ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart45h01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_473864.1| Oryza sativa (japonica cultivar-group), predic... 599 e-168
2dbj|AK104427.1| Oryza sativa (japonica cultivar-group) cDNA clon... 599 e-168
3dbj|AK099008.1| Oryza sativa (japonica cultivar-group) cDNA clon... 599 e-168
4dbj|AK060707.1| Oryza sativa (japonica cultivar-group) cDNA clon... 599 e-168
5dbj|AB042115.1| Oryza sativa (japonica cultivar-group) cope1 mRN... 599 e-168
6gb|AF216853.1|AF216853 Zea mays epsilon-COP mRNA, complete cds 577 e-161
7gb|AY105373.1| Zea mays PCO148993 mRNA sequence 577 e-161
8gb|BT016527.1| Zea mays clone Contig360 mRNA sequence 569 e-159
9emb|AL731610.4|OSJN00255 Oryza sativa genomic DNA, chromosome 4,... 252 1e-63
10dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 252 1e-63
11gb|AY530950.1| Zea mays putative zinc finger protein (Z438D03.1)... 200 4e-48
12dbj|AB042113.1| Glycine max cope1 mRNA for epsilon1-COP, complet... 78 4e-11
13ref|XM_474096.1| Oryza sativa (japonica cultivar-group), predic... 66 1e-07
14ref|XM_465338.1| Oryza sativa (japonica cultivar-group), mRNA 52 0.002
15emb|AJ866984.1| Medicago truncatula mRNA for coatomer epsilon su... 52 0.002
16dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 52 0.002
17dbj|AP005865.3| Oryza sativa (japonica cultivar-group) genomic D... 52 0.002
18dbj|AP004177.3| Oryza sativa (japonica cultivar-group) genomic D... 52 0.002
19gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, com... 48 0.032
20ref|NM_129037.3| Arabidopsis thaliana protein transporter AT2G34... 44 0.51
21gb|AY142051.1| Arabidopsis thaliana At2g34840/F19I3.7 mRNA, comp... 44 0.51
22emb|AJ720775.1| Gallus gallus mRNA for hypothetical protein, clo... 44 0.51
23ref|NM_001006339.1| Gallus gallus coatomer protein complex, subu... 44 0.51
24gb|AY075627.1| Arabidopsis thaliana At2g34840/F19I3.7 mRNA, comp... 44 0.51
25dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.51
26gb|AC106742.3| Homo sapiens chromosome 16 clone RP11-1136G4, com... 44 0.51
27dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 44 0.51
28dbj|AP005167.4| Oryza sativa (japonica cultivar-group) genomic D... 44 0.51
29dbj|AK068606.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.51
30emb|AL732331.2| Oryza sativa genomic DNA, chromosome 4, BAC clon... 44 0.51
31gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, co... 44 0.51
32emb|AL606454.3|OSJN00009 Oryza sativa genomic DNA, chromosome 4,... 44 0.51
33gb|DQ182118.1| Uncultured bacterium clone SRP17 putative nitrite... 42 2.0
34gb|AC152945.1| Mus musculus 10 BAC RP23-257F18 (Roswell Park Can... 42 2.0
35gb|AC159473.7| Mus musculus 10 BAC RP23-215E23 (Roswell Park Can... 42 2.0
36dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete g... 42 2.0
37emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,comp... 42 2.0
38ref|XM_466314.1| Oryza sativa (japonica cultivar-group), mRNA 40 7.9
39ref|NM_193877.1| Oryza sativa (japonica cultivar-group), predic... 40 7.9
40gb|AY661566.1| Saccharopolyspora erythraea polyketide synthase g... 40 7.9
41gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete ... 40 7.9
42gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, co... 40 7.9
43gb|BT014249.1| Lycopersicon esculentum clone 133451F, mRNA sequence 40 7.9
44ref|XM_849541.1| PREDICTED: Canis familiaris similar to TEA doma... 40 7.9
45ref|XM_785039.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 7.9
46emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromos... 40 7.9
47gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome 40 7.9
48gb|AC004238.3| Arabidopsis thaliana chromosome 2 clone F19I3 map... 40 7.9
49gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, comple... 40 7.9
50gb|AE016818.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10... 40 7.9
51gb|AC006936.17|AC006936 Drosophila melanogaster, chromosome 3R, ... 40 7.9
52gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, comp... 40 7.9
53gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete g... 40 7.9
54dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.9
55emb|BX324215.14| Zebrafish DNA sequence from clone DKEY-42L16 in... 40 7.9
56gb|AC016132.4|AC016132 Drosophila melanogaster, chromosome 3R, r... 40 7.9
57dbj|AB186127.1| Oryza sativa (japonica cultivar-group) mRNA for ... 40 7.9
58gb|AC105186.14| Homo sapiens chromosome 8, clone CTD-2323A1, com... 40 7.9
59gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 7.9
60dbj|AP006068.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.9
61dbj|AP006060.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.9
62dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 40 7.9
63dbj|AP003204.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.9
64dbj|AP002968.2| Oryza sativa (japonica cultivar-group) genomic D... 40 7.9
65dbj|AP005775.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.9
66dbj|AP006069.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.9
67emb|X62569.1|SEERYABS S.erythraea eryA gene for 6-deoxyerythrono... 40 7.9
68dbj|AK107582.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.9
69ref|NM_210351.1| Eremothecium gossypii AER138Cp (AER138C), mRNA 40 7.9
70dbj|AK068106.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.9
71emb|AL831726.11| Zebrafish DNA sequence from clone DKEY-49N23 in... 40 7.9
72gb|AE003735.2| Drosophila melanogaster chromosome 3R, section 73... 40 7.9
73dbj|AB088224.1| Streptomyces rochei plasmid pSLA2-L DNA, complet... 40 7.9
74gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome 40 7.9
75gb|M63677.1|SERERYAB S.erythraea second and third ORF's of eryA ... 40 7.9
76dbj|AB042114.1| Glycine max cope2 mRNA for epsilon2-COP, partial... 40 7.9 
>ref|XM_473864.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 864

 Score =  599 bits (302), Expect = e-168
 Identities = 407/442 (92%)
 Strand = Plus / Plus

                                                                       
Query: 130 cccccgacctcctcttcaacctgcgcaacctcttctacctcggcgcctaccagtccgcca 189
           |||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 8   ccccggacctcctcttcaacctgcgcaacctcttctacctcggcgcctaccaggccgcca 67

                                                                       
Query: 190 tcaacaacagcgacgtcccgggcctcgacgccgacgccgcggccgagcgcgacgtcatcg 249
           |||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||
Sbjct: 68  tcaacaacagcgacgtcccgggcctcgacgccgacgccgccgccgagcgcgacgccatcg 127

                                                                       
Query: 250 tcttccgctcctacatcgccctcggatcctaccagctggtgatcagcgagatcgactcgt 309
           |||||||||||||| |||| ||||| ||||||||| ||||||||||||||||||||||||
Sbjct: 128 tcttccgctcctacgtcgcgctcggctcctaccagttggtgatcagcgagatcgactcgt 187

                                                                       
Query: 310 cggcggcgacgtcgctgcaggccgtcaagctgctcgcgctctacctcaccggagacaagg 369
           | ||||||||||||||||||||||| |||||||||||||| |||||| ||||||||||||
Sbjct: 188 ccgcggcgacgtcgctgcaggccgtgaagctgctcgcgctgtacctctccggagacaagg 247

