ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart45c09 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT009287.1| Triticum aestivum clone wlm0.pk0014.b1:fis, full insert mRNA sequence Length = 1486 Score = 704 bits (355), Expect = 0.0 Identities = 400/415 (96%) Strand = Plus / Plus Query: 144 gtcgcggcgggatacgccgcgagggagttcggaaagcagggcgtccagcccggggagctc 203 ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 8 gtcgctgcgggatacgccgcgagggagttcggcaagcagggcgtccagcccggggagctc 67 Query: 204 gccatcatctccaaggagtccgtggctccctatgagcgtcctgcactcagcaagggctac 263 ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||| Sbjct: 68 gccatcatctccaaggagtccgtggctccgtatgagcgtcctgcgctcagcaagggctac 127 Query: 264 ctctttccccagaatgccgcgaggcttccaggattccacacctgcgtcgggagcggcggg 323 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 128 ctctttccccagaatgccgccaggcttccaggattccacacctgcgtcgggagcggcggg 187 Query: 324 gagaagctcttgcccgaatggtacacacaaaaaggcattgagctgatcctcagcacggaa 383 |||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| Sbjct: 188 gagaagctcttgcccgaatggtacacggaaaaaggcattgagctgatcctgagcacggaa 247 Query: 384 attgtcaaggctgatcttgcctctaagacattgaccagtgcagctggagcaaccttcacc 443 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 248 attgtcaaggctgatcttgcctccaagacattgaccagtgcagctggagcaaccttcacc 307 Query: 444 tatgagaccttgctcattgctactggctcctcgaccataaagctcactgactttggcgtc 503 ||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| Sbjct: 308 tatgagaccttgctcatcgccactggctcctcgaccataaagctcactgactttggcgtt 367 Query: 504 caaggagcagaatcagacaacatattgtatctacgggaaattgatgacgccgaca 558 |||||||| |||||| ||||||||||||||||| ||||||||||||||||||||| Sbjct: 368 caaggagcggaatcaaacaacatattgtatctaagggaaattgatgacgccgaca 422
>ref|XM_483751.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1721 Score = 460 bits (232), Expect = e-126 Identities = 370/416 (88%) Strand = Plus / Plus Query: 99 atggcgtccgagaagcacttcaagtacgtcatcctcggcggcggcgtcgcggcgggatac 158 |||||| ||| ||||||||||| ||||||||||||||||| |||||||| ||||||||| Sbjct: 98 atggcggccgcgaagcacttcacctacgtcatcctcggcggaggcgtcgccgcgggatac 157 Query: 159 gccgcgagggagttcggaaagcagggcgtccagcccggggagctcgccatcatctccaag 218 || ||| ||||||||| |||||||||||| |||||||||| |||||||||||||||||| Sbjct: 158 gctgcgcgggagttcgccaagcagggcgtcaagcccggggaactcgccatcatctccaag 217 Query: 219 gagtccgtggctccctatgagcgtcctgcactcagcaagggctacctctttccccagaat 278 || || ||||||||||| ||||||||||| ||||||||||| ||||||||||| |||||| Sbjct: 218 gaatcggtggctccctacgagcgtcctgctctcagcaagggatacctctttcctcagaat 277 Query: 279 gccgcgaggcttccaggattccacacctgcgtcgggagcggcggggagaagctcttgccc 338 || || || ||||| ||||||||||||||||||||||||||||| |||| ||||||||| Sbjct: 278 gcagccagacttccgggattccacacctgcgtcgggagcggcggagagaggctcttgcct 337 Query: 339 gaatggtacacacaaaaaggcattgagctgatcctcagcacggaaattgtcaaggctgat 398 |||||||| | | ||||| || ||||||||||| ||||| |||||||||||||||||| Sbjct: 338 gaatggtattccgagaaaggtatcgagctgatcctgagcaccgaaattgtcaaggctgat 397 Query: 399 cttgcctctaagacattgaccagtgcagctggagcaaccttcacctatgagaccttgctc 458 |||||||| ||||||||||||||| |||||| |||||||| |||||||| || |||||| Sbjct: 398 cttgcctccaagacattgaccagttcagctgatgcaacctttacctatgacactttgctc 457 Query: 459 attgctactggctcctcgaccataaagctcactgactttggcgtccaaggagcaga 514 ||||| |||||||||||| ||||||||||||||||||||| || ||||||||||| Sbjct: 458 attgccactggctcctcggtcataaagctcactgactttggtgttcaaggagcaga 513
>dbj|AK102459.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033094C01, full insert sequence Length = 1720 Score = 460 bits (232), Expect = e-126 Identities = 370/416 (88%) Strand = Plus / Plus Query: 99 atggcgtccgagaagcacttcaagtacgtcatcctcggcggcggcgtcgcggcgggatac 158 |||||| ||| ||||||||||| ||||||||||||||||| |||||||| ||||||||| Sbjct: 98 atggcggccgcgaagcacttcacctacgtcatcctcggcggaggcgtcgccgcgggatac 157 Query: 159 gccgcgagggagttcggaaagcagggcgtccagcccggggagctcgccatcatctccaag 218 || ||| ||||||||| |||||||||||| |||||||||| |||||||||||||||||| Sbjct: 158 gctgcgcgggagttcgccaagcagggcgtcaagcccggggaactcgccatcatctccaag 217 Query: 219 gagtccgtggctccctatgagcgtcctgcactcagcaagggctacctctttccccagaat 278 || || ||||||||||| ||||||||||| ||||||||||| ||||||||||| |||||| Sbjct: 218 gaatcggtggctccctacgagcgtcctgctctcagcaagggatacctctttcctcagaat 277 Query: 279 gccgcgaggcttccaggattccacacctgcgtcgggagcggcggggagaagctcttgccc 338 || || || ||||| ||||||||||||||||||||||||||||| |||| ||||||||| Sbjct: 278 gcagccagacttccgggattccacacctgcgtcgggagcggcggagagaggctcttgcct 337 Query: 339 gaatggtacacacaaaaaggcattgagctgatcctcagcacggaaattgtcaaggctgat 398 |||||||| | | ||||| || ||||||||||| ||||| |||||||||||||||||| Sbjct: 338 gaatggtattccgagaaaggtatcgagctgatcctgagcaccgaaattgtcaaggctgat 397 Query: 399 cttgcctctaagacattgaccagtgcagctggagcaaccttcacctatgagaccttgctc 458 |||||||| ||||||||||||||| |||||| |||||||| |||||||| || |||||| Sbjct: 398 cttgcctccaagacattgaccagttcagctgatgcaacctttacctatgacactttgctc 457 Query: 459 attgctactggctcctcgaccataaagctcactgactttggcgtccaaggagcaga 514 ||||| |||||||||||| ||||||||||||||||||||| || ||||||||||| Sbjct: 458 attgccactggctcctcggtcataaagctcactgactttggtgttcaaggagcaga 513
>dbj|AB026731.1| Oryza sativa (japonica cultivar-group) mRNA for monodehydroascorbate reductase, partial cds Length = 1339 Score = 452 bits (228), Expect = e-124 Identities = 369/416 (88%) Strand = Plus / Plus Query: 99 atggcgtccgagaagcacttcaagtacgtcatcctcggcggcggcgtcgcggcgggatac 158 |||||| ||| ||||||||||| ||||||||||||||||| |||||||| ||||||||| Sbjct: 146 atggcggccgcgaagcacttcacctacgtcatcctcggcggaggcgtcgccgcgggatac 205 Query: 159 gccgcgagggagttcggaaagcagggcgtccagcccggggagctcgccatcatctccaag 218 || ||| ||||||||| |||||||||||| |||||||||| |||||||||||||||||| Sbjct: 206 gctgcgcgggagttcgccaagcagggcgtcaagcccggggaactcgccatcatctccaag 265 Query: 219 gagtccgtggctccctatgagcgtcctgcactcagcaagggctacctctttccccagaat 278 || || ||||||||||| ||||||||||| ||||||||||| ||||||||||| |||||| Sbjct: 266 gaatcggtggctccctacgagcgtcctgctctcagcaagggatacctctttcctcagaat 325 Query: 279 gccgcgaggcttccaggattccacacctgcgtcgggagcggcggggagaagctcttgccc 338 || || || ||||| ||||||||||||||||||||||||||||| |||| ||||||||| Sbjct: 326 gcagccagacttccgggattccacacctgcgtcgggagcggcggagagaggctcttgcct 385 Query: 339 gaatggtacacacaaaaaggcattgagctgatcctcagcacggaaattgtcaaggctgat 398 |||||||| | | ||||| || ||||||||||| ||||| |||||||||||||||||| Sbjct: 386 gaatggtattccgagaaaggtatcgagctgatcctgagcaccgaaattgtcaaggctgat 445 Query: 399 cttgcctctaagacattgaccagtgcagctggagcaaccttcacctatgagaccttgctc 458 |||||||| ||||||||||||||| |||||| |||||||| |||||||| || |||||| Sbjct: 446 cttgcctccaagacattgaccagttcagctgatgcaacctttacctatgacactttgctc 505 Query: 459 attgctactggctcctcgaccataaagctcactgactttggcgtccaaggagcaga 514 ||||| ||||||| |||| ||||||||||||||||||||| || ||||||||||| Sbjct: 506 attgccactggcttctcggtcataaagctcactgactttggtgttcaaggagcaga 561
>dbj|AK071558.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023100J06, full insert sequence Length = 1668 Score = 345 bits (174), Expect = 1e-91 Identities = 327/378 (86%) Strand = Plus / Plus Query: 98 gatggcgtccgagaagcacttcaagtacgtcatcctcggcggcggcgtcgcggcgggata 157 ||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 219 gatggcgtcggagaagcacttcaagtacgtcatcctcggcggcggcgtcgcagcgggata 278 Query: 158 cgccgcgagggagttcggaaagcagggcgtccagcccggggagctcgccatcatctccaa 217 || || ||||||||| |||||||| || |||| ||||||||||||||||||||||| Sbjct: 279 tgcggcacgggagttcgccaagcagggtgttaagccaggggagctcgccatcatctccaa 338 Query: 218 ggagtccgtggctccctatgagcgtcctgcactcagcaagggctacctctttccccagaa 277 |||| |||||||||| |||||||| ||||| ||||||||||| ||||||||||| ||||| Sbjct: 339 ggaggccgtggctccttatgagcgccctgctctcagcaagggatacctctttcctcagaa 398 Query: 278 tgccgcgaggcttccaggattccacacctgcgtcgggagcggcggggagaagctcttgcc 337 ||| || || || |||||||| || || ||||| || || || |||| ||| ||||| Sbjct: 399 tgctgcaagactcccaggatttcatgtgtgtgtcggcagtggaggagagaggcttttgcc 458 Query: 338 cgaatggtacacacaaaaaggcattgagctgatcctcagcacggaaattgtcaaggctga 397 |||||||||| || | |||||||||||| ||||||| ||||| ||||||||||| ||||| Sbjct: 459 cgaatggtactcagagaaaggcattgagttgatcctgagcactgaaattgtcaaagctga 518 Query: 398 tcttgcctctaagacattgaccagtgcagctggagcaaccttcacctatgagaccttgct 457 ||||||||| ||||| ||||| ||||||| |||||||||||| || ||||||| ||| | Sbjct: 519 tcttgcctccaagactttgactagtgcagttggagcaacctttacatatgagattttgat 578 Query: 458 cattgctactggctcctc 475 |||||| ||||||||||| Sbjct: 579 cattgcaactggctcctc 596
>gb|AY107597.1| Zea mays PCO071961 mRNA sequence Length = 1745 Score = 345 bits (174), Expect = 1e-91 Identities = 369/434 (85%) Strand = Plus / Plus Query: 113 gcacttcaagtacgtcatcctcggcggcggcgtcgcggcgggatacgccgcgagggagtt 172 |||||||||||||||||||||||||||||| ||||||||||| ||||| ||||||||||| Sbjct: 222 gcacttcaagtacgtcatcctcggcggcggtgtcgcggcggggtacgcggcgagggagtt 281 Query: 173 cggaaagcagggcgtccagcccggggagctcgccatcatctccaaggagtccgtggctcc 232 || |||||||||||| | ||||| ||||||||||||||||||||||| | ||||| || Sbjct: 282 cgccaagcagggcgtcaaccccggcgagctcgccatcatctccaaggaaccagtggcccc 341 Query: 233 ctatgagcgtcctgcactcagcaagggctacctctttccccagaatgccgcgaggcttcc 292 |||||||| ||||||||||||||||| |||||||| || ||||| || || || || || Sbjct: 342 ttatgagcgccctgcactcagcaagggatacctcttccctcagaacgctgcaagactgcc 401 Query: 293 aggattccacacctgcgtcgggagcggcggggagaagctcttgcccgaatggtacacaca 352 ||| |||||||| || || || ||||| || |||| || | || ||||||||| | | Sbjct: 402 aggcttccacacgtgtgtgggcagcggtggagagagactacttcctgaatggtactctga 461 Query: 353 aaaaggcattgagctgatcctcagcacggaaattgtcaaggctgatcttgcctctaagac 412 ||||||||||| |||||||| || || || ||||| ||||| || ||||| || ||||| Sbjct: 462 gaaaggcattgaactgatcctgagtactgagattgtgaaggccgaccttgcttcaaagac 521 Query: 413 attgaccagtgcagctggagcaaccttcacctatgagaccttgctcattgctactggctc 472 ||||||||||||||| | ||||||||| ||||||||||||||||||||||| ||||| Sbjct: 522 tctgaccagtgcagctgcggaaaccttcacatatgagaccttgctcattgctacgggctc 581 Query: 473 ctcgaccataaagctcactgactttggcgtccaaggagcagaatcagacaacatattgta 532 |||| ||||||||||||||| ||||| || |||||||||||||| ||||||||||||| Sbjct: 582 ctcggtcataaagctcactgattttggtgttcaaggagcagaatccaacaacatattgta 641 Query: 533 tctacgggaaattg 546 |||| |||| |||| Sbjct: 642 tctaagggacattg 655
>dbj|D85764.1| Oryza sativa (japonica cultivar-group) mRNA for cytosolic monodehydroascorbate reductase, complete cds Length = 1570 Score = 345 bits (174), Expect = 1e-91 Identities = 327/378 (86%) Strand = Plus / Plus Query: 98 gatggcgtccgagaagcacttcaagtacgtcatcctcggcggcggcgtcgcggcgggata 157 ||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 97 gatggcgtcggagaagcacttcaagtacgtcatcctcggcggcggcgtcgcagcgggata 156 Query: 158 cgccgcgagggagttcggaaagcagggcgtccagcccggggagctcgccatcatctccaa 217 || || ||||||||| |||||||| || |||| ||||||||||||||||||||||| Sbjct: 157 tgcggcacgggagttcgccaagcagggtgttaagccaggggagctcgccatcatctccaa 216 Query: 218 ggagtccgtggctccctatgagcgtcctgcactcagcaagggctacctctttccccagaa 277 |||| |||||||||| |||||||| ||||| ||||||||||| ||||||||||| ||||| Sbjct: 217 ggaggccgtggctccttatgagcgccctgctctcagcaagggatacctctttcctcagaa 276 Query: 278 tgccgcgaggcttccaggattccacacctgcgtcgggagcggcggggagaagctcttgcc 337 ||| || || || |||||||| || || ||||| || || || |||| ||| ||||| Sbjct: 277 tgctgcaagactcccaggatttcatgtgtgtgtcggcagtggaggagagaggcttttgcc 336 Query: 338 cgaatggtacacacaaaaaggcattgagctgatcctcagcacggaaattgtcaaggctga 397 |||||||||| || | |||||||||||| ||||||| ||||| ||||||||||| ||||| Sbjct: 337 cgaatggtactcagagaaaggcattgagttgatcctgagcactgaaattgtcaaagctga 396 Query: 398 tcttgcctctaagacattgaccagtgcagctggagcaaccttcacctatgagaccttgct 457 ||||||||| ||||| ||||| ||||||| |||||||||||| || ||||||| ||| | Sbjct: 397 tcttgcctccaagactttgactagtgcagttggagcaacctttacatatgagattttgat 456 Query: 458 cattgctactggctcctc 475 |||||| ||||||||||| Sbjct: 457 cattgcaactggctcctc 474
