Clone Name
bart45g10
Clone Library Name
barley_pub
No.
Definition
Score (bits)
E Value
1 gb|AY011124.1| Dactylis glomerata 26S proteasome RPT6a subunit (...
224
8e-56
2 ref|XM_507461.1| PREDICTED Oryza sativa (japonica cultivar-group...
100
3e-18
3 ref|XM_464561.1| Oryza sativa (japonica cultivar-group), mRNA
100
3e-18
4 ref|XM_506757.2| PREDICTED Oryza sativa (japonica cultivar-group...
100
3e-18
5 dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D...
100
3e-18
6 dbj|AP005915.3| Oryza sativa (japonica cultivar-group) genomic D...
100
3e-18
7 dbj|AP005008.3| Oryza sativa (japonica cultivar-group) genomic D...
100
3e-18
8 dbj|AK106217.1| Oryza sativa (japonica cultivar-group) cDNA clon...
100
3e-18
9 dbj|AK102286.1| Oryza sativa (japonica cultivar-group) cDNA clon...
100
3e-18
10 dbj|AK061762.1| Oryza sativa (japonica cultivar-group) cDNA clon...
100
3e-18
11 dbj|AB052887.1| Oryza sativa mRNA for 26S proteasome ATPase subu...
100
3e-18
12 dbj|AB033537.1| Oryza sativa (japonica cultivar-group) OsRPT6 mR...
100
3e-18
13 gb|BT009143.1| Triticum aestivum clone wl1n.pk0053.g3:fis, full ...
94
2e-16
14 gb|AY103724.1| Zea mays PCO078380 mRNA sequence
94
2e-16
15 dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D...
48
0.010
16 dbj|AP003612.2| Oryza sativa (japonica cultivar-group) genomic D...
48
0.010
17 dbj|AP003623.3| Oryza sativa (japonica cultivar-group) genomic D...
48
0.010
18 dbj|AK065619.1| Oryza sativa (japonica cultivar-group) cDNA clon...
48
0.010
19 ref|XM_425834.1| PREDICTED: Gallus gallus similar to for proteas...
44
0.15
20 emb|CR386298.1| Gallus gallus finished cDNA, clone ChEST117k22
44
0.15
21 emb|BX950722.2| Gallus gallus finished cDNA, clone ChEST201g21
44
0.15
22 ref|XM_850011.1| PREDICTED: Canis familiaris similar to RING fin...
42
0.61
23 gb|AC005186.3| Homo sapiens 12 PAC RP5-916L7 (Roswell Park Cance...
42
0.61
24 dbj|AP003564.2| Oryza sativa (japonica cultivar-group) genomic D...
42
0.61
25 dbj|AP003577.3| Oryza sativa (japonica cultivar-group) genomic D...
42
0.61
26 dbj|AK071942.1| Oryza sativa (japonica cultivar-group) cDNA clon...
42
0.61
27 gb|AC116825.23| Mus musculus chromosome 8, clone RP24-367H14, co...
40
2.4
28 gb|AC116758.11| Mus musculus chromosome 8, clone RP23-383A10, co...
40
2.4
29 gb|AC008255.9| Drosophila melanogaster clone BACR48D17, complete...
40
2.4
30 emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete ...
40
2.4
31 ref|XM_940063.1| PREDICTED: Homo sapiens ankyrin repeat domain 2...
40
2.4
32 ref|XM_114000.5| PREDICTED: Homo sapiens ankyrin repeat domain 2...
40
2.4
33 emb|AL116566.1|CNS01DA6 Botrytis cinerea strain T4 cDNA library
40
2.4
34 dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D...
40
2.4
35 gb|AC018488.7|AC018488 Drosophila melanogaster, chromosome X, re...
40
2.4
36 dbj|AK111154.1| Oryza sativa (japonica cultivar-group) cDNA clon...
40
2.4
37 gb|AY104042.1| Zea mays PCO094376 mRNA sequence
40
2.4
38 gb|AC006930.1|AC006930 Homo sapiens chromosome 19, cosmid R33243...
40
2.4
39 gb|AE003498.5| Drosophila melanogaster chromosome X, section 50 ...
40
2.4
40 gb|DQ065771.1| Polyangium cellulosum hypothetical protein gene, ...
40
2.4
41 gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome...
40
2.4
42 emb|AL731882.2|CNS08C8M Oryza sativa chromosome 12, . BAC OSJNBb...
40
2.4
43 ref|NM_000262.1| Homo sapiens N-acetylgalactosaminidase, alpha- ...
38
9.5
44 gb|AC132489.2| Oryza sativa (japonica cultivar-group) chromosome...
38
9.5
45 ref|XM_322902.1| Neurospora crassa OR74A predicted protein (NCU0...
38
9.5
46 ref|XM_612423.2| PREDICTED: Bos taurus similar to astrotactin 2 ...
38
9.5
47 ref|XM_956235.1| Neurospora crassa OR74A hypothetical protein (N...
38
9.5
48 ref|XM_676825.1| Aspergillus nidulans FGSC A4 hypothetical prote...
38
9.5
49 ref|XM_676154.1| Aspergillus nidulans FGSC A4 hypothetical prote...
38
9.5
50 ref|XM_676010.1| Aspergillus nidulans FGSC A4 hypothetical prote...
38
9.5
51 ref|XM_659606.1| Aspergillus nidulans FGSC A4 hypothetical prote...
38
9.5
52 ref|XM_656492.1| Aspergillus nidulans FGSC A4 hypothetical prote...
38
9.5
53 ref|XM_655855.1| Aspergillus nidulans FGSC A4 hypothetical prote...
38
9.5
54 ref|XM_655308.1| Aspergillus nidulans FGSC A4 hypothetical prote...
38
9.5
55 ref|XM_655223.1| Aspergillus nidulans FGSC A4 hypothetical prote...
38
9.5
56 ref|XM_655173.1| Aspergillus nidulans FGSC A4 hypothetical prote...
38
9.5
57 ref|XM_653133.1| Aspergillus nidulans FGSC A4 hypothetical prote...
38
9.5
58 ref|XM_652880.1| Aspergillus nidulans FGSC A4 hypothetical prote...
38
9.5
59 ref|NM_000945.3| Homo sapiens protein phosphatase 3 (formerly 2B...
38
9.5
60 gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome
38
9.5
61 gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
38
9.5
62 ref|XM_543239.2| PREDICTED: Canis familiaris similar to NK2 tran...
38
9.5
63 gb|AC121914.3| Mus musculus BAC clone RP24-186A10 from chromosom...
38
9.5
64 gb|DQ144434.1| Ascocalyx abietina clone pCAT-700-B1-a microsatel...