                                                                       
Query: 370 aaggtgcgatctccagcttgaaggaatggttgagtgattcagccataggaagcaatcctg 429
           || |||||||   |||  |||||||||||||||||||||| ||  | |||||||||||||
Sbjct: 248 aaagtgcgattgtcagtctgaaggaatggttgagtgattcggcggttggaagcaatcctg 307

                                                                       
Query: 430 ttctgcgattgattgatggaattatatttatgcatgagcaagactacaacgaggctctca 489
           |||| |||||||||| ||||||||||||||||||||||||||||||||  || |||||||
Sbjct: 308 ttctacgattgattgctggaattatatttatgcatgagcaagactacactgaagctctca 367

                                                                       
Query: 490 agcacacacatactgggggaactctggacctgcatgcactgaacgtccagatcttcctta 549
           ||||||||||  |||| ||||||||||||||||||||| |||| |||||||||||| |||
Sbjct: 368 agcacacacactctggtggaactctggacctgcatgcattgaatgtccagatcttcatta 427

                                 
Query: 550 agatgcaccgctcagattatgc 571
           |||||||||| ||||| |||||
Sbjct: 428 agatgcaccgttcagactatgc 449
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>dbj|AK104427.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-A04, full
           insert sequence
          Length = 1207

 Score =  599 bits (302), Expect = e-168
 Identities = 407/442 (92%)
 Strand = Plus / Plus

                                                                       
Query: 130 cccccgacctcctcttcaacctgcgcaacctcttctacctcggcgcctaccagtccgcca 189
           |||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 140 ccccggacctcctcttcaacctgcgcaacctcttctacctcggcgcctaccaggccgcca 199

                                                                       
Query: 190 tcaacaacagcgacgtcccgggcctcgacgccgacgccgcggccgagcgcgacgtcatcg 249
           |||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||
Sbjct: 200 tcaacaacagcgacgtcccgggcctcgacgccgacgccgccgccgagcgcgacgccatcg 259

                                                                       
Query: 250 tcttccgctcctacatcgccctcggatcctaccagctggtgatcagcgagatcgactcgt 309
           |||||||||||||| |||| ||||| ||||||||| ||||||||||||||||||||||||
Sbjct: 260 tcttccgctcctacgtcgcgctcggctcctaccagttggtgatcagcgagatcgactcgt 319

                                                                       
Query: 310 cggcggcgacgtcgctgcaggccgtcaagctgctcgcgctctacctcaccggagacaagg 369
           | ||||||||||||||||||||||| |||||||||||||| |||||| ||||||||||||
Sbjct: 320 ccgcggcgacgtcgctgcaggccgtgaagctgctcgcgctgtacctctccggagacaagg 379

                                                                       
Query: 370 aaggtgcgatctccagcttgaaggaatggttgagtgattcagccataggaagcaatcctg 429
           || |||||||   |||  |||||||||||||||||||||| ||  | |||||||||||||
Sbjct: 380 aaagtgcgattgtcagtctgaaggaatggttgagtgattcggcggttggaagcaatcctg 439

                                                                       
Query: 430 ttctgcgattgattgatggaattatatttatgcatgagcaagactacaacgaggctctca 489
           |||| |||||||||| ||||||||||||||||||||||||||||||||  || |||||||
Sbjct: 440 ttctacgattgattgctggaattatatttatgcatgagcaagactacactgaagctctca 499

                                                                       
Query: 490 agcacacacatactgggggaactctggacctgcatgcactgaacgtccagatcttcctta 549
           ||||||||||  |||| ||||||||||||||||||||| |||| |||||||||||| |||
Sbjct: 500 agcacacacactctggtggaactctggacctgcatgcattgaatgtccagatcttcatta 559

                                 
Query: 550 agatgcaccgctcagattatgc 571
           |||||||||| ||||| |||||
Sbjct: 560 agatgcaccgttcagactatgc 581
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>dbj|AK099008.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013120E14, full
           insert sequence
          Length = 1218

 Score =  599 bits (302), Expect = e-168
 Identities = 407/442 (92%)
 Strand = Plus / Plus

                                                                       
Query: 130 cccccgacctcctcttcaacctgcgcaacctcttctacctcggcgcctaccagtccgcca 189
           |||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 113 ccccggacctcctcttcaacctgcgcaacctcttctacctcggcgcctaccaggccgcca 172

                                                                       
Query: 190 tcaacaacagcgacgtcccgggcctcgacgccgacgccgcggccgagcgcgacgtcatcg 249
           |||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||
Sbjct: 173 tcaacaacagcgacgtcccgggcctcgacgccgacgccgccgccgagcgcgacgccatcg 232

                                                                       
Query: 250 tcttccgctcctacatcgccctcggatcctaccagctggtgatcagcgagatcgactcgt 309
           |||||||||||||| |||| ||||| ||||||||| ||||||||||||||||||||||||
Sbjct: 233 tcttccgctcctacgtcgcgctcggctcctaccagttggtgatcagcgagatcgactcgt 292

                                                                       
Query: 310 cggcggcgacgtcgctgcaggccgtcaagctgctcgcgctctacctcaccggagacaagg 369
           | ||||||||||||||||||||||| |||||||||||||| |||||| ||||||||||||
Sbjct: 293 ccgcggcgacgtcgctgcaggccgtgaagctgctcgcgctgtacctctccggagacaagg 352

                                                                       
Query: 370 aaggtgcgatctccagcttgaaggaatggttgagtgattcagccataggaagcaatcctg 429
           || |||||||   |||  |||||||||||||||||||||| ||  | |||||||||||||
Sbjct: 353 aaagtgcgattgtcagtctgaaggaatggttgagtgattcggcggttggaagcaatcctg 412

                                                                       
Query: 430 ttctgcgattgattgatggaattatatttatgcatgagcaagactacaacgaggctctca 489
           |||| |||||||||| ||||||||||||||||||||||||||||||||  || |||||||
Sbjct: 413 ttctacgattgattgctggaattatatttatgcatgagcaagactacactgaagctctca 472

                                                                       
Query: 490 agcacacacatactgggggaactctggacctgcatgcactgaacgtccagatcttcctta 549
           ||||||||||  |||| ||||||||||||||||||||| |||| |||||||||||| |||
Sbjct: 473 agcacacacactctggtggaactctggacctgcatgcattgaatgtccagatcttcatta 532

                                 
Query: 550 agatgcaccgctcagattatgc 571
           |||||||||| ||||| |||||
Sbjct: 533 agatgcaccgttcagactatgc 554
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>dbj|AK060707.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-030-H03, full
           insert sequence
          Length = 1262

 Score =  599 bits (302), Expect = e-168
 Identities = 407/442 (92%)
 Strand = Plus / Plus

                                                                       
Query: 130 cccccgacctcctcttcaacctgcgcaacctcttctacctcggcgcctaccagtccgcca 189
           |||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 138 ccccggacctcctcttcaacctgcgcaacctcttctacctcggcgcctaccaggccgcca 197

