ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart45d08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_475447.1| Oryza sativa (japonica cultivar-group), predic... 182 7e-43
2gb|AC118289.2| Oryza sativa (japonica cultivar-group) chromosome... 182 7e-43
3gb|AC093952.2| Oryza sativa (japonica cultivar-group) chromosome... 182 7e-43
4dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 182 7e-43
5ref|XM_848180.1| PREDICTED: Canis familiaris similar to kelch-li... 50 0.006
6ref|XM_522433.1| PREDICTED: Pan troglodytes similar to RAB13 pro... 44 0.40
7gb|BC028498.1| Mus musculus ubiquitin-like 5, mRNA (cDNA clone M... 44 0.40
8ref|NM_025401.2| Mus musculus ubiquitin-like 5 (Ubl5), mRNA 44 0.40
9gb|AF232689.2| Rat cytomegalovirus Maastricht, complete genome 44 0.40
10dbj|AK154036.1| Mus musculus 2 days neonate thymus thymic cells ... 44 0.40
11dbj|AK009854.1| Mus musculus adult male tongue cDNA, RIKEN full-... 44 0.40
12dbj|AK051149.1| Mus musculus 12 days embryo spinal ganglion cDNA... 44 0.40
13dbj|AK002730.1| Mus musculus adult male kidney cDNA, RIKEN full-... 44 0.40
14dbj|AK012803.1| Mus musculus 10, 11 days embryo whole body cDNA,... 44 0.40
15dbj|AK007726.1| Mus musculus 10 day old male pancreas cDNA, RIKE... 44 0.40
16dbj|AK003992.1| Mus musculus 18-day embryo whole body cDNA, RIKE... 44 0.40
17gb|AC034102.32| Homo sapiens 12 BAC RP11-603J24 (Roswell Park Ca... 44 0.40
18gb|AC164565.1| Mus musculus BAC clone RP23-99O13 from chromosome... 44 0.40
19gb|AC157087.2| Mus musculus BAC clone RP23-287O24 from chromosom... 42 1.6
20ref|XM_422674.1| PREDICTED: Gallus gallus tyrosine kinase RYK (R... 42 1.6
21emb|CR385823.1| Gallus gallus finished cDNA, clone ChEST69b5 42 1.6
22dbj|AK007525.1| Mus musculus 10 day old male pancreas cDNA, RIKE... 42 1.6
23dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
24dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete g... 42 1.6
25emb|CT573422.5| Mouse DNA sequence from clone RP24-76M8 on chrom... 42 1.6
26emb|AL135999.4|CNS01DVP Human chromosome 14 DNA sequence BAC R-6... 42 1.6
27gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.6
28emb|AL731879.5|CNS08C8K Oryza sativa chromosome 12, . BAC OSJNBb... 42 1.6
29emb|AL713947.3|CNS07YPQ Oryza sativa chromosome 12, . BAC OJ1003... 42 1.6
30gb|AE017221.1| Thermus thermophilus HB27, complete genome 42 1.6
31gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome 40 6.3
32ref|XM_519420.1| PREDICTED: Pan troglodytes similar to Thromboxa... 40 6.3
33ref|XM_866617.1| PREDICTED: Bos taurus similar to synaptotagmin ... 40 6.3
34ref|XM_883371.1| PREDICTED: Bos taurus hypothetical protein LOC6... 40 6.3
35gb|AC115884.9| Mus musculus chromosome 18, clone RP24-396H6, com... 40 6.3
36gb|AC147052.2| Pan troglodytes BAC clone RP43-143G1 from 7, comp... 40 6.3
37ref|XM_538477.2| PREDICTED: Canis familiaris similar to sine ocu... 40 6.3