38
9.5
65 gb|DQ144433.1| Ascocalyx abietina clone pCAT-700-AU58-j microsat...
38
9.5
66 emb|X52980.1|SCCSA1 Streptomyces coelicolor hrdA gene for princi...
38
9.5
67 gb|AC027038.12| Oryza sativa chromosome 10 BAC OSJNBa0071K18 gen...
38
9.5
68 emb|AL939112.1|SCO939112 Streptomyces coelicolor A3(2) complete ...
38
9.5
69 emb|AL670005.1|NCB11H24 Neurospora crassa DNA linkage group V BA...
38
9.5
70 gb|AC009166.4| Homo sapiens chromosome 16 clone RP11-80B1, compl...
38
9.5
71 gb|AC092802.2| Homo sapiens chromosome 1 clone RP11-57H12, compl...
38
9.5
72 gb|AE008686.1|AE008686 Mus musculus T-cell receptor alpha/delta ...
38
9.5
73 gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hilde...
38
9.5
74 dbj|AK030929.1| Mus musculus adult male thymus cDNA, RIKEN full-...
38
9.5
75 ref|NM_001024505.1| Bos taurus engulfment and cell motility 1 is...
38
9.5
76 dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D...
38
9.5
77 dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D...
38
9.5
78 dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D...
38
9.5
79 gb|AC007498.7| Homo sapiens chromosome 16 clone RP11-424K7, comp...
38
9.5
80 gb|AC017083.7| Homo sapiens BAC clone RP11-474G23 from 2, comple...
38
9.5
81 gb|AC152829.2| Ornithorhynchus anatinus BAC clone OABb-466A1 fro...
38
9.5
82 gb|AC107225.2| Oryza sativa (japonica cultivar-group) chromosome...
38
9.5
83 dbj|AB008267.1| Arabidopsis thaliana genomic DNA, chromosome 5, ...
38
9.5
84 dbj|AK107307.1| Oryza sativa (japonica cultivar-group) cDNA clon...
38
9.5
85 emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,comp...
38
9.5
86 emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome comple...
38
9.5
87 gb|AY108343.1| Zea mays PCO065510 mRNA sequence
38
9.5
88 gb|BT020663.1| Bos taurus engulfment and cell motility 1 (ced-12...
38
9.5
89 gb|BT020638.1| Bos taurus engulfment and cell motility 1 (ced-12...
38
9.5
90 emb|X82289.1|ANAPSA A.nidulans apsA gene
38
9.5
91 emb|Y13918.1|PABY13918 Pseudomonas aeruginosa phage phi CTX DNA,...
38
9.5
92 dbj|AP001786.4| Homo sapiens genomic DNA, chromosome 11q, clone:...
38
9.5
93 gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome
38
9.5
94 gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome...
38
9.5
95 gb|BC027913.1| Homo sapiens protein phosphatase 3 (formerly 2B),...
38
9.5
96 gb|M59199.1|HUMAGAL Human alpha-N-acetylgalactosaminidase (NAGA)...
38
9.5
97 gb|M62783.1|HUMAGALNA Human alpha-N-acetylgalactosaminidase mRNA...
38
9.5
98 gb|M16638.1|CHKTBBPHS Chicken beta-2 tubulin gene promoter regio...
38
9.5
99 gb|M64239.1|MUSTCRA Mouse T-cell receptor alpha/delta chain locus
38
9.5
100 dbj|AB008550.1| Pseudomonas aeruginosa phage phi CTX, complete g...
38
9.5
>gb| AY011124.1 | Dactylis glomerata 26S proteasome RPT6a subunit (DGRPT6a) mRNA,
complete cds
Length = 1553
Score = 224 bits (113), Expect = 8e-56
Identities = 131/137 (95%)
Strand = Plus / Plus
Query: 56 ccggggatggcgacggtggcgatggacatctcgaagcccccgccggccgcgtccggcgac 115
|||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 119 ccggagatggcgacggtggcgatggacatctcgaagcccccgccggccgcggccggcgac 178
Query: 116 gagtcggccaagggcgcgcgtggcggaggggaggggctgcggcagtactacctgcagcac 175
|| || |||||||||||||| | |||||||||||||||||||||||||||||||||||||
Sbjct: 179 gattccgccaagggcgcgcgcgccggaggggaggggctgcggcagtactacctgcagcac 238
Query: 176 atccacgacctgcagct 192
|||||||||||||||||
Sbjct: 239 atccacgacctgcagct 255
>ref| XM_507461.1 | PREDICTED Oryza sativa (japonica cultivar-group), P0544H11.38 mRNA
Length = 1653
Score = 99.6 bits (50), Expect = 3e-18
Identities = 50/50 (100%)
Strand = Plus / Plus
Query: 143 ggggaggggctgcggcagtactacctgcagcacatccacgacctgcagct 192
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 156 ggggaggggctgcggcagtactacctgcagcacatccacgacctgcagct 205
Score = 60.0 bits (30), Expect = 3e-06
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 61 gatggcgacggtggcgatggacatctcgaagcccccgccggccgcgtccggcgacgag 118
|||||| |||||||||||||||||||| |||||||| || || ||| ||||||||||
Sbjct: 56 gatggccacggtggcgatggacatctccaagccccctcccgcggcgggcggcgacgag 113
>ref| XM_464561.1 | Oryza sativa (japonica cultivar-group), mRNA
Length = 1653
Score = 99.6 bits (50), Expect = 3e-18
Identities = 50/50 (100%)
Strand = Plus / Plus
Query: 143 ggggaggggctgcggcagtactacctgcagcacatccacgacctgcagct 192
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 156 ggggaggggctgcggcagtactacctgcagcacatccacgacctgcagct 205
Score = 60.0 bits (30), Expect = 3e-06
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 61 gatggcgacggtggcgatggacatctcgaagcccccgccggccgcgtccggcgacgag 118
|||||| |||||||||||||||||||| |||||||| || || ||| ||||||||||
Sbjct: 56 gatggccacggtggcgatggacatctccaagccccctcccgcggcgggcggcgacgag 113
>ref| XM_506757.2 | PREDICTED Oryza sativa (japonica cultivar-group), P0544H11.38 mRNA
Length = 1771
Score = 99.6 bits (50), Expect = 3e-18
Identities = 50/50 (100%)
Strand = Plus / Plus
Query: 143 ggggaggggctgcggcagtactacctgcagcacatccacgacctgcagct 192
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 ggggaggggctgcggcagtactacctgcagcacatccacgacctgcagct 305
Score = 60.0 bits (30), Expect = 3e-06
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 61 gatggcgacggtggcgatggacatctcgaagcccccgccggccgcgtccggcgacgag 118
|||||| |||||||||||||||||||| |||||||| || || ||| ||||||||||
Sbjct: 156 gatggccacggtggcgatggacatctccaagccccctcccgcggcgggcggcgacgag 213
>dbj| AP008208.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
sequence
Length = 35954743
Score = 99.6 bits (50), Expect = 3e-18
Identities = 50/50 (100%)
Strand = Plus / Minus
Query: 143 ggggaggggctgcggcagtactacctgcagcacatccacgacctgcagct 192
