ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart45f09 |
|---|---|
| Clone Library Name | barley_pub |
>XTH_SOYBN (Q39857) Probable xyloglucan endotransglucosylase/hydrolase| precursor (EC 2.4.1.207) (Fragment) Length = 295 Score = 33.1 bits (74), Expect = 0.23 Identities = 14/17 (82%), Positives = 16/17 (94%) Frame = +2 Query: 2 VPGDSAGTVTTFYLTSK 52 VPGDSAGTVT FYL+S+ Sbjct: 85 VPGDSAGTVTAFYLSSQ 101
>XTHA_PHAAN (Q41638) Xyloglucan endotransglucosylase/hydrolase protein A| precursor (EC 2.4.1.207) (VaXTH1) Length = 292 Score = 32.7 bits (73), Expect = 0.30 Identities = 14/16 (87%), Positives = 15/16 (93%) Frame = +2 Query: 2 VPGDSAGTVTTFYLTS 49 VPGDSAGTVT FYL+S Sbjct: 83 VPGDSAGTVTAFYLSS 98
>XTH21_ARATH (Q9ZV40) Probable xyloglucan endotransglucosylase/hydrolase protein| 21 precursor (EC 2.4.1.207) (At-XTH21) (XTH-21) Length = 305 Score = 32.3 bits (72), Expect = 0.39 Identities = 14/17 (82%), Positives = 16/17 (94%) Frame = +2 Query: 2 VPGDSAGTVTTFYLTSK 52 VPG+SAGTVTTFYL S+ Sbjct: 80 VPGNSAGTVTTFYLKSQ 96
>XTH24_ARATH (P24806) Xyloglucan endotransglucosylase/hydrolase protein 24| precursor (EC 2.4.1.207) (At-XTH24) (XTH-24) (Meristem protein 5) (MERI-5 protein) (MERI5 protein) (Endo-xyloglucan transferase) (Xyloglucan endo-1,4-beta-D-glucanase) Length = 269 Score = 32.3 bits (72), Expect = 0.39 Identities = 14/17 (82%), Positives = 16/17 (94%) Frame = +2 Query: 2 VPGDSAGTVTTFYLTSK 52 VPG+SAGTVTTFYL S+ Sbjct: 76 VPGNSAGTVTTFYLKSE 92
>XTH20_ARATH (Q9FI31) Probable xyloglucan endotransglucosylase/hydrolase protein| 20 precursor (EC 2.4.1.207) (At-XTH20) (XTH-20) Length = 282 Score = 32.0 bits (71), Expect = 0.52 Identities = 14/16 (87%), Positives = 15/16 (93%) Frame = +2 Query: 2 VPGDSAGTVTTFYLTS 49 VPG+SAGTVTTFYL S Sbjct: 82 VPGNSAGTVTTFYLKS 97
>XTH18_ARATH (Q9M0D2) Probable xyloglucan endotransglucosylase/hydrolase protein| 18 precursor (EC 2.4.1.207) (At-XTH18) (XTH-18) Length = 282 Score = 32.0 bits (71), Expect = 0.52 Identities = 14/16 (87%), Positives = 15/16 (93%) Frame = +2 Query: 2 VPGDSAGTVTTFYLTS 49 VPG+SAGTVTTFYL S Sbjct: 82 VPGNSAGTVTTFYLKS 97
>XTH17_ARATH (O80803) Probable xyloglucan endotransglucosylase/hydrolase protein| 17 precursor (EC 2.4.1.207) (At-XTH17) (XTH-17) Length = 282 Score = 32.0 bits (71), Expect = 0.52 Identities = 14/16 (87%), Positives = 15/16 (93%) Frame = +2 Query: 2 VPGDSAGTVTTFYLTS 49 VPG+SAGTVTTFYL S Sbjct: 82 VPGNSAGTVTTFYLKS 97
