>Y1620_HAEIN (P44273) Hypothetical protein HI1620|
          Length = 167

 Score = 29.6 bits (65), Expect = 4.8
 Identities = 15/54 (27%), Positives = 28/54 (51%)
 Frame = +3

Query: 330 VILFLLWGLCCCKIGWDSVMRMSVDLRDLFLYEAFLYYNPLLLVALMIWLWGIN 491
           + + L+W     KIG + +    ++ + + L E       LLL++L ++LW IN
Sbjct: 66  IFIVLMWATLSWKIGENGI---ELNFQGIELAEKLSLRTHLLLISLWLFLWNIN 116

>SURF4_CAEEL (Q18864) Surfeit locus protein 4 homolog|
          Length = 277

 Score = 29.6 bits (65), Expect = 4.8
 Identities = 15/57 (26%), Positives = 30/57 (52%)
 Frame = +3

Query: 330 VILFLLWGLCCCKIGWDSVMRMSVDLRDLFLYEAFLYYNPLLLVALMIWLWGINLWV 500
           +++F+   L   ++ +  V+ + V    L    +  Y   L  + L+IWL+G+NLW+
Sbjct: 172 LLIFMFMSLMHFEMSFMQVLEIVVGFA-LITLVSIGYKTKLSAIVLVIWLFGLNLWL 227

>OPS2_DROME (P08099) Opsin Rh2 (Ocellar opsin)|
          Length = 381

 Score = 28.9 bits (63), Expect = 8.2
 Identities = 20/67 (29%), Positives = 27/67 (40%), Gaps = 11/67 (16%)
 Frame = +3

Query: 309 LFLWRVKVILFLL----WG-------LCCCKIGWDSVMRMSVDLRDLFLYEAFLYYNPLL 455
           LF+W + V   ++    W        L  C I  D + RM      L  Y  F+YY PL 
Sbjct: 178 LFIWMMAVFWTVMPLIGWSAYVPEGNLTACSI--DYMTRMWNPRSYLITYSLFVYYTPLF 235

Query: 456 LVALMIW 476
           L+    W
Sbjct: 236 LICYSYW 242


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 51,391,444
Number of Sequences: 219361
Number of extensions: 898514
Number of successful extensions: 2637
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2534
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2637
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3638905326
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)