                                                                       
Query: 190 tcaacaacagcgacgtcccgggcctcgacgccgacgccgcggccgagcgcgacgtcatcg 249
           |||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||
Sbjct: 198 tcaacaacagcgacgtcccgggcctcgacgccgacgccgccgccgagcgcgacgccatcg 257

                                                                       
Query: 250 tcttccgctcctacatcgccctcggatcctaccagctggtgatcagcgagatcgactcgt 309
           |||||||||||||| |||| ||||| ||||||||| ||||||||||||||||||||||||
Sbjct: 258 tcttccgctcctacgtcgcgctcggctcctaccagttggtgatcagcgagatcgactcgt 317

                                                                       
Query: 310 cggcggcgacgtcgctgcaggccgtcaagctgctcgcgctctacctcaccggagacaagg 369
           | ||||||||||||||||||||||| |||||||||||||| |||||| ||||||||||||
Sbjct: 318 ccgcggcgacgtcgctgcaggccgtgaagctgctcgcgctgtacctctccggagacaagg 377

                                                                       
Query: 370 aaggtgcgatctccagcttgaaggaatggttgagtgattcagccataggaagcaatcctg 429
           || |||||||   |||  |||||||||||||||||||||| ||  | |||||||||||||
Sbjct: 378 aaagtgcgattgtcagtctgaaggaatggttgagtgattcggcggttggaagcaatcctg 437

                                                                       
Query: 430 ttctgcgattgattgatggaattatatttatgcatgagcaagactacaacgaggctctca 489
           |||| |||||||||| ||||||||||||||||||||||||||||||||  || |||||||
Sbjct: 438 ttctacgattgattgctggaattatatttatgcatgagcaagactacactgaagctctca 497

                                                                       
Query: 490 agcacacacatactgggggaactctggacctgcatgcactgaacgtccagatcttcctta 549
           ||||||||||  |||| ||||||||||||||||||||| |||| |||||||||||| |||
Sbjct: 498 agcacacacactctggtggaactctggacctgcatgcattgaatgtccagatcttcatta 557

                                 
Query: 550 agatgcaccgctcagattatgc 571
           |||||||||| ||||| |||||
Sbjct: 558 agatgcaccgttcagactatgc 579
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>dbj|AB042115.1| Oryza sativa (japonica cultivar-group) cope1 mRNA for epsilon1-COP,
           complete cds
          Length = 1207

 Score =  599 bits (302), Expect = e-168
 Identities = 407/442 (92%)
 Strand = Plus / Plus

                                                                       
Query: 130 cccccgacctcctcttcaacctgcgcaacctcttctacctcggcgcctaccagtccgcca 189
           |||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 130 ccccggacctcctcttcaacctgcgcaacctcttctacctcggcgcctaccaggccgcca 189

                                                                       
Query: 190 tcaacaacagcgacgtcccgggcctcgacgccgacgccgcggccgagcgcgacgtcatcg 249
           |||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||
Sbjct: 190 tcaacaacagcgacgtcccgggcctcgacgccgacgccgccgccgagcgcgacgccatcg 249

                                                                       
Query: 250 tcttccgctcctacatcgccctcggatcctaccagctggtgatcagcgagatcgactcgt 309
           |||||||||||||| |||| ||||| ||||||||| ||||||||||||||||||||||||
Sbjct: 250 tcttccgctcctacgtcgcgctcggctcctaccagttggtgatcagcgagatcgactcgt 309

                                                                       
Query: 310 cggcggcgacgtcgctgcaggccgtcaagctgctcgcgctctacctcaccggagacaagg 369
           | ||||||||||||||||||||||| |||||||||||||| |||||| ||||||||||||
Sbjct: 310 ccgcggcgacgtcgctgcaggccgtgaagctgctcgcgctgtacctctccggagacaagg 369

                                                                       
Query: 370 aaggtgcgatctccagcttgaaggaatggttgagtgattcagccataggaagcaatcctg 429
           || |||||||   |||  |||||||||||||||||||||| ||  | |||||||||||||
Sbjct: 370 aaagtgcgattgtcagtctgaaggaatggttgagtgattcggcggttggaagcaatcctg 429

                                                                       
Query: 430 ttctgcgattgattgatggaattatatttatgcatgagcaagactacaacgaggctctca 489
           |||| |||||||||| ||||||||||||||||||||||||||||||||  || |||||||
Sbjct: 430 ttctacgattgattgctggaattatatttatgcatgagcaagactacactgaagctctca 489

                                                                       
Query: 490 agcacacacatactgggggaactctggacctgcatgcactgaacgtccagatcttcctta 549
           ||||||||||  |||| ||||||||||||||||||||| |||| |||||||||||| |||
Sbjct: 490 agcacacacactctggtggaactctggacctgcatgcattgaatgtccagatcttcatta 549

                                 
Query: 550 agatgcaccgctcagattatgc 571
           |||||||||| ||||| |||||
Sbjct: 550 agatgcaccgttcagactatgc 571
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>gb|AF216853.1|AF216853 Zea mays epsilon-COP mRNA, complete cds
          Length = 1180

 Score =  577 bits (291), Expect = e-161
 Identities = 414/455 (90%)
 Strand = Plus / Plus

                                                                       
Query: 120 gcgatggccacccccgacctcctcttcaacctgcgcaacctcttctacctcggcgcctac 179
           ||||||||| |||||||||| |||||||| ||||| |||||||||||||| |||||||||
Sbjct: 101 gcgatggcctcccccgacctgctcttcaatctgcggaacctcttctacctgggcgcctac 160

                                                                       
Query: 180 cagtccgccatcaacaacagcgacgtcccgggcctcgacgccgacgccgcggccgagcgc 239
           ||| | |||||||||||||||||||||||||||||||||||||||||||| || ||||||
Sbjct: 161 caggcagccatcaacaacagcgacgtcccgggcctcgacgccgacgccgccgctgagcgc 220

                                                                       
Query: 240 gacgtcatcgtcttccgctcctacatcgccctcggatcctaccagctggtgatcagcgag 299
           |||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 221 gacgccatcgtcttccgctcctacatcgccctcggctcctaccagctggtgatcagcgag 280

                                                                       
Query: 300 atcgactcgtcggcggcgacgtcgctgcaggccgtcaagctgctcgcgctctacctcacc 359
           ||||||||||| || || || |||||||||||||| |||||||||||||| |||||||| 
Sbjct: 281 atcgactcgtcagccgctacctcgctgcaggccgtgaagctgctcgcgctgtacctcact 340

                                                                       
Query: 360 ggagacaaggaaggtgcgatctccagcttgaaggaatggttgagtgattcagccatagga 419
           ||||||||||||||||| ||||||||  | ||||||||||||||||||||||| || |||
Sbjct: 341 ggagacaaggaaggtgctatctccagtctcaaggaatggttgagtgattcagcaattgga 400

                                                                       
Query: 420 agcaatcctgttctgcgattgattgatggaattatatttatgcatgagcaagactacaac 479
           ||||||||||||||||| ||||||| ||||||| |||||||||||||||| |||||||| 
Sbjct: 401 agcaatcctgttctgcggttgattgctggaattgtatttatgcatgagcaggactacaat 460

                                                                       
Query: 480 gaggctctcaagcacacacatactgggggaactctggacctgcatgcactgaacgtccag 539
           ||||||||||||||||||||  |||| |||||||||||  |||||||| |||| ||||||
Sbjct: 461 gaggctctcaagcacacacactctggaggaactctggatttgcatgcattgaatgtccag 520

