ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart45d07 |
|---|---|
| Clone Library Name | barley_pub |
>AKR2_ARATH (Q9SAR5) Ankyrin repeat domain-containing protein 2 (AtAKR2)| Length = 342 Score = 138 bits (348), Expect = 9e-33 Identities = 74/143 (51%), Positives = 96/143 (67%), Gaps = 2/143 (1%) Frame = +1 Query: 133 PGSLMRAKVKKTEGSSNEGQGVPPAAAAGLS-GPFDFSSMQSLLNDPSIKEMADQIARDP 309 P S K K E +S +A GL+ FDFS+M S+LNDPSI+EMA+QIA+DP Sbjct: 16 PKSTEENKSSKPESASGSSTS---SAMPGLNFNAFDFSNMASILNDPSIREMAEQIAKDP 72 Query: 310 AFNQMAEQLQKGAQGAGEQG-MPPLDPHQYIEKMQRVMENPQFMTMAERLGTALMQDPAM 486 AFNQ+AEQLQ+ AG++G P DP QY+ MQ+VM NP+F TMAE+LGTAL+QDP M Sbjct: 73 AFNQLAEQLQRSIPNAGQEGGFPNFDPQQYVNTMQQVMHNPEFKTMAEKLGTALVQDPQM 132 Query: 487 SSMLENLTSPTHKEELEERMSRI 555 S L+ ++P E ERM+R+ Sbjct: 133 SPFLDAFSNPETAEHFTERMARM 155
>SRP54_CANAL (O42816) Signal recognition particle 54 kDa protein homolog| Length = 556 Score = 34.7 bits (78), Expect = 0.19 Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 4/81 (4%) Frame = +1 Query: 256 LLNDPSIKEMADQIARDPAFNQMAEQLQKGAQGA--GEQGMPPL--DPHQYIEKMQRVME 423 + N+P ++ M Q +P F Q A + GA G G G+ + +P + Q + Sbjct: 466 MANNPQMQRMMQQAQSNPNFMQQAMNMLGGAGGGAGGAGGLAGMMNNPAMMQQAQQMMRS 525 Query: 424 NPQFMTMAERLGTALMQDPAM 486 NPQ M A++ +M++P M Sbjct: 526 NPQMMQQAQQ----MMKNPGM 542
>INP4B_MACFA (Q4R4D7) Type II inositol-3,4-bisphosphate 4-phosphatase (EC| 3.1.3.66) (Inositol polyphosphate 4-phosphatase type II) Length = 813 Score = 34.3 bits (77), Expect = 0.24 Identities = 17/39 (43%), Positives = 23/39 (58%) Frame = +1 Query: 163 KTEGSSNEGQGVPPAAAAGLSGPFDFSSMQSLLNDPSIK 279 K EG+S EGQ PAA A G F+S+Q N+P ++ Sbjct: 4 KEEGASEEGQHFLPAAQASDPGDCQFTSIQKTPNEPQLE 42
>INP4B_MOUSE (Q6P1Y8) Type II inositol-3,4-bisphosphate 4-phosphatase (EC| 3.1.3.66) (Inositol polyphosphate 4-phosphatase type II) Length = 924 Score = 33.1 bits (74), Expect = 0.54 Identities = 16/39 (41%), Positives = 23/39 (58%) Frame = +1 Query: 163 KTEGSSNEGQGVPPAAAAGLSGPFDFSSMQSLLNDPSIK 279 K EG+S EGQ PAA A F+S+Q + N+P ++ Sbjct: 4 KEEGTSEEGQHFLPAAQANDPEDIQFTSIQKIPNEPQLE 42
>INP4B_PONPY (Q5RA60) Type II inositol-3,4-bisphosphate 4-phosphatase (EC| 3.1.3.66) (Inositol polyphosphate 4-phosphatase type II) Length = 924 Score = 32.7 bits (73), Expect = 0.71 Identities = 16/39 (41%), Positives = 22/39 (56%) Frame = +1 Query: 163 KTEGSSNEGQGVPPAAAAGLSGPFDFSSMQSLLNDPSIK 279 K EG+S EGQ P A A G F+S+Q N+P ++ Sbjct: 4 KEEGASEEGQHFLPTAQASDPGDCQFTSIQKTPNEPQLE 42
