>CN12L_MOUSE (Q8BFV2) CSN12-like protein|
          Length = 399

 Score = 48.1 bits (113), Expect = 2e-05
 Identities = 31/98 (31%), Positives = 48/98 (48%), Gaps = 3/98 (3%)
 Frame = +2

Query: 281 PHLSDFLPLLLRAIHSHSLRRFGDAYSSFEKAASAFLQEFR-NWETPWAMEAMHIVALEI 457
           P   +     LR  ++     F +AY        +FL+ F+ + E  WA+  M+ VAL++
Sbjct: 56  PPYDEMFAAHLRCTYAVGNHDFIEAYKCQTVIVQSFLRAFQAHKEENWALPVMYAVALDL 115

Query: 458 RLLAEKADRELVMSGKNP--DKLQAAGSFLMKVFGALA 565
           R+ A  AD++LV  GK+   D L+ A   LM  F   A
Sbjct: 116 RIFANNADQQLVKKGKSKVGDMLEKAAELLMSCFRVCA 153

>CN12L_HUMAN (Q5JVF3) CSN12-like protein|
          Length = 399

 Score = 47.8 bits (112), Expect = 2e-05
 Identities = 31/98 (31%), Positives = 48/98 (48%), Gaps = 3/98 (3%)
 Frame = +2

Query: 281 PHLSDFLPLLLRAIHSHSLRRFGDAYSSFEKAASAFLQEFR-NWETPWAMEAMHIVALEI 457
           P   +     LR  ++     F +AY        +FL+ F+ + E  WA+  M+ VAL++
Sbjct: 56  PPYDEMFAAHLRCTYAVGNHDFIEAYKCQTVIVQSFLRAFQAHKEENWALPVMYAVALDL 115

Query: 458 RLLAEKADRELVMSGKNP--DKLQAAGSFLMKVFGALA 565
           R+ A  AD++LV  GK+   D L+ A   LM  F   A
Sbjct: 116 RVFANNADQQLVKKGKSKVGDMLEKAAELLMSCFRVCA 153

>GWT1_CRYNE (Q5KBA2) GPI-anchored wall transfer protein 1 (EC 2.3.-.-)|
           (Inositol acyltransferase GWT1)
          Length = 598

 Score = 36.2 bits (82), Expect = 0.070
 Identities = 24/69 (34%), Positives = 33/69 (47%), Gaps = 9/69 (13%)
 Frame = -1

Query: 566 PQVPRKP---------SSGRTQQPAACLGSSRSSQALYLPSQLAA*SQAPLCASPPLPKE 414
           P+ P KP         S     +PA+  GS+  S A  LPSQ+A  S + L   P +   
Sbjct: 95  PRSPEKPKGQWLDESDSDEEPAEPASAAGSAAVSPAKLLPSQVAFASGSLLSTDPTISPM 154

Query: 413 SPSSGTPAG 387
           SPSS + +G
Sbjct: 155 SPSSSSSSG 163

>CSN12_USTMA (Q4P8T5) COP9 signalosome complex subunit 12|
          Length = 454

 Score = 33.9 bits (76), Expect = 0.35
 Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
 Frame = +2

Query: 341 RFGDAYSSFEKAASAFLQEFRNWETP--WAMEAMHIVALEIRLLAEKAD 481
           R G+A+ ++    SAF++ F    TP  WA+  + I+ L +R LA +AD
Sbjct: 101 RLGEAFDAYNSVVSAFVRYFSTL-TPGRWALPLLRILCLNLRWLAVQAD 148

>CBP_HUMAN (Q92793) CREB-binding protein (EC 2.3.1.48)|
          Length = 2442

 Score = 33.1 bits (74), Expect = 0.60
 Identities = 20/65 (30%), Positives = 27/65 (41%)
 Frame = -1

Query: 566  PQVPRKPSSGRTQQPAACLGSSRSSQALYLPSQLAA*SQAPLCASPPLPKESPSSGTPAG 387
            P  P  P S   Q P    GS  S+        + A +QA +   P  P + PS  TP  
Sbjct: 885  PTQPSTPVSSSGQTPTPTPGSVPSATQTQSTPTVQAAAQAQVTPQPQTPVQPPSVATPQS 944

Query: 386  TRWQP 372
            ++ QP
Sbjct: 945  SQQQP 949

>CBP_MOUSE (P45481) CREB-binding protein (EC 2.3.1.48)|
          Length = 2441

 Score = 31.2 bits (69), Expect = 2.3
 Identities = 22/69 (31%), Positives = 31/69 (44%), Gaps = 4/69 (5%)
 Frame = -1

Query: 566  PQVPRKPS----SGRTQQPAACLGSSRSSQALYLPSQLAA*SQAPLCASPPLPKESPSSG 399
            P  P +PS    SG+T  P    GS  S+        + A +QA +   P  P + PS  
Sbjct: 884  PAAPTQPSTPVSSGQTPTPTP--GSVPSAAQTQSTPTVQAAAQAQVTPQPQTPVQPPSVA 941

Query: 398  TPAGTRWQP 372
            TP  ++ QP
Sbjct: 942  TPQSSQQQP 950

>GWT1_CRYNV (Q873N0) GPI-anchored wall transfer protein 1 (EC 2.3.-.-)|
           (Inositol acyltransferase GWT1)
          Length = 598

 Score = 31.2 bits (69), Expect = 2.3
 Identities = 18/47 (38%), Positives = 25/47 (53%)
 Frame = -1

Query: 527 QPAACLGSSRSSQALYLPSQLAA*SQAPLCASPPLPKESPSSGTPAG 387
           +PA+  GS+  S    LPSQ+A  S + L   P     SPSS + +G
Sbjct: 117 EPASAAGSAAVSPVKLLPSQVAFASGSLLSPDPTTSPMSPSSSSASG 163