>gb|AY103967.1| Zea mays PCO066827 mRNA sequence Length = 1675 Score = 309 bits (156), Expect = 5e-81 Identities = 378/452 (83%) Strand = Plus / Plus Query: 99 atggcgtccgagaagcacttcaagtacgtcatcctcggcggcggcgtcgcggcgggatac 158 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 134 atggcgtccgaaaagcacttcaagtacgtcatcctcggcggcggcgtcgcggcggggtac 193 Query: 159 gccgcgagggagttcggaaagcagggcgtccagcccggggagctcgccatcatctccaag 218 || ||| ||||||||| |||||||| || |||| |||||||| || |||||||||||| Sbjct: 194 gcggcgcgggagttcgccaagcagggagttaagcctggggagcttgcaatcatctccaag 253 Query: 219 gagtccgtggctccctatgagcgtcctgcactcagcaagggctacctctttccccagaat 278 ||| | |||||||| || ||||||||||| || ||||| || ||||||||||| |||| Sbjct: 254 gaggctgtggctccttacgagcgtcctgccctaagcaaaggttacctctttcctacgaat 313 Query: 279 gccgcgaggcttccaggattccacacctgcgtcgggagcggcggggagaagctcttgccc 338 || || || || |||||||| | || || || || || || |||||||| ||||| Sbjct: 314 gctgcaagactcccaggattttatgtatgtgtgggaagtggtggagagaagctattgcct 373 Query: 339 gaatggtacacacaaaaaggcattgagctgatcctcagcacggaaattgtcaaggctgat 398 || |||||| || | |||||||||||||||||||| || || ||||||||||| |||||| Sbjct: 374 gagtggtactcagagaaaggcattgagctgatccttagtacagaaattgtcaaagctgat 433 Query: 399 cttgcctctaagacattgaccagtgcagctggagcaaccttcacctatgagaccttgctc 458 ||| || | ||||| |||| |||||||||||||||| ||| || ||||||| ||||||| Sbjct: 434 ctttccaccaagactctgactagtgcagctggagcaaactttacatatgagatcttgctc 493 Query: 459 attgctactggctcctcgaccataaagctcactgactttggcgtccaaggagcagaatca 518 |||||||||||||||||| |||||||||||| || |||||| |||||||| || || Sbjct: 494 attgctactggctcctcggtcataaagctcaccgattttggcacacaaggagctgattct 553 Query: 519 gacaacatattgtatctacgggaaattgatga 550 ||||||| | |||||| ||||||||||||| Sbjct: 554 aacaacattctatatctaagggaaattgatga 585
>emb|AJ234891.1|HVU234891 Hordeum vulgare genomic DNA fragment; clone MWG2304 Length = 351 Score = 159 bits (80), Expect = 1e-35 Identities = 81/82 (98%) Strand = Plus / Plus Query: 277 atgccgcgaggcttccaggattccacacctgcgtcgggagcggcggggagaagctcttgc 336 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 60 atgccgcgaggcttccaggattccacacctgcgtcgggagcsgcggggagaagctcttgc 119 Query: 337 ccgaatggtacacacaaaaagg 358 |||||||||||||||||||||| Sbjct: 120 ccgaatggtacacacaaaaagg 141
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 147 bits (74), Expect = 5e-32 Identities = 104/114 (91%) Strand = Plus / Plus Query: 363 gagctgatcctcagcacggaaattgtcaaggctgatcttgcctctaagacattgaccagt 422 ||||||||||| ||||| |||||||||||||||||||||||||| ||||||||||||||| Sbjct: 27893773 gagctgatcctgagcaccgaaattgtcaaggctgatcttgcctccaagacattgaccagt 27893832 Query: 423 gcagctggagcaaccttcacctatgagaccttgctcattgctactggctcctcg 476 |||||| |||||||| |||||||| || ||||||||||| |||||||||||| Sbjct: 27893833 tcagctgatgcaacctttacctatgacactttgctcattgccactggctcctcg 27893886 Score = 89.7 bits (45), Expect = 9e-15 Identities = 63/69 (91%) Strand = Plus / Plus Query: 152 gggatacgccgcgagggagttcggaaagcagggcgtccagcccggggagctcgccatcat 211 ||||||||| ||| ||||||||| |||||||||||| |||||||||| ||||||||||| Sbjct: 27892874 gggatacgctgcgcgggagttcgccaagcagggcgtcaagcccggggaactcgccatcat 27892933 Query: 212 ctccaagga 220 ||||||||| Sbjct: 27892934 ctccaagga 27892942 Score = 85.7 bits (43), Expect = 1e-13 Identities = 55/59 (93%) Strand = Plus / Plus Query: 288 cttccaggattccacacctgcgtcgggagcggcggggagaagctcttgcccgaatggta 346 ||||| ||||||||||||||||||||||||||||| |||| ||||||||| |||||||| Sbjct: 27893236 cttccgggattccacacctgcgtcgggagcggcggagagaggctcttgcctgaatggta 27893294 Score = 71.9 bits (36), Expect = 2e-09 Identities = 48/52 (92%) Strand = Plus / Plus Query: 225 gtggctccctatgagcgtcctgcactcagcaagggctacctctttccccaga 276 ||||||||||| ||||||||||| ||||||||||| ||||||||||| |||| Sbjct: 27893049 gtggctccctacgagcgtcctgctctcagcaagggatacctctttcctcaga 27893100 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 99 atggcgtccgagaagcacttcaagtacgtcatcctcggcggcggcgtcgcggcgg 153 |||||| ||| ||||||||||| ||||||||||||||||| |||||||| |||| Sbjct: 27892707 atggcggccgcgaagcacttcacctacgtcatcctcggcggaggcgtcgccgcgg 27892761 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 479 cataaagctcactgactttggcgtccaaggagcaga 514 ||||||||||||||||||||| || ||||||||||| Sbjct: 27894104 cataaagctcactgactttggtgttcaaggagcaga 27894139
>dbj|AP003928.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1150_A11 Length = 142010 Score = 147 bits (74), Expect = 5e-32 Identities = 104/114 (91%) Strand = Plus / Plus Query: 363 gagctgatcctcagcacggaaattgtcaaggctgatcttgcctctaagacattgaccagt 422 ||||||||||| ||||| |||||||||||||||||||||||||| ||||||||||||||| Sbjct: 101851 gagctgatcctgagcaccgaaattgtcaaggctgatcttgcctccaagacattgaccagt 101910 Query: 423 gcagctggagcaaccttcacctatgagaccttgctcattgctactggctcctcg 476 |||||| |||||||| |||||||| || ||||||||||| |||||||||||| Sbjct: 101911 tcagctgatgcaacctttacctatgacactttgctcattgccactggctcctcg 101964 Score = 89.7 bits (45), Expect = 9e-15 Identities = 63/69 (91%) Strand = Plus / Plus Query: 152 gggatacgccgcgagggagttcggaaagcagggcgtccagcccggggagctcgccatcat 211 ||||||||| ||| ||||||||| |||||||||||| |||||||||| ||||||||||| Sbjct: 100952 gggatacgctgcgcgggagttcgccaagcagggcgtcaagcccggggaactcgccatcat 101011 Query: 212 ctccaagga 220 ||||||||| Sbjct: 101012 ctccaagga 101020 Score = 85.7 bits (43), Expect = 1e-13 Identities = 55/59 (93%) Strand = Plus / Plus Query: 288 cttccaggattccacacctgcgtcgggagcggcggggagaagctcttgcccgaatggta 346 ||||| ||||||||||||||||||||||||||||| |||| ||||||||| |||||||| Sbjct: 101314 cttccgggattccacacctgcgtcgggagcggcggagagaggctcttgcctgaatggta 101372 Score = 71.9 bits (36), Expect = 2e-09 Identities = 48/52 (92%) Strand = Plus / Plus Query: 225 gtggctccctatgagcgtcctgcactcagcaagggctacctctttccccaga 276 ||||||||||| ||||||||||| ||||||||||| ||||||||||| |||| Sbjct: 101127 gtggctccctacgagcgtcctgctctcagcaagggatacctctttcctcaga 101178 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 99 atggcgtccgagaagcacttcaagtacgtcatcctcggcggcggcgtcgcggcgg 153 |||||| ||| ||||||||||| ||||||||||||||||| |||||||| |||| Sbjct: 100785 atggcggccgcgaagcacttcacctacgtcatcctcggcggaggcgtcgccgcgg 100839 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 479 cataaagctcactgactttggcgtccaaggagcaga 514 ||||||||||||||||||||| || ||||||||||| Sbjct: 102182 cataaagctcactgactttggtgttcaaggagcaga 102217
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 127 bits (64), Expect = 4e-26 Identities = 106/120 (88%) Strand = Plus / Plus Query: 356 aggcattgagctgatcctcagcacggaaattgtcaaggctgatcttgcctctaagacatt 415 |||||||||| ||||||| ||||| ||||||||||| |||||||||||||| ||||| || Sbjct: 22344898 aggcattgagttgatcctgagcactgaaattgtcaaagctgatcttgcctccaagacttt 22344957 Query: 416 gaccagtgcagctggagcaaccttcacctatgagaccttgctcattgctactggctcctc 475 ||| ||||||| |||||||||||| || ||||||| ||| ||||||| ||||||||||| Sbjct: 22344958 gactagtgcagttggagcaacctttacatatgagattttgatcattgcaactggctcctc 22345017 Score = 95.6 bits (48), Expect = 1e-16 Identities = 54/56 (96%) Strand = Plus / Plus Query: 98 gatggcgtccgagaagcacttcaagtacgtcatcctcggcggcggcgtcgcggcgg 153 ||||||||| ||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 22343507 gatggcgtcggagaagcacttcaagtacgtcatcctcggcggcggcgtcgcagcgg 22343562 Score = 65.9 bits (33), Expect = 1e-07 Identities = 54/61 (88%) Strand = Plus / Plus Query: 166 gggagttcggaaagcagggcgtccagcccggggagctcgccatcatctccaaggagtccg 225 ||||||||| |||||||| || |||| ||||||||||||||||||||||||||| ||| Sbjct: 22343802 gggagttcgccaagcagggtgttaagccaggggagctcgccatcatctccaaggaggccg 22343861 Query: 226 t 226 | Sbjct: 22343862 t 22343862 Score = 63.9 bits (32), Expect = 5e-07 Identities = 47/52 (90%) Strand = Plus / Plus Query: 225 gtggctccctatgagcgtcctgcactcagcaagggctacctctttccccaga 276 |||||||| |||||||| ||||| ||||||||||| ||||||||||| |||| Sbjct: 22344466 gtggctccttatgagcgccctgctctcagcaagggatacctctttcctcaga 22344517
>dbj|AP005558.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1155_H10 Length = 140475 Score = 127 bits (64), Expect = 4e-26 Identities = 106/120 (88%) Strand = Plus / Plus Query: 356 aggcattgagctgatcctcagcacggaaattgtcaaggctgatcttgcctctaagacatt 415 |||||||||| ||||||| ||||| ||||||||||| |||||||||||||| ||||| || Sbjct: 106906 aggcattgagttgatcctgagcactgaaattgtcaaagctgatcttgcctccaagacttt 106965 Query: 416 gaccagtgcagctggagcaaccttcacctatgagaccttgctcattgctactggctcctc 475 ||| ||||||| |||||||||||| || ||||||| ||| ||||||| ||||||||||| Sbjct: 106966 gactagtgcagttggagcaacctttacatatgagattttgatcattgcaactggctcctc 107025 Score = 95.6 bits (48), Expect = 1e-16 Identities = 54/56 (96%) Strand = Plus / Plus Query: 98 gatggcgtccgagaagcacttcaagtacgtcatcctcggcggcggcgtcgcggcgg 153 ||||||||| ||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 105515 gatggcgtcggagaagcacttcaagtacgtcatcctcggcggcggcgtcgcagcgg 105570 Score = 65.9 bits (33), Expect = 1e-07 Identities = 54/61 (88%) Strand = Plus / Plus Query: 166 gggagttcggaaagcagggcgtccagcccggggagctcgccatcatctccaaggagtccg 225 ||||||||| |||||||| || |||| ||||||||||||||||||||||||||| ||| Sbjct: 105810 gggagttcgccaagcagggtgttaagccaggggagctcgccatcatctccaaggaggccg 105869 Query: 226 t 226 | Sbjct: 105870 t 105870 Score = 63.9 bits (32), Expect = 5e-07 Identities = 47/52 (90%) Strand = Plus / Plus Query: 225 gtggctccctatgagcgtcctgcactcagcaagggctacctctttccccaga 276 |||||||| |||||||| ||||| ||||||||||| ||||||||||| |||| Sbjct: 106474 gtggctccttatgagcgccctgctctcagcaagggatacctctttcctcaga 106525
>gb|AY024075.1| Oryza sativa microsatellite MRG6400 containing (GATG)X6, closest to marker R662, genomic sequence Length = 224 Score = 89.7 bits (45), Expect = 9e-15 Identities = 63/69 (91%) Strand = Plus / Minus Query: 152 gggatacgccgcgagggagttcggaaagcagggcgtccagcccggggagctcgccatcat 211 ||||||||| ||| ||||||||| |||||||||||| |||||||||| ||||||||||| Sbjct: 203 gggatacgctgcgcgggagttcgccaagcagggcgtcaagcccggggaactcgccatcat 144 Query: 212 ctccaagga 220 ||||||||| Sbjct: 143 ctccaagga 135 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 225 gtggctccctatgagcgtcctgcactca 252 ||||||||||| ||||||||||| |||| Sbjct: 28 gtggctccctacgagcgtcctgctctca 1
>gb|AY039786.1| Brassica rapa subsp. pekinensis monodehydroascorbate reductase mRNA, complete cds Length = 1564 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 116 cttcaagtacgtcatcctcggcggcggcgtcgcggcgggatacgc 160 |||||||||| |||||||||||||||||||| | || |||||||| Sbjct: 50 cttcaagtacatcatcctcggcggcggcgtctcagccggatacgc 94 Score = 50.1 bits (25), Expect = 0.008 Identities = 46/53 (86%) Strand = Plus / Plus Query: 210 atctccaaggagtccgtggctccctatgagcgtcctgcactcagcaagggcta 262 |||||||| ||| | |||||||| ||||| |||||||| || ||||||||||| Sbjct: 144 atctccaaagaggcggtggctccttatgaacgtcctgctcttagcaagggcta 196
>ref|NM_115148.2| Arabidopsis thaliana disulfide oxidoreductase/ oxidoreductase AT3G52880 mRNA, complete cds Length = 1657 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 120 aagtacgtcatcctcggcggcggcgtcgcggcgggatacgc 160 |||||| |||||||||||||||||||| | || |||||||| Sbjct: 106 aagtacatcatcctcggcggcggcgtctctgccggatacgc 146
>gb|AY125492.1| Arabidopsis thaliana putative monodehydroascorbate reductase protein (At3g52880) mRNA, complete cds Length = 1557 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 120 aagtacgtcatcctcggcggcggcgtcgcggcgggatacgc 160 |||||| |||||||||||||||||||| | || |||||||| Sbjct: 71 aagtacatcatcctcggcggcggcgtctctgccggatacgc 111