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5923400 ggggaggggctgcggcagtactacctgcagcacatccacgacctgcagct 5923351
Score = 60.0 bits (30), Expect = 3e-06
Identities = 51/58 (87%)
Strand = Plus / Minus
Query: 61 gatggcgacggtggcgatggacatctcgaagcccccgccggccgcgtccggcgacgag 118
|||||| |||||||||||||||||||| |||||||| || || ||| ||||||||||
Sbjct: 5923500 gatggccacggtggcgatggacatctccaagccccctcccgcggcgggcggcgacgag 5923443
>dbj| AP005915.3 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
clone:OSJNBb0056C19
Length = 147739
Score = 99.6 bits (50), Expect = 3e-18
Identities = 50/50 (100%)
Strand = Plus / Minus
Query: 143 ggggaggggctgcggcagtactacctgcagcacatccacgacctgcagct 192
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 101621 ggggaggggctgcggcagtactacctgcagcacatccacgacctgcagct 101572
Score = 60.0 bits (30), Expect = 3e-06
Identities = 51/58 (87%)
Strand = Plus / Minus
Query: 61 gatggcgacggtggcgatggacatctcgaagcccccgccggccgcgtccggcgacgag 118
|||||| |||||||||||||||||||| |||||||| || || ||| ||||||||||
Sbjct: 101721 gatggccacggtggcgatggacatctccaagccccctcccgcggcgggcggcgacgag 101664
>dbj| AP005008.3 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
clone:P0544H11
Length = 178376
Score = 99.6 bits (50), Expect = 3e-18
Identities = 50/50 (100%)
Strand = Plus / Minus
Query: 143 ggggaggggctgcggcagtactacctgcagcacatccacgacctgcagct 192
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 153202 ggggaggggctgcggcagtactacctgcagcacatccacgacctgcagct 153153
Score = 60.0 bits (30), Expect = 3e-06
Identities = 51/58 (87%)
Strand = Plus / Minus
Query: 61 gatggcgacggtggcgatggacatctcgaagcccccgccggccgcgtccggcgacgag 118
|||||| |||||||||||||||||||| |||||||| || || ||| ||||||||||
Sbjct: 153302 gatggccacggtggcgatggacatctccaagccccctcccgcggcgggcggcgacgag 153245
>dbj| AK106217.1 | Oryza sativa (japonica cultivar-group) cDNA clone:001-208-H03, full
insert sequence
Length = 1653
Score = 99.6 bits (50), Expect = 3e-18
Identities = 50/50 (100%)
Strand = Plus / Plus
Query: 143 ggggaggggctgcggcagtactacctgcagcacatccacgacctgcagct 192
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 156 ggggaggggctgcggcagtactacctgcagcacatccacgacctgcagct 205
Score = 60.0 bits (30), Expect = 3e-06
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 61 gatggcgacggtggcgatggacatctcgaagcccccgccggccgcgtccggcgacgag 118
|||||| |||||||||||||||||||| |||||||| || || ||| ||||||||||
Sbjct: 56 gatggccacggtggcgatggacatctccaagccccctcccgcggcgggcggcgacgag 113
>dbj| AK102286.1 | Oryza sativa (japonica cultivar-group) cDNA clone:J033089I16, full
insert sequence
Length = 1772
Score = 99.6 bits (50), Expect = 3e-18
Identities = 50/50 (100%)
Strand = Plus / Plus
Query: 143 ggggaggggctgcggcagtactacctgcagcacatccacgacctgcagct 192
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 ggggaggggctgcggcagtactacctgcagcacatccacgacctgcagct 305
Score = 60.0 bits (30), Expect = 3e-06
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 61 gatggcgacggtggcgatggacatctcgaagcccccgccggccgcgtccggcgacgag 118
|||||| |||||||||||||||||||| |||||||| || || ||| ||||||||||
Sbjct: 156 gatggccacggtggcgatggacatctccaagccccctcccgcggcgggcggcgacgag 213
>dbj| AK061762.1 | Oryza sativa (japonica cultivar-group) cDNA clone:001-039-B03, full
insert sequence
Length = 1653
Score = 99.6 bits (50), Expect = 3e-18
Identities = 50/50 (100%)
Strand = Plus / Plus
Query: 143 ggggaggggctgcggcagtactacctgcagcacatccacgacctgcagct 192
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 156 ggggaggggctgcggcagtactacctgcagcacatccacgacctgcagct 205
Score = 60.0 bits (30), Expect = 3e-06
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 61 gatggcgacggtggcgatggacatctcgaagcccccgccggccgcgtccggcgacgag 118
|||||| |||||||||||||||||||| |||||||| || || ||| ||||||||||
Sbjct: 56 gatggccacggtggcgatggacatctccaagccccctcccgcggcgggcggcgacgag 113
>dbj| AB052887.1 | Oryza sativa mRNA for 26S proteasome ATPase subunit Rpt6, complete
cds
Length = 1516
Score = 99.6 bits (50), Expect = 3e-18
Identities = 50/50 (100%)
Strand = Plus / Plus
Query: 143 ggggaggggctgcggcagtactacctgcagcacatccacgacctgcagct 192
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 138 ggggaggggctgcggcagtactacctgcagcacatccacgacctgcagct 187
Score = 60.0 bits (30), Expect = 3e-06
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 61 gatggcgacggtggcgatggacatctcgaagcccccgccggccgcgtccggcgacgag 118
|||||| |||||||||||||||||||| |||||||| || || ||| ||||||||||
Sbjct: 38 gatggccacggtggcgatggacatctccaagccccctcccgcggcgggcggcgacgag 95
>dbj| AB033537.1 | Oryza sativa (japonica cultivar-group) OsRPT6 mRNA for 26S
proteasome regulatory particle triple-A ATPase subunit6,
complete cds
Length = 1625
Score = 99.6 bits (50), Expect = 3e-18
Identities = 50/50 (100%)
Strand = Plus / Plus
Query: 143 ggggaggggctgcggcagtactacctgcagcacatccacgacctgcagct 192
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 ggggaggggctgcggcagtactacctgcagcacatccacgacctgcagct 298
Score = 60.0 bits (30), Expect = 3e-06
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 61 gatggcgacggtggcgatggacatctcgaagcccccgccggccgcgtccggcgacgag 118
|||||| |||||||||||||||||||| |||||||| || || ||| ||||||||||
Sbjct: 149 gatggccacggtggcgatggacatctccaagccccctcccgcggcgggcggcgacgag 206
>gb| BT009143.1 | Triticum aestivum clone wl1n.pk0053.g3:fis, full insert mRNA
sequence
Length = 1450
Score = 93.7 bits (47), Expect = 2e-16
Identities = 47/47 (100%)
Strand = Plus / Plus
Query: 146 gaggggctgcggcagtactacctgcagcacatccacgacctgcagct 192
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 gaggggctgcggcagtactacctgcagcacatccacgacctgcagct 176
Score = 75.8 bits (38), Expect = 4e-11
Identities = 53/58 (91%)
Strand = Plus / Plus
Query: 61 gatggcgacggtggcgatggacatctcgaagcccccgccggccgcgtccggcgacgag 118
