ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart45e07 |
|---|---|
| Clone Library Name | barley_pub |
>SHAN1_HUMAN (Q9Y566) SH3 and multiple ankyrin repeat domains protein 1 (Shank1)| (Somatostatin receptor-interacting protein) (SSTR-interacting protein) (SSTRIP) Length = 2161 Score = 37.0 bits (84), Expect = 0.021 Identities = 20/63 (31%), Positives = 27/63 (42%), Gaps = 1/63 (1%) Frame = +1 Query: 43 PPPPGHCRRRHLRHSYTPPPLEGRRVPIPHHLPLLRHAAAP-ETPDHGASAPTSTVQGGR 219 P PP H H H + PPP P H P + +P + P A P +++G R Sbjct: 992 PLPPAHHHPPHHHHHHAPPPQPHHHHAHPPHPPEMETGGSPDDPPPRLALGPQPSLRGWR 1051 Query: 220 PGG 228 GG Sbjct: 1052 GGG 1054
>SHAN1_RAT (Q9WV48) SH3 and multiple ankyrin repeat domains protein 1 (Shank1)| (GKAP/SAPAP-interacting protein) (SPANK-1) (Synamon) (Somatostatin receptor-interacting protein) (SSTR-interacting protein) (SSTRIP) Length = 2167 Score = 35.4 bits (80), Expect = 0.062 Identities = 19/61 (31%), Positives = 26/61 (42%), Gaps = 1/61 (1%) Frame = +1 Query: 49 PPGHCRRRHLRHSYTPPPLEGRRVPIPHHLPLLRHAAAP-ETPDHGASAPTSTVQGGRPG 225 PP H H H + PPP P H P + +P + P A P +++G R G Sbjct: 1002 PPAHHHPPHHHHHHAPPPQPHHHHAHPPHPPEMETGGSPDDPPPRLALGPQPSLRGWRGG 1061 Query: 226 G 228 G Sbjct: 1062 G 1062
>CD2_HUMAN (P06729) T-cell surface antigen CD2 precursor (T-cell surface| antigen T11/Leu-5) (LFA-2) (LFA-3 receptor) (Erythrocyte receptor) (Rosette receptor) Length = 351 Score = 33.1 bits (74), Expect = 0.31 Identities = 27/68 (39%), Positives = 29/68 (42%), Gaps = 3/68 (4%) Frame = +1 Query: 34 RHLPPPPGHCRRRHLRHSYTPPPLEGRRVPIPHHLPLLRHAAAPETPDH---GASAPTST 204 +H PPPPGH R S+ PPP G RV H P R A T H G P Sbjct: 280 QHPPPPPGH---RSQAPSHRPPP-PGHRV---QHQPQKRPPAPSGTQVHQQKGPPLPRPR 332 Query: 205 VQGGRPGG 228 VQ P G Sbjct: 333 VQPKPPHG 340 Score = 31.2 bits (69), Expect = 1.2 Identities = 21/51 (41%), Positives = 26/51 (50%) Frame = +1 Query: 37 HLPPPPGHCRRRHLRHSYTPPPLEGRRVPIPHHLPLLRHAAAPETPDHGAS 189 H PPPPGH R +H + PP G +V PL R P+ P HGA+ Sbjct: 295 HRPPPPGH-RVQH-QPQKRPPAPSGTQVHQQKGPPLPRPRVQPK-PPHGAA 342
>YHS4_CAEEL (O18303) Hypothetical protein ZK849.4 in chromosome I| Length = 602 Score = 32.3 bits (72), Expect = 0.52 Identities = 13/28 (46%), Positives = 17/28 (60%) Frame = +1 Query: 91 TPPPLEGRRVPIPHHLPLLRHAAAPETP 174 +PPP E R PIP+ P + AAP +P Sbjct: 565 SPPPAEANRAPIPNQQPQVNGNAAPASP 592
>HRG_RABIT (Q28640) Histidine-rich glycoprotein precursor| (Histidine-proline-rich glycoprotein) (HPRG) (Fragment) Length = 526 Score = 32.0 bits (71), Expect = 0.68 Identities = 25/72 (34%), Positives = 27/72 (37%), Gaps = 4/72 (5%) Frame = +1 Query: 10 HGASRRRERHLPPPPGHCRRRHLRHSYTP--PPLEGR--RVPIPHHLPLLRHAAAPETPD 177 HG R H PPP GH H + P PP G P PH P H D Sbjct: 356 HGPPPRHPPHGPPPHGHPPHGPPPHGHPPHGPPPHGHPPHGPPPHGHPPHGHG----FHD 411 Query: 178 HGASAPTSTVQG 213 HG P S +G Sbjct: 412 HGPCDPPSHKEG 423 Score = 30.4 bits (67), Expect = 2.0 Identities = 23/66 (34%), Positives = 24/66 (36%), Gaps = 2/66 (3%) Frame = +1 Query: 37 HLPPPPGHCRRRHLRHSYTPPPLEGRRV--PIPHHLPLLRHAAAPETPDHGASAPTSTVQ 210 H PPP GH H + PPP G P PH P H P P HG Sbjct: 326 HRPPPHGH-------HPHGPPP-HGHHPHGPPPHGHP--PHGPPPRHPPHGPPPHGHPPH 375 Query: 211 GGRPGG 228 G P G Sbjct: 376 GPPPHG 381
>EXTN_TOBAC (P13983) Extensin precursor (Cell wall hydroxyproline-rich| glycoprotein) Length = 620 Score = 31.6 bits (70), Expect = 0.89 Identities = 23/80 (28%), Positives = 32/80 (40%), Gaps = 9/80 (11%) Frame = +1 Query: 10 HGASRRRERHLPP----PPGHCRRRH-LRHSYTPPPLEGRRVPIPHHLPLLR----HAAA 162 HG + H PP PP H R RH + PPP + P P + P + + Sbjct: 146 HGHAPPSGGHTPPRGQHPPSHRRPSPPSRHGHPPPPTYAQPPPTPIYSPSPQVQPPPTYS 205 Query: 163 PETPDHGASAPTSTVQGGRP 222 P P H P+ +G +P Sbjct: 206 PPPPTHVQPTPSPPSRGHQP 225 Score = 31.2 bits (69), Expect = 1.2 Identities = 20/53 (37%), Positives = 23/53 (43%), Gaps = 1/53 (1%) Frame = +1 Query: 43 PPPPGHCRRRHLRHSY-TPPPLEGRRVPIPHHLPLLRHAAAPETPDHGASAPT 198 PPP H SY PPP G P HLP H P +P HG + P+ Sbjct: 107 PPPSPVISPSHPPPSYGAPPPSHG-----PGHLP--SHGQRPPSPSHGHAPPS 152