>INP4B_HUMAN (O15327) Type II inositol-3,4-bisphosphate 4-phosphatase (EC| 3.1.3.66) (Inositol polyphosphate 4-phosphatase type II) Length = 924 Score = 32.7 bits (73), Expect = 0.71 Identities = 16/39 (41%), Positives = 22/39 (56%) Frame = +1 Query: 163 KTEGSSNEGQGVPPAAAAGLSGPFDFSSMQSLLNDPSIK 279 K EG+S EGQ P A A G F+S+Q N+P ++ Sbjct: 4 KEEGASEEGQHFLPTAQANDPGDCQFTSIQKTPNEPQLE 42
>GALT1_HUMAN (Q10472) Polypeptide N-acetylgalactosaminyltransferase 1 (EC| 2.4.1.41) (Protein-UDP acetylgalactosaminyltransferase 1) (UDP-GalNAc:polypeptide N-acetylgalactosaminyltransferase 1) (Polypeptide GalNAc transferase 1) (GalNAc-T1) (pp-GaNTase 1) Length = 559 Score = 32.0 bits (71), Expect = 1.2 Identities = 16/43 (37%), Positives = 24/43 (55%) Frame = +1 Query: 328 EQLQKGAQGAGEQGMPPLDPHQYIEKMQRVMENPQFMTMAERL 456 E +QK +G GE G P + P + EKM+ + + QF MA + Sbjct: 49 EPVQKPHEGPGEMGKPVVIPKEDQEKMKEMFKINQFNLMASEM 91
>GALT1_BOVIN (Q07537) Polypeptide N-acetylgalactosaminyltransferase 1 (EC| 2.4.1.41) (Protein-UDP acetylgalactosaminyltransferase 1) (UDP-GalNAc:polypeptide N-acetylgalactosaminyltransferase 1) (Polypeptide GalNAc transferase 1) (GalNAc-T1) (pp-GaNTase 1) Length = 559 Score = 32.0 bits (71), Expect = 1.2 Identities = 16/43 (37%), Positives = 24/43 (55%) Frame = +1 Query: 328 EQLQKGAQGAGEQGMPPLDPHQYIEKMQRVMENPQFMTMAERL 456 E +QK +G GE G P + P + EKM+ + + QF MA + Sbjct: 49 EPVQKPHEGPGEMGKPVVIPKEDQEKMKEMFKINQFNLMASEM 91
>RECN_HAEIN (P44496) DNA repair protein recN (Recombination protein N)| Length = 558 Score = 32.0 bits (71), Expect = 1.2 Identities = 26/101 (25%), Positives = 49/101 (48%), Gaps = 10/101 (9%) Frame = +1 Query: 280 EMADQIARDPAFNQMAEQLQKGAQGAGEQGMPPLDP-----HQYIEKMQRVMENPQFMTM 444 E+ D+ R + Q+ + Q Q E +D QYI+++ + +PQ+ + Sbjct: 212 ELEDEQRRLSSSEQLTQLSQSALQILSENDTVNIDSLLYRATQYIDELAEL--DPQYAEV 269 Query: 445 AERLGTALMQDPAMSSMLENLTS-----PTHKEELEERMSR 552 L AL+Q +S ++NL+S P +E+E+R+S+ Sbjct: 270 QNMLNDALIQVQEATSEVQNLSSNIEQDPQLLQEIEQRISQ 310
>GALT1_RAT (Q10473) Polypeptide N-acetylgalactosaminyltransferase 1 (EC| 2.4.1.41) (Protein-UDP acetylgalactosaminyltransferase 1) (UDP-GalNAc:polypeptide N-acetylgalactosaminyltransferase 1) (Polypeptide GalNAc transferase 1) (GalNAc-T1) (pp-GaNTase 1) [C Length = 559 Score = 31.6 bits (70), Expect = 1.6 Identities = 16/43 (37%), Positives = 24/43 (55%) Frame = +1 Query: 328 EQLQKGAQGAGEQGMPPLDPHQYIEKMQRVMENPQFMTMAERL 456 E +QK +G GE G P + P + EKM+ + + QF MA + Sbjct: 49 ELVQKPHEGPGEMGKPVVIPKEDQEKMKEMFKINQFNLMASEM 91