|||||||||||||||||||||||||||||||||| | || | |||||||||||||||
Sbjct: 33 gatggcgacggtggcgatggacatctcgaagcccactccagtggcgtccggcgacgag 90
>gb| AY103724.1 | Zea mays PCO078380 mRNA sequence
Length = 1655
Score = 93.7 bits (47), Expect = 2e-16
Identities = 59/63 (93%)
Strand = Plus / Plus
Query: 56 ccggggatggcgacggtggcgatggacatctcgaagcccccgccggccgcgtccggcgac 115
|||| |||||||||||||||||||||||||||||||||| ||||||| |||||||| |||
Sbjct: 28 ccggcgatggcgacggtggcgatggacatctcgaagcccacgccggcagcgtccggtgac 87
Query: 116 gag 118
|||
Sbjct: 88 gag 90
Score = 87.7 bits (44), Expect = 1e-14
Identities = 53/56 (94%)
Strand = Plus / Plus
Query: 137 ggcggaggggaggggctgcggcagtactacctgcagcacatccacgacctgcagct 192
||||| || ||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 121 ggcgggggcgaggggctgcggcagtactacctgcagcacatccatgacctgcagct 176
>dbj| AP008212.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
sequence
Length = 30731886
Score = 48.1 bits (24), Expect = 0.010
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 149 gggctgcggcagtactacctgcagcacatccacgacctgcagct 192
|||||||||| |||||||| | || ||||||||||||||||||
Sbjct: 23301680 gggctgcggccgtactaccagtcgcgcatccacgacctgcagct 23301723
Score = 42.1 bits (21), Expect = 0.61
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 61 gatggcgacggtggcgatgga 81
|||||||||||||||||||||
Sbjct: 16680202 gatggcgacggtggcgatgga 16680222
Score = 42.1 bits (21), Expect = 0.61
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 57 cggggatggcgacggtggcga 77
|||||||||||||||||||||
Sbjct: 1009092 cggggatggcgacggtggcga 1009112
>dbj| AP003612.2 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
clone:P0457B11
Length = 144015
Score = 48.1 bits (24), Expect = 0.010
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 149 gggctgcggcagtactacctgcagcacatccacgacctgcagct 192
|||||||||| |||||||| | || ||||||||||||||||||
Sbjct: 20653 gggctgcggccgtactaccagtcgcgcatccacgacctgcagct 20696
>dbj| AP003623.3 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
clone:P0642B07
Length = 139297
Score = 48.1 bits (24), Expect = 0.010
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 149 gggctgcggcagtactacctgcagcacatccacgacctgcagct 192
|||||||||| |||||||| | || ||||||||||||||||||
Sbjct: 136442 gggctgcggccgtactaccagtcgcgcatccacgacctgcagct 136485
>dbj| AK065619.1 | Oryza sativa (japonica cultivar-group) cDNA clone:J013034M24, full
insert sequence
Length = 1520
Score = 48.1 bits (24), Expect = 0.010
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 149 gggctgcggcagtactacctgcagcacatccacgacctgcagct 192
|||||||||| |||||||| | || ||||||||||||||||||
Sbjct: 155 gggctgcggccgtactaccagtcgcgcatccacgacctgcagct 198
>ref| XM_425834.1 | PREDICTED: Gallus gallus similar to for proteasomal ATPase (SUG1)
(LOC428274), mRNA
Length = 1236
Score = 44.1 bits (22), Expect = 0.15
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 148 ggggctgcggcagtactacctg 169
||||||||||||||||||||||
Sbjct: 69 ggggctgcggcagtactacctg 90
>emb| CR386298.1 | Gallus gallus finished cDNA, clone ChEST117k22
Length = 1317
Score = 44.1 bits (22), Expect = 0.15
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 148 ggggctgcggcagtactacctg 169
||||||||||||||||||||||
Sbjct: 102 ggggctgcggcagtactacctg 123
>emb| BX950722.2 | Gallus gallus finished cDNA, clone ChEST201g21
Length = 1367
Score = 44.1 bits (22), Expect = 0.15
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 148 ggggctgcggcagtactacctg 169
||||||||||||||||||||||
Sbjct: 103 ggggctgcggcagtactacctg 124
>ref| XM_850011.1 | PREDICTED: Canis familiaris similar to RING finger and KH domain
containing protein 1 (LOC612270), mRNA
Length = 1656
Score = 42.1 bits (21), Expect = 0.61
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 89 aagcccccgccggccgcgtcc 109
|||||||||||||||||||||
Sbjct: 1399 aagcccccgccggccgcgtcc 1419
>gb| AC005186.3 | Homo sapiens 12 PAC RP5-916L7 (Roswell Park Cancer Institute Human PAC
Library) complete sequence
Length = 134471
Score = 42.1 bits (21), Expect = 0.61
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 131 gcgcgtggcggaggggaggggctgc 155
||||| |||||||||||||||||||
Sbjct: 40054 gcgcgaggcggaggggaggggctgc 40030
>dbj| AP003564.2 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
clone:OSJNBa0062J13
Length = 152837
Score = 42.1 bits (21), Expect = 0.61
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 57 cggggatggcgacggtggcga 77
|||||||||||||||||||||
Sbjct: 71965 cggggatggcgacggtggcga 71985
>dbj| AP003577.3 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
clone:P0664F03
Length = 184242
Score = 42.1 bits (21), Expect = 0.61
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 61 gatggcgacggtggcgatgga 81
|||||||||||||||||||||
Sbjct: 31689 gatggcgacggtggcgatgga 31709
>dbj| AK071942.1 | Oryza sativa (japonica cultivar-group) cDNA clone:J013082G08, full
insert sequence
Length = 1514
Score = 42.1 bits (21), Expect = 0.61
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 57 cggggatggcgacggtggcga 77
|||||||||||||||||||||
Sbjct: 409 cggggatggcgacggtggcga 429
>gb| AC116825.23 | Mus musculus chromosome 8, clone RP24-367H14, complete sequence
Length = 182808
Score = 40.1 bits (20), Expect = 2.4
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 137 ggcggaggggaggggctgcggcag 160
||||||||||||||| ||||||||
Sbjct: 150606 ggcggaggggagggggtgcggcag 150629
>gb| AC116758.11 | Mus musculus chromosome 8, clone RP23-383A10, complete sequence
Length = 190294
Score = 40.1 bits (20), Expect = 2.4
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 137 ggcggaggggaggggctgcggcag 160
||||||||||||||| ||||||||
Sbjct: 18177 ggcggaggggagggggtgcggcag 18200
>gb| AC008255.9 | Drosophila melanogaster clone BACR48D17, complete sequence