>PP1RA_XENLA (Q6GLQ4) Serine/threonine-protein phosphatase 1 regulatory subunit| 10 Length = 819 Score = 31.6 bits (70), Expect = 0.89 Identities = 23/81 (28%), Positives = 33/81 (40%), Gaps = 4/81 (4%) Frame = +1 Query: 4 HLHGASRRRERHLPPP--PGHCRRRHLRHSYTPPPLEGRRVPIPHHLPLLRHAAAPETPD 177 HL G+ + + ++ PP G + + + PP + + P PHH P H P Sbjct: 605 HLLGSLQNQNQNQGPPGPAGQGSQGPVNIGFPPPSQKNHQPPPPHHQPPPPHYPPP---- 660 Query: 178 HGASAPTSTVQG--GRPGGER 234 P QG G PGG R Sbjct: 661 ----GPNGPFQGPHGPPGGPR 677
>BRD4_MOUSE (Q9ESU6) Bromodomain-containing protein 4 (Mitotic| chromosome-associated protein) (MCAP) Length = 1400 Score = 31.6 bits (70), Expect = 0.89 Identities = 18/47 (38%), Positives = 21/47 (44%), Gaps = 1/47 (2%) Frame = +1 Query: 37 HLPPPPGHCRRRHL-RHSYTPPPLEGRRVPIPHHLPLLRHAAAPETP 174 HLP PP H HL +H+ PP +P P R AA P P Sbjct: 840 HLPQPPEHSTPPHLNQHAVVSPPALHNALPQQPSRPSNRAAALPPKP 886
>BRD4_HUMAN (O60885) Bromodomain-containing protein 4 (HUNK1 protein)| Length = 1362 Score = 31.6 bits (70), Expect = 0.89 Identities = 18/47 (38%), Positives = 21/47 (44%), Gaps = 1/47 (2%) Frame = +1 Query: 37 HLPPPPGHCRRRHL-RHSYTPPPLEGRRVPIPHHLPLLRHAAAPETP 174 HLP PP H HL +H+ PP +P P R AA P P Sbjct: 838 HLPQPPEHSTPPHLNQHAVVSPPALHNALPQQPSRPSNRAAALPPKP 884
>EXTN_DAUCA (P06599) Extensin precursor| Length = 306 Score = 31.6 bits (70), Expect = 0.89 Identities = 19/65 (29%), Positives = 21/65 (32%), Gaps = 11/65 (16%) Frame = +1 Query: 37 HLPPPPGHCRRRHLRHSYTPPPLEGRRVPIP-----------HHLPLLRHAAAPETPDHG 183 H PPPP H + PPP P P H P H +P P H Sbjct: 44 HSPPPPEHSPPPPYHYESPPPPKHSPPPPTPVYKYKSPPPPMHSPPPPYHFESPPPPKHS 103 Query: 184 ASAPT 198 PT Sbjct: 104 PPPPT 108 Score = 29.3 bits (64), Expect = 4.4 Identities = 17/54 (31%), Positives = 23/54 (42%), Gaps = 3/54 (5%) Frame = +1 Query: 43 PPPPGH--CRRRHLRHSYTPPPLEGRRVPIP-HHLPLLRHAAAPETPDHGASAP 195 PPPP H H ++ PPP + P P HH + P TP + +P Sbjct: 146 PPPPKHSPAPEHHYKYKSPPPP---KHFPAPEHHYKYKYKSPPPPTPVYKYKSP 196 Score = 28.5 bits (62), Expect = 7.6 Identities = 17/62 (27%), Positives = 24/62 (38%), Gaps = 2/62 (3%) Frame = +1 Query: 43 PPPPGHCRR--RHLRHSYTPPPLEGRRVPIPHHLPLLRHAAAPETPDHGASAPTSTVQGG 216 PPPP H H ++ PPP P+ P H+ P TP + +P + Sbjct: 208 PPPPKHSPAPVHHYKYKSPPPP-----TPVYKSPPPPEHSPPPPTPVYKYKSPPPPMHSP 262 Query: 217 RP 222 P Sbjct: 263 PP 264
>HXA4_CHICK (P17277) Homeobox protein Hox-A4 (Chox-1.4)| Length = 309 Score = 26.6 bits (57), Expect(2) = 1.0 Identities = 17/46 (36%), Positives = 19/46 (41%) Frame = +1 Query: 37 HLPPPPGHCRRRHLRHSYTPPPLEGRRVPIPHHLPLLRHAAAPETP 174 H PPPP HL H+ P P P P P + AAP P Sbjct: 44 HAPPPPPPPPPPHL-HAAHPGPALPEYFPRPRREPGYQAPAAPPGP 88 Score = 23.5 bits (49), Expect(2) = 1.0 Identities = 11/24 (45%), Positives = 11/24 (45%) Frame = +1 Query: 154 AAAPETPDHGASAPTSTVQGGRPG 225 A PE P GAS P G PG Sbjct: 118 APGPEQPPPGASPPPPPPAKGHPG 141
>SRRM1_CHICK (Q5ZMJ9) Serine/arginine repetitive matrix protein 1| Length = 888 Score = 31.2 bits (69), Expect = 1.2 Identities = 19/54 (35%), Positives = 24/54 (44%), Gaps = 1/54 (1%) Frame = +1 Query: 16 ASRRRERHLPPPPGHCRRRHLRHSYTPPPLEGRRVPIP-HHLPLLRHAAAPETP 174 A RRR PPPP R L +P P RR P P + P ++ +P P Sbjct: 549 ARRRRSPSPPPPPRRRRSPSLPRRRSPSPPPRRRSPSPRRYSPPIQRRYSPSPP 602 Score = 30.0 bits (66), Expect = 2.6 Identities = 20/57 (35%), Positives = 24/57 (42%) Frame = +1 Query: 25 RRERHLPPPPGHCRRRHLRHSYTPPPLEGRRVPIPHHLPLLRHAAAPETPDHGASAP 195 R+ R L P RRRH PP + RR P P R + +P ASAP Sbjct: 380 RKTRRLSPSASPPRRRHRPSPPASPPPKPRRSPTPQQSNRARKSRGSVSPGR-ASAP 435 Score = 29.3 bits (64), Expect = 4.4 Identities = 21/67 (31%), Positives = 26/67 (38%), Gaps = 6/67 (8%) Frame = +1 Query: 13 GASRRRERHLPPPPGHCRR------RHLRHSYTPPPLEGRRVPIPHHLPLLRHAAAPETP 174 G RR P P +R R R S +PPP RR P P P R +P P Sbjct: 513 GRRRRHSHSRSPSPSPRKRQKEPSPRRRRRSPSPPPARRRRSPSPPPPP--RRRRSPSLP 570 Query: 175 DHGASAP 195 + +P Sbjct: 571 RRRSPSP 577