38gb|BC014117.2| Homo sapiens thromboxane A synthase 1 (platelet, ... 40 6.3
39gb|AC146125.2| Pan troglodytes BAC clone RP43-4K13 from 7, compl... 40 6.3
40ref|NM_001061.2| Homo sapiens thromboxane A synthase 1 (platelet... 40 6.3
41emb|Z84207.1|TTZ84207 T.thermophilus rpsO gene and pnp gene 40 6.3
42emb|AL606706.3|OSJN00063 Oryza sativa genomic DNA, chromosome 4,... 40 6.3
43emb|AL606626.3|OSJN00050 Oryza sativa genomic DNA, chromosome 4,... 40 6.3
44dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, c... 40 6.3
45emb|CR625096.1| full-length cDNA clone CS0DI041YE16 of Placenta ... 40 6.3
46gb|AC015711.11| Homo sapiens, clone RP11-47G3, complete sequence 40 6.3
47gb|AC068181.9| Homo sapiens chromosome 15, clone RP11-673C5, com... 40 6.3
48gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, comple... 40 6.3
49gb|L36086.1|HSTBXA12 Homo sapiens thromboxane A2 synthase (TBXAS... 40 6.3
50gb|AC161874.3| Mus musculus BAC clone RP24-177G20 from chromosom... 40 6.3
51gb|AC154360.3| Mus musculus BAC clone RP23-167I5 from chromosome... 40 6.3
52gb|AF233624.1|AF233624 Homo sapiens thromboxane synthase (CYP5A1... 40 6.3
53gb|AF233623.1|AF233623 Homo sapiens thromboxane synthase (CYP5A1... 40 6.3
54gb|AF233622.1|AF233622 Homo sapiens thromboxane synthase (CYP5A1... 40 6.3
55gb|AF233621.1|AF233621 Homo sapiens thromboxane synthase (CYP5A1... 40 6.3
56gb|AF233620.1|AF233620 Homo sapiens thromboxane synthase (CYP5A1... 40 6.3
57gb|AF233619.1|AF233619 Homo sapiens thromboxane synthase (CYP5A1... 40 6.3
58gb|AF233618.1|AF233618 Homo sapiens thromboxane synthase (CYP5A1... 40 6.3
59gb|AF233617.1|AF233617 Homo sapiens thromboxane synthase (CYP5A1... 40 6.3
60gb|AF233616.1|AF233616 Homo sapiens thromboxane synthase (CYP5A1... 40 6.3
61gb|AF233615.1|AF233615 Homo sapiens thromboxane synthase (CYP5A1... 40 6.3
62dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
63dbj|D34625.2| Homo sapiens TBXAS1 gene for thromboxane synthase,... 40 6.3
64dbj|AK223466.1| Homo sapiens mRNA for thromboxane A synthase 1 (... 40 6.3
65gb|AF227920.1| Venturia inaequalis strain Ent27 14 alpha-demethy... 40 6.3
66gb|AF262757.1| Venturia inaequalis strain F445 14-a demethylase ... 40 6.3
67gb|AF262756.1| Venturia inaequalis strain Ent54 14-a demethylase... 40 6.3
68gb|AC004961.2|AC004961 Homo sapiens PAC clone RP5-1098J4 from 7,... 40 6.3
69dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome 40 6.3
70gb|BC041157.1| Homo sapiens thromboxane A synthase 1 (platelet, ... 40 6.3
71gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete... 40 6.3
72gb|AC148879.2| Chlamydomonas reinhardtii clone cr-36D8, complete... 40 6.3
73dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, comp... 40 6.3
74emb|AL732321.18| Mouse DNA sequence from clone RP23-167N17 on ch... 40 6.3
75gb|M80647.1|HUMTBSB Homo sapiens thromboxane synthase mRNA, comp... 40 6.3 
>ref|XM_475447.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1482