>GALT1_MOUSE (O08912) Polypeptide N-acetylgalactosaminyltransferase 1 (EC| 2.4.1.41) (Protein-UDP acetylgalactosaminyltransferase 1) (UDP-GalNAc:polypeptide N-acetylgalactosaminyltransferase 1) (Polypeptide GalNAc transferase 1) (GalNAc-T1) (pp-GaNTase 1) Length = 559 Score = 31.6 bits (70), Expect = 1.6 Identities = 16/43 (37%), Positives = 24/43 (55%) Frame = +1 Query: 328 EQLQKGAQGAGEQGMPPLDPHQYIEKMQRVMENPQFMTMAERL 456 E +QK +G GE G P + P + EKM+ + + QF MA + Sbjct: 49 ELVQKPHEGPGEMGKPVVIPKEDQEKMKEMFKINQFNLMASEM 91
>INP4B_RAT (Q9QWG5) Type II inositol-3,4-bisphosphate 4-phosphatase (EC| 3.1.3.66) (Inositol polyphosphate 4-phosphatase type II) Length = 928 Score = 31.6 bits (70), Expect = 1.6 Identities = 16/39 (41%), Positives = 22/39 (56%) Frame = +1 Query: 163 KTEGSSNEGQGVPPAAAAGLSGPFDFSSMQSLLNDPSIK 279 K EG+S EGQ PAA A F+S+Q N+P ++ Sbjct: 4 KEEGTSEEGQHFLPAAQANDPEDIQFTSIQKSPNEPQLE 42
>GALT1_PIG (Q29121) Polypeptide N-acetylgalactosaminyltransferase 1 (EC| 2.4.1.41) (Protein-UDP acetylgalactosaminyltransferase 1) (UDP-GalNAc:polypeptide N-acetylgalactosaminyltransferase 1) (Polypeptide GalNAc transferase 1) (GalNAc-T1) (pp-GaNTase 1) [C Length = 559 Score = 30.8 bits (68), Expect = 2.7 Identities = 15/43 (34%), Positives = 24/43 (55%) Frame = +1 Query: 328 EQLQKGAQGAGEQGMPPLDPHQYIEKMQRVMENPQFMTMAERL 456 E +QK +G GE G P + P + +KM+ + + QF MA + Sbjct: 49 EPVQKPHEGPGEMGKPVVIPKEDQDKMKEMFKINQFNLMASEM 91
>KCY_MYCGA (Q7NBV1) Cytidylate kinase (EC 2.7.4.14) (CK) (Cytidine| monophosphate kinase) (CMP kinase) Length = 226 Score = 30.8 bits (68), Expect = 2.7 Identities = 14/33 (42%), Positives = 21/33 (63%) Frame = +1 Query: 244 SMQSLLNDPSIKEMADQIARDPAFNQMAEQLQK 342 ++ LLNDP+I + A +IA+DP A LQ+ Sbjct: 83 NISQLLNDPTISKGASEIAQDPKIRAYALSLQQ 115
>RRBP1_MOUSE (Q99PL5) Ribosome-binding protein 1 (Ribosome receptor protein)| (mRRp) Length = 1605 Score = 30.8 bits (68), Expect = 2.7 Identities = 28/133 (21%), Positives = 51/133 (38%), Gaps = 11/133 (8%) Frame = +1 Query: 154 KVKKTEGSSNEG---QGVPPAAAAGLSGPFDFSSMQSLLNDPSIKEMADQIARDPAFNQM 324 +VKK+EGS N+G +G P P + + N EMA + + Q Sbjct: 759 QVKKSEGSPNQGKKAEGAPNQGKKKDGSPSQAKKVDAAANQGKKSEMAPAQGQKASMVQS 818 Query: 325 AE--------QLQKGAQGAGEQGMPPLDPHQYIEKMQRVMENPQFMTMAERLGTALMQDP 480 E + + G++ GE G P D ++ + T+ +G+ + + Sbjct: 819 QEAPKQDAPAKKKSGSRKKGEPGPPDCDGPLFL----------PYKTLVSTVGSMVFSEG 868 Query: 481 AMSSMLENLTSPT 519 ++E L+ T Sbjct: 869 EAQRLIEILSEKT 881
>CP4A5_RABIT (P14579) Cytochrome P450 4A5 precursor (EC 1.14.15.3) (CYPIVA5)| (Lauric acid omega-hydroxylase) Length = 511 Score = 30.4 bits (67), Expect = 3.5 Identities = 21/83 (25%), Positives = 35/83 (42%), Gaps = 14/83 (16%) Frame = +2 Query: 179 PTKVKVFLQLPLQACRVLSIFLLCKVCSMIHL*RRWQIRL--QGTLHSIRWLSSYRKVLR 352 PT++ L LQ +L + LL + ++L R+W +R Q WL + + + Sbjct: 8 PTRLPGSLSGLLQVAALLGLLLLLLKAAQLYLRRQWLLRALQQFPCPPFHWLLGHSREFQ 67 Query: 353 VQEN------------RACLHWI 385 + + RAC HWI Sbjct: 68 MNQELQQILKWVEKFPRACPHWI 90