>RCO1_NEUCR (P78706) Transcriptional repressor rco-1| Length = 604 Score = 30.8 bits (68), Expect = 1.5 Identities = 18/68 (26%), Positives = 27/68 (39%), Gaps = 3/68 (4%) Frame = +1 Query: 40 LPPPPGHCRRRHLRHSYTPPPLEGRRVPIP---HHLPLLRHAAAPETPDHGASAPTSTVQ 210 +PPPP ++ H PP L+G P P P + P+ P + P + Sbjct: 129 VPPPPPPQQQEQPAHMPAPPGLQGPPPPPPPPSQQPPFQQQYQGPQGPGNFPPQPPQSTA 188 Query: 211 GGRPGGER 234 P G+R Sbjct: 189 SPGPAGKR 196
>EXTN1_ARATH (Q38913) Extensin-1 precursor (AtExt1) (AtExt4)| Length = 373 Score = 30.8 bits (68), Expect = 1.5 Identities = 19/65 (29%), Positives = 26/65 (40%), Gaps = 3/65 (4%) Frame = +1 Query: 37 HLPPPPGHCRRRHLRHSYTPPPLEGRRVPIPHHL---PLLRHAAAPETPDHGASAPTSTV 207 H PPPP H Y+PPP+ P P H P++ H+ P + +P V Sbjct: 288 HSPPPPVH---------YSPPPVVYHSPPPPVHYSPPPVVYHSPPPPKKHYEYKSPPPPV 338 Query: 208 QGGRP 222 P Sbjct: 339 HYSPP 343 Score = 29.6 bits (65), Expect = 3.4 Identities = 19/56 (33%), Positives = 25/56 (44%), Gaps = 3/56 (5%) Frame = +1 Query: 37 HLPPPPGHCRRRHLRHSYTPPPLEGRRVPIPHHL---PLLRHAAAPETPDHGASAP 195 H PPPP H Y+PPP+ P P H P++ H +P P H + P Sbjct: 272 HSPPPPVH---------YSPPPVVYHSPPPPVHYSPPPVVYH--SPPPPVHYSPPP 316 Score = 29.6 bits (65), Expect = 3.4 Identities = 19/56 (33%), Positives = 25/56 (44%), Gaps = 3/56 (5%) Frame = +1 Query: 37 HLPPPPGHCRRRHLRHSYTPPPLEGRRVPIPHHL---PLLRHAAAPETPDHGASAP 195 H PPPP H Y+PPP+ P P H P++ H +P P H + P Sbjct: 256 HSPPPPVH---------YSPPPVVYHSPPPPVHYSPPPVVYH--SPPPPVHYSPPP 300
>UMP1_ARATH (Q9LKA5) Unknown mitochondrial protein At3g15000| Length = 395 Score = 30.8 bits (68), Expect = 1.5 Identities = 20/66 (30%), Positives = 26/66 (39%), Gaps = 6/66 (9%) Frame = +1 Query: 43 PPPPGHCRRRHLRHSYTPPPLEGRRVPIPHHL------PLLRHAAAPETPDHGASAPTST 204 PPPP H+ S PPP G P P H+ P + P P + P + Sbjct: 252 PPPP------HIGGSAPPPPHMGGSAPPPPHMGQNYGPPPPNNMGGPRHPPPYGAPPQNN 305 Query: 205 VQGGRP 222 + G RP Sbjct: 306 MGGPRP 311
>WASF3_HUMAN (Q9UPY6) Wiskott-Aldrich syndrome protein family member 3| (WASP-family protein member 3) (WAVE-3 protein) (Verprolin homology domain-containing protein 3) Length = 502 Score = 30.8 bits (68), Expect = 1.5 Identities = 22/74 (29%), Positives = 26/74 (35%), Gaps = 1/74 (1%) Frame = +1 Query: 10 HG-ASRRRERHLPPPPGHCRRRHLRHSYTPPPLEGRRVPIPHHLPLLRHAAAPETPDHGA 186 HG AS+ E PP R L PPP P P P A+AP P Sbjct: 275 HGPASQAAEHEYRPPSASARHMALNRPQQPPP------PPPPQAPEGSQASAPMAPADYG 328 Query: 187 SAPTSTVQGGRPGG 228 P ++ P G Sbjct: 329 MLPAQIIEYYNPSG 342
>POLN_RUBVM (Q86500) Nonstructural polyprotein [Contains: Protease (EC| 3.4.22.-) (p150); RNA-directed RNA polymerase/helicase (EC 2.7.7.48) (EC 3.6.1.-) (p90)] Length = 2115 Score = 30.8 bits (68), Expect = 1.5 Identities = 21/58 (36%), Positives = 23/58 (39%), Gaps = 2/58 (3%) Frame = +1 Query: 43 PPPPGHCRR--RHLRHSYTPPPLEGRRVPIPHHLPLLRHAAAPETPDHGASAPTSTVQ 210 PPPP RR RH TPPP R P P P P P G P +T + Sbjct: 727 PPPPRRARRSQRHSDARGTPPPAPVRDPPRPQPSP-------PAPPRVGDPVPPTTAE 777
>LNK_HUMAN (Q9UQQ2) Lymphocyte-specific adapter protein Lnk (Signal| transduction protein Lnk) (Lymphocyte adapter protein) Length = 575 Score = 30.8 bits (68), Expect = 1.5 Identities = 27/74 (36%), Positives = 29/74 (39%), Gaps = 5/74 (6%) Frame = +1 Query: 19 SRRRERHLPP-PPGHCR----RRHLRHSYTPPPLEGRRVPIPHHLPLLRHAAAPETPDHG 183 +R E PP PPG C RR LRH + R LP AAAP TP Sbjct: 118 ARSSEELAPPRPPGPCSFQHFRRSLRHIF--------RRRSAGELPAAHTAAAPGTPGEA 169 Query: 184 ASAPTSTVQGGRPG 225 A P RPG Sbjct: 170 AETP------ARPG 177