 Score =  182 bits (92), Expect = 7e-43
 Identities = 140/156 (89%)
 Strand = Plus / Plus

                                                                       
Query: 309 gaggaggagaaggaggcccacggcgtgcggatgatcgcgctgctcatggagtgcgcggtg 368
           ||||| ||| ||||||| |||||||||||||||||||||||||| ||||||||||||| |
Sbjct: 316 gaggatgaggaggaggctcacggcgtgcggatgatcgcgctgctgatggagtgcgcggcg 375

                                                                       
Query: 369 gccatgtcggtgggaaacctcgccgacgccaacgggacgctcctcgagctgtcgcagatg 428
           || ||||||||||| |||||||| | |||||||||| |||| ||||||||||||||||||
Sbjct: 376 gcgatgtcggtgggcaacctcgcgggcgccaacggggcgctgctcgagctgtcgcagatg 435

                                               
Query: 429 gcgtccccgtacgccccgtcctgcggcgagcggctc 464
           || || ||||||||  |||| |||||||||||||||
Sbjct: 436 gcctcgccgtacgcggcgtcgtgcggcgagcggctc 471
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>gb|AC118289.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0099O15,
              complete sequence
          Length = 137357

 Score =  182 bits (92), Expect = 7e-43
 Identities = 140/156 (89%)
 Strand = Plus / Plus

                                                                          
Query: 309    gaggaggagaaggaggcccacggcgtgcggatgatcgcgctgctcatggagtgcgcggtg 368
              ||||| ||| ||||||| |||||||||||||||||||||||||| ||||||||||||| |
Sbjct: 116593 gaggatgaggaggaggctcacggcgtgcggatgatcgcgctgctgatggagtgcgcggcg 116652

                                                                          
Query: 369    gccatgtcggtgggaaacctcgccgacgccaacgggacgctcctcgagctgtcgcagatg 428
              || ||||||||||| |||||||| | |||||||||| |||| ||||||||||||||||||
Sbjct: 116653 gcgatgtcggtgggcaacctcgcgggcgccaacggggcgctgctcgagctgtcgcagatg 116712

                                                  
Query: 429    gcgtccccgtacgccccgtcctgcggcgagcggctc 464
              || || ||||||||  |||| |||||||||||||||
Sbjct: 116713 gcctcgccgtacgcggcgtcgtgcggcgagcggctc 116748
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>gb|AC093952.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1004_E02,
            complete sequence
          Length = 127642

 Score =  182 bits (92), Expect = 7e-43
 Identities = 140/156 (89%)
 Strand = Plus / Plus

                                                                        
Query: 309  gaggaggagaaggaggcccacggcgtgcggatgatcgcgctgctcatggagtgcgcggtg 368
            ||||| ||| ||||||| |||||||||||||||||||||||||| ||||||||||||| |
Sbjct: 7513 gaggatgaggaggaggctcacggcgtgcggatgatcgcgctgctgatggagtgcgcggcg 7572

                                                                        
Query: 369  gccatgtcggtgggaaacctcgccgacgccaacgggacgctcctcgagctgtcgcagatg 428
            || ||||||||||| |||||||| | |||||||||| |||| ||||||||||||||||||
Sbjct: 7573 gcgatgtcggtgggcaacctcgcgggcgccaacggggcgctgctcgagctgtcgcagatg 7632

                                                
Query: 429  gcgtccccgtacgccccgtcctgcggcgagcggctc 464
            || || ||||||||  |||| |||||||||||||||
Sbjct: 7633 gcctcgccgtacgcggcgtcgtgcggcgagcggctc 7668
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  182 bits (92), Expect = 7e-43
 Identities = 140/156 (89%)
 Strand = Plus / Plus

                                                                            
Query: 309      gaggaggagaaggaggcccacggcgtgcggatgatcgcgctgctcatggagtgcgcggtg 368
                ||||| ||| ||||||| |||||||||||||||||||||||||| ||||||||||||| |
Sbjct: 23726640 gaggatgaggaggaggctcacggcgtgcggatgatcgcgctgctgatggagtgcgcggcg 23726699

                                                                            
Query: 369      gccatgtcggtgggaaacctcgccgacgccaacgggacgctcctcgagctgtcgcagatg 428
                || ||||||||||| |||||||| | |||||||||| |||| ||||||||||||||||||
Sbjct: 23726700 gcgatgtcggtgggcaacctcgcgggcgccaacggggcgctgctcgagctgtcgcagatg 23726759

                                                    
Query: 429      gcgtccccgtacgccccgtcctgcggcgagcggctc 464
                || || ||||||||  |||| |||||||||||||||
Sbjct: 23726760 gcctcgccgtacgcggcgtcgtgcggcgagcggctc 23726795
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>ref|XM_848180.1| PREDICTED: Canis familiaris similar to kelch-like (LOC610643), mRNA
          Length = 1282

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 267 gtggtcggtcaagagcggcaggagg 291
           |||||||||||||||||||||||||
Sbjct: 166 gtggtcggtcaagagcggcaggagg 190
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>ref|XM_522433.1| PREDICTED: Pan troglodytes similar to RAB13 protein (LOC467033), mRNA
          Length = 1275

