ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart45f05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1UMP6_ARATH (Q9SX77) Unknown protein At1g47420, mitochondrial pre... 107 2e-23
2PHO1_ARATH (Q8S403) Putative phosphate transporter 1 33 0.40
3VHP1_CAEEL (Q10038) Tyrosine-protein phosphatase vhp-1 (EC 3.1.3... 30 4.4
4GDA2_WHEAT (P04722) Alpha/beta-gliadin A-II precursor (Prolamin) 30 4.4
5ATR_YEAST (P38111) Serine/threonine-protein kinase MEC1 (EC 2.7.... 30 4.4
6GPA8_DICDI (P34046) Guanine nucleotide-binding protein alpha-8 s... 29 7.5
7GDA9_WHEAT (P18573) Alpha/beta-gliadin MM1 precursor (Prolamin) 29 9.7

>UMP6_ARATH (Q9SX77) Unknown protein At1g47420, mitochondrial precursor|
          Length = 257

 Score =  107 bits (268), Expect = 2e-23
 Identities = 50/88 (56%), Positives = 66/88 (75%)
 Frame = +2

Query: 278 RMFSSNEKHLPPISDPKIETAFKDLMAASWNELPGSLVEEAKKEVSKATDDKAGQEALEN 457
           R FS +  H+P + D  +  AFKDLMAA W ELP ++V++AK  +SK TDDKAGQEAL+N
Sbjct: 87  RRFSEDVSHMPEMEDSDVLNAFKDLMAADWAELPSAVVKDAKTAISKNTDDKAGQEALKN 146

Query: 458 VFRAAEACEEFSGVLVTLRMALDDLCGL 541
           VFRAAEA EEF G+L +++M +DD  G+
Sbjct: 147 VFRAAEAVEEFGGILTSIKMEIDDSIGM 174



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>PHO1_ARATH (Q8S403) Putative phosphate transporter 1|
          Length = 782

 Score = 33.5 bits (75), Expect = 0.40
 Identities = 19/69 (27%), Positives = 31/69 (44%)
 Frame = +3

Query: 294 MRNICLQYLTRKLRLHLRI*WLPAGMSFRVXXXXXXXXXXXXXXMIRLVKKLWKMYFVQL 473
           +RN    YL+  L L LR+ W+   M FRV              +  + +  W  Y V+ 
Sbjct: 697 LRNKNFYYLSIALNLVLRVAWIETIMRFRVSPVQSHLLDFFLASLEVIRRGHWNFYRVEN 756

Query: 474 KHVKNLVEF 500
           +H+ N+ +F
Sbjct: 757 EHLNNVGQF 765



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>VHP1_CAEEL (Q10038) Tyrosine-protein phosphatase vhp-1 (EC 3.1.3.48) (Vh1 dual|
           specificity phosphatase family protein 1)
          Length = 657

 Score = 30.0 bits (66), Expect = 4.4
 Identities = 23/79 (29%), Positives = 34/79 (43%), Gaps = 3/79 (3%)
 Frame = -3

Query: 528 SSRAILRVTKTPLNSSHASAARNT---FSKAS*PALSSVALDTSFFASSTREPGSSFQLA 358
           SSR ++    TP  SS +S +      FS     + SS+ ++  FFAS+    GSS    
Sbjct: 489 SSREVILTLPTPAASSSSSTSSEPSFDFSSFESSSSSSIVVENPFFASTEVPAGSSSIST 548

Query: 357 AIKSLNAVSIFGSDIGGRC 301
              S +  +   S    RC
Sbjct: 549 PSGSQSTPASASSSAASRC 567



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>GDA2_WHEAT (P04722) Alpha/beta-gliadin A-II precursor (Prolamin)|
          Length = 291

 Score = 30.0 bits (66), Expect = 4.4
 Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 4/66 (6%)
 Frame = -1

Query: 497 LH*ILHMLQLHEIHF--PKLLDQPYHQXXXXXXXXLPQQENPEAHSSWQPS--NP*MQSQ 330
           +H ++H + LH+ H    +   Q   Q         PQQ+ P     +QPS  NP  Q  
Sbjct: 189 IHNVVHAIILHQQHHHHQQQQQQQQQQPLSQVSFQQPQQQYPSGQGFFQPSQQNPQAQGS 248

Query: 329 FSGQIL 312
           F  Q L
Sbjct: 249 FQPQQL 254



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>ATR_YEAST (P38111) Serine/threonine-protein kinase MEC1 (EC 2.7.11.1)|
            (DNA-damage checkpoint kinase MEC1) (Mitosis entry
            checkpoint protein 1) (ATR homolog)
          Length = 2368

 Score = 30.0 bits (66), Expect = 4.4
 Identities = 19/47 (40%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
 Frame = +2

Query: 323  PKIETAFKDLMAASWNELPGSLVEEAKKEVSKATDDKAG--QEALEN 457
            PK+ T + D+ AAS +E PG+     K+ +SKAT+D     +EAL++
Sbjct: 1849 PKVITFWLDIAAASISEAPGN----RKEMLSKATEDICSHVEEALQH 1891



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>GPA8_DICDI (P34046) Guanine nucleotide-binding protein alpha-8 subunit (G|
           alpha-8)
          Length = 403

 Score = 29.3 bits (64), Expect = 7.5
 Identities = 15/40 (37%), Positives = 21/40 (52%)
 Frame = +2

Query: 311 PISDPKIETAFKDLMAASWNELPGSLVEEAKKEVSKATDD 430
           P+    I   +K  +  +W E  G L+EE KK + KAT D
Sbjct: 316 PLHTFHIAARYKKDIKYTWEEAKGILLEENKKVLMKATKD 355



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>GDA9_WHEAT (P18573) Alpha/beta-gliadin MM1 precursor (Prolamin)|
          Length = 307

 Score = 28.9 bits (63), Expect = 9.7
 Identities = 18/60 (30%), Positives = 27/60 (45%)
 Frame = -1

Query: 497 LH*ILHMLQLHEIHFPKLLDQPYHQXXXXXXXXLPQQENPEAHSSWQPSNP*MQSQFSGQ 318
           +H ++H + LH+    +   Q   Q         PQQ+ P    S+QPS    Q+Q S Q
Sbjct: 209 IHNVVHAIILHQQQQQQ--QQQQQQPLSQVSFQQPQQQYPSGQGSFQPSQQNPQAQGSVQ 266


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 53,998,477
Number of Sequences: 219361
Number of extensions: 878420
Number of successful extensions: 2959
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2911
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2959
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4315578075
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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