>gb|AY091403.1| Arabidopsis thaliana putative monodehydroascorbate reductase (At3g52880) mRNA, complete cds Length = 1336 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 120 aagtacgtcatcctcggcggcggcgtcgcggcgggatacgc 160 |||||| |||||||||||||||||||| | || |||||||| Sbjct: 19 aagtacatcatcctcggcggcggcgtctctgccggatacgc 59
>gb|AY057576.1| Arabidopsis thaliana putative (NADH) monodehydroascorbate reductase (At3g52880) mRNA, complete cds Length = 1551 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 120 aagtacgtcatcctcggcggcggcgtcgcggcgggatacgc 160 |||||| |||||||||||||||||||| | || |||||||| Sbjct: 101 aagtacatcatcctcggcggcggcgtctctgccggatacgc 141
>gb|AF360197.1| Arabidopsis thaliana putative (NADH) monodehydroascorbate reductase (At3g52880) mRNA, complete cds Length = 1527 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 120 aagtacgtcatcctcggcggcggcgtcgcggcgggatacgc 160 |||||| |||||||||||||||||||| | || |||||||| Sbjct: 45 aagtacatcatcctcggcggcggcgtctctgccggatacgc 85
>gb|AY070718.1| Arabidopsis thaliana AT3g52880/F8J2_50 mRNA, complete cds Length = 1642 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 120 aagtacgtcatcctcggcggcggcgtcgcggcgggatacgc 160 |||||| |||||||||||||||||||| | || |||||||| Sbjct: 92 aagtacatcatcctcggcggcggcgtctctgccggatacgc 132
>gb|AY060525.1| Arabidopsis thaliana AT3g52880/F8J2_50 mRNA, complete cds Length = 1305 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 120 aagtacgtcatcctcggcggcggcgtcgcggcgggatacgc 160 |||||| |||||||||||||||||||| | || |||||||| Sbjct: 19 aagtacatcatcctcggcggcggcgtctctgccggatacgc 59
>gb|AY045666.1| Arabidopsis thaliana AT3g52880/F8J2_50 mRNA, complete cds Length = 1546 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 120 aagtacgtcatcctcggcggcggcgtcgcggcgggatacgc 160 |||||| |||||||||||||||||||| | || |||||||| Sbjct: 73 aagtacatcatcctcggcggcggcgtctctgccggatacgc 113
>emb|BX823908.1|CNS0A6NU Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS90ZG06 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1480 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 120 aagtacgtcatcctcggcggcggcgtcgcggcgggatacgc 160 |||||| |||||||||||||||||||| | || |||||||| Sbjct: 48 aagtacatcatcctcggcggcggcgtctctgccggatacgc 88
>gb|AY086968.1| Arabidopsis thaliana clone 30012 mRNA, complete sequence Length = 1575 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 120 aagtacgtcatcctcggcggcggcgtcgcggcgggatacgc 160 |||||| |||||||||||||||||||| | || |||||||| Sbjct: 106 aagtacatcatcctcggcggcggcgtctctgccggatacgc 146
>dbj|AB125637.1| Brassica oleracea BO-MDAR 2 mRNA for monodehydroascorbate reductase, complete cds Length = 1543 Score = 50.1 bits (25), Expect = 0.008 Identities = 40/45 (88%) Strand = Plus / Plus Query: 116 cttcaagtacgtcatcctcggcggcggcgtcgcggcgggatacgc 160 |||||| ||| |||||||||||||||| ||| |||| |||||||| Sbjct: 65 cttcaaatacatcatcctcggcggcggagtctcggccggatacgc 109
>gb|AY106646.1| Zea mays PCO091252 mRNA sequence Length = 1867 Score = 50.1 bits (25), Expect = 0.008 Identities = 49/57 (85%) Strand = Plus / Plus Query: 206 catcatctccaaggagtccgtggctccctatgagcgtcctgcactcagcaagggcta 262 |||||||||| | ||| |||| ||||| ||||| ||||||||||| ||||| ||||| Sbjct: 225 catcatctccgaagaggccgttgctccttatgaacgtcctgcactaagcaaaggcta 281 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Plus Query: 122 gtacgtcatcctcggcggcggcgtcgcggcgggatacgccgcg 164 |||||| ||||| ||||||||||| || ||||| ||||||||| Sbjct: 138 gtacgtgatcctgggcggcggcgtggccgcgggctacgccgcg 180
>ref|NM_120444.2| Arabidopsis thaliana disulfide oxidoreductase/ oxidoreductase AT5G03630 mRNA, complete cds Length = 1581 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 229 ctccctatgagcgtcctgcactcagcaaggg 259 |||| ||||||||||||||||| |||||||| Sbjct: 192 ctccatatgagcgtcctgcacttagcaaggg 222
>gb|AC134409.12| Mus musculus chromosome 5, clone RP24-355F10, complete sequence Length = 141528 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 24 tgtttcctccttcctcctcttcc 46 ||||||||||||||||||||||| Sbjct: 65368 tgtttcctccttcctcctcttcc 65390
>emb|AL162506.1|ATF17C15 Arabidopsis thaliana DNA chromosome 5, BAC clone F17C15 (ESSA project) Length = 102897 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Minus Query: 229 ctccctatgagcgtcctgcactcagcaaggg 259 |||| ||||||||||||||||| |||||||| Sbjct: 19444 ctccatatgagcgtcctgcacttagcaaggg 19414
>emb|AL132969.2|ATF8J2 Arabidopsis thaliana DNA chromosome 3, BAC clone F8J2 Length = 99814 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 120 aagtacgtcatcctcggcggcggcgtc 146 |||||| |||||||||||||||||||| Sbjct: 27728 aagtacatcatcctcggcggcggcgtc 27702
>gb|AY142000.1| Arabidopsis thaliana At5g03630/F17C15_50 mRNA, complete cds Length = 1308 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 229 ctccctatgagcgtcctgcactcagcaaggg 259 |||| ||||||||||||||||| |||||||| Sbjct: 131 ctccatatgagcgtcctgcacttagcaaggg 161
>gb|AF385629.1| Canis familiaris retinitis pigmentosa GTPase regulator (RPGR) gene, exon ORF15 and partial cds Length = 2816 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 28 tcctccttcctcctcttccccct 50 ||||||||||||||||||||||| Sbjct: 606 tcctccttcctcctcttccccct 584 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 30 ctccttcctcctcttccccct 50 ||||||||||||||||||||| Sbjct: 1267 ctccttcctcctcttccccct 1247
>gb|AY057628.1| Arabidopsis thaliana AT5g03630/F17C15_50 mRNA, complete cds Length = 1577 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 229 ctccctatgagcgtcctgcactcagcaaggg 259 |||| ||||||||||||||||| |||||||| Sbjct: 183 ctccatatgagcgtcctgcacttagcaaggg 213
>gb|AF428317.1|AF428317 Arabidopsis thaliana AT5g03630/F17C15_50 mRNA, complete cds Length = 1526 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 229 ctccctatgagcgtcctgcactcagcaaggg 259 |||| ||||||||||||||||| |||||||| Sbjct: 180 ctccatatgagcgtcctgcacttagcaaggg 210
>gb|AY087318.1| Arabidopsis thaliana clone 34156 mRNA, complete sequence Length = 1538 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 229 ctccctatgagcgtcctgcactcagcaaggg 259 |||| ||||||||||||||||| |||||||| Sbjct: 193 ctccatatgagcgtcctgcacttagcaaggg 223
>gb|AC137947.12| Mus musculus chromosome 5, clone RP23-362I3, complete sequence Length = 214295 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 24 tgtttcctccttcctcctcttcc 46 ||||||||||||||||||||||| Sbjct: 202109 tgtttcctccttcctcctcttcc 202131
>gb|L41345.1|TOMAFRR Lycopersicon esculentum ascorbate free radical reductase (AFRR), complete cds Length = 1709 Score = 46.1 bits (23), Expect = 0.12 Identities = 41/47 (87%) Strand = Plus / Plus Query: 225 gtggctccctatgagcgtcctgcactcagcaagggctacctctttcc 271 |||||||| ||||| ||||||||||| ||||||| ||||| ||||| Sbjct: 172 gtggctccttatgaacgtcctgcacttagcaaggcatacctttttcc 218
>gb|DQ214666.1| Taeniopygia guttata clone 0063P0005E12 brain protein 44-like variant 2-like mRNA, complete sequence Length = 1394 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 134 cggcggcggcgtcgcggcggga 155 |||||||||||||||||||||| Sbjct: 16 cggcggcggcgtcgcggcggga 37
>gb|DQ214665.1| Taeniopygia guttata clone 0058P0027B12 brain protein 44-like variant 1-like mRNA, complete sequence Length = 1398 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 134 cggcggcggcgtcgcggcggga 155 |||||||||||||||||||||| Sbjct: 11 cggcggcggcgtcgcggcggga 32
>gb|DQ214664.1| Taeniopygia guttata clone 0058P0027C10 brain protein 44-like variant 1-like mRNA, complete sequence Length = 1398 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 134 cggcggcggcgtcgcggcggga 155 |||||||||||||||||||||| Sbjct: 11 cggcggcggcgtcgcggcggga 32
>gb|DQ214663.1| Taeniopygia guttata clone 0063P0030E02 brain protein 44-like variant 1-like mRNA, complete sequence Length = 1401 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 134 cggcggcggcgtcgcggcggga 155 |||||||||||||||||||||| Sbjct: 13 cggcggcggcgtcgcggcggga 34
>gb|AE004237.1| Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, section 145 of 251 of the complete chromosome Length = 10594 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 350 acaaaaaggcattgagctgatc 371 |||||||||||||||||||||| Sbjct: 7137 acaaaaaggcattgagctgatc 7116
>emb|AL365444.11| Human DNA sequence from clone RP11-115P16 on chromosome 1 Contains the 3' UTR of a novel gene (DKFZp761P211), the ITPKB gene for inositol 1,4,5-trisphosphate 3-kinase B, two novel genes, a ribosomal protein S27 (metallopanstimulin 1) (RPS27) pseudogene and a CpG island, complete sequence Length = 181144 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 27 ttcctccttcctcctcttcccc 48 |||||||||||||||||||||| Sbjct: 132568 ttcctccttcctcctcttcccc 132589
>gb|AC160000.9| Mus musculus 6 BAC RP24-340J19 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 198476 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 30 ctccttcctcctcttccccctt 51 |||||||||||||||||||||| Sbjct: 115890 ctccttcctcctcttccccctt 115911
>gb|AC138117.4| Mus musculus BAC clone RP24-146K16 from chromosome 6, complete sequence Length = 230020 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 30 ctccttcctcctcttccccctt 51 |||||||||||||||||||||| Sbjct: 37656 ctccttcctcctcttccccctt 37677
>gb|AC109147.19| Mus musculus chromosome 8, clone RP23-341D16, complete sequence Length = 184600 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 31 tccttcctcctcttccccctt 51 ||||||||||||||||||||| Sbjct: 124744 tccttcctcctcttccccctt 124724
>gb|AC121560.17| Mus musculus chromosome 16, clone RP24-398G11, complete sequence Length = 189161 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 12 ctggaccatccttgtttcctc 32 ||||||||||||||||||||| Sbjct: 48520 ctggaccatccttgtttcctc 48500
>gb|AC159227.3| Mus musculus BAC clone RP24-334D12 from chromosome 12, complete sequence Length = 211971 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 204 gccatcatctccaaggagtcc 224 ||||||||||||||||||||| Sbjct: 60492 gccatcatctccaaggagtcc 60512
>gb|AC169512.1| Mus musculus BAC clone RP23-16A18 from chromosome 9, complete sequence Length = 201324 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 26 tttcctccttcctcctcttcc 46 ||||||||||||||||||||| Sbjct: 12811 tttcctccttcctcctcttcc 12831
>ref|XM_957827.1| Neurospora crassa OR74A hypothetical protein (NCU06204.1) partial mRNA Length = 1578 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 28 tcctccttcctcctcttcccc 48 ||||||||||||||||||||| Sbjct: 413 tcctccttcctcctcttcccc 393
>ref|XM_326058.1| Neurospora crassa OR74A hypothetical protein (NCU06204.1) partial mRNA Length = 1578 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 28 tcctccttcctcctcttcccc 48 ||||||||||||||||||||| Sbjct: 413 tcctccttcctcctcttcccc 393
>ref|NM_001034853.1| Homo sapiens retinitis pigmentosa GTPase regulator (RPGR), transcript variant C, mRNA Length = 4718 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 30 ctccttcctcctcttccccct 50 ||||||||||||||||||||| Sbjct: 3127 ctccttcctcctcttccccct 3107 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 30 ctccttcctcctcttccccct 50 ||||||||||||||||||||| Sbjct: 3055 ctccttcctcctcttccccct 3035 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 30 ctccttcctcctcttccccct 50 ||||||||||||||||||||| Sbjct: 3028 ctccttcctcctcttccccct 3008 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 30 ctccttcctcctcttccccct 50 ||||||||||||||||||||| Sbjct: 2980 ctccttcctcctcttccccct 2960 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 30 ctccttcctcctcttccccct 50 ||||||||||||||||||||| Sbjct: 2818 ctccttcctcctcttccccct 2798 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 30 ctccttcctcctcttccccct 50 ||||||||||||||||||||| Sbjct: 2731 ctccttcctcctcttccccct 2711