Length = 183316
Score = 40.1 bits (20), Expect = 2.4
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 140 ggaggggaggggctgcggca 159
||||||||||||||||||||
Sbjct: 164658 ggaggggaggggctgcggca 164639
>emb| AM039952.1 | Xanthomonas campestris pv. vesicatoria complete genome
Length = 5178466
Score = 40.1 bits (20), Expect = 2.4
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 161 tactacctgcagcacatcca 180
||||||||||||||||||||
Sbjct: 2606139 tactacctgcagcacatcca 2606120
>ref| XM_940063.1 | PREDICTED: Homo sapiens ankyrin repeat domain 24 (ANKRD24), mRNA
Length = 3852
Score = 40.1 bits (20), Expect = 2.4
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 115 cgagtcggccaagggcgcgc 134
||||||||||||||||||||
Sbjct: 102 cgagtcggccaagggcgcgc 83
>ref| XM_114000.5 | PREDICTED: Homo sapiens ankyrin repeat domain 24 (ANKRD24), mRNA
Length = 3852
Score = 40.1 bits (20), Expect = 2.4
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 115 cgagtcggccaagggcgcgc 134
||||||||||||||||||||
Sbjct: 102 cgagtcggccaagggcgcgc 83
>emb| AL116566.1 |CNS01DA6 Botrytis cinerea strain T4 cDNA library
Length = 600
Score = 40.1 bits (20), Expect = 2.4
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 38 aagaaacccaaccaaacccc 57
||||||||||||||||||||
Sbjct: 520 aagaaacccaaccaaacccc 501
>dbj| AP008218.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
sequence
Length = 27566993
Score = 40.1 bits (20), Expect = 2.4
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 58 ggggatggcgacggtggcga 77
||||||||||||||||||||
Sbjct: 4003988 ggggatggcgacggtggcga 4003969
>gb| AC018488.7 |AC018488 Drosophila melanogaster, chromosome X, region 13A-13B, BAC clone
BACR09F03, complete sequence
Length = 165118
Score = 40.1 bits (20), Expect = 2.4
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 140 ggaggggaggggctgcggca 159
||||||||||||||||||||
Sbjct: 150328 ggaggggaggggctgcggca 150347
>dbj| AK111154.1 | Oryza sativa (japonica cultivar-group) cDNA clone:002-176-G07, full
insert sequence
Length = 3280
Score = 40.1 bits (20), Expect = 2.4
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 137 ggcggaggggaggggctgcg 156
||||||||||||||||||||
Sbjct: 260 ggcggaggggaggggctgcg 241
>gb| AY104042.1 | Zea mays PCO094376 mRNA sequence
Length = 918
Score = 40.1 bits (20), Expect = 2.4
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 105 cgtccggcgacgagtcggcc 124
||||||||||||||||||||
Sbjct: 281 cgtccggcgacgagtcggcc 300
>gb| AC006930.1 |AC006930 Homo sapiens chromosome 19, cosmid R33243, complete sequence
Length = 41055
Score = 40.1 bits (20), Expect = 2.4
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 115 cgagtcggccaagggcgcgc 134
||||||||||||||||||||
Sbjct: 23892 cgagtcggccaagggcgcgc 23873
>gb| AE003498.5 | Drosophila melanogaster chromosome X, section 50 of 74 of the complete
sequence
Length = 341520
Score = 40.1 bits (20), Expect = 2.4
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 140 ggaggggaggggctgcggca 159
||||||||||||||||||||
Sbjct: 151083 ggaggggaggggctgcggca 151102
>gb| DQ065771.1 | Polyangium cellulosum hypothetical protein gene, complete cds;
chivosazol biosynthetic gene cluster, complete sequence;
and hypothetical protein gene, complete cds
Length = 96547
Score = 40.1 bits (20), Expect = 2.4
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 95 ccgccggccgcgtccggcgacgag 118
||||||||||||||||||| ||||
Sbjct: 64723 ccgccggccgcgtccggcgtcgag 64746
>gb| DP000011.1 | Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
Length = 27492551
Score = 40.1 bits (20), Expect = 2.4
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 58 ggggatggcgacggtggcga 77
||||||||||||||||||||
Sbjct: 4003975 ggggatggcgacggtggcga 4003956
>emb| AL731882.2 |CNS08C8M Oryza sativa chromosome 12, . BAC OSJNBb0028H07 of library OSJNBb from
chromosome 12 of cultivar Nipponbare of ssp. japonica of
Oryza sativa (rice), complete sequence
Length = 132682
Score = 40.1 bits (20), Expect = 2.4
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 58 ggggatggcgacggtggcga 77
||||||||||||||||||||
Sbjct: 40409 ggggatggcgacggtggcga 40390
>ref| NM_000262.1 | Homo sapiens N-acetylgalactosaminidase, alpha- (NAGA), mRNA
Length = 3598
Score = 38.2 bits (19), Expect = 9.5
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 138 gcggaggggaggggctgcggcag 160
||||||||| |||||||||||||
Sbjct: 111 gcggaggggcggggctgcggcag 89
>gb| AC132489.2 | Oryza sativa (japonica cultivar-group) chromosome 5 clone P0537C11,
complete sequence
Length = 146677
Score = 38.2 bits (19), Expect = 9.5
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 127 gggcgcgcgtggcggaggggagg 149
||||||||||||||| |||||||
Sbjct: 77523 gggcgcgcgtggcggcggggagg 77501
>ref| XM_322902.1 | Neurospora crassa OR74A predicted protein (NCU03601.1) partial mRNA
Length = 912
Score = 38.2 bits (19), Expect = 9.5
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 58 ggggatggcgacggtggcg 76
|||||||||||||||||||
Sbjct: 483 ggggatggcgacggtggcg 465
>ref| XM_612423.2 | PREDICTED: Bos taurus similar to astrotactin 2 isoform a
(LOC533120), mRNA
Length = 1721
Score = 38.2 bits (19), Expect = 9.5
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 25 cgagcgcagggagaagaaa 43
|||||||||||||||||||
Sbjct: 4 cgagcgcagggagaagaaa 22
>ref| XM_956235.1 | Neurospora crassa OR74A hypothetical protein (NCU03601.1) partial
mRNA
Length = 912
Score = 38.2 bits (19), Expect = 9.5
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 58 ggggatggcgacggtggcg 76
|||||||||||||||||||
Sbjct: 483 ggggatggcgacggtggcg 465
>ref| XM_676825.1 | Aspergillus nidulans FGSC A4 hypothetical protein (AN8648.2), mRNA
Length = 4746
Score = 38.2 bits (19), Expect = 9.5
