>RHM1_ARATH (Q9SYM5) Probable rhamnose biosynthetic enzyme 1 (EC 4.2.1.-) (EC|
           1.1.1.-)
          Length = 669

 Score =  177 bits (448), Expect = 1e-44
 Identities = 81/114 (71%), Positives = 96/114 (84%), Gaps = 1/114 (0%)
 Frame = +2

Query: 95  TNGS-SPPALKFLIYGRTGWIGGLLGKLCTAQGIPFAYGAGRLENRAQLEADIDEVAPTH 271
           +NG+   P+LKFLIYG+TGWIGGLLGK+C  QGI + YG GRLE+R+ L  DI  V PTH
Sbjct: 376 SNGTPQKPSLKFLIYGKTGWIGGLLGKICDKQGIAYEYGKGRLEDRSSLLQDIQSVKPTH 435

Query: 272 VFNAAGVTGRPNVDWCETHRVETIRANVCGTLTLADVCRARGLVLINYATGCIF 433
           VFN+AGVTGRPNVDWCE+H+ ETIRANV GTLTLADVCR  GL+++N+ATGCIF
Sbjct: 436 VFNSAGVTGRPNVDWCESHKTETIRANVAGTLTLADVCREHGLLMMNFATGCIF 489

>RHM3_ARATH (Q9LH76) Probable rhamnose biosynthetic enzyme 3 (EC 4.2.1.-) (EC|
           1.1.1.-)
          Length = 664

 Score =  173 bits (438), Expect = 2e-43
 Identities = 77/106 (72%), Positives = 91/106 (85%)
 Frame = +2

Query: 116 ALKFLIYGRTGWIGGLLGKLCTAQGIPFAYGAGRLENRAQLEADIDEVAPTHVFNAAGVT 295
           +LKFLIYG+TGW+GGLLGKLC  QGIP+ YG GRLE+RA L ADI  + P+HVFNAAG+T
Sbjct: 379 SLKFLIYGKTGWLGGLLGKLCEKQGIPYEYGKGRLEDRASLIADIRSIKPSHVFNAAGLT 438

Query: 296 GRPNVDWCETHRVETIRANVCGTLTLADVCRARGLVLINYATGCIF 433
           GRPNVDWCE+H+ ETIR NV GTLTLADVCR   L+++N+ATGCIF
Sbjct: 439 GRPNVDWCESHKTETIRVNVAGTLTLADVCRENDLLMMNFATGCIF 484

>RHM2_ARATH (Q9LPG6) Probable rhamnose biosynthetic enzyme 2 (EC 4.2.1.-) (EC|
           1.1.1.-) (RHAMNOSE BIOSYNTHESIS 2 protein) (NDP-rhamnose
           synthase) (MUCILAGE-MODIFIED4 protein) (UDP-L-rhamnose
           synthase MUM4)
          Length = 667

 Score =  171 bits (434), Expect = 5e-43
 Identities = 80/114 (70%), Positives = 93/114 (81%), Gaps = 2/114 (1%)
 Frame = +2

Query: 98  NGSS--PPALKFLIYGRTGWIGGLLGKLCTAQGIPFAYGAGRLENRAQLEADIDEVAPTH 271
           NG S    +LKFLIYG+TGW+GGLLGKLC  QGI + YG GRLE+RA L ADI  + PTH
Sbjct: 374 NGDSGDKASLKFLIYGKTGWLGGLLGKLCEKQGITYEYGKGRLEDRASLVADIRSIKPTH 433

Query: 272 VFNAAGVTGRPNVDWCETHRVETIRANVCGTLTLADVCRARGLVLINYATGCIF 433
           VFNAAG+TGRPNVDWCE+H+ ETIR NV GTLTLADVCR   L+++N+ATGCIF
Sbjct: 434 VFNAAGLTGRPNVDWCESHKPETIRVNVAGTLTLADVCRENDLLMMNFATGCIF 487

>ARLY_HELHP (Q7VFF8) Argininosuccinate lyase (EC 4.3.2.1) (Arginosuccinase)|
           (ASAL)
          Length = 472

 Score = 32.0 bits (71), Expect = 0.67
 Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
 Frame = +2

Query: 113 PALKFLIYGRTGWI-GGLLGKLCTAQGIPFAYGAGRLENR 229
           P +  L+ G++G + G L+G LC  +G+PFAY     E++
Sbjct: 286 PDVPELLRGKSGRVYGELMGLLCVMKGLPFAYNKDTQEDK 325