>gb|AC120408.7| Mus musculus chromosome 5, clone RP24-433N14, complete sequence Length = 178077 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 26 tttcctccttcctcctcttcc 46 ||||||||||||||||||||| Sbjct: 70877 tttcctccttcctcctcttcc 70857
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 28 tcctccttcctcctcttcccc 48 ||||||||||||||||||||| Sbjct: 10176627 tcctccttcctcctcttcccc 10176647 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 133 tcggcggcggcgtcgcggcg 152 |||||||||||||||||||| Sbjct: 17743591 tcggcggcggcgtcgcggcg 17743610 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 tcggcggcggcgtcgcggcg 152 |||||||||||||||||||| Sbjct: 12246475 tcggcggcggcgtcgcggcg 12246456
>gb|AC129603.3| Mus musculus BAC clone RP23-63E1 from 18, complete sequence Length = 175249 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 26 tttcctccttcctcctcttccccct 50 |||||||||||||| |||||||||| Sbjct: 85173 tttcctccttcctcatcttccccct 85149
>gb|AC157761.6| Mus musculus chromosome 5, clone RP23-446J15, complete sequence Length = 177868 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 26 tttcctccttcctcctcttcc 46 ||||||||||||||||||||| Sbjct: 53596 tttcctccttcctcctcttcc 53616
>emb|AL606748.9| Human DNA sequence from clone RP13-43E11 on chromosome Xp21.1-21.3 Contains the 5' end of the SRPX gene for a chromosome X sushi-repeat-containing protein, a novel gene, the RPGR gene for retinitis pigmentosa GTPase regulator, the 5' end of the OTC gene for ornithine carbamoyltransferase and two CpG islands, complete sequence Length = 141577 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 30 ctccttcctcctcttccccct 50 ||||||||||||||||||||| Sbjct: 73776 ctccttcctcctcttccccct 73796 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 30 ctccttcctcctcttccccct 50 ||||||||||||||||||||| Sbjct: 73689 ctccttcctcctcttccccct 73709 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 30 ctccttcctcctcttccccct 50 ||||||||||||||||||||| Sbjct: 73527 ctccttcctcctcttccccct 73547 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 30 ctccttcctcctcttccccct 50 ||||||||||||||||||||| Sbjct: 73479 ctccttcctcctcttccccct 73499 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 30 ctccttcctcctcttccccct 50 ||||||||||||||||||||| Sbjct: 73452 ctccttcctcctcttccccct 73472 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 30 ctccttcctcctcttccccct 50 ||||||||||||||||||||| Sbjct: 73380 ctccttcctcctcttccccct 73400
>emb|AL592148.7| Human DNA sequence from clone RP11-378J18 on chromosome 1 Contains the gene for a novel protein (FLJ13840), the TAF1A gene for TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa, two novel genes, the gene for C219-reactive peptide (FLJ39207), the 3' of the gene for a novel protein (FLJ12806) and a CpG island, complete sequence Length = 194034 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 28 tcctccttcctcctcttcccc 48 ||||||||||||||||||||| Sbjct: 52498 tcctccttcctcctcttcccc 52518
>emb|AJ556169.1|ACA556169 Aplysia californica mRNA for hemocyanin (hc gene) Length = 11468 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 427 ctggagcaaccttcacctatgagac 451 ||||||||| ||||||||||||||| Sbjct: 10394 ctggagcaagcttcacctatgagac 10418
>emb|AJ318463.1|HSA318463 Homo sapiens RPGR gene for retinitis pigmentosa GTPase regulator, exons 1-19 Length = 77581 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 30 ctccttcctcctcttccccct 50 ||||||||||||||||||||| Sbjct: 48195 ctccttcctcctcttccccct 48175 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 30 ctccttcctcctcttccccct 50 ||||||||||||||||||||| Sbjct: 48123 ctccttcctcctcttccccct 48103 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 30 ctccttcctcctcttccccct 50 ||||||||||||||||||||| Sbjct: 48096 ctccttcctcctcttccccct 48076 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 30 ctccttcctcctcttccccct 50 ||||||||||||||||||||| Sbjct: 48048 ctccttcctcctcttccccct 48028 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 30 ctccttcctcctcttccccct 50 ||||||||||||||||||||| Sbjct: 47886 ctccttcctcctcttccccct 47866 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 30 ctccttcctcctcttccccct 50 ||||||||||||||||||||| Sbjct: 47799 ctccttcctcctcttccccct 47779
>gb|AC007995.23| Mus musculus, clone RP23-266E9, complete sequence Length = 204193 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 26 tttcctccttcctcctcttccccct 50 |||||||||||||| |||||||||| Sbjct: 51190 tttcctccttcctcatcttccccct 51214
>emb|AL592215.12| Mouse DNA sequence from clone RP23-172P19 on chromosome 11 Contains two novel genes (4930452L02Rik and B430319H21Rik), the 3' end of the gene for a novel protein (1700019I23Rik), the gene for a novel protein (4933407G07Rik), the Pmp22 gene for peripheral myelin protein and a CpG island, complete sequence Length = 219468 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 29 cctccttcctcctcttccccc 49 ||||||||||||||||||||| Sbjct: 178890 cctccttcctcctcttccccc 178910
>emb|AL450321.15| Mouse DNA sequence from clone RP23-232M10 on chromosome 13 Contains a novel gene, a non-POU domain containing octamer-binding protein (Nono) pseudogene, a Sin3-associated polypeptide 18 (Sap18) pseudogene, the 5' end of a novel gene and a CpG island, complete sequence Length = 209175 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 27 ttcctccttcctcctcttccccctt 51 |||||||||||||||||||| |||| Sbjct: 58370 ttcctccttcctcctcttcctcctt 58346
>gb|AC158944.7| Mus musculus chromosome 5, clone RP23-260N17, complete sequence Length = 161487 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 31 tccttcctcctcttccccctt 51 ||||||||||||||||||||| Sbjct: 1639 tccttcctcctcttccccctt 1619
>gb|AY115556.1| Oryza sativa (indica cultivar-group) MADS-box protein FDRMADS3 mRNA, complete cds Length = 1008 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 28 tcctccttcctcctcttcccc 48 ||||||||||||||||||||| Sbjct: 37 tcctccttcctcctcttcccc 17
>gb|AC109823.4| Homo sapiens BAC clone RP11-663M18 from 4, complete sequence Length = 80208 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 18 catccttgtttcctccttcctcctc 42 |||||||| |||||||||||||||| Sbjct: 19432 catccttggttcctccttcctcctc 19408
>dbj|AK145203.1| Mus musculus mammary gland RCB-0527 Jyg-MC(B) cDNA, RIKEN full-length enriched library, clone:G930018P07 product:ankyrin repeat domain 3, full insert sequence Length = 3531 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 12 ctggaccatccttgtttcctc 32 ||||||||||||||||||||| Sbjct: 2425 ctggaccatccttgtttcctc 2445
>gb|AC092665.3| Homo sapiens BAC clone RP11-544B5 from 4, complete sequence Length = 138504 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 416 gaccagtgcagctggagcaac 436 ||||||||||||||||||||| Sbjct: 111036 gaccagtgcagctggagcaac 111056
>gb|AF396700.1|AF396700S1 Mus musculus Hermansky-Pudlak syndrome type-3 protein (Hps3) gene, exon 1 Length = 2461 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 31 tccttcctcctcttccccctt 51 ||||||||||||||||||||| Sbjct: 2287 tccttcctcctcttccccctt 2307 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 31 tccttcctcctcttccccctt 51 ||||||||||||||||||||| Sbjct: 1987 tccttcctcctcttccccctt 2007
>gb|AC139035.12| Mus musculus chromosome 5, clone RP23-348E9, complete sequence Length = 237627 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 31 tccttcctcctcttccccctt 51 ||||||||||||||||||||| Sbjct: 39378 tccttcctcctcttccccctt 39398
>gb|AF302127.3|AF302127 Mus musculus PKC-regulated kinase PKK mRNA, complete cds Length = 3559 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 12 ctggaccatccttgtttcctc 32 ||||||||||||||||||||| Sbjct: 2446 ctggaccatccttgtttcctc 2466
>emb|BX511060.7| Zebrafish DNA sequence from clone CH211-210L19 in linkage group 10, complete sequence Length = 139250 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 29 cctccttcctcctcttccccc 49 ||||||||||||||||||||| Sbjct: 86699 cctccttcctcctcttccccc 86679
>gb|AC116380.14| Mus musculus chromosome 1, clone RP23-6F21, complete sequence Length = 232429 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 31 tccttcctcctcttccccctt 51 ||||||||||||||||||||| Sbjct: 28432 tccttcctcctcttccccctt 28412
>gb|AC009852.9| Homo sapiens chromosome 15 clone RP11-402F9 map 15q15, complete sequence Length = 178660 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 30 ctccttcctcctcttccccct 50 ||||||||||||||||||||| Sbjct: 108719 ctccttcctcctcttccccct 108699
>gb|AC137072.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0045E22, from chromosome 3, complete sequence Length = 160920 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 28 tcctccttcctcctcttcccc 48 ||||||||||||||||||||| Sbjct: 38040 tcctccttcctcctcttcccc 38060
>dbj|AK077233.1| Mus musculus 11 days pregnant adult female ovary and uterus cDNA, RIKEN full-length enriched library, clone:5031407D20 product:ankyrin repeat domain 3, full insert sequence Length = 3741 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 12 ctggaccatccttgtttcctc 32 ||||||||||||||||||||| Sbjct: 2628 ctggaccatccttgtttcctc 2648
>gb|AF281817.1|AF281817 Tupaia herpesvirus strain 2, complete genome Length = 195859 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 134 cggcggcggcgtcgcggcggg 154 ||||||||||||||||||||| Sbjct: 140504 cggcggcggcgtcgcggcggg 140484
>tpg|BK005711.1| TPA: TPA_exp: Homo sapiens RPGR ORF15 isoform mRNA, complete cds, alternatively spliced Length = 4606 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 30 ctccttcctcctcttccccct 50 ||||||||||||||||||||| Sbjct: 3018 ctccttcctcctcttccccct 2998 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 30 ctccttcctcctcttccccct 50 ||||||||||||||||||||| Sbjct: 2946 ctccttcctcctcttccccct 2926 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 30 ctccttcctcctcttccccct 50 ||||||||||||||||||||| Sbjct: 2919 ctccttcctcctcttccccct 2899 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 30 ctccttcctcctcttccccct 50 ||||||||||||||||||||| Sbjct: 2871 ctccttcctcctcttccccct 2851 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 30 ctccttcctcctcttccccct 50 ||||||||||||||||||||| Sbjct: 2709 ctccttcctcctcttccccct 2689 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 30 ctccttcctcctcttccccct 50 ||||||||||||||||||||| Sbjct: 2622 ctccttcctcctcttccccct 2602
>gb|AC158369.4| Pan troglodytes BAC clone CH251-554F11 from chromosome unknown, complete sequence Length = 201901 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 30 ctccttcctcctcttccccct 50 ||||||||||||||||||||| Sbjct: 19283 ctccttcctcctcttccccct 19263
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 28 tcctccttcctcctcttcccc 48 ||||||||||||||||||||| Sbjct: 10174728 tcctccttcctcctcttcccc 10174748 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 133 tcggcggcggcgtcgcggcg 152 |||||||||||||||||||| Sbjct: 17737132 tcggcggcggcgtcgcggcg 17737151 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 tcggcggcggcgtcgcggcg 152 |||||||||||||||||||| Sbjct: 12243238 tcggcggcggcgtcgcggcg 12243219
>emb|AL772256.15| Mouse DNA sequence from clone RP23-141N19 on chromosome 2, complete sequence Length = 191321 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 26 tttcctccttcctcctcttcc 46 ||||||||||||||||||||| Sbjct: 182150 tttcctccttcctcctcttcc 182170