>HMPB_DROME (P31264) Homeotic protein proboscipedia| Length = 782 Score = 30.4 bits (67), Expect = 3.5 Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 5/66 (7%) Frame = +1 Query: 343 GAQGAGEQGMPPLDPHQYIEKM-----QRVMENPQFMTMAERLGTALMQDPAMSSMLENL 507 G G G+QG+PP+ + KM +R + +MT +E G + P+M+ L +L Sbjct: 57 GQPGIGQQGVPPVPSVLMVNKMTPNCDKRSADTAYWMTASE--GGFINSQPSMAEFLNHL 114 Query: 508 TSPTHK 525 + + K Sbjct: 115 SPESPK 120
>THIC_BACCR (Q815D5) Thiamine biosynthesis protein thiC| Length = 586 Score = 29.6 bits (65), Expect = 6.0 Identities = 20/60 (33%), Positives = 29/60 (48%) Frame = +1 Query: 55 KQATSDEFFFPYSSYLPGWRRVEIFHPGSLMRAKVKKTEGSSNEGQGVPPAAAAGLSGPF 234 KQ+ S E SS LPG ++V + P M+ +++ E S G PP SGP+ Sbjct: 2 KQSVSAEQIELKSS-LPGSKKVYVDGPREGMKVPMREIEQSETNGVPNPPIRVYDTSGPY 60
>THIC_BACC1 (P61423) Thiamine biosynthesis protein thiC| Length = 586 Score = 29.6 bits (65), Expect = 6.0 Identities = 20/60 (33%), Positives = 29/60 (48%) Frame = +1 Query: 55 KQATSDEFFFPYSSYLPGWRRVEIFHPGSLMRAKVKKTEGSSNEGQGVPPAAAAGLSGPF 234 KQ+ S E SS LPG ++V + P M+ +++ E S G PP SGP+ Sbjct: 2 KQSVSAEQIELKSS-LPGSKKVYVDGPREGMKVPMREIEQSDTNGVPNPPIRVYDTSGPY 60
>THIC_BACAN (Q81WY7) Thiamine biosynthesis protein thiC| Length = 586 Score = 29.6 bits (65), Expect = 6.0 Identities = 20/60 (33%), Positives = 29/60 (48%) Frame = +1 Query: 55 KQATSDEFFFPYSSYLPGWRRVEIFHPGSLMRAKVKKTEGSSNEGQGVPPAAAAGLSGPF 234 KQ+ S E SS LPG ++V + P M+ +++ E S G PP SGP+ Sbjct: 2 KQSVSAEQIELKSS-LPGSKKVYVDGPREGMKVPMREIEQSDTNGVPNPPIRVYDTSGPY 60
>ANDR_PAPHA (O97960) Androgen receptor (Dihydrotestosterone receptor)| Length = 895 Score = 29.3 bits (64), Expect = 7.8 Identities = 17/47 (36%), Positives = 23/47 (48%) Frame = +1 Query: 166 TEGSSNEGQGVPPAAAAGLSGPFDFSSMQSLLNDPSIKEMADQIARD 306 T+G E G +AAAG SG + S SL ++ E A +RD Sbjct: 300 TKGLEGESLGCSGSAAAGSSGTLELPSTLSLYKSGALDEAAAYQSRD 346
>ANDR_MACMU (Q6QT55) Androgen receptor (Dihydrotestosterone receptor)| Length = 895 Score = 29.3 bits (64), Expect = 7.8 Identities = 17/47 (36%), Positives = 23/47 (48%) Frame = +1 Query: 166 TEGSSNEGQGVPPAAAAGLSGPFDFSSMQSLLNDPSIKEMADQIARD 306 T+G E G +AAAG SG + S SL ++ E A +RD Sbjct: 300 TKGLEGESLGCSGSAAAGSSGTLELPSTLSLYKSGALDEAAAYQSRD 346