>CD2_MACFA (Q6SZ61) T-cell surface antigen CD2 precursor| Length = 351 Score = 30.0 bits (66), Expect = 2.6 Identities = 26/68 (38%), Positives = 28/68 (41%), Gaps = 3/68 (4%) Frame = +1 Query: 34 RHLPPPPGHCRRRHLRHSYTPPPLEGRRVPIPHHLPLLRHAAAPETPDH---GASAPTST 204 +H PPPPGH R + H PP G RV H P R A T H G P Sbjct: 280 QHPPPPPGH-RSQAPSHRPLPP---GHRV---QHQPQKRPPAPSGTQVHQQKGPPLPRPR 332 Query: 205 VQGGRPGG 228 VQ P G Sbjct: 333 VQPKPPQG 340
>EMBB_MYCTU (P72030) Probable arabinosyltransferase B (EC 2.4.2.-)| Length = 1098 Score = 30.0 bits (66), Expect = 2.6 Identities = 13/29 (44%), Positives = 15/29 (51%) Frame = -3 Query: 339 DWDWDSPAAGNSPAFQCLWRPLPSGSSPA 253 D+DWD+P SP PLP G PA Sbjct: 812 DYDWDAPTKLTSPGINGSTVPLPYGLDPA 840
>EMBB_MYCBO (Q7TVN3) Probable arabinosyltransferase B (EC 2.4.2.-)| Length = 1098 Score = 30.0 bits (66), Expect = 2.6 Identities = 13/29 (44%), Positives = 15/29 (51%) Frame = -3 Query: 339 DWDWDSPAAGNSPAFQCLWRPLPSGSSPA 253 D+DWD+P SP PLP G PA Sbjct: 812 DYDWDAPTKLTSPGINGSTVPLPYGLDPA 840
>SAS_DROME (Q04164) Putative epidermal cell surface receptor precursor (Stranded| at second protein) Length = 1693 Score = 30.0 bits (66), Expect = 2.6 Identities = 13/47 (27%), Positives = 21/47 (44%) Frame = +1 Query: 43 PPPPGHCRRRHLRHSYTPPPLEGRRVPIPHHLPLLRHAAAPETPDHG 183 PPPP H + + L P + + H++P++ P P HG Sbjct: 1154 PPPPPHQQHQSLTPQLHPQQQQISQQHPGHYVPIVHSGVPPPPPGHG 1200
>RERE_HUMAN (Q9P2R6) Arginine-glutamic acid dipeptide repeats protein| (Atrophin-1-like protein) (Atrophin-1-related protein) Length = 1566 Score = 30.0 bits (66), Expect = 2.6 Identities = 19/51 (37%), Positives = 23/51 (45%), Gaps = 3/51 (5%) Frame = +1 Query: 85 SYTPPPLEGRRVPIPHHL---PLLRHAAAPETPDHGASAPTSTVQGGRPGG 228 S+ PPL G+ P PH L PLL+H P+ P QG P G Sbjct: 840 SHAQPPLHGQGPPGPHSLQAGPLLQHPGPPQP----FGLPPQASQGQAPLG 886
>OSA_DROME (Q8IN94) Trithorax group protein osa (Protein eyelid)| Length = 2716 Score = 30.0 bits (66), Expect = 2.6 Identities = 16/60 (26%), Positives = 27/60 (45%) Frame = +1 Query: 1 LHLHGASRRRERHLPPPPGHCRRRHLRHSYTPPPLEGRRVPIPHHLPLLRHAAAPETPDH 180 +H H +++++H PPP H +++ PPP G P H P ++ P H Sbjct: 91 MHYHHLHQQQQQH--PPPPHMQQQQHHGGPAPPPPGG----APEHAPGVKEEYTHLPPPH 144
>FOXL2_HUMAN (P58012) Forkhead box protein L2| Length = 376 Score = 30.0 bits (66), Expect = 2.6 Identities = 18/37 (48%), Positives = 19/37 (51%), Gaps = 3/37 (8%) Frame = +1 Query: 94 PPPLEGRRVPIPHHLPLLRHAAA---PETPDHGASAP 195 PPP P HHL HAAA P P HGA+AP Sbjct: 285 PPPPHPHPHPHAHHL----HAAAAPPPAPPHHGAAAP 317 Score = 28.9 bits (63), Expect = 5.8 Identities = 22/59 (37%), Positives = 24/59 (40%), Gaps = 6/59 (10%) Frame = +1 Query: 43 PPPPG---HCRRRHLRHSYTPPPL---EGRRVPIPHHLPLLRHAAAPETPDHGASAPTS 201 PPPP H HL + PPP G P P L A+P T A APTS Sbjct: 285 PPPPHPHPHPHAHHLHAAAAPPPAPPHHGAAAPPPGQL----SPASPATAAPPAPAPTS 339
>SNPC2_HUMAN (Q13487) snRNA-activating protein complex subunit 2 (SNAPc subunit| 2) (snRNA-activating protein complex 45 kDa subunit) (SNAPc 45 kDa subunit) (Small nuclear RNA-activating complex polypeptide 2) (Proximal sequence element-binding transcripti Length = 334 Score = 30.0 bits (66), Expect = 2.6 Identities = 17/53 (32%), Positives = 24/53 (45%) Frame = +1 Query: 76 LRHSYTPPPLEGRRVPIPHHLPLLRHAAAPETPDHGASAPTSTVQGGRPGGER 234 L HS P P + R P+ P + APE P +AP+S + P E+ Sbjct: 136 LLHSKPPKPTQARGKPLLLSAPGGQEDPAPEIPSSAPAAPSSAPRTPDPAPEK 188
>CEBPA_HUMAN (P49715) CCAAT/enhancer-binding protein alpha (C/EBP alpha)| Length = 358 Score = 29.6 bits (65), Expect = 3.4 Identities = 25/84 (29%), Positives = 28/84 (33%), Gaps = 19/84 (22%) Frame = +1 Query: 37 HLPPPPGHCRRRHLRHSY---------------TPPPLEGRRVPIPHHLPLLRHAAAP-- 165 H PPP H HL+ TPPP VP PH P L A P Sbjct: 193 HPHPPPAHLAAPHLQFQIAHCGQTTMHLQPGHPTPPPTP---VPSPHPAPALGAAGLPGP 249 Query: 166 --ETPDHGASAPTSTVQGGRPGGE 231 GA+ P GG G+ Sbjct: 250 GSALKGLGAAHPDLRASGGTGAGK 273