                                              
Query: 540 atcttccttaagatgcaccgctcagattatgctga 574
           |||||| | |||||||| || ||||| ||||||||
Sbjct: 521 atcttcatcaagatgcatcgttcagactatgctga 555
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>gb|AY105373.1| Zea mays PCO148993 mRNA sequence
          Length = 1262

 Score =  577 bits (291), Expect = e-161
 Identities = 414/455 (90%)
 Strand = Plus / Plus

                                                                       
Query: 120 gcgatggccacccccgacctcctcttcaacctgcgcaacctcttctacctcggcgcctac 179
           ||||||||| |||||||||| |||||||| ||||| |||||||||||||| |||||||||
Sbjct: 101 gcgatggcctcccccgacctgctcttcaatctgcggaacctcttctacctgggcgcctac 160

                                                                       
Query: 180 cagtccgccatcaacaacagcgacgtcccgggcctcgacgccgacgccgcggccgagcgc 239
           ||| | |||||||||||||||||||||||||||||||||||||||||||| || ||||||
Sbjct: 161 caggcagccatcaacaacagcgacgtcccgggcctcgacgccgacgccgccgctgagcgc 220

                                                                       
Query: 240 gacgtcatcgtcttccgctcctacatcgccctcggatcctaccagctggtgatcagcgag 299
           |||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 221 gacgccatcgtcttccgctcctacatcgccctcggctcctaccagctggtgatcagcgag 280

                                                                       
Query: 300 atcgactcgtcggcggcgacgtcgctgcaggccgtcaagctgctcgcgctctacctcacc 359
           ||||||||||| || || || |||||||||||||| |||||||||||||| |||||||| 
Sbjct: 281 atcgactcgtcagccgctacctcgctgcaggccgtgaagctgctcgcgctgtacctcact 340

                                                                       
Query: 360 ggagacaaggaaggtgcgatctccagcttgaaggaatggttgagtgattcagccatagga 419
           ||||||||||||||||| ||||||||  | ||||||||||||||||||||||| || |||
Sbjct: 341 ggagacaaggaaggtgctatctccagtctcaaggaatggttgagtgattcagcaattgga 400

                                                                       
Query: 420 agcaatcctgttctgcgattgattgatggaattatatttatgcatgagcaagactacaac 479
           ||||||||||||||||| ||||||| ||||||| |||||||||||||||| |||||||| 
Sbjct: 401 agcaatcctgttctgcggttgattgctggaattgtatttatgcatgagcaggactacaat 460

                                                                       
Query: 480 gaggctctcaagcacacacatactgggggaactctggacctgcatgcactgaacgtccag 539
           ||||||||||||||||||||  |||| |||||||||||  |||||||| |||| ||||||
Sbjct: 461 gaggctctcaagcacacacactctggaggaactctggatttgcatgcattgaatgtccag 520

                                              
Query: 540 atcttccttaagatgcaccgctcagattatgctga 574
           |||||| | |||||||| || ||||| ||||||||
Sbjct: 521 atcttcatcaagatgcatcgttcagactatgctga 555
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>gb|BT016527.1| Zea mays clone Contig360 mRNA sequence
          Length = 1201

 Score =  569 bits (287), Expect = e-159
 Identities = 413/455 (90%)
 Strand = Plus / Plus

                                                                       
Query: 120 gcgatggccacccccgacctcctcttcaacctgcgcaacctcttctacctcggcgcctac 179
           ||||||||| |||||||||| |||||||| ||||| |||||||||||||| |||||||||
Sbjct: 111 gcgatggcctcccccgacctgctcttcaatctgcggaacctcttctacctgggcgcctac 170

                                                                       
Query: 180 cagtccgccatcaacaacagcgacgtcccgggcctcgacgccgacgccgcggccgagcgc 239
           ||| | |||||||||||||||||||||||||||||||||||||||||||| || ||||||
Sbjct: 171 caggcagccatcaacaacagcgacgtcccgggcctcgacgccgacgccgccgctgagcgc 230

                                                                       
Query: 240 gacgtcatcgtcttccgctcctacatcgccctcggatcctaccagctggtgatcagcgag 299
           |||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 231 gacgccatcgtcttccgctcctacatcgccctcggctcctaccagctggtgatcagcgag 290

                                                                       
Query: 300 atcgactcgtcggcggcgacgtcgctgcaggccgtcaagctgctcgcgctctacctcacc 359
           ||||||||||| || || || |||||||||||||| |||||||||||||| |||||||| 
Sbjct: 291 atcgactcgtcagccgctacctcgctgcaggccgtgaagctgctcgcgctgtacctcact 350

                                                                       
Query: 360 ggagacaaggaaggtgcgatctccagcttgaaggaatggttgagtgattcagccatagga 419
           ||||||||||||||||| ||||||||  | ||||| ||||||||||||||||| || |||
Sbjct: 351 ggagacaaggaaggtgctatctccagtctcaaggagtggttgagtgattcagcaattgga 410

                                                                       
Query: 420 agcaatcctgttctgcgattgattgatggaattatatttatgcatgagcaagactacaac 479
           ||||||||||||||| ||||||||| |||||||||||||||||||||||| |||||||| 
Sbjct: 411 agcaatcctgttctgagattgattgctggaattatatttatgcatgagcaggactacaat 470

                                                                       
Query: 480 gaggctctcaagcacacacatactgggggaactctggacctgcatgcactgaacgtccag 539
           ||||||||||| ||||||||  |||| |||||||||||  |||||||| |||| ||||||
Sbjct: 471 gaggctctcaaacacacacactctggaggaactctggatttgcatgcattgaatgtccag 530

                                              
Query: 540 atcttccttaagatgcaccgctcagattatgctga 574
           |||||| | |||||||| || ||||| ||||||||
Sbjct: 531 atcttcatcaagatgcatcgttcagactatgctga 565
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>emb|AL731610.4|OSJN00255 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0070C17,
             complete sequence
          Length = 160484

 Score =  252 bits (127), Expect = 1e-63
 Identities = 148/155 (95%)
 Strand = Plus / Minus

                                                                         
Query: 130   cccccgacctcctcttcaacctgcgcaacctcttctacctcggcgcctaccagtccgcca 189
             |||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 84730 ccccggacctcctcttcaacctgcgcaacctcttctacctcggcgcctaccaggccgcca 84671

                                                                         
Query: 190   tcaacaacagcgacgtcccgggcctcgacgccgacgccgcggccgagcgcgacgtcatcg 249
             |||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||
Sbjct: 84670 tcaacaacagcgacgtcccgggcctcgacgccgacgccgccgccgagcgcgacgccatcg 84611

                                                
Query: 250   tcttccgctcctacatcgccctcggatcctaccag 284
             |||||||||||||| |||| ||||| |||||||||
Sbjct: 84610 tcttccgctcctacgtcgcgctcggctcctaccag 84576



 Score =  170 bits (86), Expect = 3e-39
 Identities = 122/134 (91%)
 Strand = Plus / Minus