>gb|AC154717.2| Mus musculus BAC clone RP24-369E16 from chromosome 17, complete sequence Length = 159625 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 29 cctccttcctcctcttccccc 49 ||||||||||||||||||||| Sbjct: 58743 cctccttcctcctcttccccc 58723
>gb|AC154187.2| Mus musculus BAC clone RP24-444N2 from chromosome 17, complete sequence Length = 224908 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 29 cctccttcctcctcttccccc 49 ||||||||||||||||||||| Sbjct: 220835 cctccttcctcctcttccccc 220855
>gb|AC020763.6| Homo sapiens chromosome 16 clone RP11-394B2, complete sequence Length = 200838 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 27 ttcctccttcctcctcttccccctt 51 |||||||||||||||||||| |||| Sbjct: 128747 ttcctccttcctcctcttcctcctt 128771
>gb|AC074091.6| Homo sapiens BAC clone RP11-158I13 from 2, complete sequence Length = 204153 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 28 tcctccttcctcctcttcccc 48 ||||||||||||||||||||| Sbjct: 64108 tcctccttcctcctcttcccc 64088
>gb|AF286472.1|AF286471S2 Homo sapiens retinitis pigmentosa GTPase regulator (RPGR) gene, exon ORF15 partial cds Length = 2834 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 30 ctccttcctcctcttccccct 50 ||||||||||||||||||||| Sbjct: 1206 ctccttcctcctcttccccct 1186 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 30 ctccttcctcctcttccccct 50 ||||||||||||||||||||| Sbjct: 1134 ctccttcctcctcttccccct 1114 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 30 ctccttcctcctcttccccct 50 ||||||||||||||||||||| Sbjct: 1107 ctccttcctcctcttccccct 1087 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 30 ctccttcctcctcttccccct 50 ||||||||||||||||||||| Sbjct: 1059 ctccttcctcctcttccccct 1039 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 30 ctccttcctcctcttccccct 50 ||||||||||||||||||||| Sbjct: 897 ctccttcctcctcttccccct 877 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 30 ctccttcctcctcttccccct 50 ||||||||||||||||||||| Sbjct: 810 ctccttcctcctcttccccct 790
>gb|AY855163.1| Gorilla gorilla RPGR mRNA, partial cds Length = 1650 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 30 ctccttcctcctcttccccct 50 ||||||||||||||||||||| Sbjct: 1153 ctccttcctcctcttccccct 1133 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 30 ctccttcctcctcttccccct 50 ||||||||||||||||||||| Sbjct: 1126 ctccttcctcctcttccccct 1106 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 30 ctccttcctcctcttccccct 50 ||||||||||||||||||||| Sbjct: 1060 ctccttcctcctcttccccct 1040 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 30 ctccttcctcctcttccccct 50 ||||||||||||||||||||| Sbjct: 1033 ctccttcctcctcttccccct 1013 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 30 ctccttcctcctcttccccct 50 ||||||||||||||||||||| Sbjct: 985 ctccttcctcctcttccccct 965 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 30 ctccttcctcctcttccccct 50 ||||||||||||||||||||| Sbjct: 802 ctccttcctcctcttccccct 782
>gb|AY855162.1| Macaca mulatta RPGR mRNA, partial cds Length = 1684 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 30 ctccttcctcctcttccccct 50 ||||||||||||||||||||| Sbjct: 1162 ctccttcctcctcttccccct 1142 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 30 ctccttcctcctcttccccct 50 ||||||||||||||||||||| Sbjct: 937 ctccttcctcctcttccccct 917 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 30 ctccttcctcctcttccccct 50 ||||||||||||||||||||| Sbjct: 859 ctccttcctcctcttccccct 839 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 32 ccttcctcctcttccccctt 51 |||||||||||||||||||| Sbjct: 1097 ccttcctcctcttccccctt 1078
>gb|AC155842.4| Mus musculus 6 BAC RP24-122N23 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 177409 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 27 ttcctccttcctcctcttccccctt 51 |||||||||||||||||||| |||| Sbjct: 81684 ttcctccttcctcctcttcctcctt 81660
>gb|BC057871.1| Mus musculus receptor-interacting serine-threonine kinase 4, mRNA (cDNA clone MGC:67753 IMAGE:5294197), complete cds Length = 3558 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 12 ctggaccatccttgtttcctc 32 ||||||||||||||||||||| Sbjct: 2406 ctggaccatccttgtttcctc 2426
>gb|AC134339.6| Mus musculus BAC clone RP23-5F21 from 8, complete sequence Length = 229073 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 28 tcctccttcctcctcttcccc 48 ||||||||||||||||||||| Sbjct: 137572 tcctccttcctcctcttcccc 137552 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 28 tcctccttcctcctcttcccc 48 ||||||||||||||||||||| Sbjct: 137537 tcctccttcctcctcttcccc 137517
>gb|AC155268.1| Mus musculus BAC clone RP23-204K22 from 16, complete sequence Length = 218381 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 26 tttcctccttcctcctcttccccct 50 ||||||||||||||||| ||||||| Sbjct: 58161 tttcctccttcctcctcctccccct 58137
>gb|AC122122.14| Mus musculus chromosome 1, clone RP23-15D21, complete sequence Length = 204416 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 31 tccttcctcctcttccccctt 51 ||||||||||||||||||||| Sbjct: 182120 tccttcctcctcttccccctt 182100
>gb|AC154769.2| Mus musculus BAC clone RP24-447K12 from 17, complete sequence Length = 157247 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 31 tccttcctcctcttccccctt 51 ||||||||||||||||||||| Sbjct: 22780 tccttcctcctcttccccctt 22760
>gb|AC157500.1| Oryza sativa (japonica cultivar-group) BAC clone OSJNBb0056O04, from chromosome 4, complete sequence Length = 90825 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 134 cggcggcggcgtcgcggcggg 154 ||||||||||||||||||||| Sbjct: 10154 cggcggcggcgtcgcggcggg 10134
>emb|AL133316.5|CNS01DUR Human chromosome 14 DNA sequence Partial sequence from BAC C-2577N12 of library CalTech-D from chromosome 14 of Homo sapiens (Human), complete sequence Length = 158473 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 356 aggcattgagctgatcctcag 376 ||||||||||||||||||||| Sbjct: 71237 aggcattgagctgatcctcag 71257
>dbj|AP002800.4| Homo sapiens genomic DNA, chromosome 11 clone:RP11-832A4, complete sequence Length = 215441 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 27 ttcctccttcctcctcttccccctt 51 |||||||||||||||||||| |||| Sbjct: 27455 ttcctccttcctcctcttcctcctt 27479
>gb|AC105298.21| Mus musculus strain C57BL/6J chromosome 5 clone rp23-224j9, complete sequence Length = 258789 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 26 tttcctccttcctcctcttcc 46 ||||||||||||||||||||| Sbjct: 239353 tttcctccttcctcctcttcc 239373
>gb|AC174457.2| Mus musculus BAC clone RP23-405E15 from chromosome 9, complete sequence Length = 201451 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 26 tttcctccttcctcctcttcc 46 ||||||||||||||||||||| Sbjct: 110754 tttcctccttcctcctcttcc 110734
>gb|AC155254.1| Mus musculus BAC clone RP24-174G4 from 16, complete sequence Length = 170860 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 27 ttcctccttcctcctcttccccctt 51 ||||||||||| ||||||||||||| Sbjct: 117086 ttcctccttccacctcttccccctt 117062 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 27 ttcctccttcctcctcttccccctt 51 |||||||||||||||||||| |||| Sbjct: 116999 ttcctccttcctcctcttcctcctt 116975
>ref|NM_023663.3| Mus musculus receptor-interacting serine-threonine kinase 4 (Ripk4), mRNA Length = 3559 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 12 ctggaccatccttgtttcctc 32 ||||||||||||||||||||| Sbjct: 2446 ctggaccatccttgtttcctc 2466
>emb|AL132716.6|CNS01DTF Human chromosome 14 DNA sequence BAC R-1124A8 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 155619 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 356 aggcattgagctgatcctcag 376 ||||||||||||||||||||| Sbjct: 84510 aggcattgagctgatcctcag 84530
>gb|AC100269.7| Mus musculus chromosome 5, clone RP23-67B9, complete sequence Length = 237273 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 28 tcctccttcctcctcttccccctt 51 ||||||||||||||||||| |||| Sbjct: 167134 tcctccttcctcctcttcctcctt 167111
>ref|XM_511042.1| PREDICTED: Pan troglodytes similar to Nuclear transport factor 2 (NTF-2) (LOC454177), mRNA Length = 880 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 24 tgtttcctccttcctcctcttccc 47 ||||||||||| |||||||||||| Sbjct: 733 tgtttcctcctccctcctcttccc 756
>gb|AC169677.2| Mus musculus BAC clone RP23-442J18 from chromosome 8, complete sequence Length = 225815 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 486 ctcactgactttggcgtcca 505 |||||||||||||||||||| Sbjct: 38040 ctcactgactttggcgtcca 38059
>ref|XM_468789.1| Oryza sativa (japonica cultivar-group), mRNA Length = 918 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 tcggcggcggcgtcgcggcg 152 |||||||||||||||||||| Sbjct: 776 tcggcggcggcgtcgcggcg 757
>ref|XM_473271.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1074 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 tttcctccttcctcctcttc 45 |||||||||||||||||||| Sbjct: 544 tttcctccttcctcctcttc 525
>ref|NM_005796.1| Homo sapiens nuclear transport factor 2 (NUTF2), mRNA Length = 894 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 24 tgtttcctccttcctcctcttccc 47 ||||||||||| |||||||||||| Sbjct: 509 tgtttcctcctccctcctcttccc 532
>gb|AF114171.1| Sorghum bicolor BAC clone 25.M18, complete sequence Length = 183990 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 225 gtggctccctatgagcgtcc 244 |||||||||||||||||||| Sbjct: 144448 gtggctccctatgagcgtcc 144429
>gb|AF146793.2| Mus musculus Neuromedin U precursor (Nmu) gene, partial cds; PDCL2 (Pdcl2) gene, partial cds; CLOCK (Clock) gene, complete cds; TPARDL (Tpardl) gene, complete cds; and SRD5A2L (Srd5a2l) gene, complete cds Length = 204618 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 27 ttcctccttcctcctcttcc 46 |||||||||||||||||||| Sbjct: 202494 ttcctccttcctcctcttcc 202475
>gb|AC114459.6| Rattus norvegicus 4 BAC CH230-388N23 (Children's Hospital Oakland Research Institute) complete sequence Length = 190345 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 28 tcctccttcctcctcttccccctt 51 ||||||||||||||||||| |||| Sbjct: 13769 tcctccttcctcctcttcctcctt 13746
>gb|AC150751.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNOa0279P04, complete sequence Length = 32479 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 203 cgccatcatctccaaggagt 222 |||||||||||||||||||| Sbjct: 20607 cgccatcatctccaaggagt 20626
>gb|AC129931.19| Mus musculus chromosome 15, clone RP23-136I22, complete sequence Length = 186914 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 tcctccttcctcctcttccc 47 |||||||||||||||||||| Sbjct: 164018 tcctccttcctcctcttccc 163999
>ref|XM_362123.1| Magnaporthe grisea 70-15 hypothetical protein (MG04568.4) partial cds Length = 1236 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 131 cctcggcggcggcgtcgcgg 150 |||||||||||||||||||| Sbjct: 679 cctcggcggcggcgtcgcgg 660
>gb|AC147239.2| Mus musculus BAC clone RP23-386C10 from chromosome 5, complete sequence Length = 217470 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 27 ttcctccttcctcctcttcc 46 |||||||||||||||||||| Sbjct: 194141 ttcctccttcctcctcttcc 194122
>gb|AC120386.12| Mus musculus chromosome 9, clone RP24-294A16, complete sequence Length = 207310 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 30 ctccttcctcctcttccccc 49 |||||||||||||||||||| Sbjct: 157486 ctccttcctcctcttccccc 157505