>REPS2_MOUSE (Q80XA6) RalBP1-associated Eps domain-containing protein 2|
           (RalBP1-interacting protein 2) (Partner of RalBP1)
          Length = 521

 Score = 30.4 bits (67), Expect = 1.9
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = +1

Query: 43  PPFPLPSRISPFRHGDLHQRLLAAGAQVPHLRPHRLD 153
           PP P P++  P    DLH +L  A +Q     P ++D
Sbjct: 380 PPRPCPTQSEPVSEADLHSQLNRAPSQAAESSPTKMD 416

>ARLY_OCEIH (Q8ELT9) Argininosuccinate lyase (EC 4.3.2.1) (Arginosuccinase)|
           (ASAL)
          Length = 459

 Score = 30.0 bits (66), Expect = 2.5
 Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
 Frame = +2

Query: 113 PALKFLIYGRTGWI-GGLLGKLCTAQGIPFAYGAGRLENR 229
           P +  L+ G+TG + G L+G L T +G+P AY     E++
Sbjct: 285 PDVAELVRGKTGRVYGHLMGMLTTLKGLPLAYNKDMQEDK 324

>Y219_HAEIN (P44577) Hypothetical protein HI0219|
          Length = 213

 Score = 30.0 bits (66), Expect = 2.5
 Identities = 20/48 (41%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
 Frame = +2

Query: 80  AMAISTNGSSPPALKFLIYGRTGWIGGLLGKLCT-AQGIPFAYGAGRL 220
           A  + T G S   L FLI     W+  L G L T A G P+  G GRL
Sbjct: 139 AGGLLTFGMSIVTLSFLITTPEAWVPNLGGDLPTPAYGFPYLSGVGRL 186

>ISPE_GLOVI (Q7NPF3) 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC|
           2.7.1.148) (CMK)
           (4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol
           kinase)
          Length = 302

 Score = 29.6 bits (65), Expect = 3.3
 Identities = 14/34 (41%), Positives = 20/34 (58%)
 Frame = +1

Query: 61  SRISPFRHGDLHQRLLAAGAQVPHLRPHRLDRGS 162
           +RI+P  H DL + +L A  QV  LR H +  G+
Sbjct: 212 ARIAPLLHNDLERAVLPAYPQVSALREHLVSAGA 245

>AT10A_MOUSE (O54827) Probable phospholipid-transporting ATPase VA (EC 3.6.3.1)|
           (P-locus fat-associated ATPase)
          Length = 1508

 Score = 29.6 bits (65), Expect = 3.3
 Identities = 20/83 (24%), Positives = 40/83 (48%), Gaps = 5/83 (6%)
 Frame = +2

Query: 119 LKFLIYGRTGWI--GGLLGKLCTAQGIPFAYGAGRLENRAQLEADIDE---VAPTHVFNA 283
           +K++   +TG +    ++ + CT  GI +++ A         EAD +E   V+     + 
Sbjct: 425 IKYIFSDKTGTLTENKMVFRRCTVSGIEYSHDANAQRLARYQEADSEEEEVVSKVGTISH 484

Query: 284 AGVTGRPNVDWCETHRVETIRAN 352
            G TG     W  TH+ ++I+++
Sbjct: 485 RGSTGSHQSIWM-THKTQSIKSH 506

>ERYA1_SACER (Q03131) Erythronolide synthase, modules 1 and 2 (EC 2.3.1.94) (ORF|
            1) (6-deoxyerythronolide B synthase I) (DEBS 1)
          Length = 3491

 Score = 29.6 bits (65), Expect = 3.3
 Identities = 38/138 (27%), Positives = 53/138 (38%), Gaps = 35/138 (25%)
 Frame = +2

Query: 80   AMAISTNGSSPPALKFLIYGRTGWIGGLLGKLCTAQGIPF----------AYGAGRLENR 229
            A A +T+    P    L+ G TG +GG + +    +G P           A GAG L   
Sbjct: 1600 AAAPATDDEWKPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELV-- 1657

Query: 230  AQLEA----------DI--------------DEVAPTHVFNAAGVTGRPNVDWCETHRVE 337
            A+LEA          D+              D+V  + VF+AA       VD     R+E
Sbjct: 1658 AELEALGARTTVAACDVTDRESVRELLGGIGDDVPLSAVFHAAATLDDGTVDTLTGERIE 1717