>PO121_RAT (P52591) Nuclear envelope pore membrane protein POM 121 (Pore| membrane protein of 121 kDa) (P145) Length = 1199 Score = 29.6 bits (65), Expect = 3.4 Identities = 27/89 (30%), Positives = 32/89 (35%), Gaps = 11/89 (12%) Frame = +1 Query: 1 LHLHGASRRRERHLPPPPGHCRRRHLRHSYTPPPLEGRRVP---IPHHLPLLRHAAAPET 171 LHL G +R RH GH PL VP +P L R A+ + Sbjct: 305 LHLDGQENKRRRHDSSGSGHSAFE---------PLVANGVPAAFVPKPGSLKRSLASQSS 355 Query: 172 PDH--------GASAPTSTVQGGRPGGER 234 DH S+ TST GG P R Sbjct: 356 DDHLNKRSRTSSVSSLTSTCTGGIPSSSR 384
>NCOA6_MOUSE (Q9JL19) Nuclear receptor coactivator 6 (Amplified in breast cancer| protein 3) (Cancer-amplified transcriptional coactivator ASC-2) (Activating signal cointegrator 2) (ASC-2) (Peroxisome proliferator-activated receptor-interacting protein) (P Length = 2067 Score = 29.6 bits (65), Expect = 3.4 Identities = 13/33 (39%), Positives = 22/33 (66%), Gaps = 1/33 (3%) Frame = +1 Query: 127 PHHLPL-LRHAAAPETPDHGASAPTSTVQGGRP 222 P H+P ++ ++AP TP+ +S+P +Q GRP Sbjct: 1702 PLHIPQNIKFSSAPVTPNVPSSSPAPNIQTGRP 1734
>VGF_RAT (P20156) Neurosecretory protein VGF precursor (VGF8a protein)| Length = 617 Score = 29.3 bits (64), Expect = 4.4 Identities = 15/44 (34%), Positives = 18/44 (40%) Frame = +1 Query: 22 RRRERHLPPPPGHCRRRHLRHSYTPPPLEGRRVPIPHHLPLLRH 153 R + PP P H ++R PP RR H LP RH Sbjct: 534 REEDEVFPPGPYHPFPNYIRPRTLQPPASSRRRHFHHALPPARH 577
>BSN_HUMAN (Q9UPA5) Bassoon protein (Zinc-finger protein 231)| Length = 3925 Score = 29.3 bits (64), Expect = 4.4 Identities = 24/69 (34%), Positives = 27/69 (39%) Frame = +1 Query: 16 ASRRRERHLPPPPGHCRRRHLRHSYTPPPLEGRRVPIPHHLPLLRHAAAPETPDHGASAP 195 AS + RH G R RH+ P GRR PH L RH A P + A A Sbjct: 3639 ASAKEHRH-----GDHGRHSGRHTGEEP---GRRAAKPHARDLGRHEARPHSQPSSAPAM 3690 Query: 196 TSTVQGGRP 222 Q G P Sbjct: 3691 PKKGQPGYP 3699
>NCKX1_RAT (Q9QZM6) Sodium/potassium/calcium exchanger 1| (Na(+)/K(+)/Ca(2+)-exchange protein 1) (Retinal rod Na-Ca+K exchanger) Length = 1181 Score = 29.3 bits (64), Expect = 4.4 Identities = 21/73 (28%), Positives = 30/73 (41%), Gaps = 11/73 (15%) Frame = +1 Query: 19 SRRRERHLPPPPGHCRRRHLR-------HSYTPPPLEGRRVPIPHHLPLLRHAAAPETPD 177 +RR++ ++PP P + SYTP P GR+ P H R TP Sbjct: 136 TRRQKENIPPTPSRAPSHFISTSGRQRVKSYTPKPRGGRKSSSPTH---TREEGRMHTPS 192 Query: 178 HGAS----APTST 204 + +PTST Sbjct: 193 PAGAPRTISPTST 205
>BARH1_DROME (Q24255) Homeobox protein B-H1 (Homeobox protein BarH1)| Length = 544 Score = 29.3 bits (64), Expect = 4.4 Identities = 18/51 (35%), Positives = 23/51 (45%), Gaps = 2/51 (3%) Frame = +1 Query: 82 HSYTPPPLEGRRVPIPHHL--PLLRHAAAPETPDHGASAPTSTVQGGRPGG 228 H PPP G P P L P+ H+A+ P S P+ T+ G P G Sbjct: 478 HPVAPPPSVGGGSP-PSGLVKPIPAHSASASPPPRPPSTPSPTLNPGSPPG 527
>WASIP_MOUSE (Q8K1I7) Wiskott-Aldrich syndrome protein-interacting protein| (WASP-interacting protein) Length = 493 Score = 29.3 bits (64), Expect = 4.4 Identities = 18/61 (29%), Positives = 24/61 (39%) Frame = +1 Query: 43 PPPPGHCRRRHLRHSYTPPPLEGRRVPIPHHLPLLRHAAAPETPDHGASAPTSTVQGGRP 222 PPPP R R + PPP + + P+P + P G+ AP RP Sbjct: 259 PPPPVGNRPSMHREAVPPPPSQTSKPPVP----------STPRPGLGSQAPPPPPPPSRP 308 Query: 223 G 225 G Sbjct: 309 G 309
>VNUA_PRVKA (P33485) Probable nuclear antigen| Length = 1733 Score = 28.9 bits (63), Expect = 5.8 Identities = 26/78 (33%), Positives = 31/78 (39%), Gaps = 4/78 (5%) Frame = +1 Query: 13 GASRRRERHLPPPPGHCRRRHLRHSYTPPPLEGRRVPIPHHLPLLRHAAAPE----TPDH 180 G +RRE PG R R L G+RV HH +L P + Sbjct: 743 GGEQRREAAAARVPG--RARGALGGLGAELLVGQRVVEHHHAHVLGVGYLPHPGGAAAER 800 Query: 181 GASAPTSTVQGGRPGGER 234 GA+A QGGR GER Sbjct: 801 GAAARGDVRQGGRVEGER 818
>CD2_MOUSE (P08920) T-cell surface antigen CD2 precursor (T-cell surface| antigen T11/Leu-5) (LFA-2) (LFA-3 receptor) (Lymphocyte antigen Ly-37) Length = 344 Score = 28.9 bits (63), Expect = 5.8 Identities = 16/46 (34%), Positives = 20/46 (43%) Frame = +1 Query: 37 HLPPPPGHCRRRHLRHSYTPPPLEGRRVPIPHHLPLLRHAAAPETP 174 H P PPGH R H + PP G ++ PL R P+ P Sbjct: 288 HRPLPPGHRTREHQQKKRPPP--SGTQIHQQKGPPLPRPRVQPKPP 331