>gb|AC115000.7| Mus musculus chromosome 1, clone RP24-103F2, complete sequence Length = 191603 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 27 ttcctccttcctcctcttccccct 50 |||||||| ||||||||||||||| Sbjct: 117275 ttcctcctccctcctcttccccct 117252
>gb|AC159964.5| Mus musculus chromosome 1, clone RP24-321N12, complete sequence Length = 179413 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 31 tccttcctcctcttccccct 50 |||||||||||||||||||| Sbjct: 171734 tccttcctcctcttccccct 171753
>ref|XM_847520.1| PREDICTED: Canis familiaris similar to phosphoprotein enriched in astrocytes 15 (predicted) (LOC610113), mRNA Length = 2310 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 31 tccttcctcctcttccccct 50 |||||||||||||||||||| Sbjct: 2095 tccttcctcctcttccccct 2076
>gb|AC113454.8| Mus musculus chromosome 3, clone RP24-176I19, complete sequence Length = 171480 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 ttcctccttcctcctcttcc 46 |||||||||||||||||||| Sbjct: 55291 ttcctccttcctcctcttcc 55310
>gb|AC126944.3| Mus musculus BAC clone RP23-19A4 from chromosome 19, complete sequence Length = 184164 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 27 ttcctccttcctcctcttcc 46 |||||||||||||||||||| Sbjct: 147629 ttcctccttcctcctcttcc 147610
>gb|BC060639.1| Mus musculus rho/rac guanine nucleotide exchange factor (GEF) 18, mRNA (cDNA clone MGC:79199 IMAGE:6849875), complete cds Length = 3568 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 486 ctcactgactttggcgtcca 505 |||||||||||||||||||| Sbjct: 1044 ctcactgactttggcgtcca 1025
>gb|AC131717.3| Mus musculus chromosome 12 clone RP23-167A18, complete sequence Length = 190372 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 26 tttcctccttcctcctcttc 45 |||||||||||||||||||| Sbjct: 140177 tttcctccttcctcctcttc 140196
>gb|AC102352.9| Mus musculus chromosome 14, clone RP23-30H7, complete sequence Length = 248441 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 ttcctccttcctcctcttcc 46 |||||||||||||||||||| Sbjct: 60657 ttcctccttcctcctcttcc 60676
>gb|AC139934.9| Mus musculus chromosome 12, clone RP23-39G14, complete sequence Length = 312488 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 26 tttcctccttcctcctcttc 45 |||||||||||||||||||| Sbjct: 238595 tttcctccttcctcctcttc 238614
>gb|AC132319.3| Mus musculus BAC clone RP24-258I12 from chromosome 19, complete sequence Length = 193053 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 27 ttcctccttcctcctcttcc 46 |||||||||||||||||||| Sbjct: 26021 ttcctccttcctcctcttcc 26002
>gb|AC129020.4| Mus musculus BAC clone RP23-234A5 from chromosome 16, complete sequence Length = 192668 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 ttcctccttcctcctcttcc 46 |||||||||||||||||||| Sbjct: 88737 ttcctccttcctcctcttcc 88756
>gb|AC132612.3| Mus musculus BAC clone RP23-388L8 from chromosome 17, complete sequence Length = 203810 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 27 ttcctccttcctcctcttccccct 50 ||||||||||||||||||| |||| Sbjct: 129493 ttcctccttcctcctcttcaccct 129516
>gb|AC007789.1| Oryza sativa BAC OSJNBa0049B20 genomic sequence, complete sequence Length = 182756 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 132 ctcggcggcggcgtcgcggcggga 155 |||||||||||||||||| ||||| Sbjct: 34478 ctcggcggcggcgtcgcgccggga 34455
>gb|AC102573.10| Mus musculus chromosome 1, clone RP23-237L7, complete sequence Length = 185146 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 ttcctccttcctcctcttcc 46 |||||||||||||||||||| Sbjct: 163198 ttcctccttcctcctcttcc 163217 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 ttcctccttcctcctcttcc 46 |||||||||||||||||||| Sbjct: 163136 ttcctccttcctcctcttcc 163155
>gb|AC116596.3| Mus musculus BAC clone RP24-335P21 from chromosome 15, complete sequence Length = 165103 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 ctccttcctcctcttccccc 49 |||||||||||||||||||| Sbjct: 126191 ctccttcctcctcttccccc 126172
>gb|AC124404.4| Mus musculus BAC clone RP24-371M10 from chromosome 12, complete sequence Length = 150375 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 tcctccttcctcctcttccc 47 |||||||||||||||||||| Sbjct: 38886 tcctccttcctcctcttccc 38905
>emb|Z68879.1|CEK08F4 Caenorhabditis elegans Cosmid K08F4, complete sequence Length = 25433 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 18 catccttgtttcctccttcctcct 41 ||||||| |||||||||||||||| Sbjct: 14690 catccttctttcctccttcctcct 14713
>gb|AC132133.1| Mus musculus BAC clone RP23-242A12 from 17, complete sequence Length = 174152 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 27 ttcctccttcctcctcttccccct 50 ||||||||||||||||||| |||| Sbjct: 11539 ttcctccttcctcctcttcaccct 11562
>gb|AC110508.8| Mus musculus chromosome 3, clone RP23-382L1, complete sequence Length = 224790 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 27 ttcctccttcctcctcttcc 46 |||||||||||||||||||| Sbjct: 124140 ttcctccttcctcctcttcc 124121
>gb|AC121998.2| Mus musculus BAC clone RP24-318H5 from 2, complete sequence Length = 135317 Score = 40.1 bits (20), Expect = 7.6 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 28 tcctccttcctcctcttcccccttgctc 55 ||||||||| |||||||||||||||||| Sbjct: 53029 tcctccttc-tcctcttcccccttgctc 53055
>gb|AC133398.4| Oryza sativa chromosome 3 BAC OSJNBa0083F15 genomic sequence, complete sequence Length = 136916 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 tcggcggcggcgtcgcggcg 152 |||||||||||||||||||| Sbjct: 40416 tcggcggcggcgtcgcggcg 40397
>gb|AC115785.9| Mus musculus chromosome 12, clone RP23-170K17, complete sequence Length = 261721 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 26 tttcctccttcctcctcttc 45 |||||||||||||||||||| Sbjct: 44808 tttcctccttcctcctcttc 44827
>gb|AC165241.2| Mus musculus chromosome 1, clone wi1-856C11, complete sequence Length = 43938 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 31 tccttcctcctcttccccct 50 |||||||||||||||||||| Sbjct: 20193 tccttcctcctcttccccct 20212
>gb|AC103849.3| Homo sapiens chromosome 8, clone RP11-75H14, complete sequence Length = 147107 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 28 tcctccttcctcctcttccccctt 51 ||||||||||||||||||| |||| Sbjct: 82946 tcctccttcctcctcttcctcctt 82923
>emb|AL606527.6| Human DNA sequence from clone RP11-454G24 on chromosome 1 Contains a alcohol dehydrogenase 5 (class III) chi polypeptide (ADH5) pseudogene, complete sequence Length = 179964 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 27 ttcctccttcctcctcttcc 46 |||||||||||||||||||| Sbjct: 162117 ttcctccttcctcctcttcc 162098
>emb|AL512378.7| Human DNA sequence from clone RP1-34L19 on chromosome 6 Contains a CHC1 pseudogene and a high mobility group protein pseudogene, complete sequence Length = 66585 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 16 accatccttgtttcctccttcctc 39 |||||||||||||||||| ||||| Sbjct: 49071 accatccttgtttcctccctcctc 49048
>gb|AC095390.9| Rattus norvegicus 12 BAC CH230-7C24 (Children's Hospital Oakland Research Institute) complete sequence Length = 226532 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 ttcctccttcctcctcttcc 46 |||||||||||||||||||| Sbjct: 132180 ttcctccttcctcctcttcc 132199
>emb|AL139086.12| Human DNA sequence from clone RP11-494P5 on chromosome 13q33.3-34 Contains the 3' end of the ARHGEF7 gene for Rho guanine nucleotide exchange factor (GEF) 7 (KIAA0412), the 5' end of a novel gene (MGC35196) and a CpG island, complete sequence Length = 85339 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 tcctccttcctcctcttccc 47 |||||||||||||||||||| Sbjct: 25317 tcctccttcctcctcttccc 25336
>emb|AL109926.9|HSDJ543C6 Human DNA sequence from clone RP4-543C6 on chromosome 1p31.2-32.1 Contains part of the PDE4B gene for phosphodiesterase 4B, cAMP-specific (phosphodiesterase E4 dunce homolog, Drosophila), complete sequence Length = 114298 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 495 tttggcgtccaaggagcagaatca 518 |||||||||| ||||||||||||| Sbjct: 92874 tttggcgtcctaggagcagaatca 92851
>emb|AL031283.26|HS467K16 Human DNA sequence from clone RP3-467K16 on chromosome 1p36.11-36.23 Contains the 3' end of the gene for a novel protein (FLJ25234, KIAA1937, FLJ36564, FLJ39642, FLJ35981), three novel genes, the gene for a novel EF Hand domain-containing protein (MGC4342), the CTRC gene for chymotrypsin C (caldecrin) and a CpG island, complete sequence Length = 175964 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 tcctccttcctcctcttccc 47 |||||||||||||||||||| Sbjct: 53017 tcctccttcctcctcttccc 52998
>emb|AL033403.1|HS88D7 Human DNA sequence from clone RP6-88D7 on chromosome Xq25-26.3 Contains the F9 gene for F9: coagulation factor IX (plasma thromboplastic component, Christmas disease, hemophilia B) (FIX, PTC, HEMB) and the 3' end of the MCF2 gene for MCF.2 cell line derived transforming sequence (DBL), complete sequence Length = 158557 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 32 ccttcctcctcttccccctt 51 |||||||||||||||||||| Sbjct: 96913 ccttcctcctcttccccctt 96894
>emb|AL939125.1|SCO939125 Streptomyces coelicolor A3(2) complete genome; segment 22/29 Length = 295150 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 101 ggcgtccgagaagcacttcaagtacgtc 128 ||||||||||||| ||||| |||||||| Sbjct: 236554 ggcgtccgagaagaacttcgagtacgtc 236527
>emb|AL731624.3|OSJN00266 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0091C07, complete sequence Length = 138383 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 130 tcctcggcggcggcgtcgcggcgg 153 ||||||||||||||| |||||||| Sbjct: 60861 tcctcggcggcggcggcgcggcgg 60838
>emb|AL662984.3|OSJN00183 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0081C01, complete sequence Length = 140454 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 26 tttcctccttcctcctcttc 45 |||||||||||||||||||| Sbjct: 38063 tttcctccttcctcctcttc 38082
>emb|AL589701.9| Mouse DNA sequence from clone RP23-202F3 on chromosome 13 Contains a novel gene and the 3' end of a novel gene (1190005B03Rik), complete sequence Length = 219200 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 28 tcctccttcctcctcttccccctt 51 ||||||||||||||||||| |||| Sbjct: 61463 tcctccttcctcctcttcctcctt 61486
>gb|AC163296.2| Mus musculus BAC clone RP23-135F1 from chromosome 12, complete sequence Length = 226483 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 tcctccttcctcctcttccc 47 |||||||||||||||||||| Sbjct: 8548 tcctccttcctcctcttccc 8567
>emb|AL662921.10| Mouse DNA sequence from clone RP23-397K10 on chromosome 11 Contains a CpG island, complete sequence Length = 141754 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 32 ccttcctcctcttccccctt 51 |||||||||||||||||||| Sbjct: 25815 ccttcctcctcttccccctt 25796
>emb|AL662891.9| Mouse DNA sequence from clone RP23-20N14 on chromosome 11 Contains the Psme4 gene for proteasome (prosome, macropain) activator subunit 4, the Gpr75 gene for G protein-coupled receptor 75, a novel pseudogene, a PDZ and LIM domain 1 (elfin) (Pdlim1) pseudogene, two novel genes, the 5' end of the Asb3 gene for ankyrin repeat and SOCS box-containing protein 3, a methyl-CpG binding domain protein 2 interacting protein (Mbdin) pseudogene and a CpG island, complete sequence Length = 244971 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 28 tcctccttcctcctcttccccctt 51 ||||||||||||||||||| |||| Sbjct: 51328 tcctccttcctcctcttcctcctt 51351
>emb|AL604002.8| Mouse DNA sequence from clone RP23-386F6 on chromosome 11, complete sequence Length = 142134 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 29 cctccttcctcctcttcccc 48 |||||||||||||||||||| Sbjct: 81389 cctccttcctcctcttcccc 81370