                                                                         
Query: 388   tgaaggaatggttgagtgattcagccataggaagcaatcctgttctgcgattgattgatg 447
             |||||||||||||||||||||| ||  | ||||||||||||||||| |||||||||| ||
Sbjct: 83408 tgaaggaatggttgagtgattcggcggttggaagcaatcctgttctacgattgattgctg 83349

                                                                         
Query: 448   gaattatatttatgcatgagcaagactacaacgaggctctcaagcacacacatactgggg 507
             ||||||||||||||||||||||||||||||  || |||||||||||||||||  |||| |
Sbjct: 83348 gaattatatttatgcatgagcaagactacactgaagctctcaagcacacacactctggtg 83289

                           
Query: 508   gaactctggacctg 521
             ||||||||||||||
Sbjct: 83288 gaactctggacctg 83275



 Score =  135 bits (68), Expect = 2e-28
 Identities = 80/84 (95%)
 Strand = Plus / Minus

                                                                         
Query: 286   tggtgatcagcgagatcgactcgtcggcggcgacgtcgctgcaggccgtcaagctgctcg 345
             ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||
Sbjct: 84470 tggtgatcagcgagatcgactcgtccgcggcgacgtcgctgcaggccgtgaagctgctcg 84411

                                     
Query: 346   cgctctacctcaccggagacaagg 369
             |||| |||||| ||||||||||||
Sbjct: 84410 cgctgtacctctccggagacaagg 84387



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 46/51 (90%)
 Strand = Plus / Minus

                                                                
Query: 521   gcatgcactgaacgtccagatcttccttaagatgcaccgctcagattatgc 571
             ||||||| |||| |||||||||||| ||||||||||||| ||||| |||||
Sbjct: 82697 gcatgcattgaatgtccagatcttcattaagatgcaccgttcagactatgc 82647
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  252 bits (127), Expect = 1e-63
 Identities = 148/155 (95%)
 Strand = Plus / Minus

                                                                            
Query: 130      cccccgacctcctcttcaacctgcgcaacctcttctacctcggcgcctaccagtccgcca 189
                |||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 31102649 ccccggacctcctcttcaacctgcgcaacctcttctacctcggcgcctaccaggccgcca 31102590

                                                                            
Query: 190      tcaacaacagcgacgtcccgggcctcgacgccgacgccgcggccgagcgcgacgtcatcg 249
                |||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||
Sbjct: 31102589 tcaacaacagcgacgtcccgggcctcgacgccgacgccgccgccgagcgcgacgccatcg 31102530

                                                   
Query: 250      tcttccgctcctacatcgccctcggatcctaccag 284
                |||||||||||||| |||| ||||| |||||||||
Sbjct: 31102529 tcttccgctcctacgtcgcgctcggctcctaccag 31102495



 Score =  170 bits (86), Expect = 3e-39
 Identities = 122/134 (91%)
 Strand = Plus / Minus

                                                                            
Query: 388      tgaaggaatggttgagtgattcagccataggaagcaatcctgttctgcgattgattgatg 447
                |||||||||||||||||||||| ||  | ||||||||||||||||| |||||||||| ||
Sbjct: 31101327 tgaaggaatggttgagtgattcggcggttggaagcaatcctgttctacgattgattgctg 31101268

                                                                            
Query: 448      gaattatatttatgcatgagcaagactacaacgaggctctcaagcacacacatactgggg 507
                ||||||||||||||||||||||||||||||  || |||||||||||||||||  |||| |
Sbjct: 31101267 gaattatatttatgcatgagcaagactacactgaagctctcaagcacacacactctggtg 31101208

                              
Query: 508      gaactctggacctg 521
                ||||||||||||||
Sbjct: 31101207 gaactctggacctg 31101194



 Score =  135 bits (68), Expect = 2e-28
 Identities = 80/84 (95%)
 Strand = Plus / Minus

                                                                            
Query: 286      tggtgatcagcgagatcgactcgtcggcggcgacgtcgctgcaggccgtcaagctgctcg 345
                ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||
Sbjct: 31102389 tggtgatcagcgagatcgactcgtccgcggcgacgtcgctgcaggccgtgaagctgctcg 31102330

                                        
Query: 346      cgctctacctcaccggagacaagg 369
                |||| |||||| ||||||||||||
Sbjct: 31102329 cgctgtacctctccggagacaagg 31102306



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 46/51 (90%)
 Strand = Plus / Minus

                                                                   
Query: 521      gcatgcactgaacgtccagatcttccttaagatgcaccgctcagattatgc 571
                ||||||| |||| |||||||||||| ||||||||||||| ||||| |||||
Sbjct: 31100616 gcatgcattgaatgtccagatcttcattaagatgcaccgttcagactatgc 31100566



 Score = 44.1 bits (22), Expect = 0.51
 Identities = 46/54 (85%)
 Strand = Plus / Plus

                                                                      
Query: 231      gccgagcgcgacgtcatcgtcttccgctcctacatcgccctcggatcctaccag 284
                ||||||||||||  | || ||| |||||||||||||||| |||| ||| |||||
Sbjct: 32851643 gccgagcgcgactccctcctctaccgctcctacatcgccatcggctcccaccag 32851696
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>gb|AY530950.1| Zea mays putative zinc finger protein (Z438D03.1), unknown (Z438D03.5),
             epsilon-COP (Z438D03.6), putative kinase (Z438D03.7),
             unknown (Z438D03.25), and C1-B73 (Z438D03.27) genes,
             complete cds
          Length = 185988

 Score =  200 bits (101), Expect = 4e-48
 Identities = 149/165 (90%)
 Strand = Plus / Plus

                                                                         
Query: 120   gcgatggccacccccgacctcctcttcaacctgcgcaacctcttctacctcggcgcctac 179
             ||||||||| |||||||||| |||||||| ||||| |||||||||||||| |||||||||
Sbjct: 39633 gcgatggcctcccccgacctgctcttcaatctgcggaacctcttctacctgggcgcctac 39692

                                                                         
Query: 180   cagtccgccatcaacaacagcgacgtcccgggcctcgacgccgacgccgcggccgagcgc 239
             ||| | ||||| ||||||| |||| ||| |||||||||||||| |||||| || ||||||
Sbjct: 39693 caggcagccattaacaacatcgacatcctgggcctcgacgccgccgccgccgctgagcgc 39752

                                                          
Query: 240   gacgtcatcgtcttccgctcctacatcgccctcggatcctaccag 284
             |||| |||||||||||||||||||||||||||||| |||||||||
Sbjct: 39753 gacgccatcgtcttccgctcctacatcgccctcggctcctaccag 39797



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 45/49 (91%)
 Strand = Plus / Plus

                                                              
Query: 321   tcgctgcaggccgtcaagctgctcgcgctctacctcaccggagacaagg 369
             |||||||||||||| ||||||||||| || |||||||| ||||||||||
Sbjct: 39837 tcgctgcaggccgtgaagctgctcgctctgtacctcactggagacaagg 39885
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>dbj|AB042113.1| Glycine max cope1 mRNA for epsilon1-COP, complete cds
          Length = 1269

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 63/71 (88%)
 Strand = Plus / Plus

                                                                       
Query: 135 gacctcctcttcaacctgcgcaacctcttctacctcggcgcctaccagtccgccatcaac 194
           |||| |||||||||||| ||||||  ||||||||||||||| |||||  |||||||||||
Sbjct: 71  gaccacctcttcaacctccgcaacaacttctacctcggcgcttaccaagccgccatcaac 130