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 109 cggcgacgagtcggccaag 127
|||||||||||||||||||
Sbjct: 4459 cggcgacgagtcggccaag 4441
>ref| XM_676154.1 | Aspergillus nidulans FGSC A4 hypothetical protein (AN7977.2), mRNA
Length = 921
Score = 38.2 bits (19), Expect = 9.5
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 109 cggcgacgagtcggccaag 127
|||||||||||||||||||
Sbjct: 552 cggcgacgagtcggccaag 534
>ref| XM_676010.1 | Aspergillus nidulans FGSC A4 hypothetical protein (AN7833.2), mRNA
Length = 417
Score = 38.2 bits (19), Expect = 9.5
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 109 cggcgacgagtcggccaag 127
|||||||||||||||||||
Sbjct: 250 cggcgacgagtcggccaag 232
>ref| XM_659606.1 | Aspergillus nidulans FGSC A4 hypothetical protein (AN7094.2), mRNA
Length = 1005
Score = 38.2 bits (19), Expect = 9.5
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 109 cggcgacgagtcggccaag 127
|||||||||||||||||||
Sbjct: 718 cggcgacgagtcggccaag 700
>ref| XM_656492.1 | Aspergillus nidulans FGSC A4 hypothetical protein (AN3980.2), mRNA
Length = 1029
Score = 38.2 bits (19), Expect = 9.5
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 109 cggcgacgagtcggccaag 127
|||||||||||||||||||
Sbjct: 742 cggcgacgagtcggccaag 724
>ref| XM_655855.1 | Aspergillus nidulans FGSC A4 hypothetical protein (AN3343.2), mRNA
Length = 2883
Score = 38.2 bits (19), Expect = 9.5
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 109 cggcgacgagtcggccaag 127
|||||||||||||||||||
Sbjct: 2596 cggcgacgagtcggccaag 2578
>ref| XM_655308.1 | Aspergillus nidulans FGSC A4 hypothetical protein (AN2796.2), mRNA
Length = 2061
Score = 38.2 bits (19), Expect = 9.5
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 109 cggcgacgagtcggccaag 127
|||||||||||||||||||
Sbjct: 1774 cggcgacgagtcggccaag 1756
>ref| XM_655223.1 | Aspergillus nidulans FGSC A4 hypothetical protein (AN2711.2), mRNA
Length = 2001
Score = 38.2 bits (19), Expect = 9.5
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 109 cggcgacgagtcggccaag 127
|||||||||||||||||||
Sbjct: 1714 cggcgacgagtcggccaag 1696
>ref| XM_655173.1 | Aspergillus nidulans FGSC A4 hypothetical protein (AN2661.2), mRNA
Length = 4617
Score = 38.2 bits (19), Expect = 9.5
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 109 cggcgacgagtcggccaag 127
|||||||||||||||||||
Sbjct: 4330 cggcgacgagtcggccaag 4312
>ref| XM_653133.1 | Aspergillus nidulans FGSC A4 hypothetical protein (AN0621.2), mRNA
Length = 1218
Score = 38.2 bits (19), Expect = 9.5
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 109 cggcgacgagtcggccaag 127
|||||||||||||||||||
Sbjct: 931 cggcgacgagtcggccaag 913
>ref| XM_652880.1 | Aspergillus nidulans FGSC A4 hypothetical protein (AN0368.2), mRNA
Length = 4236
Score = 38.2 bits (19), Expect = 9.5
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 109 cggcgacgagtcggccaag 127
|||||||||||||||||||
Sbjct: 3949 cggcgacgagtcggccaag 3931
>ref| NM_000945.3 | Homo sapiens protein phosphatase 3 (formerly 2B), regulatory
subunit B, 19kDa, alpha isoform (calcineurin B, type I)
(PPP3R1), mRNA
Length = 3111
Score = 38.2 bits (19), Expect = 9.5
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 127 gggcgcgcgtggcggaggggagg 149
|||||||||||| ||||||||||
Sbjct: 272 gggcgcgcgtgggggaggggagg 250
>gb| CP000115.1 | Nitrobacter winogradskyi Nb-255, complete genome
Length = 3402093
Score = 38.2 bits (19), Expect = 9.5
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 170 cagcacatccacgacctgc 188
|||||||||||||||||||
Sbjct: 1747021 cagcacatccacgacctgc 1747003
>gb| DP000009.1 | Oryza sativa (japonica cultivar-group) chromosome 3
Length = 36102668
Score = 38.2 bits (19), Expect = 9.5
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 58 ggggatggcgacggtggcgatgg 80
||||||||||| |||||||||||
Sbjct: 3608105 ggggatggcgatggtggcgatgg 3608127
>ref| XM_543239.2 | PREDICTED: Canis familiaris similar to NK2 transcription factor
related, locus 6 (LOC486113), mRNA
Length = 1029
Score = 38.2 bits (19), Expect = 9.5
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 138 gcggaggggaggggctgcg 156
|||||||||||||||||||
Sbjct: 435 gcggaggggaggggctgcg 417
>gb| AC121914.3 | Mus musculus BAC clone RP24-186A10 from chromosome 3, complete sequence
Length = 172937
Score = 38.2 bits (19), Expect = 9.5
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 136 tggcggaggggaggggctg 154
|||||||||||||||||||
Sbjct: 155809 tggcggaggggaggggctg 155791
>gb| DQ144434.1 | Ascocalyx abietina clone pCAT-700-B1-a microsatellite sequence
Length = 651
Score = 38.2 bits (19), Expect = 9.5
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 66 cgacggtggcgatggacat 84
|||||||||||||||||||
Sbjct: 99 cgacggtggcgatggacat 117
>gb| DQ144433.1 | Ascocalyx abietina clone pCAT-700-AU58-j microsatellite sequence
Length = 636
Score = 38.2 bits (19), Expect = 9.5
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 66 cgacggtggcgatggacat 84
|||||||||||||||||||
Sbjct: 100 cgacggtggcgatggacat 118
>emb| X52980.1 |SCCSA1 Streptomyces coelicolor hrdA gene for principal sigma factor
Length = 1902
Score = 38.2 bits (19), Expect = 9.5
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 91 gcccccgccggccgcgtcc 109
|||||||||||||||||||
Sbjct: 512 gcccccgccggccgcgtcc 530
>gb| AC027038.12 | Oryza sativa chromosome 10 BAC OSJNBa0071K18 genomic sequence, complete
sequence
Length = 149758
Score = 38.2 bits (19), Expect = 9.5
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 127 gggcgcgcgtggcggaggggagg 149
|||||||| ||||||||||||||
Sbjct: 36787 gggcgcgcctggcggaggggagg 36765
>emb| AL939112.1 |SCO939112 Streptomyces coelicolor A3(2) complete genome; segment 9/29
Length = 300800
Score = 38.2 bits (19), Expect = 9.5