>gb|AC163642.3| Mus musculus BAC clone RP24-456N17 from chromosome 5, complete sequence Length = 204856 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 350 acaaaaaggcattgagctga 369 |||||||||||||||||||| Sbjct: 41737 acaaaaaggcattgagctga 41718
>emb|CR859788.1| Pongo pygmaeus mRNA; cDNA DKFZp468O049 (from clone DKFZp468O049) Length = 943 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 24 tgtttcctccttcctcctcttccc 47 ||||||||||| |||||||||||| Sbjct: 490 tgtttcctcctccctcctcttccc 513
>gb|AE006465.1| Homo sapiens 16p13.3 sequence section 4 of 8 Length = 278911 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 238 agcgtcctgcactcagcaag 257 |||||||||||||||||||| Sbjct: 268031 agcgtcctgcactcagcaag 268012
>gb|AC092323.3| Homo sapiens chromosome 16 clone RP11-133B5, complete sequence Length = 173189 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 28 tcctccttcctcctcttccccctt 51 ||||||||||||||||||| |||| Sbjct: 85007 tcctccttcctcctcttcctcctt 85030
>dbj|AP003074.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0004G10 Length = 150379 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 132 ctcggcggcggcgtcgcggcggga 155 |||||||||||||||||| ||||| Sbjct: 67015 ctcggcggcggcgtcgcgccggga 66992
>gb|AC007716.8| Homo sapiens chromosome , clone RP11-94O8, complete sequence Length = 166759 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 24 tgtttcctccttcctcctcttccc 47 ||||||||||| |||||||||||| Sbjct: 124689 tgtttcctcctccctcctcttccc 124666
>ref|NM_001037624.1| Bos taurus nuclear transport factor 2 (NUTF2), mRNA Length = 940 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 24 tgtttcctccttcctcctcttccc 47 ||||||||||| |||||||||||| Sbjct: 501 tgtttcctcctccctcctcttccc 524
>gb|AY121620.1| Drosophila melanogaster GH06739 full insert cDNA Length = 4683 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 124 acgtcatcctcggcggcggcgtcg 147 |||||||| ||||||||||||||| Sbjct: 3380 acgtcatcttcggcggcggcgtcg 3403
>emb|CR621534.1| full-length cDNA clone CS0DI061YF17 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 2071 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 24 tgtttcctccttcctcctcttccc 47 ||||||||||| |||||||||||| Sbjct: 480 tgtttcctcctccctcctcttccc 503
>emb|CR621393.1| full-length cDNA clone CS0DJ008YC04 of T cells (Jurkat cell line) Cot 10-normalized of Homo sapiens (human) Length = 887 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 24 tgtttcctccttcctcctcttccc 47 ||||||||||| |||||||||||| Sbjct: 510 tgtttcctcctccctcctcttccc 533
>emb|CR613501.1| full-length cDNA clone CS0DC018YD19 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1301 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 24 tgtttcctccttcctcctcttccc 47 ||||||||||| |||||||||||| Sbjct: 361 tgtttcctcctccctcctcttccc 384
>emb|CR611844.1| full-length cDNA clone CS0DL007YO12 of B cells (Ramos cell line) Cot 25-normalized of Homo sapiens (human) Length = 1409 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 24 tgtttcctccttcctcctcttccc 47 ||||||||||| |||||||||||| Sbjct: 487 tgtttcctcctccctcctcttccc 510
>emb|CR610795.1| full-length cDNA clone CS0DF038YO18 of Fetal brain of Homo sapiens (human) Length = 1842 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 24 tgtttcctccttcctcctcttccc 47 ||||||||||| |||||||||||| Sbjct: 214 tgtttcctcctccctcctcttccc 237
>emb|CR605590.1| full-length cDNA clone CS0DB003YI04 of Neuroblastoma Cot 10-normalized of Homo sapiens (human) Length = 882 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 24 tgtttcctccttcctcctcttccc 47 ||||||||||| |||||||||||| Sbjct: 498 tgtttcctcctccctcctcttccc 521
>emb|CR601661.1| full-length cDNA clone CS0DC003YO24 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 459 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 24 tgtttcctccttcctcctcttccc 47 ||||||||||| |||||||||||| Sbjct: 90 tgtttcctcctccctcctcttccc 113
>emb|CR598520.1| full-length cDNA clone CS0DD006YF14 of Neuroblastoma Cot 50-normalized of Homo sapiens (human) Length = 810 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 24 tgtttcctccttcctcctcttccc 47 ||||||||||| |||||||||||| Sbjct: 440 tgtttcctcctccctcctcttccc 463
>gb|AC055761.11| Homo sapiens 3 BAC RP11-73L6 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 148114 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 32 ccttcctcctcttccccctt 51 |||||||||||||||||||| Sbjct: 20543 ccttcctcctcttccccctt 20524
>gb|AC093431.2| Homo sapiens chromosome 1 clone RP11-574N2, complete sequence Length = 164454 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 ttcctccttcctcctcttcc 46 |||||||||||||||||||| Sbjct: 17840 ttcctccttcctcctcttcc 17859
>dbj|AP007161.1| Aspergillus oryzae RIB40 genomic DNA, SC012 Length = 2668010 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 28 tcctccttcctcctcttccccctt 51 ||||| |||||||||||||||||| Sbjct: 1361241 tcctctttcctcctcttccccctt 1361218
>ref|NM_166318.1| Drosophila melanogaster CG15105-RB, transcript variant B (CG15105), mRNA Length = 4681 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 124 acgtcatcctcggcggcggcgtcg 147 |||||||| ||||||||||||||| Sbjct: 3398 acgtcatcttcggcggcggcgtcg 3421
>ref|NM_137546.2| Drosophila melanogaster CG15105-RA, transcript variant A (CG15105), mRNA Length = 4538 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 124 acgtcatcctcggcggcggcgtcg 147 |||||||| ||||||||||||||| Sbjct: 3255 acgtcatcttcggcggcggcgtcg 3278
>gb|AC023464.11| Homo sapiens chromosome 8, clone RP11-436D19, complete sequence Length = 160370 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 28 tcctccttcctcctcttccccctt 51 ||||||||||||||||||| |||| Sbjct: 10950 tcctccttcctcctcttcctcctt 10927
>dbj|AK147923.1| Mus musculus melanocyte cDNA, RIKEN full-length enriched library, clone:G270102D13 product:rho/rac guanine nucleotide exchange factor (GEF) 18, full insert sequence Length = 3745 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 486 ctcactgactttggcgtcca 505 |||||||||||||||||||| Sbjct: 1043 ctcactgactttggcgtcca 1024
>gb|AC091654.4| Homo sapiens BAC clone RP11-177C9 from 7, complete sequence Length = 116507 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 30 ctccttcctcctcttccccc 49 |||||||||||||||||||| Sbjct: 72190 ctccttcctcctcttccccc 72209
>gb|AC093302.2| Homo sapiens chromosome 5 clone RP11-60A8, complete sequence Length = 179385 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 ttcctccttcctcctcttcc 46 |||||||||||||||||||| Sbjct: 114833 ttcctccttcctcctcttcc 114852
>gb|AC115007.6| Mus musculus chromosome 5, clone RP24-188P11, complete sequence Length = 155084 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 28 tcctccttcctcctcttccccctt 51 ||||||||||||||||||| |||| Sbjct: 54879 tcctccttcctcctcttcctcctt 54856
>gb|BC109983.1| Bos taurus cDNA clone MGC:134045 IMAGE:8048348, complete cds Length = 940 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 24 tgtttcctccttcctcctcttccc 47 ||||||||||| |||||||||||| Sbjct: 501 tgtttcctcctccctcctcttccc 524
>ref|NM_069444.2| Caenorhabditis elegans K08F4.5 (K08F4.5) mRNA, complete cds Length = 784 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 18 catccttgtttcctccttcctcct 41 ||||||| |||||||||||||||| Sbjct: 412 catccttctttcctccttcctcct 389
>dbj|AK041423.1| Mus musculus 3 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A630008H02 product:hypothetical Dbl domain (dbl/cdc24 rhoGEF family) containing protein, full insert sequence Length = 3844 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 486 ctcactgactttggcgtcca 505 |||||||||||||||||||| Sbjct: 1075 ctcactgactttggcgtcca 1056
>dbj|AK011186.1| Mus musculus 10 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2600011L02 product:unclassifiable, full insert sequence Length = 2774 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 ctccttcctcctcttccccc 49 |||||||||||||||||||| Sbjct: 2221 ctccttcctcctcttccccc 2202
>gb|AC008188.4|AC008188 Drosophila melanogaster, chromosome 2R, region 56A2-56B1, BAC clone BACR08I18, complete sequence Length = 160650 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 124 acgtcatcctcggcggcggcgtcg 147 |||||||| ||||||||||||||| Sbjct: 102126 acgtcatcttcggcggcggcgtcg 102149
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 26 tttcctccttcctcctcttc 45 |||||||||||||||||||| Sbjct: 26501176 tttcctccttcctcctcttc 26501195 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 130 tcctcggcggcggcgtcgcggcgg 153 ||||||||||||||| |||||||| Sbjct: 16810430 tcctcggcggcggcggcgcggcgg 16810407
>gb|AC009041.10| Homo sapiens chromosome 16 clone RP11-161M6, complete sequence Length = 162342 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 238 agcgtcctgcactcagcaag 257 |||||||||||||||||||| Sbjct: 124059 agcgtcctgcactcagcaag 124040
>gb|AF312033.1|AF312033 Mus musculus acetylcholinesterase (Ache) and D5Ertd655e genes, complete cds; ASR2 (Asr2) gene, complete cds, alternatively spliced; TRIP6 (Trip6), CIP1 (Cip1), EPHB4 (Ephb4), ZAN (Zan), EPO (Epo), RPP20 (Rpp20), PERQ1 (Perq1), GNB2 (Gnb2), and BAF53B (Baf53b) genes, complete cds; and TFR2 (Tfr2) gene, partial cds Length = 296820 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 cctcctcttcccccttgctc 55 |||||||||||||||||||| Sbjct: 16292 cctcctcttcccccttgctc 16273
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 133 tcggcggcggcgtcgcggcg 152 |||||||||||||||||||| Sbjct: 8051456 tcggcggcggcgtcgcggcg 8051475
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 132 ctcggcggcggcgtcgcggcggga 155 |||||||||||||||||| ||||| Sbjct: 8070364 ctcggcggcggcgtcgcgccggga 8070341
>gb|AC040162.5| Homo sapiens chromosome 16 clone CTC-479C5, complete sequence Length = 217470 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 24 tgtttcctccttcctcctcttccc 47 ||||||||||| |||||||||||| Sbjct: 144938 tgtttcctcctccctcctcttccc 144915
>gb|AC158122.6| Mus musculus chromosome 15, clone RP24-174O10, complete sequence Length = 162305 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 tcctccttcctcctcttccc 47 |||||||||||||||||||| Sbjct: 125356 tcctccttcctcctcttccc 125375
>gb|AC083817.19|AC083817 Mus musculus 1 BAC RP23-470G12 (Roswell Park Cancer Institute Mouse BAC) complete sequence Length = 204950 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 27 ttcctccttcctcctcttcc 46 |||||||||||||||||||| Sbjct: 126989 ttcctccttcctcctcttcc 126970 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 27 ttcctccttcctcctcttcc 46 |||||||||||||||||||| Sbjct: 126927 ttcctccttcctcctcttcc 126908
>gb|AC012449.7| Homo sapiens BAC clone RP11-321K13 from 2, complete sequence Length = 109335 Score = 40.1 bits (20), Expect = 7.6 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Plus Query: 20 tccttgtttcctccttcctcctcttccccctt 51 ||||||||||||| ||||||||||||| |||| Sbjct: 32818 tccttgtttcctc-ttcctcctcttcctcctt 32848
>gb|AC092131.5| Homo sapiens chromosome 16 clone RP11-164F14, complete sequence Length = 168624 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 28 tcctccttcctcctcttccccctt 51 ||||||||||||||||||| |||| Sbjct: 109625 tcctccttcctcctcttcctcctt 109648
>gb|AC133589.24| Mus musculus chromosome 1, clone RP24-475M18, complete sequence Length = 167647 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 28 tcctccttcctcctcttccccctt 51 ||||||||||||||||||| |||| Sbjct: 37545 tcctccttcctcctcttcctcctt 37568 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 28 tcctccttcctcctcttccccctt 51 ||||||||||||||||||| |||| Sbjct: 37490 tcctccttcctcctcttcctcctt 37513