                      
Query: 195 aacagcgacgt 205
           | |||||||||
Sbjct: 131 agcagcgacgt 141
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>ref|XM_474096.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 894

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 63/73 (86%)
 Strand = Plus / Plus

                                                                       
Query: 231 gccgagcgcgacgtcatcgtcttccgctcctacatcgccctcggatcctaccagctggtg 290
           ||||||||||||  | || ||| |||||||||||||||| |||| ||| |||||||||||
Sbjct: 130 gccgagcgcgactccctcctctaccgctcctacatcgccatcggctcccaccagctggtg 189

                        
Query: 291 atcagcgagatcg 303
           |||  ||||||||
Sbjct: 190 atcgacgagatcg 202
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>ref|XM_465338.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 318

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 65/78 (83%)
 Strand = Plus / Plus

                                                                       
Query: 190 tcaacaacagcgacgtcccgggcctcgacgccgacgccgcggccgagcgcgacgtcatcg 249
           ||||||||||||| ||||| | ||||  ||||| |||||| | | |||||| || |||||
Sbjct: 74  tcaacaacagcgatgtccctgacctcaccgccgccgccgccgacaagcgcggcgccatcg 133

                             
Query: 250 tcttccgctcctacatcg 267
           |||||| ||||| |||||
Sbjct: 134 tcttccactcctgcatcg 151
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>emb|AJ866984.1| Medicago truncatula mRNA for coatomer epsilon subunit (cope1 gene)
          Length = 870

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 53/62 (85%)
 Strand = Plus / Plus

                                                                       
Query: 141 ctcttcaacctgcgcaacctcttctacctcggcgcctaccagtccgccatcaacaacagc 200
           ||||||||||| ||||||  ||||||||||||||| |||||  | || ||||||| ||||
Sbjct: 19  ctcttcaacctccgcaacaacttctacctcggcgcataccaagctgcaatcaacagcagc 78

             
Query: 201 ga 202
           ||
Sbjct: 79  ga 80
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 65/78 (83%)
 Strand = Plus / Minus

                                                                            
Query: 190      tcaacaacagcgacgtcccgggcctcgacgccgacgccgcggccgagcgcgacgtcatcg 249
                ||||||||||||| ||||| | ||||  ||||| |||||| | | |||||| || |||||
Sbjct: 13531105 tcaacaacagcgatgtccctgacctcaccgccgccgccgccgacaagcgcggcgccatcg 13531046

                                  
Query: 250      tcttccgctcctacatcg 267
                |||||| ||||| |||||
Sbjct: 13531045 tcttccactcctgcatcg 13531028



 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 215      cgacgccgacgccgcggccg 234
                ||||||||||||||||||||
Sbjct: 27678188 cgacgccgacgccgcggccg 27678207



 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 215      cgacgccgacgccgcggccg 234
                ||||||||||||||||||||
Sbjct: 21628607 cgacgccgacgccgcggccg 21628626
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>dbj|AP005865.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBb0037J12
          Length = 118553

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 65/78 (83%)
 Strand = Plus / Minus

                                                                         
Query: 190   tcaacaacagcgacgtcccgggcctcgacgccgacgccgcggccgagcgcgacgtcatcg 249
             ||||||||||||| ||||| | ||||  ||||| |||||| | | |||||| || |||||
Sbjct: 46410 tcaacaacagcgatgtccctgacctcaccgccgccgccgccgacaagcgcggcgccatcg 46351

                               
Query: 250   tcttccgctcctacatcg 267
             |||||| ||||| |||||
Sbjct: 46350 tcttccactcctgcatcg 46333
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>dbj|AP004177.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1116_E03
          Length = 126845

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 65/78 (83%)
 Strand = Plus / Minus

                                                                          
Query: 190    tcaacaacagcgacgtcccgggcctcgacgccgacgccgcggccgagcgcgacgtcatcg 249
              ||||||||||||| ||||| | ||||  ||||| |||||| | | |||||| || |||||
Sbjct: 117034 tcaacaacagcgatgtccctgacctcaccgccgccgccgccgacaagcgcggcgccatcg 116975

                                
Query: 250    tcttccgctcctacatcg 267
              |||||| ||||| |||||
Sbjct: 116974 tcttccactcctgcatcg 116957
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>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence
          Length = 3809201

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                       
Query: 218     cgccgacgccgcggccgagcgcga 241
               ||||||||||||||||||||||||
Sbjct: 2065829 cgccgacgccgcggccgagcgcga 2065806
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>ref|NM_129037.3| Arabidopsis thaliana protein transporter AT2G34840 mRNA, complete
           cds
          Length = 1161

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 49/58 (84%)
 Strand = Plus / Plus

                                                                     
Query: 247 tcgtcttccgctcctacatcgccctcggatcctaccagctggtgatcagcgagatcga 304
           |||||||||| || ||||||||||||||   ||| ||||| || ||||| ||||||||
Sbjct: 228 tcgtcttccgatcttacatcgccctcggtagctatcagcttgttatcagtgagatcga 285
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>gb|AY142051.1| Arabidopsis thaliana At2g34840/F19I3.7 mRNA, complete cds
          Length = 882

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 49/58 (84%)
 Strand = Plus / Plus

                                                                     
Query: 247 tcgtcttccgctcctacatcgccctcggatcctaccagctggtgatcagcgagatcga 304
           |||||||||| || ||||||||||||||   ||| ||||| || ||||| ||||||||
Sbjct: 137 tcgtcttccgatcttacatcgccctcggtagctatcagcttgttatcagtgagatcga 194
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>emb|AJ720775.1| Gallus gallus mRNA for hypothetical protein, clone 25f12
          Length = 1286

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                             
Query: 161 cttctacctcggcgcctaccagtccgccatcaac 194
           ||||||| |||| ||||||||| |||||||||||
Sbjct: 118 cttctacatcggggcctaccaggccgccatcaac 151
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>ref|NM_001006339.1| Gallus gallus coatomer protein complex, subunit epsilon (COPE),
           mRNA
          Length = 1286

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                             
Query: 161 cttctacctcggcgcctaccagtccgccatcaac 194
           ||||||| |||| ||||||||| |||||||||||
Sbjct: 118 cttctacatcggggcctaccaggccgccatcaac 151
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>gb|AY075627.1| Arabidopsis thaliana At2g34840/F19I3.7 mRNA, complete cds
          Length = 1129

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 49/58 (84%)
 Strand = Plus / Plus

                                                                     
Query: 247 tcgtcttccgctcctacatcgccctcggatcctaccagctggtgatcagcgagatcga 304
           |||||||||| || ||||||||||||||   ||| ||||| || ||||| ||||||||
Sbjct: 196 tcgtcttccgatcttacatcgccctcggtagctatcagcttgttatcagtgagatcga 253
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 306      tcgtcggcggcgacgtcgctgc 327
                ||||||||||||||||||||||
Sbjct: 28932343 tcgtcggcggcgacgtcgctgc 28932364
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>gb|AC106742.3| Homo sapiens chromosome 16 clone RP11-1136G4, complete sequence
          Length = 145009