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 303  cagggcgaggaggagaaggagg 324
            ||||||||||||||||||||||
Sbjct: 1072 cagggcgaggaggagaaggagg 1051
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>gb|BC028498.1| Mus musculus ubiquitin-like 5, mRNA (cDNA clone MGC:41053
           IMAGE:1400865), complete cds
          Length = 418

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 301 agcagggcgaggaggagaagga 322
           ||||||||||||||||||||||
Sbjct: 309 agcagggcgaggaggagaagga 288
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>ref|NM_025401.2| Mus musculus ubiquitin-like 5 (Ubl5), mRNA
          Length = 1940

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 301  agcagggcgaggaggagaagga 322
            ||||||||||||||||||||||
Sbjct: 1840 agcagggcgaggaggagaagga 1819
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>gb|AF232689.2| Rat cytomegalovirus Maastricht, complete genome
          Length = 230138

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 329   cggcgtgcggatgatcgcgctg 350
             ||||||||||||||||||||||
Sbjct: 23128 cggcgtgcggatgatcgcgctg 23149
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>dbj|AK154036.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN
            full-length enriched library, clone:E430026L04
            product:ubiquitin-like 5, full insert sequence
          Length = 2517

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 301  agcagggcgaggaggagaagga 322
            ||||||||||||||||||||||
Sbjct: 2431 agcagggcgaggaggagaagga 2410
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>dbj|AK009854.1| Mus musculus adult male tongue cDNA, RIKEN full-length enriched
           library, clone:2310046M01 product:ubiquitin-like 5, full
           insert sequence
          Length = 442

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 301 agcagggcgaggaggagaagga 322
           ||||||||||||||||||||||
Sbjct: 355 agcagggcgaggaggagaagga 334
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>dbj|AK051149.1| Mus musculus 12 days embryo spinal ganglion cDNA, RIKEN full-length
            enriched library, clone:D130006N16 product:ubiquitin-like
            5, full insert sequence
          Length = 1940

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 301  agcagggcgaggaggagaagga 322
            ||||||||||||||||||||||
Sbjct: 1840 agcagggcgaggaggagaagga 1819
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>dbj|AK002730.1| Mus musculus adult male kidney cDNA, RIKEN full-length enriched
           library, clone:0610031K06 product:ubiquitin-like 5, full
           insert sequence
          Length = 448

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 301 agcagggcgaggaggagaagga 322
           ||||||||||||||||||||||
Sbjct: 348 agcagggcgaggaggagaagga 327
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>dbj|AK012803.1| Mus musculus 10, 11 days embryo whole body cDNA, RIKEN full-length
           enriched library, clone:2810024N07
           product:ubiquitin-like 5, full insert sequence
          Length = 425

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 301 agcagggcgaggaggagaagga 322
           ||||||||||||||||||||||
Sbjct: 337 agcagggcgaggaggagaagga 316
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>dbj|AK007726.1| Mus musculus 10 day old male pancreas cDNA, RIKEN full-length
           enriched library, clone:1810037M15
           product:ubiquitin-like 5, full insert sequence
          Length = 407

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 301 agcagggcgaggaggagaagga 322
           ||||||||||||||||||||||
Sbjct: 320 agcagggcgaggaggagaagga 299
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>dbj|AK003992.1| Mus musculus 18-day embryo whole body cDNA, RIKEN full-length
           enriched library, clone:1110030M22
           product:ubiquitin-like 5, full insert sequence
          Length = 455

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 301 agcagggcgaggaggagaagga 322
           ||||||||||||||||||||||
Sbjct: 355 agcagggcgaggaggagaagga 334
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>gb|AC034102.32| Homo sapiens 12 BAC RP11-603J24 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 192203

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 303    cagggcgaggaggagaaggagg 324
              ||||||||||||||||||||||
Sbjct: 187260 cagggcgaggaggagaaggagg 187239
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>gb|AC164565.1| Mus musculus BAC clone RP23-99O13 from chromosome 9, complete sequence
          Length = 227367

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 301   agcagggcgaggaggagaagga 322
             ||||||||||||||||||||||
Sbjct: 50670 agcagggcgaggaggagaagga 50691
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>gb|AC157087.2| Mus musculus BAC clone RP23-287O24 from chromosome 9, complete sequence
          Length = 226149