>XTH19_ARATH (Q9M0D1) Probable xyloglucan endotransglucosylase/hydrolase protein| 19 precursor (EC 2.4.1.207) (At-XTH19) (XTH-19) Length = 277 Score = 32.0 bits (71), Expect = 0.52 Identities = 14/16 (87%), Positives = 15/16 (93%) Frame = +2 Query: 2 VPGDSAGTVTTFYLTS 49 VPG+SAGTVTTFYL S Sbjct: 77 VPGNSAGTVTTFYLKS 92
>XTH12_ARATH (Q9FKL9) Probable xyloglucan endotransglucosylase/hydrolase protein| 12 precursor (EC 2.4.1.207) (At-XTH12) (XTH-12) Length = 285 Score = 31.6 bits (70), Expect = 0.67 Identities = 13/17 (76%), Positives = 16/17 (94%) Frame = +2 Query: 2 VPGDSAGTVTTFYLTSK 52 VPG+SAGTVT +YL+SK Sbjct: 79 VPGNSAGTVTAYYLSSK 95
>XTH7_ARATH (Q8LER3) Probable xyloglucan endotransglucosylase/hydrolase protein| 7 precursor (EC 2.4.1.207) (At-XTH7) (XTH-7) Length = 293 Score = 31.2 bits (69), Expect = 0.88 Identities = 12/16 (75%), Positives = 14/16 (87%) Frame = +2 Query: 2 VPGDSAGTVTTFYLTS 49 +PGDSAGTVT FY+ S Sbjct: 86 IPGDSAGTVTAFYMNS 101
>XTH6_ARATH (Q8LF99) Probable xyloglucan endotransglucosylase/hydrolase protein| 6 precursor (EC 2.4.1.207) (At-XTH6) (XTH-6) Length = 292 Score = 31.2 bits (69), Expect = 0.88 Identities = 12/16 (75%), Positives = 14/16 (87%) Frame = +2 Query: 2 VPGDSAGTVTTFYLTS 49 +PGDSAGTVT FY+ S Sbjct: 87 IPGDSAGTVTAFYMNS 102
>XTH25_ARATH (Q38907) Probable xyloglucan endotransglucosylase/hydrolase protein| 25 precursor (EC 2.4.1.207) (At-XTH25) (XTH-25) Length = 284 Score = 30.8 bits (68), Expect = 1.1 Identities = 13/17 (76%), Positives = 15/17 (88%) Frame = +2 Query: 2 VPGDSAGTVTTFYLTSK 52 VPG+SAGTVT +YL SK Sbjct: 82 VPGNSAGTVTAYYLKSK 98
>XTH5_ARATH (Q9XIW1) Probable xyloglucan endotransglucosylase/hydrolase protein| 5 precursor (EC 2.4.1.207) (At-XTH5) (XTH-5) Length = 293 Score = 30.0 bits (66), Expect = 2.0 Identities = 13/17 (76%), Positives = 15/17 (88%) Frame = +2 Query: 2 VPGDSAGTVTTFYLTSK 52 V GDSAGTVT FYL+S+ Sbjct: 84 VAGDSAGTVTAFYLSSQ 100
>XTH_WHEAT (Q41542) Probable xyloglucan endotransglucosylase/hydrolase| precursor (EC 2.4.1.207) Length = 293 Score = 29.6 bits (65), Expect = 2.6 Identities = 13/17 (76%), Positives = 15/17 (88%) Frame = +2 Query: 2 VPGDSAGTVTTFYLTSK 52 V GDSAGTVT FYL+S+ Sbjct: 84 VGGDSAGTVTAFYLSSQ 100
>XTHB_PHAAN (Q8LNZ5) Probable xyloglucan endotransglucosylase/hydrolase protein| B precursor (EC 2.4.1.207) (VaXTH2) Length = 293 Score = 29.6 bits (65), Expect = 2.6 Identities = 13/17 (76%), Positives = 15/17 (88%) Frame = +2 Query: 2 VPGDSAGTVTTFYLTSK 52 VPGDSAGTVT F L+S+ Sbjct: 84 VPGDSAGTVTAFCLSSQ 100
>XTH2_ARATH (Q9SV60) Putative xyloglucan endotransglucosylase/hydrolase protein| 2 precursor (EC 2.4.1.207) (At-XTH2) (XTH-2) Length = 292 Score = 29.6 bits (65), Expect = 2.6 Identities = 13/16 (81%), Positives = 13/16 (81%) Frame = +2 Query: 5 PGDSAGTVTTFYLTSK 52 P DSAG VT FYLTSK Sbjct: 85 PRDSAGVVTAFYLTSK 100