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 393   gaatggttgagtgattcagcca 414
             ||||||||||||||||||||||
Sbjct: 40373 gaatggttgagtgattcagcca 40352
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                         
Query: 209     gggcctcgacgccgacgccgcggccg 234
               ||||||||||||||||| ||||||||
Sbjct: 8902964 gggcctcgacgccgacggcgcggccg 8902989



 Score = 44.1 bits (22), Expect = 0.51
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 215     cgacgccgacgccgcggccgagcgcg 240
               |||||||| |||||||||||||||||
Sbjct: 4937907 cgacgccgtcgccgcggccgagcgcg 4937882
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>dbj|AP005167.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBa0060O17
          Length = 180015

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 306   tcgtcggcggcgacgtcgctgc 327
             ||||||||||||||||||||||
Sbjct: 49880 tcgtcggcggcgacgtcgctgc 49901
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>dbj|AK068606.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013157G23, full
           insert sequence
          Length = 1650

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 306 tcgtcggcggcgacgtcgctgc 327
           ||||||||||||||||||||||
Sbjct: 120 tcgtcggcggcgacgtcgctgc 141
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>emb|AL732331.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0413E07, complete
             sequence
          Length = 76546

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 46/54 (85%)
 Strand = Plus / Plus

                                                                   
Query: 231   gccgagcgcgacgtcatcgtcttccgctcctacatcgccctcggatcctaccag 284
             ||||||||||||  | || ||| |||||||||||||||| |||| ||| |||||
Sbjct: 46933 gccgagcgcgactccctcctctaccgctcctacatcgccatcggctcccaccag 46986
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>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence
          Length = 2914771

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 287    ggtgatcagcgagatcgactcg 308
              ||||||||||||||||||||||
Sbjct: 497344 ggtgatcagcgagatcgactcg 497323
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>emb|AL606454.3|OSJN00009 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0033G05,
              complete sequence
          Length = 142556

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 46/54 (85%)
 Strand = Plus / Plus

                                                                    
Query: 231    gccgagcgcgacgtcatcgtcttccgctcctacatcgccctcggatcctaccag 284
              ||||||||||||  | || ||| |||||||||||||||| |||| ||| |||||
Sbjct: 113930 gccgagcgcgactccctcctctaccgctcctacatcgccatcggctcccaccag 113983
to top
>gb|DQ182118.1| Uncultured bacterium clone SRP17 putative nitrite reductase (nirS)
           gene, partial cds
          Length = 410

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 290 gatcagcgagatcgactcgtc 310
           |||||||||||||||||||||
Sbjct: 309 gatcagcgagatcgactcgtc 289
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>gb|AC152945.1| Mus musculus 10 BAC RP23-257F18 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 175982

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 436    gattgattgatggaattatat 456
              |||||||||||||||||||||
Sbjct: 123937 gattgattgatggaattatat 123957
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>gb|AC159473.7| Mus musculus 10 BAC RP23-215E23 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 190387

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 436    gattgattgatggaattatat 456
              |||||||||||||||||||||
Sbjct: 154637 gattgattgatggaattatat 154617
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>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome
          Length = 3147090

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 149     cctgcgcaacctcttctacct 169
               |||||||||||||||||||||
Sbjct: 2146009 cctgcgcaacctcttctacct 2145989
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>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence
          Length = 5888780

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 223     acgccgcggccgagcgcgacg 243
               |||||||||||||||||||||
Sbjct: 1816506 acgccgcggccgagcgcgacg 1816486
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>ref|XM_466314.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2316

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 215  cgacgccgacgccgcggccg 234
            ||||||||||||||||||||
Sbjct: 1494 cgacgccgacgccgcggccg 1475
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>ref|NM_193877.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1557

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 310 cggcggcgacgtcgctgcag 329
           ||||||||||||||||||||
Sbjct: 944 cggcggcgacgtcgctgcag 963
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>gb|AY661566.1| Saccharopolyspora erythraea polyketide synthase gene cluster, complete
             sequence
          Length = 32299

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 215   cgacgccgacgccgcggccg 234
             ||||||||||||||||||||
Sbjct: 20872 cgacgccgacgccgcggccg 20891
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>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome
          Length = 2584158

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 224     cgccgcggccgagcgcgacg 243
               ||||||||||||||||||||
Sbjct: 2366287 cgccgcggccgagcgcgacg 2366306
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>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence
          Length = 3181762

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 328     aggccgtcaagctgctcgcgctct 351
               |||||||| |||||||||||||||
Sbjct: 1705743 aggccgtcgagctgctcgcgctct 1705766
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>gb|BT014249.1| Lycopersicon esculentum clone 133451F, mRNA sequence
          Length = 1320

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 92/116 (79%)
 Strand = Plus / Plus

                                                                       
Query: 441 attgatggaattatatttatgcatgagcaagactacaacgaggctctcaagcacacacat 500
           |||| ||| ||| |||| ||||||||||| || ||||| || ||| | ||||| ||| ||
Sbjct: 417 attgctgggattgtattcatgcatgagcaggattacaatgaagctttgaagcatacaaat 476

                                                                   
Query: 501 actgggggaactctggacctgcatgcactgaacgtccagatcttccttaagatgca 556
            |||| || ||  ||||  |||||||  |||| |||||||| ||| ||||||||||
Sbjct: 477 gctggagggacgatggaattgcatgctttgaatgtccagatattcattaagatgca 532
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>ref|XM_849541.1| PREDICTED: Canis familiaris similar to TEA domain family member 4
           isoform 1 (LOC611826), mRNA
          Length = 1669

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 86  acccaccccgtcgccggcagcgccccca 113
           |||||||||||||||  |||||||||||
Sbjct: 939 acccaccccgtcgccctcagcgccccca 966
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>ref|XM_785039.1| PREDICTED: Strongylocentrotus purpuratus similar to CG1732-PA,
           isoform A (LOC585204), mRNA
          Length = 1974

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 39  tcttctttctcgagatctcc 58
           ||||||||||||||||||||
Sbjct: 272 tcttctttctcgagatctcc 291
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>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence
          Length = 3173005

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 328     aggccgtcaagctgctcgcgctct 351
               |||||||| |||||||||||||||
Sbjct: 3040602 aggccgtcgagctgctcgcgctct 3040625
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>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 214     tcgacgccgacgccgcggcc 233
               ||||||||||||||||||||
Sbjct: 4761562 tcgacgccgacgccgcggcc 4761581
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>gb|AC004238.3| Arabidopsis thaliana chromosome 2 clone F19I3 map ve016, complete
             sequence
          Length = 108484

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 247   tcgtcttccgctcctacatcgccctcgg 274
             |||||||||| || ||||||||||||||
Sbjct: 31416 tcgtcttccgatcttacatcgccctcgg 31443
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>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome
          Length = 3561584

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 218     cgccgacgccgcggccgagc 237
               ||||||||||||||||||||
Sbjct: 3536840 cgccgacgccgcggccgagc 3536821
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>gb|AE016818.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome V,
              complete sequence
          Length = 1519138

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 237    cgcgacgtcatcgtcttccg 256
              ||||||||||||||||||||
Sbjct: 897385 cgcgacgtcatcgtcttccg 897404
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>gb|AC006936.17|AC006936 Drosophila melanogaster, chromosome 3R, region 93E4-93E7, BAC clone
             BACR48I01, complete sequence
          Length = 170535