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 91 gcccccgccggccgcgtcc 109
|||||||||||||||||||
Sbjct: 231071 gcccccgccggccgcgtcc 231053
>emb| AL670005.1 |NCB11H24 Neurospora crassa DNA linkage group V BAC clone B11H24
Length = 72580
Score = 38.2 bits (19), Expect = 9.5
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 58 ggggatggcgacggtggcg 76
|||||||||||||||||||
Sbjct: 23193 ggggatggcgacggtggcg 23211
>gb| AC009166.4 | Homo sapiens chromosome 16 clone RP11-80B1, complete sequence
Length = 174550
Score = 38.2 bits (19), Expect = 9.5
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 140 ggaggggaggggctgcggc 158
|||||||||||||||||||
Sbjct: 79624 ggaggggaggggctgcggc 79606
>gb| AC092802.2 | Homo sapiens chromosome 1 clone RP11-57H12, complete sequence
Length = 163331
Score = 38.2 bits (19), Expect = 9.5
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 133 gcgtggcggaggggagggg 151
|||||||||||||||||||
Sbjct: 17891 gcgtggcggaggggagggg 17909
>gb| AE008686.1 |AE008686 Mus musculus T-cell receptor alpha/delta locus section 4 of 4 of the
complete region
Length = 461875
Score = 38.2 bits (19), Expect = 9.5
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 39 agaaacccaaccaaacccc 57
|||||||||||||||||||
Sbjct: 409982 agaaacccaaccaaacccc 409964
>gb| AE017285.1 | Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete genome
Length = 3570858
Score = 38.2 bits (19), Expect = 9.5
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 67 gacggtggcgatggacatc 85
|||||||||||||||||||
Sbjct: 2038483 gacggtggcgatggacatc 2038465
>dbj| AK030929.1 | Mus musculus adult male thymus cDNA, RIKEN full-length enriched
library, clone:5830462E15 product:unclassifiable, full
insert sequence
Length = 3055
Score = 38.2 bits (19), Expect = 9.5
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 39 agaaacccaaccaaacccc 57
|||||||||||||||||||
Sbjct: 2746 agaaacccaaccaaacccc 2728
>ref| NM_001024505.1 | Bos taurus engulfment and cell motility 1 isoform 2 (ELMO1), mRNA
Length = 2001
Score = 38.2 bits (19), Expect = 9.5
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 30 gcagggagaagaaacccaa 48
|||||||||||||||||||
Sbjct: 1515 gcagggagaagaaacccaa 1497
>dbj| AP008216.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
sequence
Length = 22685906
Score = 38.2 bits (19), Expect = 9.5
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 127 gggcgcgcgtggcggaggggagg 149
|||||||| ||||||||||||||
Sbjct: 16623455 gggcgcgcctggcggaggggagg 16623477
>dbj| AP008211.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
sequence
Length = 29737217
Score = 38.2 bits (19), Expect = 9.5
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 127 gggcgcgcgtggcggaggggagg 149
||||||||||||||| |||||||
Sbjct: 9305578 gggcgcgcgtggcggcggggagg 9305556
>dbj| AP008209.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
sequence
Length = 36192742
Score = 38.2 bits (19), Expect = 9.5
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 58 ggggatggcgacggtggcgatgg 80
||||||||||| |||||||||||
Sbjct: 3608216 ggggatggcgatggtggcgatgg 3608238
>gb| AC007498.7 | Homo sapiens chromosome 16 clone RP11-424K7, complete sequence
Length = 176248
Score = 38.2 bits (19), Expect = 9.5
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 140 ggaggggaggggctgcggc 158
|||||||||||||||||||
Sbjct: 50274 ggaggggaggggctgcggc 50256
>gb| AC017083.7 | Homo sapiens BAC clone RP11-474G23 from 2, complete sequence
Length = 198278
Score = 38.2 bits (19), Expect = 9.5
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 127 gggcgcgcgtggcggaggggagg 149
|||||||||||| ||||||||||
Sbjct: 171759 gggcgcgcgtgggggaggggagg 171781
>gb| AC152829.2 | Ornithorhynchus anatinus BAC clone OABb-466A1 from chromosome unknown,
complete sequence
Length = 160523
Score = 38.2 bits (19), Expect = 9.5
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 32 agggagaagaaacccaacc 50
|||||||||||||||||||
Sbjct: 20323 agggagaagaaacccaacc 20341
>gb| AC107225.2 | Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0026H19,
complete sequence
Length = 150620
Score = 38.2 bits (19), Expect = 9.5
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 58 ggggatggcgacggtggcgatgg 80
||||||||||| |||||||||||
Sbjct: 125758 ggggatggcgatggtggcgatgg 125780
>dbj| AB008267.1 | Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MMG4
Length = 79046
Score = 38.2 bits (19), Expect = 9.5
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 32 agggagaagaaacccaacc 50
|||||||||||||||||||
Sbjct: 70973 agggagaagaaacccaacc 70955
>dbj| AK107307.1 | Oryza sativa (japonica cultivar-group) cDNA clone:002-126-D03,
full insert sequence
Length = 899
Score = 38.2 bits (19), Expect = 9.5
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 58 ggggatggcgacggtggcgatgg 80
||||||||||| |||||||||||
Sbjct: 38 ggggatggcgatggtggcgatgg 60
>emb| CT573326.1 | Pseudomonas entomophila str. L48 chromosome,complete sequence
Length = 5888780
Score = 38.2 bits (19), Expect = 9.5
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 58 ggggatggcgacggtggcg 76
|||||||||||||||||||
Sbjct: 5579502 ggggatggcgacggtggcg 5579520
>emb| AL646052.1 | Ralstonia solanacearum GMI1000 chromosome complete sequence
Length = 3716413
Score = 38.2 bits (19), Expect = 9.5
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 160 gtactacctgcagcacatc 178
|||||||||||||||||||
Sbjct: 1326117 gtactacctgcagcacatc 1326099
>gb| AY108343.1 | Zea mays PCO065510 mRNA sequence
Length = 1496
Score = 38.2 bits (19), Expect = 9.5
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 103 cgcgtccggcgacgagtcg 121
|||||||||||||||||||
Sbjct: 1493 cgcgtccggcgacgagtcg 1475
>gb| BT020663.1 | Bos taurus engulfment and cell motility 1 (ced-12 homolog, C.