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 304    agggcgaggaggagaaggagg 324
              |||||||||||||||||||||
Sbjct: 140711 agggcgaggaggagaaggagg 140731
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>ref|XM_422674.1| PREDICTED: Gallus gallus tyrosine kinase RYK (RYK), mRNA
          Length = 3454

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 92   ccagtacatgtacggcagcagcacc 116
            ||||| |||||||||||||||||||
Sbjct: 2253 ccagttcatgtacggcagcagcacc 2229
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>emb|CR385823.1| Gallus gallus finished cDNA, clone ChEST69b5
          Length = 2129

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 92   ccagtacatgtacggcagcagcacc 116
            ||||| |||||||||||||||||||
Sbjct: 1171 ccagttcatgtacggcagcagcacc 1147
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>dbj|AK007525.1| Mus musculus 10 day old male pancreas cDNA, RIKEN full-length
           enriched library, clone:1810017F10 product:similar to
           beta-casein-like protein [Homo sapiens], full insert
           sequence
          Length = 1023

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 302 gcagggcgaggaggagaagga 322
           |||||||||||||||||||||
Sbjct: 30  gcagggcgaggaggagaagga 50
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 309     gaggaggagaaggaggcccacggcg 333
               ||||||||||||||||| |||||||
Sbjct: 5239042 gaggaggagaaggaggcacacggcg 5239018
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>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome
          Length = 1849742

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 309    gaggaggagaaggaggcccacggcg 333
              |||||||||||||||||||| ||||
Sbjct: 200458 gaggaggagaaggaggcccaaggcg 200482



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 308     cgaggaggagaaggaggccc 327
               ||||||||||||||||||||
Sbjct: 1080632 cgaggaggagaaggaggccc 1080651
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>emb|CT573422.5| Mouse DNA sequence from clone RP24-76M8 on chromosome 9, complete
             sequence
          Length = 193236

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 304   agggcgaggaggagaaggagg 324
             |||||||||||||||||||||
Sbjct: 85014 agggcgaggaggagaaggagg 85034
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>emb|AL135999.4|CNS01DVP Human chromosome 14 DNA sequence BAC R-66N24 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 196311

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 304   agggcgaggaggagaaggagg 324
             |||||||||||||||||||||
Sbjct: 48978 agggcgaggaggagaaggagg 48958
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 309     gaggaggagaaggaggcccacggcg 333
               ||||||||||||||||| |||||||
Sbjct: 5239024 gaggaggagaaggaggcacacggcg 5239000
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>emb|AL731879.5|CNS08C8K Oryza sativa chromosome 12, . BAC OSJNBb0016I13 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 150192

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 309   gaggaggagaaggaggcccacggcg 333
             ||||||||||||||||| |||||||
Sbjct: 33282 gaggaggagaaggaggcacacggcg 33258
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>emb|AL713947.3|CNS07YPQ Oryza sativa chromosome 12, . BAC OJ1003_A04 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 124959

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 309   gaggaggagaaggaggcccacggcg 333
             ||||||||||||||||| |||||||
Sbjct: 24556 gaggaggagaaggaggcacacggcg 24580
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>gb|AE017221.1| Thermus thermophilus HB27, complete genome
          Length = 1894877

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 309     gaggaggagaaggaggcccacggcg 333
               |||||||||||||||||||| ||||
Sbjct: 1689340 gaggaggagaaggaggcccaaggcg 1689316



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 308    cgaggaggagaaggaggccc 327
              ||||||||||||||||||||
Sbjct: 753611 cgaggaggagaaggaggccc 753630
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>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome
          Length = 4109442

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 361     gcgcggtggccatgtcggtg 380
               ||||||||||||||||||||
Sbjct: 2665002 gcgcggtggccatgtcggtg 2664983
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>ref|XM_519420.1| PREDICTED: Pan troglodytes similar to Thromboxane-A synthase (TXA
            synthase) (TXS) (LOC463774), mRNA
          Length = 2785

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 104  cggcagcagcaccggccctt 123
            ||||||||||||||||||||
Sbjct: 2482 cggcagcagcaccggccctt 2501
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>ref|XM_866617.1| PREDICTED: Bos taurus similar to synaptotagmin II (LOC614954),
           partial mRNA
          Length = 1342

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 304 agggcgaggaggagaaggag 323
           ||||||||||||||||||||
Sbjct: 471 agggcgaggaggagaaggag 490
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>ref|XM_883371.1| PREDICTED: Bos taurus hypothetical protein LOC618643 (LOC618643),
           mRNA
          Length = 1104