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 305   ctcgtcggcggcgacgtcgctgca 328
             ||||||| ||||||||||||||||
Sbjct: 27862 ctcgtcgacggcgacgtcgctgca 27839
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>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence
          Length = 2325379

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 328     aggccgtcaagctgctcgcgctct 351
               |||||||| |||||||||||||||
Sbjct: 2189235 aggccgtcgagctgctcgcgctct 2189258
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>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome
          Length = 2909809

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 218     cgccgacgccgcggccgagcgcga 241
               |||||||| |||||||||||||||
Sbjct: 2602883 cgccgacgtcgcggccgagcgcga 2602906
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 310      cggcggcgacgtcgctgcag 329
                ||||||||||||||||||||
Sbjct: 15564591 cggcggcgacgtcgctgcag 15564572
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>emb|BX324215.14| Zebrafish DNA sequence from clone DKEY-42L16 in linkage group 22,
              complete sequence
          Length = 207877

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 282    cagctggtgatcagcgagat 301
              ||||||||||||||||||||
Sbjct: 108644 cagctggtgatcagcgagat 108663
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>gb|AC016132.4|AC016132 Drosophila melanogaster, chromosome 3R, region 93D-93D, BAC clone
              BACR34E13, complete sequence
          Length = 167475

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 305    ctcgtcggcggcgacgtcgctgca 328
              ||||||| ||||||||||||||||
Sbjct: 145027 ctcgtcgacggcgacgtcgctgca 145004
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>dbj|AB186127.1| Oryza sativa (japonica cultivar-group) mRNA for NPH3, complete cds
          Length = 2885

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 215  cgacgccgacgccgcggccg 234
            ||||||||||||||||||||
Sbjct: 1888 cgacgccgacgccgcggccg 1869
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>gb|AC105186.14| Homo sapiens chromosome 8, clone CTD-2323A1, complete sequence
          Length = 114669

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 535   tccagatcttccttaagatgcacc 558
             ||||||||||||||||| ||||||
Sbjct: 78448 tccagatcttccttaagctgcacc 78471
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 205     tcccgggcctcgacgccgacgccgcggc 232
               ||||||| |||| |||||||||||||||
Sbjct: 3172851 tcccggggctcggcgccgacgccgcggc 3172878
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>dbj|AP006068.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0020D05
          Length = 158760

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 215    cgacgccgacgccgcggccg 234
              ||||||||||||||||||||
Sbjct: 117557 cgacgccgacgccgcggccg 117576
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>dbj|AP006060.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0135D07
          Length = 170587

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 215    cgacgccgacgccgcggccg 234
              ||||||||||||||||||||
Sbjct: 157857 cgacgccgacgccgcggccg 157876
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 168     ctcggcgcctaccagtccgc 187
               ||||||||||||||||||||
Sbjct: 1903503 ctcggcgcctaccagtccgc 1903522
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>dbj|AP003204.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1111C09
          Length = 156393

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 310    cggcggcgacgtcgctgcag 329
              ||||||||||||||||||||
Sbjct: 122100 cggcggcgacgtcgctgcag 122081
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>dbj|AP002968.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
            clone:P0416G11
          Length = 138858

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 310  cggcggcgacgtcgctgcag 329
            ||||||||||||||||||||
Sbjct: 2488 cggcggcgacgtcgctgcag 2469
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>dbj|AP005775.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBb0005A04
          Length = 140723

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 215   cgacgccgacgccgcggccg 234
             ||||||||||||||||||||
Sbjct: 64054 cgacgccgacgccgcggccg 64073
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>dbj|AP006069.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0025F02
          Length = 156545

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 215   cgacgccgacgccgcggccg 234
             ||||||||||||||||||||
Sbjct: 10004 cgacgccgacgccgcggccg 10023
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>emb|X62569.1|SEERYABS S.erythraea eryA gene for 6-deoxyerythronolyde B synthase II & III
          Length = 20444

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 215  cgacgccgacgccgcggccg 234
            ||||||||||||||||||||
Sbjct: 8838 cgacgccgacgccgcggccg 8857
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>dbj|AK107582.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-130-E05, full
            insert sequence
          Length = 1801

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 215  cgacgccgacgccgcggccg 234
            ||||||||||||||||||||
Sbjct: 995  cgacgccgacgccgcggccg 1014
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>ref|NM_210351.1| Eremothecium gossypii AER138Cp (AER138C), mRNA
          Length = 1629

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 237  cgcgacgtcatcgtcttccg 256
            ||||||||||||||||||||
Sbjct: 1527 cgcgacgtcatcgtcttccg 1508
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>dbj|AK068106.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013132B11, full
           insert sequence
          Length = 1010

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 215 cgacgccgacgccgcggccg 234
           ||||||||||||||||||||
Sbjct: 423 cgacgccgacgccgcggccg 404
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>emb|AL831726.11| Zebrafish DNA sequence from clone DKEY-49N23 in linkage group 22,
              complete sequence
          Length = 245697

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 282    cagctggtgatcagcgagat 301
              ||||||||||||||||||||
Sbjct: 226486 cagctggtgatcagcgagat 226505
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>gb|AE003735.2| Drosophila melanogaster chromosome 3R, section 73 of 118 of the
             complete sequence
          Length = 255463

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 305   ctcgtcggcggcgacgtcgctgca 328
             ||||||| ||||||||||||||||
Sbjct: 29699 ctcgtcgacggcgacgtcgctgca 29676
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>dbj|AB088224.1| Streptomyces rochei plasmid pSLA2-L DNA, complete sequence
          Length = 210614

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 215   cgacgccgacgccgcggccg 234
             ||||||||||||||||||||
Sbjct: 44845 cgacgccgacgccgcggccg 44826
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>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome
          Length = 3551823

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 215     cgacgccgacgccgcggccg 234
               ||||||||||||||||||||
Sbjct: 2727094 cgacgccgacgccgcggccg 2727113
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>gb|M63677.1|SERERYAB S.erythraea second and third ORF's of eryA gene, complete cds
          Length = 20235

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 215  cgacgccgacgccgcggccg 234
            ||||||||||||||||||||
Sbjct: 8811 cgacgccgacgccgcggccg 8830
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>dbj|AB042114.1| Glycine max cope2 mRNA for epsilon2-COP, partial cds
          Length = 1223

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 59/72 (81%)
 Strand = Plus / Plus

                                                                       
Query: 135 gacctcctcttcaacctgcgcaacctcttctacctcggcgcctaccagtccgccatcaac 194
           |||| ||| |||||||| ||||||  ||| || ||||| || |||||  |||||||||||
Sbjct: 7   gaccacctgttcaacctccgcaacaacttgtatctcggggcgtaccaagccgccatcaac 66

                       
Query: 195 aacagcgacgtc 206
           | | ||||||||
Sbjct: 67  agcggcgacgtc 78


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,016,264
Number of Sequences: 3902068
Number of extensions: 5016264
Number of successful extensions: 93608
Number of sequences better than 10.0: 76
Number of HSP's better than 10.0 without gapping: 79
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 90070
Number of HSP's gapped (non-prelim): 3533
length of query: 581
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 558
effective length of database: 17,143,297,704
effective search space: 9565960118832
effective search space used: 9565960118832
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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