Query: 338  -TIRANVCGTLTLADVCR 388
               RA V G   L ++ R
Sbjct: 1718 RASRAKVLGARNLHELTR 1735

>ARLY_LACPL (P59617) Argininosuccinate lyase (EC 4.3.2.1) (Arginosuccinase)|
           (ASAL)
          Length = 467

 Score = 29.3 bits (64), Expect = 4.3
 Identities = 24/72 (33%), Positives = 32/72 (44%), Gaps = 5/72 (6%)
 Frame = +2

Query: 113 PALKFLIYGRTGWI-GGLLGKLCTAQGIPFAYGAGRLENRAQLEADIDEVAPT----HVF 277
           P +  LI G++G + G L+G L   +GIP AY     E++   E   D V       HVF
Sbjct: 288 PDMAELIRGKSGRVYGNLMGLLTVMKGIPLAYNKDLQEDK---EGAFDTVTTVLTSLHVF 344

Query: 278 NAAGVTGRPNVD 313
                T   N D
Sbjct: 345 TGMLATLTVNED 356

>TREZ_ARTSQ (Q44316) Malto-oligosyltrehalose trehalohydrolase (EC 3.2.1.141)|
           (MTHase) (4-alpha-D-((1->4)-alpha-D-glucano)trehalose
           trehalohydrolase) (Maltooligosyl trehalose
           trehalohydrolase)
          Length = 598

 Score = 28.5 bits (62), Expect = 7.4
 Identities = 14/40 (35%), Positives = 18/40 (45%)
 Frame = +2

Query: 209 AGRLENRAQLEADIDEVAPTHVFNAAGVTGRPNVDWCETH 328
           AG+L+  A L  D  E+ P + FN     G   V W   H
Sbjct: 137 AGKLDYLAGLGVDFIELLPVNAFNGTHNWGYDGVQWFAVH 176

>TREZ_RHIS1 (Q53238) Malto-oligosyltrehalose trehalohydrolase (EC 3.2.1.141)|
           (MTHase) (4-alpha-D-((1->4)-alpha-D-glucano)trehalose
           trehalohydrolase) (Maltooligosyl trehalose
           trehalohydrolase)
          Length = 596

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 14/40 (35%), Positives = 18/40 (45%)
 Frame = +2

Query: 209 AGRLENRAQLEADIDEVAPTHVFNAAGVTGRPNVDWCETH 328
           AG+L+  A L  D  E+ P + FN     G   V W   H
Sbjct: 135 AGKLDYLAGLGIDFIELLPVNAFNGTHNWGYDGVQWFAVH 174

>MUTL_THET8 (Q9RA54) DNA mismatch repair protein mutL|
          Length = 545

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
 Frame = +2

Query: 167 GKLCTAQGIPFAYGAGRLENRAQL-EADIDEVAPTHVFNAAGVTGRP 304
           G+L   + +P AYGAG LE +  +   ++    P  +F A  V GRP
Sbjct: 201 GRLLAKRLLPLAYGAGGLEVQGLVSRPEVSRTRPDRLFLA--VNGRP 245

>ARLY1_RHILO (Q98G36) Argininosuccinate lyase 1 (EC 4.3.2.1) (Arginosuccinase 1)|
           (ASAL 1)
          Length = 466

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
 Frame = +2

Query: 128 LIYGRTGWIGG-LLGKLCTAQGIPFAYGAGRLENRAQLEADIDEVAPTHVFNAAGVTG 298
           L+ G+TG + G L+G L   +G+P  YG    E++      + + A T     A +TG
Sbjct: 297 LVRGKTGRVNGHLVGLLTVMKGMPLTYGKDMQEDK----ESVFDAAETLDLMLAAMTG 350

>ARLY_GLOVI (Q7NLS0) Argininosuccinate lyase (EC 4.3.2.1) (Arginosuccinase)|
           (ASAL)
          Length = 468

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
 Frame = +2

Query: 113 PALKFLIYGRTGWI-GGLLGKLCTAQGIPFAYGAGRLENR 229
           P +  L+ G+TG I G L+G L   +G+P AY     E++
Sbjct: 287 PDVPELVRGKTGRIFGHLMGMLTVLKGLPLAYNKDLQEDK 326


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,325,707
Number of Sequences: 219361
Number of extensions: 710721
Number of successful extensions: 2761
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 2662
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2759
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2511994855
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)