>XTH22_ARATH (Q38857) Xyloglucan endotransglucosylase/hydrolase protein 22| precursor (EC 2.4.1.207) (At-XTH22) (XTH-22) (Touch protein 4) Length = 284 Score = 29.6 bits (65), Expect = 2.6 Identities = 13/16 (81%), Positives = 14/16 (87%) Frame = +2 Query: 2 VPGDSAGTVTTFYLTS 49 VPG+SAGTVTT YL S Sbjct: 75 VPGNSAGTVTTLYLKS 90
>XTH9_ARATH (Q8LDW9) Xyloglucan endotransglucosylase/hydrolase protein 9| precursor (EC 2.4.1.207) (At-XTH9) (XTH-9) Length = 290 Score = 28.9 bits (63), Expect = 4.4 Identities = 12/16 (75%), Positives = 14/16 (87%) Frame = +2 Query: 2 VPGDSAGTVTTFYLTS 49 V GDSAGTVT FY++S Sbjct: 79 VEGDSAGTVTAFYMSS 94
>XTH14_ARATH (Q9ZSU4) Xyloglucan endotransglucosylase/hydrolase protein 14| precursor (EC 2.4.1.207) (At-XTH14) (XTH-14) Length = 287 Score = 28.5 bits (62), Expect = 5.7 Identities = 12/17 (70%), Positives = 15/17 (88%) Frame = +2 Query: 2 VPGDSAGTVTTFYLTSK 52 V G+SAGTVT +YL+SK Sbjct: 82 VAGNSAGTVTAYYLSSK 98
>XTH13_ARATH (Q9FKL8) Putative xyloglucan endotransglucosylase/hydrolase protein| 13 precursor (EC 2.4.1.207) (At-XTH13) (XTH-13) Length = 284 Score = 28.5 bits (62), Expect = 5.7 Identities = 12/17 (70%), Positives = 15/17 (88%) Frame = +2 Query: 2 VPGDSAGTVTTFYLTSK 52 V G+SAGTVT +YL+SK Sbjct: 78 VAGNSAGTVTAYYLSSK 94
>XTH8_ORYSA (Q76BW5) Xyloglucan endotransglycosylase/hydrolase protein 8| precursor (EC 2.4.1.207) (End-xyloglucan transferase) (OsXTH8) (OsXRT5) Length = 290 Score = 27.7 bits (60), Expect = 9.7 Identities = 12/16 (75%), Positives = 15/16 (93%) Frame = +2 Query: 2 VPGDSAGTVTTFYLTS 49 V G+SAGTVT+FYL+S Sbjct: 83 VGGNSAGTVTSFYLSS 98
>XTH26_ARATH (Q9SVV2) Putative xyloglucan endotransglucosylase/hydrolase protein| 26 precursor (EC 2.4.1.207) (At-XTH26) (XTH-26) Length = 292 Score = 27.7 bits (60), Expect = 9.7 Identities = 11/16 (68%), Positives = 14/16 (87%) Frame = +2 Query: 2 VPGDSAGTVTTFYLTS 49 VPG+SAGTV +YL+S Sbjct: 79 VPGNSAGTVAAYYLSS 94 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 4,591,562 Number of Sequences: 219361 Number of extensions: 20007 Number of successful extensions: 60 Number of sequences better than 10.0: 22 Number of HSP's better than 10.0 without gapping: 60 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 60 length of database: 80,573,946 effective HSP length: 0 effective length of database: 80,573,946 effective search space used: 1933774704 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