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 185 gccggagttggtcgagccgg 204
           ||||||||||||||||||||
Sbjct: 562 gccggagttggtcgagccgg 581
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>gb|AC115884.9| Mus musculus chromosome 18, clone RP24-396H6, complete sequence
          Length = 192449

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 47     catgcatgattcttcgttaggcttgatt 74
              ||||||| |||||| |||||||||||||
Sbjct: 165643 catgcattattctttgttaggcttgatt 165670
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>gb|AC147052.2| Pan troglodytes BAC clone RP43-143G1 from 7, complete sequence
          Length = 170236

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 104    cggcagcagcaccggccctt 123
              ||||||||||||||||||||
Sbjct: 121000 cggcagcagcaccggccctt 121019
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>ref|XM_538477.2| PREDICTED: Canis familiaris similar to sine oculis homeobox homolog 3
            (LOC481356), mRNA
          Length = 1775

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 286  aggaggacgcgccgaagcag 305
            ||||||||||||||||||||
Sbjct: 1288 aggaggacgcgccgaagcag 1269
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>gb|BC014117.2| Homo sapiens thromboxane A synthase 1 (platelet, cytochrome P450,
            family 5, subfamily A), mRNA (cDNA clone MGC:20885
            IMAGE:4548935), complete cds
          Length = 2119

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 104  cggcagcagcaccggccctt 123
            ||||||||||||||||||||
Sbjct: 1669 cggcagcagcaccggccctt 1688
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>gb|AC146125.2| Pan troglodytes BAC clone RP43-4K13 from 7, complete sequence
          Length = 172424

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 104   cggcagcagcaccggccctt 123
             ||||||||||||||||||||
Sbjct: 80665 cggcagcagcaccggccctt 80684
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>ref|NM_001061.2| Homo sapiens thromboxane A synthase 1 (platelet, cytochrome P450,
            family 5, subfamily A) (TBXAS1), transcript variant
            TXS-I, mRNA
          Length = 1946

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 104  cggcagcagcaccggccctt 123
            ||||||||||||||||||||
Sbjct: 1619 cggcagcagcaccggccctt 1638
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>emb|Z84207.1|TTZ84207 T.thermophilus rpsO gene and pnp gene
          Length = 3570

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 308  cgaggaggagaaggaggccc 327
            ||||||||||||||||||||
Sbjct: 1711 cgaggaggagaaggaggccc 1730
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>emb|AL606706.3|OSJN00063 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0086G13,
             complete sequence
          Length = 127952

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 282   cggcaggaggacgcgccgaa 301
             ||||||||||||||||||||
Sbjct: 42514 cggcaggaggacgcgccgaa 42533
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>emb|AL606626.3|OSJN00050 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0088K19,
              complete sequence
          Length = 156002

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 282    cggcaggaggacgcgccgaa 301
              ||||||||||||||||||||
Sbjct: 130061 cggcaggaggacgcgccgaa 130080
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>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome
          Length = 4940217

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 358    agtgcgcggtggccatgtcg 377
              ||||||||||||||||||||
Sbjct: 889327 agtgcgcggtggccatgtcg 889308
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>emb|CR625096.1| full-length cDNA clone CS0DI041YE16 of Placenta Cot 25-normalized of
            Homo sapiens (human)
          Length = 1904

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 104  cggcagcagcaccggccctt 123
            ||||||||||||||||||||
Sbjct: 1534 cggcagcagcaccggccctt 1553
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>gb|AC015711.11| Homo sapiens, clone RP11-47G3, complete sequence
          Length = 172676

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 293    cgcgccgaagcagggcgagg 312
              ||||||||||||||||||||
Sbjct: 113565 cgcgccgaagcagggcgagg 113546
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>gb|AC068181.9| Homo sapiens chromosome 15, clone RP11-673C5, complete sequence
          Length = 185255

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 293   cgcgccgaagcagggcgagg 312
             ||||||||||||||||||||
Sbjct: 20598 cgcgccgaagcagggcgagg 20579
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>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome
          Length = 3561584