>GLND_CHRVO (Q7NTY6) [Protein-PII] uridylyltransferase (EC 2.7.7.59) (PII|
           uridylyl-transferase) (Uridylyl-removing enzyme) (UTase)
          Length = 856

 Score = 31.2 bits (69), Expect = 2.3
 Identities = 18/49 (36%), Positives = 25/49 (51%)
 Frame = +2

Query: 257 ARLAADRFPHLSDFLPLLLRAIHSHSLRRFGDAYSSFEKAASAFLQEFR 403
           A L   R P LS F P +LRA+  H   +  D + S  +  + F+Q FR
Sbjct: 350 AFLTLQRHPELSGFAPRMLRALW-HGRSQINDRFRSDPRNRATFMQIFR 397

>RD23B_MOUSE (P54728) UV excision repair protein RAD23 homolog B (mHR23B) (XP-C|
           repair-complementing complex 58 kDa protein) (p58)
          Length = 416

 Score = 30.8 bits (68), Expect = 3.0
 Identities = 20/56 (35%), Positives = 24/56 (42%)
 Frame = -1

Query: 551 KPSSGRTQQPAACLGSSRSSQALYLPSQLAA*SQAPLCASPPLPKESPSSGTPAGT 384
           KP +  T  PA    SS  S      S   A +QAP       P  +P+S TPA T
Sbjct: 76  KPKAVTTAVPATTQPSSTPSPTTVSSSPAVAAAQAPAPTPALAPTSTPASTTPAST 131

>TIF1G_MOUSE (Q99PP7) Transcription intermediary factor 1-gamma (TIF1-gamma)|
           (Tripartite motif protein 33)
          Length = 1142

 Score = 30.0 bits (66), Expect = 5.0
 Identities = 20/52 (38%), Positives = 25/52 (48%), Gaps = 6/52 (11%)
 Frame = -1

Query: 524 PAACLGSSRSSQALYLPSQLAA*SQAPLCASPPLPKESP------SSGTPAG 387
           PAA +GS+    A   P+  AA + AP  A  P P  +P      SSG P G
Sbjct: 81  PAASVGSAVPGGAASTPAPAAAPAPAPAPAPAPAPAPAPAPAPGSSSGPPLG 132

>MATK_MANZA (Q8M9A9) Maturase K (Intron maturase)|
          Length = 508

 Score = 30.0 bits (66), Expect = 5.0
 Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 6/54 (11%)
 Frame = +2

Query: 272 DRFPHLSDFLPLLLRAIHSHSLRRFGDAYSSFEKAASA------FLQEFRNWET 415
           D+FPHL+  L +L+  +HS  L         + K AS+      FL E+RNW +
Sbjct: 141 DKFPHLNYVLDILI--LHSIHLEILVQTLRYWVKDASSLHLLRFFLYEYRNWNS 192

>CS007_MOUSE (Q6ZPZ3) Zinc finger CCCH-type domain-containing protein C19orf7|
            homolog
          Length = 1304

 Score = 29.6 bits (65), Expect = 6.6
 Identities = 19/65 (29%), Positives = 29/65 (44%)
 Frame = -1

Query: 566  PQVPRKPSSGRTQQPAACLGSSRSSQALYLPSQLAA*SQAPLCASPPLPKESPSSGTPAG 387
            P+V + P+  R Q+PA  + +SR+++              P  ASPP    S  S  PA 
Sbjct: 1072 PRVRKTPTDPRLQKPADPVAASRAAK------------PCPTEASPPAASPSGDSSPPAT 1119

Query: 386  TRWQP 372
              + P
Sbjct: 1120 APYDP 1124

>DLPA_LEGPH (Q48806) Protein dlpA|
          Length = 615

 Score = 29.3 bits (64), Expect = 8.6
 Identities = 24/89 (26%), Positives = 41/89 (46%), Gaps = 11/89 (12%)
 Frame = +2

Query: 347 GDAYSSFEKAASAFLQEFRNWETPWAMEAMHIVALE----IRLLAEKADRELVMSGK--- 505
           G  Y    KA  + L E ++W+T  A EA   + L+    +  L + A +  + +G    
Sbjct: 142 GFDYFPLPKAIHSLLAESQHWQTIPADEASCALRLQSKSGLTRLFDFAFKHAMQTGMPRV 201

Query: 506 ----NPDKLQAAGSFLMKVFGALAVKGPK 580
                P+ L+ +G F  K+F + A + PK
Sbjct: 202 TLADKPNVLRESGEFTRKIFESTAQRYPK 230

>CSN12_CRYNE (Q5KAS8) COP9 signalosome complex subunit 12|
          Length = 403

 Score = 29.3 bits (64), Expect = 8.6
 Identities = 19/80 (23%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
 Frame = +2

Query: 329 HSLRRFGDAYSSFEKAASAFLQEFRNWETPWAMEAMHIVALEIRLLAEKADREL-VMSGK 505
           +  + + +A++  +K  S F + F + ++ W +  ++++  ++R LAE+AD+ +   +GK
Sbjct: 74  YKTKDYTEAFNQQDKLLSLFYRWFVD-QSSWVLPVLYMMLSDLRDLAEQADQTIHAETGK 132

Query: 506 NPDKLQAAGSFLMKVFGALA 565
            P  L+     + K F   A
Sbjct: 133 MP-SLEICTRTVSKAFSLCA 151


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 55,924,463
Number of Sequences: 219361
Number of extensions: 919304
Number of successful extensions: 3630
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 3434
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3624
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4986986160
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)