elegans) (ELMO1), mRNA, complete cds
Length = 1966
Score = 38.2 bits (19), Expect = 9.5
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 30 gcagggagaagaaacccaa 48
|||||||||||||||||||
Sbjct: 1486 gcagggagaagaaacccaa 1468
>gb| BT020638.1 | Bos taurus engulfment and cell motility 1 (ced-12 homolog, C.
elegans) (ELMO1), mRNA, complete cds
Length = 2001
Score = 38.2 bits (19), Expect = 9.5
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 30 gcagggagaagaaacccaa 48
|||||||||||||||||||
Sbjct: 1515 gcagggagaagaaacccaa 1497
>emb| X82289.1 |ANAPSA A.nidulans apsA gene
Length = 8584
Score = 38.2 bits (19), Expect = 9.5
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 109 cggcgacgagtcggccaag 127
|||||||||||||||||||
Sbjct: 267 cggcgacgagtcggccaag 249
>emb| Y13918.1 |PABY13918 Pseudomonas aeruginosa phage phi CTX DNA, complete genome
Length = 35559
Score = 38.2 bits (19), Expect = 9.5
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 165 acctgcagcacatccacgacctgcagc 191
|||||||||||| ||||| ||||||||
Sbjct: 19541 acctgcagcacagccacgccctgcagc 19567
>dbj| AP001786.4 | Homo sapiens genomic DNA, chromosome 11q, clone:RP11-176J24, complete
sequences
Length = 171744
Score = 38.2 bits (19), Expect = 9.5
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 31 cagggagaagaaacccaac 49
|||||||||||||||||||
Sbjct: 121763 cagggagaagaaacccaac 121745
>gb| CP000159.1 | Salinibacter ruber DSM 13855, complete genome
Length = 3551823
Score = 38.2 bits (19), Expect = 9.5
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 53 accccggggatggcgacggtggcgatg 79
|||||||||||||||| | ||||||||
Sbjct: 2082448 accccggggatggcgatgatggcgatg 2082474
>gb| AE016959.3 | Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
Length = 22698374
Score = 38.2 bits (19), Expect = 9.5
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 127 gggcgcgcgtggcggaggggagg 149
|||||||| ||||||||||||||
Sbjct: 16631696 gggcgcgcctggcggaggggagg 16631718
>gb| BC027913.1 | Homo sapiens protein phosphatase 3 (formerly 2B), regulatory
subunit B, 19kDa, alpha isoform (calcineurin B, type I),
mRNA (cDNA clone MGC:34569 IMAGE:5210939), complete cds
Length = 3112
Score = 38.2 bits (19), Expect = 9.5
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 127 gggcgcgcgtggcggaggggagg 149
|||||||||||| ||||||||||
Sbjct: 268 gggcgcgcgtgggggaggggagg 246
>gb| M59199.1 |HUMAGAL Human alpha-N-acetylgalactosaminidase (NAGA) gene, complete cds
Length = 13663
Score = 38.2 bits (19), Expect = 9.5
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 138 gcggaggggaggggctgcggcag 160
||||||||| |||||||||||||
Sbjct: 1431 gcggaggggcggggctgcggcag 1409
>gb| M62783.1 |HUMAGALNA Human alpha-N-acetylgalactosaminidase mRNA, complete cds
Length = 3598
Score = 38.2 bits (19), Expect = 9.5
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 138 gcggaggggaggggctgcggcag 160
||||||||| |||||||||||||
Sbjct: 111 gcggaggggcggggctgcggcag 89
>gb| M16638.1 |CHKTBBPHS Chicken beta-2 tubulin gene promoter region with nuclease
hypersensitive site (HS)
Length = 126
Score = 38.2 bits (19), Expect = 9.5
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 140 ggaggggaggggctgcggc 158
|||||||||||||||||||
Sbjct: 25 ggaggggaggggctgcggc 7
>gb| M64239.1 |MUSTCRA Mouse T-cell receptor alpha/delta chain locus
Length = 94647
Score = 38.2 bits (19), Expect = 9.5
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 39 agaaacccaaccaaacccc 57
|||||||||||||||||||
Sbjct: 42754 agaaacccaaccaaacccc 42736
>dbj| AB008550.1 | Pseudomonas aeruginosa phage phi CTX, complete genome sequence
Length = 35580
Score = 38.2 bits (19), Expect = 9.5
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 165 acctgcagcacatccacgacctgcagc 191
|||||||||||| ||||| ||||||||
Sbjct: 19541 acctgcagcacagccacgccctgcagc 19567
Database: nt
Posted date: May 29, 2006 11:10 AM
Number of letters in database: 3,984,495,279
Number of sequences in database: 917,343
Database: /shigen/export/home/twatanab/db/nt/nt.01
Posted date: May 29, 2006 11:16 AM
Number of letters in database: 3,988,174,986
Number of sequences in database: 835,257
Database: /shigen/export/home/twatanab/db/nt/nt.02
Posted date: May 29, 2006 11:21 AM
Number of letters in database: 3,991,246,324
Number of sequences in database: 771,481
Database: /shigen/export/home/twatanab/db/nt/nt.03
Posted date: May 29, 2006 11:27 AM
Number of letters in database: 3,990,718,311
Number of sequences in database: 977,174
Database: /shigen/export/home/twatanab/db/nt/nt.04
Posted date: May 29, 2006 11:29 AM
Number of letters in database: 1,278,410,368
Number of sequences in database: 400,813
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,448,856
Number of Sequences: 3902068
Number of extensions: 1448856
Number of successful extensions: 112358
Number of sequences better than 10.0: 100
Number of HSP's better than 10.0 without gapping: 101
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 110537
Number of HSP's gapped (non-prelim): 1822
length of query: 192
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 170
effective length of database: 17,147,199,772
effective search space: 2915023961240
effective search space used: 2915023961240
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)