||||
Sbjct: 193802 cctagctttcttgccgaggc 193783
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>dbj|AP003699.1| Homo sapiens genomic DNA, chromosome 6q25, clone: KB761D4, complete
             sequence
          Length = 110025

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 306   cctagctttcttgccgaggc 325
             ||||||||||||||||||||
Sbjct: 21436 cctagctttcttgccgaggc 21417


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,541,663
Number of Sequences: 3902068
Number of extensions: 3541663
Number of successful extensions: 71783
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 53
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 71390
Number of HSP's gapped (non-prelim): 393
length of query: 465
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 443
effective length of database: 17,147,199,772
effective search space: 7596209498996
effective search space used: 7596209498996
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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