>PIWL3_HUMAN (Q7Z3Z3) Piwi-like protein 3| Length = 882 Score = 28.9 bits (63), Expect = 5.8 Identities = 20/73 (27%), Positives = 29/73 (39%) Frame = +1 Query: 13 GASRRRERHLPPPPGHCRRRHLRHSYTPPPLEGRRVPIPHHLPLLRHAAAPETPDHGASA 192 G +RRRE + PG R + PP L+ P+ +P++R P GA Sbjct: 11 GRARRRESYQQEAPGGPRAPGSATTQEPPQLQSTPRPLQEEVPVVR-PLQPRAARGGAGG 69 Query: 193 PTSTVQGGRPGGE 231 + PG E Sbjct: 70 GAQSQGVKEPGPE 82
>IRS1_XENTR (Q6P4Y6) Insulin receptor substrate 1 (IRS-1)| Length = 654 Score = 28.9 bits (63), Expect = 5.8 Identities = 18/57 (31%), Positives = 22/57 (38%) Frame = +1 Query: 34 RHLPPPPGHCRRRHLRHSYTPPPLEGRRVPIPHHLPLLRHAAAPETPDHGASAPTST 204 RH P PP + R S P+E VP PH L +PE + A T Sbjct: 250 RHHPNPPPPSQVGISRRSRAETPIENSPVPKPHSLSKDYSVQSPEEEEEEKGARVET 306
>LASP1_RABIT (O77506) LIM and SH3 domain protein 1 (LASP-1) (40 kDa| phosphoprotein) (pp40) Length = 263 Score = 28.9 bits (63), Expect = 5.8 Identities = 21/56 (37%), Positives = 26/56 (46%), Gaps = 8/56 (14%) Frame = +1 Query: 85 SYTPPPLEGRRVPIPHHLPLLRHAAAPETPDHGA--------SAPTSTVQGGRPGG 228 +Y PP E ++ P PHH+P A P A +AP ST Q G PGG Sbjct: 151 NYRRPP-EQQQPPQPHHIPTSTPAYQQPQPQQVAQSYGYKEPAAPVST-QRGAPGG 204
>TR2M_AGRRH (Q09109) Tryptophan 2-monooxygenase (EC 1.13.12.3)| Length = 749 Score = 28.9 bits (63), Expect = 5.8 Identities = 14/26 (53%), Positives = 17/26 (65%), Gaps = 2/26 (7%) Frame = +2 Query: 230 RGRQRHWKAGEDPEGRGRQRH--WKA 301 RGRQ WKAGE+P R+ H W+A Sbjct: 316 RGRQYIWKAGEEPPELFRRVHHGWRA 341
>CSKI2_MOUSE (Q8VHK1) Caskin-2| Length = 1201 Score = 28.9 bits (63), Expect = 5.8 Identities = 23/66 (34%), Positives = 26/66 (39%), Gaps = 5/66 (7%) Frame = +1 Query: 25 RRERHLPPPPGHCRRRHLRHSYTPPPLEGRRVPI-----PHHLPLLRHAAAPETPDHGAS 189 R R PPPP R + S PP L+G P P L E+P G S Sbjct: 859 RARRKGPPPPPPKRLSSVSGSTEPPSLDGTSGPKEGATGPRRRTLSEPTGPSESP--GPS 916 Query: 190 APTSTV 207 APT V Sbjct: 917 APTGPV 922
>POLN_RUBVT (P13889) Nonstructural polyprotein [Contains: Protease (EC| 3.4.22.-) (p150); RNA-directed RNA polymerase/helicase (EC 2.7.7.48) (EC 3.6.1.-) (p90)] Length = 2115 Score = 28.9 bits (63), Expect = 5.8 Identities = 16/35 (45%), Positives = 16/35 (45%), Gaps = 2/35 (5%) Frame = +1 Query: 43 PPPPGHCRR--RHLRHSYTPPPLEGRRVPIPHHLP 141 PPPP RR RH TPPP R P P P Sbjct: 726 PPPPRRARRSQRHSDARGTPPPAPARDPPPPAPSP 760
>GLT3_WHEAT (P08488) Glutenin, high molecular weight subunit 12 precursor| Length = 660 Score = 28.5 bits (62), Expect = 7.6 Identities = 10/27 (37%), Positives = 18/27 (66%) Frame = +2 Query: 227 GRGRQRHWKAGEDPEGRGRQRHWKAGE 307 G+G+Q H+ A + G+G+Q H+ A + Sbjct: 315 GQGQQGHYPASQQQPGQGQQGHYPASQ 341
>GLT0_WHEAT (P10387) Glutenin, high molecular weight subunit DY10 precursor| Length = 648 Score = 28.5 bits (62), Expect = 7.6 Identities = 10/27 (37%), Positives = 18/27 (66%) Frame = +2 Query: 227 GRGRQRHWKAGEDPEGRGRQRHWKAGE 307 G+G+Q H+ A + G+G+Q H+ A + Sbjct: 303 GQGQQGHYPASQQQPGQGQQGHYPASQ 329 Score = 28.5 bits (62), Expect = 7.6 Identities = 10/27 (37%), Positives = 18/27 (66%) Frame = +2 Query: 227 GRGRQRHWKAGEDPEGRGRQRHWKAGE 307 G+G+Q H+ A + G+G+Q H+ A + Sbjct: 288 GQGQQGHYPASQQQPGQGQQGHYPASQ 314 Score = 28.1 bits (61), Expect = 9.9 Identities = 10/27 (37%), Positives = 18/27 (66%) Frame = +2 Query: 227 GRGRQRHWKAGEDPEGRGRQRHWKAGE 307 G+G+Q H+ A + G+G+Q H+ A + Sbjct: 273 GQGQQGHYLASQQQPGQGQQGHYPASQ 299
>EXTN3_ARATH (Q9FS16) Extensin-3 precursor (AtExt3) (AtExt5)| Length = 427 Score = 28.5 bits (62), Expect = 7.6 Identities = 12/35 (34%), Positives = 18/35 (51%) Frame = +1 Query: 37 HLPPPPGHCRRRHLRHSYTPPPLEGRRVPIPHHLP 141 H PPPP ++H + PPP++ P +H P Sbjct: 51 HSPPPP----KKHYEYKSPPPPVKHYSPPPVYHSP 81