>gb|AC024901.29| Homo sapiens 12 BAC RP11-684M17 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 129638 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 26 tttcctccttcctcctcttc 45 |||||||||||||||||||| Sbjct: 94259 tttcctccttcctcctcttc 94278
>gb|AC137699.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0029K10, from chromosome 3, complete sequence Length = 135940 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 tcggcggcggcgtcgcggcg 152 |||||||||||||||||||| Sbjct: 16008 tcggcggcggcgtcgcggcg 15989
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 125 cgtcatcctcggcggcggcg 144 |||||||||||||||||||| Sbjct: 3354723 cgtcatcctcggcggcggcg 3354704
>dbj|AP005004.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0503B05 Length = 156814 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 133 tcggcggcggcgtcgcggcg 152 |||||||||||||||||||| Sbjct: 39649 tcggcggcggcgtcgcggcg 39668
>dbj|AK172963.1| Mus musculus mRNA for mKIAA0521 protein Length = 5277 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 486 ctcactgactttggcgtcca 505 |||||||||||||||||||| Sbjct: 175 ctcactgactttggcgtcca 156
>emb|BX647782.1|HSM807928 Homo sapiens mRNA; cDNA DKFZp686K2487 (from clone DKFZp686K2487) Length = 2624 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 24 tgtttcctccttcctcctcttccc 47 ||||||||||| |||||||||||| Sbjct: 980 tgtttcctcctccctcctcttccc 1003
>ref|XM_321326.2| Anopheles gambiae str. PEST ENSANGP00000013390 (ENSANGG00000010901), partial mRNA Length = 3387 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 cgtcatcctcggcggcggcg 144 |||||||||||||||||||| Sbjct: 3105 cgtcatcctcggcggcggcg 3124
>gb|U38348.1|CVU38348 Chlorobium vibrioforme f. thiosulfatophilum uroporphyrinogen III synthase (hemD) gene, partial cds; and porphobilinogen synthase (hemB) gene, complete cds Length = 2872 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 537 cgggaaattgatgacgccga 556 |||||||||||||||||||| Sbjct: 1250 cgggaaattgatgacgccga 1269
>dbj|AK110119.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-161-B05, full insert sequence Length = 3085 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 128 catcctcggcggcggcgtcg 147 |||||||||||||||||||| Sbjct: 2255 catcctcggcggcggcgtcg 2236
>emb|AL590764.3|HS1091N2 Homo sapiens chromosome X from PAC 1091N2, region GJB1-DXS559 map Xq13.1, complete sequence Length = 201197 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 24 tgtttcctccttcctcctcttccc 47 ||||||||||| |||||||||||| Sbjct: 22268 tgtttcctcctccctcctcttccc 22245
>dbj|AK066705.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013075F19, full insert sequence Length = 1327 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 tttcctccttcctcctcttc 45 |||||||||||||||||||| Sbjct: 628 tttcctccttcctcctcttc 609
>gb|BC002348.2| Homo sapiens nuclear transport factor 2, mRNA (cDNA clone MGC:8327 IMAGE:2819267), complete cds Length = 896 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 24 tgtttcctccttcctcctcttccc 47 ||||||||||| |||||||||||| Sbjct: 504 tgtttcctcctccctcctcttccc 527
>emb|AL442109.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: B1011H02, complete sequence Length = 40167 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 26 tttcctccttcctcctcttc 45 |||||||||||||||||||| Sbjct: 87 tttcctccttcctcctcttc 106
>gb|AE003797.3| Drosophila melanogaster chromosome 2R, section 53 of 73 of the complete sequence Length = 306854 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 124 acgtcatcctcggcggcggcgtcg 147 |||||||| ||||||||||||||| Sbjct: 134416 acgtcatcttcggcggcggcgtcg 134439
>gb|AC104197.14| Mus musculus chromosome 8, clone RP24-319N16, complete sequence Length = 195334 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 28 tcctccttcctcctcttccccctt 51 |||| ||||||||||||||||||| Sbjct: 144696 tccttcttcctcctcttccccctt 144719
>dbj|D26392.1|CUSMORE Cucumis sativus mRNA for monodehydroascorbate reductase, complete cds Length = 1499 Score = 40.1 bits (20), Expect = 7.6 Identities = 50/60 (83%) Strand = Plus / Plus Query: 213 tccaaggagtccgtggctccctatgagcgtcctgcactcagcaagggctacctctttccc 272 ||||||||| | || ||||| ||||||||||| || || ||||| | ||| ||||||||| Sbjct: 131 tccaaggaggcggttgctccttatgagcgtccagctcttagcaaagcctatctctttccc 190
>gb|AC118544.7| Mus musculus strain C57BL/6J chromosome 5 clone rp23-287c8, complete sequence Length = 205079 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 28 tcctccttcctcctcttccccctt 51 ||||||||||||||||||| |||| Sbjct: 185633 tcctccttcctcctcttcctcctt 185610
>gb|AC092498.8| Mus musculus strain C57BL/6J chromosome 9 clone rp23-21l18, complete sequence Length = 233208 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 ctccttcctcctcttccccc 49 |||||||||||||||||||| Sbjct: 184035 ctccttcctcctcttccccc 184016
>gb|AC159644.3| Mus musculus BAC clone RP23-358A18 from chromosome 12, complete sequence Length = 196310 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 27 ttcctccttcctcctcttcc 46 |||||||||||||||||||| Sbjct: 62779 ttcctccttcctcctcttcc 62760
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 ctcggcggcggcgtcgcggc 151 |||||||||||||||||||| Sbjct: 3866611 ctcggcggcggcgtcgcggc 3866592
>emb|AL662976.3|OSJN00177 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0074L08, complete sequence Length = 171551 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 26 tttcctccttcctcctcttc 45 |||||||||||||||||||| Sbjct: 141816 tttcctccttcctcctcttc 141835
>gb|AC115820.11| Mus musculus chromosome 8, clone RP23-479K9, complete sequence Length = 185977 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 28 tcctccttcctcctcttccccctt 51 |||| ||||||||||||||||||| Sbjct: 181034 tccttcttcctcctcttccccctt 181011
>gb|AC140243.2| Mus musculus BAC clone RP23-470F3 from 9, complete sequence Length = 201295 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 30 ctccttcctcctcttccccc 49 |||||||||||||||||||| Sbjct: 193196 ctccttcctcctcttccccc 193215
>gb|AC150682.2| Mus musculus BAC clone RP24-210N1 from 5, complete sequence Length = 164951 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 cctcctcttcccccttgctc 55 |||||||||||||||||||| Sbjct: 24948 cctcctcttcccccttgctc 24929
>gb|AC134893.4| Mus musculus BAC clone RP24-251N8 from 9, complete sequence Length = 166674 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 31 tccttcctcctcttccccct 50 |||||||||||||||||||| Sbjct: 45788 tccttcctcctcttccccct 45807
>ref|NM_133962.3| Mus musculus rho/rac guanine nucleotide exchange factor (GEF) 18 (Arhgef18), mRNA Length = 5300 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 486 ctcactgactttggcgtcca 505 |||||||||||||||||||| Sbjct: 1072 ctcactgactttggcgtcca 1053
>gb|AC147560.3| Mus musculus BAC clone RP23-451A8 from 9, complete sequence Length = 177220 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 ctccttcctcctcttccccc 49 |||||||||||||||||||| Sbjct: 169648 ctccttcctcctcttccccc 169629
>emb|AL845492.10| Mouse DNA sequence from clone RP23-222P7 on chromosome 2, complete sequence Length = 225684 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 28 tcctccttcctcctcttccccctt 51 |||| ||||||||||||||||||| Sbjct: 164531 tccttcttcctcctcttccccctt 164508
>emb|AL627238.15| Mouse DNA sequence from clone RP23-46M23 on chromosome 4, complete sequence Length = 210380 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 ttcctccttcctcctcttcc 46 |||||||||||||||||||| Sbjct: 177135 ttcctccttcctcctcttcc 177154
>gb|AC162033.11| Mus musculus chromosome 8, clone RP23-162M13, complete sequence Length = 217343 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 28 tcctccttcctcctcttccccctt 51 |||||||||||| ||||||||||| Sbjct: 101052 tcctccttcctcttcttccccctt 101029
>gb|AC171210.1| Mus musculus BAC clone RP23-36D15 from chromosome 7, complete sequence Length = 221010 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 32 ccttcctcctcttccccctt 51 |||||||||||||||||||| Sbjct: 138490 ccttcctcctcttccccctt 138471
>emb|AL928665.8| Mouse DNA sequence from clone RP23-294O23 on chromosome 2, complete sequence Length = 81950 Score = 40.1 bits (20), Expect = 7.6 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Minus Query: 28 tcctccttcctcctcttcccccttgctc 55 ||||||||| |||||||||||||||||| Sbjct: 50612 tcctccttc-tcctcttcccccttgctc 50586
>gb|AC165364.2| Mus musculus BAC clone RP23-75J20 from chromosome 3, complete sequence Length = 240679 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 28 tcctccttcctcctcttccccctt 51 ||||||||| |||||||||||||| Sbjct: 223583 tcctccttcttcctcttccccctt 223560
>gb|AC025622.3| Mus musculus chromosome 3, clone RP23-453M11, complete sequence Length = 182338 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 28 tcctccttcctcctcttccccctt 51 ||||||||| |||||||||||||| Sbjct: 63815 tcctccttcttcctcttccccctt 63792
>gb|AC153654.4| Mus musculus BAC clone RP23-457N11 from chromosome 12, complete sequence Length = 193547 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 tcctccttcctcctcttccc 47 |||||||||||||||||||| Sbjct: 128124 tcctccttcctcctcttccc 128143
>emb|AL645600.11| Mouse DNA sequence from clone RP23-396N4 on chromosome 11, complete sequence Length = 180286 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 ttcctccttcctcctcttcc 46 |||||||||||||||||||| Sbjct: 47813 ttcctccttcctcctcttcc 47832
>emb|AL031707.19|HS313F9 Human DNA sequence from clone LA16c-313F9 on chromosome 16. Contains four CpG islands, complete sequence Length = 28707 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 238 agcgtcctgcactcagcaag 257 |||||||||||||||||||| Sbjct: 16402 agcgtcctgcactcagcaag 16383
>emb|AL669981.11| Mouse DNA sequence from clone RP23-335B9 on chromosome 4, complete sequence Length = 222981 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 28 tcctccttcctcctcttccccctt 51 ||||||||||||||||||| |||| Sbjct: 161363 tcctccttcctcctcttcctcctt 161340
>emb|AL589661.21| Mouse DNA sequence from clone RP23-58B7 on chromosome 15, complete sequence Length = 241432 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 28 tcctccttcctcctcttccccctt 51 ||||||||||||||||||| |||| Sbjct: 57906 tcctccttcctcctcttcctcctt 57929
>emb|X07315.1|HSPP15 Human gene for PP15 (placental protein 15) Length = 894 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 24 tgtttcctccttcctcctcttccc 47 ||||||||||| |||||||||||| Sbjct: 509 tgtttcctcctccctcctcttccc 532
>emb|AL627086.22| Mouse DNA sequence from clone RP23-477P14 on chromosome 3, complete sequence Length = 106019 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 27 ttcctccttcctcctcttcc 46 |||||||||||||||||||| Sbjct: 86468 ttcctccttcctcctcttcc 86449 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,891,463 Number of Sequences: 3902068 Number of extensions: 4891463 Number of successful extensions: 123365 Number of sequences better than 10.0: 239 Number of HSP's better than 10.0 without gapping: 239 Number of HSP's successfully gapped in prelim test: 3 Number of HSP's that attempted gapping in prelim test: 121740 Number of HSP's gapped (non-prelim): 1622 length of query: 558 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 535 effective length of database: 17,143,297,704 effective search space: 9171664271640 effective search space used: 9171664271640 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