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 328    acggcgtgcggatgatcgcg 347
              ||||||||||||||||||||
Sbjct: 264862 acggcgtgcggatgatcgcg 264843
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>gb|L36086.1|HSTBXA12 Homo sapiens thromboxane A2 synthase (TBXAS1) gene, exon 12
          Length = 294

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 104 cggcagcagcaccggccctt 123
           ||||||||||||||||||||
Sbjct: 42  cggcagcagcaccggccctt 61
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>gb|AC161874.3| Mus musculus BAC clone RP24-177G20 from chromosome 18, complete sequence
          Length = 170891

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 47     catgcatgattcttcgttaggcttgatt 74
              ||||||| |||||| |||||||||||||
Sbjct: 109285 catgcattattctttgttaggcttgatt 109312
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>gb|AC154360.3| Mus musculus BAC clone RP23-167I5 from chromosome 14, complete sequence
          Length = 198179

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 301   agcagggcgaggaggagaaggagg 324
             ||||||| ||||||||||||||||
Sbjct: 78487 agcagggggaggaggagaaggagg 78464
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>gb|AF233624.1|AF233624 Homo sapiens thromboxane synthase (CYP5A1) gene, CYP5A1*8 allele,
            complete cds
          Length = 1806

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 104  cggcagcagcaccggccctt 123
            ||||||||||||||||||||
Sbjct: 1384 cggcagcagcaccggccctt 1403
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>gb|AF233623.1|AF233623 Homo sapiens thromboxane synthase (CYP5A1) gene, CYP5A1*7 allele,
            complete cds
          Length = 1806

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 104  cggcagcagcaccggccctt 123
            ||||||||||||||||||||
Sbjct: 1384 cggcagcagcaccggccctt 1403
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>gb|AF233622.1|AF233622 Homo sapiens thromboxane synthase (CYP5A1) gene, CYP5A1*6 allele,
            complete cds
          Length = 1806

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 104  cggcagcagcaccggccctt 123
            ||||||||||||||||||||
Sbjct: 1384 cggcagcagcaccggccctt 1403
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>gb|AF233621.1|AF233621 Homo sapiens thromboxane synthase (CYP5A1) gene, CYP5A1*5 allele,
            complete cds
          Length = 1806

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 104  cggcagcagcaccggccctt 123
            ||||||||||||||||||||
Sbjct: 1384 cggcagcagcaccggccctt 1403
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>gb|AF233620.1|AF233620 Homo sapiens thromboxane synthase (CYP5A1) gene, CYP5A1*4 allele,
            complete cds
          Length = 1806

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 104  cggcagcagcaccggccctt 123
            ||||||||||||||||||||
Sbjct: 1384 cggcagcagcaccggccctt 1403
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>gb|AF233619.1|AF233619 Homo sapiens thromboxane synthase (CYP5A1) gene, CYP5A1*3 allele,
            complete cds
          Length = 1806

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 104  cggcagcagcaccggccctt 123
            ||||||||||||||||||||
Sbjct: 1384 cggcagcagcaccggccctt 1403
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>gb|AF233618.1|AF233618 Homo sapiens thromboxane synthase (CYP5A1) gene, CYP5A1*2 allele,
            complete cds
          Length = 1806

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 104  cggcagcagcaccggccctt 123
            ||||||||||||||||||||
Sbjct: 1384 cggcagcagcaccggccctt 1403
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>gb|AF233617.1|AF233617 Homo sapiens thromboxane synthase (CYP5A1) gene, CYP5A1*1D allele,
            complete cds
          Length = 1806

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 104  cggcagcagcaccggccctt 123
            ||||||||||||||||||||
Sbjct: 1384 cggcagcagcaccggccctt 1403
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>gb|AF233616.1|AF233616 Homo sapiens thromboxane synthase (CYP5A1) gene, CYP5A1*1C allele,
            complete cds
          Length = 1806

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 104  cggcagcagcaccggccctt 123
            ||||||||||||||||||||
Sbjct: 1384 cggcagcagcaccggccctt 1403
to top
>gb|AF233615.1|AF233615 Homo sapiens thromboxane synthase (CYP5A1) gene, CYP5A1*1B allele,
            complete cds
          Length = 1806