>ACOX1_RAT (P07872) Acyl-coenzyme A oxidase 1, peroxisomal (EC 1.3.3.6)| (Palmitoyl-CoA oxidase) (AOX) [Contains: Acyl-CoA oxidase 1 peroxisomal, A chain; Acyl-CoA oxidase 1 peroxisomal, B chain; Acyl-CoA oxidase 1 peroxisomal, C chain] Length = 661 Score = 28.5 bits (62), Expect = 7.6 Identities = 13/24 (54%), Positives = 16/24 (66%) Frame = +2 Query: 29 ANATFRPHLVTAAADTSDTHTRRR 100 A+ATF P L+T D S +TRRR Sbjct: 10 ASATFNPELITHILDGSPENTRRR 33
>FOXD4_MOUSE (Q60688) Forkhead box protein D4 (Forkhead-related protein FKHL9)| (Forkhead-related transcription factor 5) (FREAC-5) (Transcription factor FKH-2) Length = 444 Score = 28.5 bits (62), Expect = 7.6 Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 2/62 (3%) Frame = +1 Query: 22 RRRERHLPPPPGHCRRRHLRHSYTPPPLEGRRVPIPHHLPLLRHAAAPE--TPDHGASAP 195 +R +RH PP GH H PPP + + LLR++A P+ H A+ P Sbjct: 197 KRFKRHHPPSGGH------PHCPFPPPAVPATLHVSQPSLLLRYSAPPQPNLAAHPAAPP 250 Query: 196 TS 201 S Sbjct: 251 RS 252
>CY43_TRYBB (Q99280) Receptor-type adenylate cyclase GRESAG 4.3 (EC 4.6.1.1)| (ATP pyrophosphate-lyase) (Adenylyl cyclase) Length = 1229 Score = 28.5 bits (62), Expect = 7.6 Identities = 21/60 (35%), Positives = 27/60 (45%) Frame = +1 Query: 37 HLPPPPGHCRRRHLRHSYTPPPLEGRRVPIPHHLPLLRHAAAPETPDHGASAPTSTVQGG 216 H+ P C H+ S PPL G V + H LLR + ET G S TS+ + G Sbjct: 455 HIMTTPLQC---HIDPSILRPPLTGLTVDMEDHEELLRGSTQFET---GVSTTTSSGKAG 508
>SFR15_RAT (Q63627) Splicing factor, arginine/serine-rich 15 (CTD-binding| SR-like protein RA4) (Fragment) Length = 1048 Score = 28.1 bits (61), Expect = 9.9 Identities = 18/61 (29%), Positives = 22/61 (36%) Frame = +1 Query: 37 HLPPPPGHCRRRHLRHSYTPPPLEGRRVPIPHHLPLLRHAAAPETPDHGASAPTSTVQGG 216 H PPPG + PP G + P P H P +R P G S + G Sbjct: 780 HRGPPPGP-------GGFAMPPPHGMKGPFPPHGPFVRPGGMPGLGGPGPGPGGSEDRDG 832 Query: 217 R 219 R Sbjct: 833 R 833
>HRG_HUMAN (P04196) Histidine-rich glycoprotein precursor| (Histidine-proline-rich glycoprotein) (HPRG) Length = 525 Score = 28.1 bits (61), Expect = 9.9 Identities = 16/44 (36%), Positives = 20/44 (45%) Frame = +1 Query: 46 PPPGHCRRRHLRHSYTPPPLEGRRVPIPHHLPLLRHAAAPETPD 177 PPPGH RRR P P R++ + LP LR P+ Sbjct: 433 PPPGHLRRR--GPGKGPRPFHCRQIGSVYRLPPLRKGEVLPLPE 474
>FOXB2_MOUSE (Q64733) Forkhead box protein B2 (Transcription factor FKH-4)| Length = 428 Score = 28.1 bits (61), Expect = 9.9 Identities = 21/70 (30%), Positives = 23/70 (32%), Gaps = 1/70 (1%) Frame = +1 Query: 4 HLHGASRRRERHLPPPPGHCRRRHLRHSYTPPPLEGRRVPIPHHLPLLRHAAAP-ETPDH 180 H H A+ H PP P PPP P PH +P AP P H Sbjct: 150 HHHHAAHHHHHHHPPQP-------------PPP------PPPHMVPYFHQQPAPAPQPPH 190 Query: 181 GASAPTSTVQ 210 S P Q Sbjct: 191 LPSQPAQQPQ 200
>CREB5_MOUSE (Q8K1L0) cAMP response element-binding protein 5 (CRE-BPa)| (Fragment) Length = 353 Score = 28.1 bits (61), Expect = 9.9 Identities = 23/93 (24%), Positives = 32/93 (34%), Gaps = 16/93 (17%) Frame = +1 Query: 4 HLHGASRRRERHLPPPPGHCRRRHLRHSYTPPPLEGRRVPIPH-----HLPLLRHAAAPE 168 HLH + + P P + +H H P P + P H H H +P Sbjct: 118 HLHSHPHQHQTLPPHHPYPHQHQHPAHHPHPQPHHQQNHPHHHSHSHLHAHPAHHQTSPH 177 Query: 169 TPDHGASA-----------PTSTVQGGRPGGER 234 P H + PT T+Q +P G R Sbjct: 178 PPLHTGNQAQVSPATQQMQPTQTIQPPQPTGGR 210
>CO5A1_MOUSE (O88207) Collagen alpha-1(V) chain precursor| Length = 1838 Score = 28.1 bits (61), Expect = 9.9 Identities = 18/43 (41%), Positives = 18/43 (41%), Gaps = 4/43 (9%) Frame = +1 Query: 88 YTPPPLE----GRRVPIPHHLPLLRHAAAPETPDHGASAPTST 204 YTPPP E G V P P PD GA PTST Sbjct: 345 YTPPPYEDFGYGEGVENPDQ---------PTNPDSGAEVPTST 378
>PSC_DROME (P35820) Polycomb group protein Psc (Protein posterior sex combs)| Length = 1601 Score = 28.1 bits (61), Expect = 9.9 Identities = 19/64 (29%), Positives = 25/64 (39%), Gaps = 8/64 (12%) Frame = +1 Query: 7 LHGASRRRERHLPPP--PGHCRRRHLRHSYTPPPLEGRRVPIPHHL------PLLRHAAA 162 + A ++R PP PGH + PPP + +P P HL P L A Sbjct: 1158 VQAAKEAQKRQSPPAAVPGHLAAK------LPPPPPSKAIPSPQHLVSRMTPPQLPKVAT 1211 Query: 163 PETP 174 P P Sbjct: 1212 PPPP 1215