>ANDR_MACFA (O97952) Androgen receptor (Dihydrotestosterone receptor)| Length = 895 Score = 29.3 bits (64), Expect = 7.8 Identities = 17/47 (36%), Positives = 23/47 (48%) Frame = +1 Query: 166 TEGSSNEGQGVPPAAAAGLSGPFDFSSMQSLLNDPSIKEMADQIARD 306 T+G E G +AAAG SG + S SL ++ E A +RD Sbjct: 300 TKGLEGESLGCSGSAAAGSSGTLELPSTLSLYKSGALDEAAAYQSRD 346
>NAPC_ECOLI (P0ABL5) Cytochrome c-type protein napC| Length = 200 Score = 29.3 bits (64), Expect = 7.8 Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 6/58 (10%) Frame = -3 Query: 552 TRHALFKLLLMCWTGQVFQHTGHSRILHKSSPEAFC-HCHELR-----VFHDPLHFFN 397 +R AL LLL+ + G + G + + K++ E FC CHE+R + D +H+ N Sbjct: 22 SRLALGTLLLIGFVGGIVFWGGFNTGMEKANTEEFCISCHEMRNTVYQEYMDSVHYNN 79
>NAPC_ECOL6 (P0ABL6) Cytochrome c-type protein napC| Length = 200 Score = 29.3 bits (64), Expect = 7.8 Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 6/58 (10%) Frame = -3 Query: 552 TRHALFKLLLMCWTGQVFQHTGHSRILHKSSPEAFC-HCHELR-----VFHDPLHFFN 397 +R AL LLL+ + G + G + + K++ E FC CHE+R + D +H+ N Sbjct: 22 SRLALGTLLLIGFVGGIVFWGGFNTGMEKANTEEFCISCHEMRNTVYQEYMDSVHYNN 79
>NAPC_ECO57 (P0ABL7) Cytochrome c-type protein napC| Length = 200 Score = 29.3 bits (64), Expect = 7.8 Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 6/58 (10%) Frame = -3 Query: 552 TRHALFKLLLMCWTGQVFQHTGHSRILHKSSPEAFC-HCHELR-----VFHDPLHFFN 397 +R AL LLL+ + G + G + + K++ E FC CHE+R + D +H+ N Sbjct: 22 SRLALGTLLLIGFVGGIVFWGGFNTGMEKANTEEFCISCHEMRNTVYQEYMDSVHYNN 79
>ANDR_PANTR (O97775) Androgen receptor (Dihydrotestosterone receptor)| Length = 911 Score = 29.3 bits (64), Expect = 7.8 Identities = 17/47 (36%), Positives = 23/47 (48%) Frame = +1 Query: 166 TEGSSNEGQGVPPAAAAGLSGPFDFSSMQSLLNDPSIKEMADQIARD 306 T+G E G +AAAG SG + S SL ++ E A +RD Sbjct: 314 TKGLEGESLGCSGSAAAGSSGTLELPSTLSLYKSGALDEAAAYQSRD 360
>ANDR_HUMAN (P10275) Androgen receptor (Dihydrotestosterone receptor)| Length = 919 Score = 29.3 bits (64), Expect = 7.8 Identities = 17/47 (36%), Positives = 23/47 (48%) Frame = +1 Query: 166 TEGSSNEGQGVPPAAAAGLSGPFDFSSMQSLLNDPSIKEMADQIARD 306 T+G E G +AAAG SG + S SL ++ E A +RD Sbjct: 315 TKGLEGESLGCSGSAAAGSSGTLELPSTLSLYKSGALDEAAAYQSRD 361 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.314 0.130 0.370 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 76,025,601 Number of Sequences: 219361 Number of extensions: 1500042 Number of successful extensions: 3451 Number of sequences better than 10.0: 28 Number of HSP's better than 10.0 without gapping: 3339 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3448 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4528412720 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (22.0 bits)