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 104  cggcagcagcaccggccctt 123
            ||||||||||||||||||||
Sbjct: 1384 cggcagcagcaccggccctt 1403
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 282      cggcaggaggacgcgccgaa 301
                ||||||||||||||||||||
Sbjct: 21607972 cggcaggaggacgcgccgaa 21607991
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>dbj|D34625.2| Homo sapiens TBXAS1 gene for thromboxane synthase, complete cds
          Length = 16886

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 104   cggcagcagcaccggccctt 123
             ||||||||||||||||||||
Sbjct: 15251 cggcagcagcaccggccctt 15270
to top
>dbj|AK223466.1| Homo sapiens mRNA for thromboxane A synthase 1 (platelet, cytochrome
            P450, family 5, subfamily A) isoform TXS-I variant,
            clone: FCC117F07
          Length = 2207

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 104  cggcagcagcaccggccctt 123
            ||||||||||||||||||||
Sbjct: 1770 cggcagcagcaccggccctt 1789
to top
>gb|AF227920.1| Venturia inaequalis strain Ent27 14 alpha-demethylase (CYP51A1) gene,
            complete cds
          Length = 1830

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 338  gatgatcgcgctgctcatgg 357
            ||||||||||||||||||||
Sbjct: 1054 gatgatcgcgctgctcatgg 1073
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>gb|AF262757.1| Venturia inaequalis strain F445 14-a demethylase (CYP51A1) gene,
            complete cds
          Length = 1830

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 338  gatgatcgcgctgctcatgg 357
            ||||||||||||||||||||
Sbjct: 1054 gatgatcgcgctgctcatgg 1073
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>gb|AF262756.1| Venturia inaequalis strain Ent54 14-a demethylase (CYP51A1) gene,
            complete cds
          Length = 1830

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 338  gatgatcgcgctgctcatgg 357
            ||||||||||||||||||||
Sbjct: 1054 gatgatcgcgctgctcatgg 1073
to top
>gb|AC004961.2|AC004961 Homo sapiens PAC clone RP5-1098J4 from 7, complete sequence
          Length = 68130

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 104   cggcagcagcaccggccctt 123
             ||||||||||||||||||||
Sbjct: 33946 cggcagcagcaccggccctt 33927
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>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 170     catcggcaaggtcgtgccgg 189
               ||||||||||||||||||||
Sbjct: 2930343 catcggcaaggtcgtgccgg 2930362
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>gb|BC041157.1| Homo sapiens thromboxane A synthase 1 (platelet, cytochrome P450,
            family 5, subfamily A), transcript variant TXS-I, mRNA
            (cDNA clone MGC:48726 IMAGE:5755195), complete cds
          Length = 1989

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 104  cggcagcagcaccggccctt 123
            ||||||||||||||||||||
Sbjct: 1535 cggcagcagcaccggccctt 1554
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>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome
          Length = 4941439

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 358    agtgcgcggtggccatgtcg 377
              ||||||||||||||||||||
Sbjct: 920684 agtgcgcggtggccatgtcg 920665
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>gb|AC148879.2| Chlamydomonas reinhardtii clone cr-36D8, complete sequence
          Length = 53591

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 301   agcagggcgaggaggagaaggagg 324
             ||||||||||||||||| ||||||
Sbjct: 14980 agcagggcgaggaggaggaggagg 14957
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>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 443     cccgtcctgcggcgagcggc 462
               ||||||||||||||||||||
Sbjct: 2760662 cccgtcctgcggcgagcggc 2760681
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>emb|AL732321.18| Mouse DNA sequence from clone RP23-167N17 on chromosome X, complete
            sequence
          Length = 216244

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 304  agggcgaggaggagaaggag 323
            ||||||||||||||||||||
Sbjct: 5379 agggcgaggaggagaaggag 5398
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>gb|M80647.1|HUMTBSB Homo sapiens thromboxane synthase mRNA, complete cds
          Length = 1882

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 104  cggcagcagcaccggccctt 123
            ||||||||||||||||||||
Sbjct: 1555 cggcagcagcaccggccctt 1574


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,085,298
Number of Sequences: 3902068
Number of extensions: 3085298
Number of successful extensions: 92270
Number of sequences better than 10.0: 75
Number of HSP's better than 10.0 without gapping: 75
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 91228
Number of HSP's gapped (non-prelim): 1042
length of query: 464
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 442
effective length of database: 17,147,199,772
effective search space: 7579062299224
effective search space used: 7579062299224
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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