>SUVH3_ARATH (Q9C5P4) Histone-lysine N-methyltransferase, H3 lysine-9 specific| SUVH3 (EC 2.1.1.43) (Histone H3-K9 methyltransferase 3) (H3-K9-HMTase 3) (Suppressor of variegation 3-9 homolog protein 3) (Su(var)3-9 homolog protein 3) (Protein SET DOMAIN GR Length = 669 Score = 28.1 bits (61), Expect = 9.9 Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 1/47 (2%) Frame = +1 Query: 91 TPPPLEGRRVPIPHHLPLLRHAAAPETPDHGASAPTSTVQG-GRPGG 228 TP + + PIP +P LR P T +G S+ + T +G GRP G Sbjct: 71 TPDLNQTQNTPIPSFVPPLRSYRTP-TKTNGPSSSSGTKRGVGRPKG 116
>CBLB_RAT (Q8K4S7) E3 ubiquitin-protein ligase CBL-B (EC 6.3.2.-) (Signal| transduction protein CBL-B) (SH3-binding protein CBL-B) (Casitas B-lineage lymphoma proto-oncogene b) Length = 938 Score = 28.1 bits (61), Expect = 9.9 Identities = 20/59 (33%), Positives = 25/59 (42%) Frame = +1 Query: 22 RRRERHLPPPPGHCRRRHLRHSYTPPPLEGRRVPIPHHLPLLRHAAAPETPDHGASAPT 198 R++++ LP PP R PPP R PIP L RH HG S P+ Sbjct: 538 RKQDKPLPAPPPPLR--------DPPPPPERPPPIPPDSRLSRHF------HHGESVPS 582
>PAR3L_HUMAN (Q8TEW8) Amyotrophic lateral sclerosis 2 chromosome region candidate| gene 19 protein (Partitioning-defective 3-like protein) (PAR3-L protein) (PAR3-beta) Length = 1205 Score = 28.1 bits (61), Expect = 9.9 Identities = 13/39 (33%), Positives = 18/39 (46%) Frame = +1 Query: 7 LHGASRRRERHLPPPPGHCRRRHLRHSYTPPPLEGRRVP 123 L A R +H PPPP + R P P + +R+P Sbjct: 1132 LRVADLRYPQHYPPPPAPQHKGPFRQDVPPSPPQHQRMP 1170
>DDEF1_HUMAN (Q9ULH1) 130-kDa phosphatidylinositol 4,5-biphosphate-dependent| ARF1 GTPase-activating protein (PIP2-dependent ARF1 GAP) (ADP-ribosylation factor-directed GTPase-activating protein 1) (ARF GTPase-activating protein 1) (Development and differe Length = 956 Score = 28.1 bits (61), Expect = 9.9 Identities = 19/59 (32%), Positives = 27/59 (45%) Frame = +1 Query: 28 RERHLPPPPGHCRRRHLRHSYTPPPLEGRRVPIPHHLPLLRHAAAPETPDHGASAPTST 204 ++R PPPPGH + + + PP P+PH P A P D G S+ + T Sbjct: 651 KKRPPPPPPGH------KRTLSDPP-----SPLPHGPP--NKGAVPWGNDGGPSSSSKT 696
>DDEF1_BOVIN (O97902) 130-kDa phosphatidylinositol 4,5-biphosphate-dependent| ARF1 GTPase-activating protein (PIP2-dependent ARF1 GAP) (ADP-ribosylation factor-directed GTPase-activating protein 1) (ARF GTPase-activating protein 1) (Development and differe Length = 1129 Score = 28.1 bits (61), Expect = 9.9 Identities = 19/59 (32%), Positives = 27/59 (45%) Frame = +1 Query: 28 RERHLPPPPGHCRRRHLRHSYTPPPLEGRRVPIPHHLPLLRHAAAPETPDHGASAPTST 204 ++R PPPPGH + + + PP P+PH P A P D G S+ + T Sbjct: 827 KKRSPPPPPGH------KRTLSDPP-----SPLPHGPP--NKGAVPWGNDVGPSSSSKT 872
>WASIP_HUMAN (O43516) Wiskott-Aldrich syndrome protein-interacting protein| (WASP-interacting protein) (PRPL-2 protein) Length = 503 Score = 28.1 bits (61), Expect = 9.9 Identities = 17/61 (27%), Positives = 23/61 (37%) Frame = +1 Query: 43 PPPPGHCRRRHLRHSYTPPPLEGRRVPIPHHLPLLRHAAAPETPDHGASAPTSTVQGGRP 222 PPPP R R + PPP + + P+P + P + AP RP Sbjct: 267 PPPPVGNRPSIHREAVPPPPPQNNKPPVP----------STPRPSASSQAPPPPPPPSRP 316 Query: 223 G 225 G Sbjct: 317 G 317
>ELL2_HUMAN (O00472) RNA polymerase II elongation factor ELL2| Length = 640 Score = 28.1 bits (61), Expect = 9.9 Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 1/59 (1%) Frame = +1 Query: 4 HLHGASRRRERHLPPPPGHCRRRHLRHSYTPPPLEGRRVPIPHHLPLLR-HAAAPETPD 177 HL+ S + LP PP TPPPL +PI H ++ ++ +P TP+ Sbjct: 351 HLNPTSEKSAAGLPLPPAAAAIP------TPPPLPSTYLPISHPPQIVNSNSNSPSTPE 403 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 35,893,237 Number of Sequences: 219361 Number of extensions: 683067 Number of successful extensions: 3065 Number of sequences better than 10.0: 61 Number of HSP's better than 10.0 without gapping: 2674 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3038 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2570413340 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
